(data stored in SCRATCH3701 zone)

SWISSPROT: D5E9J8_METMS

ID   D5E9J8_METMS            Unreviewed;       225 AA.
AC   D5E9J8;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 59.
DE   RecName: Full=DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350};
GN   Name=radB {ECO:0000256|HAMAP-Rule:MF_00350};
GN   OrderedLocusNames=Mmah_0317 {ECO:0000313|EMBL:ADE35849.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE35849.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE35849.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Involved in DNA repair and in homologous recombination. May
CC       regulate the cleavage reactions of the branch-structured DNA. Has a
CC       very weak ATPase activity that is not stimulated by DNA. Binds DNA but
CC       does not promote DNA strands exchange. {ECO:0000256|HAMAP-
CC       Rule:MF_00350}.
CC   -!- SIMILARITY: Belongs to the eukaryotic RecA-like protein family. RadB
CC       subfamily. {ECO:0000256|HAMAP-Rule:MF_00350}.
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DR   EMBL; CP001994; ADE35849.1; -; Genomic_DNA.
DR   RefSeq; WP_013036792.1; NC_014002.1.
DR   EnsemblBacteria; ADE35849; ADE35849; Mmah_0317.
DR   GeneID; 8982450; -.
DR   KEGG; mmh:Mmah_0317; -.
DR   eggNOG; arCOG00417; Archaea.
DR   eggNOG; COG0468; LUCA.
DR   HOGENOM; HOG000227630; -.
DR   KO; K04484; -.
DR   OMA; GKTNICL; -.
DR   OrthoDB; 93716at2157; -.
DR   BioCyc; MMAH547558:G1GHT-313-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008094; F:DNA-dependent ATPase activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-UniRule.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_00350; RadB; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR013632; DNA_recomb/repair_Rad51_C.
DR   InterPro; IPR011939; DNA_repair_and_recomb_RadB.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR020588; RecA_ATP-bd.
DR   Pfam; PF08423; Rad51; 1.
DR   PIRSF; PIRSF003336; RadB; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR02237; recomb_radB; 1.
DR   PROSITE; PS50162; RECA_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; D5E9J8.
DR   SWISS-2DPAGE; D5E9J8.
KW   ATP-binding {ECO:0000256|HAMAP-Rule:MF_00350};
KW   DNA damage {ECO:0000256|HAMAP-Rule:MF_00350,
KW   ECO:0000256|SAAS:SAAS00554563};
KW   DNA recombination {ECO:0000256|HAMAP-Rule:MF_00350};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00350};
KW   Nucleotide-binding {ECO:0000256|HAMAP-Rule:MF_00350};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059}.
FT   DOMAIN          4..164
FT                   /note="RECA_2"
FT                   /evidence="ECO:0000259|PROSITE:PS50162"
SQ   SEQUENCE   225 AA;  24977 MW;  B6325A56B46EF503 CRC64;
     MCNITDLLTS GCKPIDELLG GGFEPGVVTQ IYGESGSGKT NLCLQLAVYC VNNNKKAILV
     DTEAISPERF RQIAGENARE IAQNIIIYEP HSFEEQYSAI HEIEKISAQN IGLIIVDSAT
     AYYRFGLEDE EKSIRTRREL ANQIGYLHGL ARKRGIVVVI TNQVYSDIGT GKLKPVGGST
     VEHMSKTIIQ LERTGENKRK ANLLKHRSRP EGLSREFTIT QEGLK
//

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