(data stored in ACNUC1104 zone)

SWISSPROT: D5UQT5_TSUPD

ID   D5UQT5_TSUPD            Unreviewed;       302 AA.
AC   D5UQT5;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ADG76918.1};
GN   OrderedLocusNames=Tpau_0268 {ECO:0000313|EMBL:ADG76918.1}, Tpau_0272
GN   {ECO:0000313|EMBL:ADG76921.1}, Tpau_0279
GN   {ECO:0000313|EMBL:ADG76928.1}, Tpau_1648
GN   {ECO:0000313|EMBL:ADG78269.1}, Tpau_1666
GN   {ECO:0000313|EMBL:ADG78285.1}, Tpau_2473
GN   {ECO:0000313|EMBL:ADG79078.1}, Tpau_2606
GN   {ECO:0000313|EMBL:ADG79209.1}, Tpau_3218
GN   {ECO:0000313|EMBL:ADG79805.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG76918.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG76918.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213}, and DSM 20162
RC   {ECO:0000313|EMBL:ADG76918.1};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
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DR   EMBL; CP001966; ADG76918.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG76921.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG76928.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG78269.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG78285.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG79078.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG79209.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG79805.1; -; Genomic_DNA.
DR   EnsemblBacteria; ADG76918; ADG76918; Tpau_0268.
DR   EnsemblBacteria; ADG76921; ADG76921; Tpau_0272.
DR   EnsemblBacteria; ADG76928; ADG76928; Tpau_0279.
DR   EnsemblBacteria; ADG78269; ADG78269; Tpau_1648.
DR   EnsemblBacteria; ADG78285; ADG78285; Tpau_1666.
DR   EnsemblBacteria; ADG79078; ADG79078; Tpau_2473.
DR   EnsemblBacteria; ADG79209; ADG79209; Tpau_2606.
DR   EnsemblBacteria; ADG79805; ADG79805; Tpau_3218.
DR   KEGG; tpr:Tpau_0268; -.
DR   KEGG; tpr:Tpau_0272; -.
DR   KEGG; tpr:Tpau_0279; -.
DR   KEGG; tpr:Tpau_1648; -.
DR   KEGG; tpr:Tpau_1666; -.
DR   KEGG; tpr:Tpau_2473; -.
DR   KEGG; tpr:Tpau_2606; -.
DR   KEGG; tpr:Tpau_3218; -.
DR   eggNOG; ENOG4105DQ6; Bacteria.
DR   eggNOG; COG2801; LUCA.
DR   HOGENOM; HOG000023132; -.
DR   OMA; ALSCETY; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0032196; P:transposition; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; D5UQT5.
DR   SWISS-2DPAGE; D5UQT5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN      131    295       Integrase catalytic.
FT                                {ECO:0000259|PROSITE:PS50994}.
SQ   SEQUENCE   302 AA;  33105 MW;  B0E465CC9BE00D53 CRC64;
     MNRFQFVEDH KDAYGVKRLC QVIGIARSSF YAWLAAAQGR AARTAADSVL AGRIRVLQDP
     KQGGDRAYGA PRITADLNAG AAESERVNHK RVARVMREHG LAGIRLRKRV KTTVPDQSGR
     RFPDLIGRNF STGGPGRRYV GDITYLPIAD GSNLYLASVI DLGSRKLAGW SMATHMRTEL
     VENALRAAQR ERGTLAGAIF HSDHGSVYTS KAYTALCEHF GVTQSMGAIG SSADNALAES
     FNATLKRELL QGRPAFGDQA TAYRAVFRWA NRYNTRRRHS AIGNITPNTY ETAYRATLTQ
     AA
//

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