(data stored in ACNUC1104 zone)

SWISSPROT: D5UMQ3_TSUPD

ID   D5UMQ3_TSUPD            Unreviewed;       299 AA.
AC   D5UMQ3;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   11-DEC-2019, entry version 50.
DE   SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ADG80527.1};
GN   OrderedLocusNames=Tpau_0254 {ECO:0000313|EMBL:ADG76904.1}, Tpau_0277
GN   {ECO:0000313|EMBL:ADG76926.1}, Tpau_0300
GN   {ECO:0000313|EMBL:ADG76946.1}, Tpau_0378
GN   {ECO:0000313|EMBL:ADG77020.1}, Tpau_0384
GN   {ECO:0000313|EMBL:ADG77025.1}, Tpau_1004
GN   {ECO:0000313|EMBL:ADG77637.1}, Tpau_1429
GN   {ECO:0000313|EMBL:ADG78057.1}, Tpau_1438
GN   {ECO:0000313|EMBL:ADG78066.1}, Tpau_1485
GN   {ECO:0000313|EMBL:ADG78111.1}, Tpau_2706
GN   {ECO:0000313|EMBL:ADG79305.1}, Tpau_3955
GN   {ECO:0000313|EMBL:ADG80527.1}, Tpau_3958
GN   {ECO:0000313|EMBL:ADG80529.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC
OS   16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG80527.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Mikhailova N., Munk A.C., Brettin T., Detter J.C., Tapia R., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Jando M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG80527.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213}, and DSM 20162
RC   {ECO:0000313|EMBL:ADG80527.1};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M., Ivanova N.,
RA   Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Tapia R.,
RA   Han C., Land M., Hauser L., Chang Y.J., Jeffries C.D., Brettin T.,
RA   Yasawong M., Brambilla E.M., Rohde M., Sikorski J., Goker M., Detter J.C.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain (no.
RT   33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
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DR   EMBL; CP001966; ADG76904.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG76926.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG76946.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG77020.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG77025.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG77637.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG78057.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG78066.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG78111.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG79305.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG80527.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG80529.1; -; Genomic_DNA.
DR   EnsemblBacteria; ADG76904; ADG76904; Tpau_0254.
DR   EnsemblBacteria; ADG76926; ADG76926; Tpau_0277.
DR   EnsemblBacteria; ADG76946; ADG76946; Tpau_0300.
DR   EnsemblBacteria; ADG77020; ADG77020; Tpau_0378.
DR   EnsemblBacteria; ADG77025; ADG77025; Tpau_0384.
DR   EnsemblBacteria; ADG77637; ADG77637; Tpau_1004.
DR   EnsemblBacteria; ADG78057; ADG78057; Tpau_1429.
DR   EnsemblBacteria; ADG78066; ADG78066; Tpau_1438.
DR   EnsemblBacteria; ADG78111; ADG78111; Tpau_1485.
DR   EnsemblBacteria; ADG79305; ADG79305; Tpau_2706.
DR   EnsemblBacteria; ADG80527; ADG80527; Tpau_3955.
DR   EnsemblBacteria; ADG80529; ADG80529; Tpau_3958.
DR   KEGG; tpr:Tpau_0254; -.
DR   KEGG; tpr:Tpau_0277; -.
DR   KEGG; tpr:Tpau_0300; -.
DR   KEGG; tpr:Tpau_0378; -.
DR   KEGG; tpr:Tpau_0384; -.
DR   KEGG; tpr:Tpau_1004; -.
DR   KEGG; tpr:Tpau_1429; -.
DR   KEGG; tpr:Tpau_1438; -.
DR   KEGG; tpr:Tpau_1485; -.
DR   KEGG; tpr:Tpau_2706; -.
DR   KEGG; tpr:Tpau_3955; -.
DR   KEGG; tpr:Tpau_3958; -.
DR   eggNOG; ENOG4107TIM; Bacteria.
DR   eggNOG; COG2801; LUCA.
DR   HOGENOM; HOG000023132; -.
DR   OMA; GITASHH; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; D5UMQ3.
DR   SWISS-2DPAGE; D5UMQ3.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN          129..292
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   299 AA;  33897 MW;  A72DB5BA171D9310 CRC64;
     MYPLVKELAD DGVPVTVSCR VLKLSRQPYY RWLAAPVPAT ELVEAYRANA LFDASVDDPE
     FGHRLLADEA RAAGEPMADR TAWRICRDNR WWSVFGKKRS SKGGKPGPAV HDDLCTVTDE
     HGRTRHRFTA DAPNRLWLTD ITEHRAREGK LYLCAIKDAY SGRIVGYSVD SRMKARLAVN
     ALNNAVAMRG DVTGCIVHSD RGSQFRSRKF RRALEYHGLR GSMGRVASCG DNAAMESFFS
     LLQNNVLDRH CWATRQELRT AIITWIERTY HRRRRQRRLG RLTPIAFEST MNPAAPHAA
//

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