(data stored in ACNUC1104 zone)

SWISSPROT: D5UPZ8_TSUPD

ID   D5UPZ8_TSUPD            Unreviewed;        80 AA.
AC   D5UPZ8;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   16-JAN-2019, entry version 38.
DE   SubName: Full=RNA-binding S4 domain protein {ECO:0000313|EMBL:ADG76766.1};
GN   OrderedLocusNames=Tpau_0112 {ECO:0000313|EMBL:ADG76766.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG76766.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG76766.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG76766.1; -; Genomic_DNA.
DR   RefSeq; WP_013124821.1; NC_014158.1.
DR   STRING; 521096.Tpau_0112; -.
DR   EnsemblBacteria; ADG76766; ADG76766; Tpau_0112.
DR   KEGG; tpr:Tpau_0112; -.
DR   eggNOG; ENOG41067SR; Bacteria.
DR   eggNOG; COG2501; LUCA.
DR   HOGENOM; HOG000074028; -.
DR   KO; K14761; -.
DR   OMA; DQFLKWA; -.
DR   OrthoDB; 2071059at2; -.
DR   BioCyc; TPAU521096:G1GKO-113-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   PROSITE; PS50889; S4; 1.
PE   4: Predicted;
DR   PRODOM; D5UPZ8.
DR   SWISS-2DPAGE; D5UPZ8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT   DOMAIN       21     78       S4 RNA-binding. {ECO:0000259|PROSITE:
FT                                PS50889}.
SQ   SEQUENCE   80 AA;  8431 MW;  4AA98E63C886DB65 CRC64;
     MLRHDGPVSE AIDVEISDEV IRLGQFLKLA GLIDSGAEAK GVIADGEVSV NGEVDTRRGR
     QLAVGDVVEV FGRSARVARG
//

If you have problems or comments...

PBIL Back to PBIL home page