(data stored in ACNUC1104 zone)

SWISSPROT: D5UR87_TSUPD

ID   D5UR87_TSUPD            Unreviewed;       428 AA.
AC   D5UR87;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   11-DEC-2019, entry version 42.
DE   RecName: Full=Mutator family transposase {ECO:0000256|RuleBase:RU365089};
GN   OrderedLocusNames=Tpau_0323 {ECO:0000313|EMBL:ADG76967.1}, Tpau_2471
GN   {ECO:0000313|EMBL:ADG79076.1}, Tpau_4268
GN   {ECO:0000313|EMBL:ADG80834.1}, Tpau_4287
GN   {ECO:0000313|EMBL:ADG80853.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC
OS   16120 / NCTC 13040) (Corynebacterium paurometabolum).
OG   Plasmid pTpau01 {ECO:0000313|EMBL:ADG80834.1,
OG   ECO:0000313|Proteomes:UP000001213}.
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG79076.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Mikhailova N., Munk A.C., Brettin T., Detter J.C., Tapia R., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Jando M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RC   PLASMID=Plasmid pTpau01 {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Mikhailova N., Munk A.C., Brettin T., Detter J.C., Tapia R., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Jando M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete plasmid of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:ADG79076.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213}, and DSM 20162
RC   {ECO:0000313|EMBL:ADG79076.1};
RC   PLASMID=Plasmid pTpau01 {ECO:0000313|Proteomes:UP000001213}, and
RC   pTpau01 {ECO:0000313|EMBL:ADG80834.1};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M., Ivanova N.,
RA   Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Tapia R.,
RA   Han C., Land M., Hauser L., Chang Y.J., Jeffries C.D., Brettin T.,
RA   Yasawong M., Brambilla E.M., Rohde M., Sikorski J., Goker M., Detter J.C.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain (no.
RT   33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -!- FUNCTION: Required for the transposition of the insertion element.
CC       {ECO:0000256|RuleBase:RU365089}.
CC   -!- SIMILARITY: Belongs to the transposase mutator family.
CC       {ECO:0000256|RuleBase:RU365089}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001966; ADG76967.1; -; Genomic_DNA.
DR   EMBL; CP001966; ADG79076.1; -; Genomic_DNA.
DR   EMBL; CP001967; ADG80834.1; -; Genomic_DNA.
DR   EMBL; CP001967; ADG80853.1; -; Genomic_DNA.
DR   RefSeq; WP_013125013.1; NC_014159.1.
DR   STRING; 521096.Tpau_4287; -.
DR   EnsemblBacteria; ADG76967; ADG76967; Tpau_0323.
DR   EnsemblBacteria; ADG79076; ADG79076; Tpau_2471.
DR   EnsemblBacteria; ADG80834; ADG80834; Tpau_4268.
DR   EnsemblBacteria; ADG80853; ADG80853; Tpau_4287.
DR   KEGG; tpr:Tpau_0323; -.
DR   KEGG; tpr:Tpau_2471; -.
DR   KEGG; tpr:Tpau_4268; -.
DR   KEGG; tpr:Tpau_4287; -.
DR   eggNOG; ENOG4105D5G; Bacteria.
DR   eggNOG; COG3328; LUCA.
DR   HOGENOM; HOG000103025; -.
DR   OMA; NTVEGYH; -.
DR   OrthoDB; 792870at2; -.
DR   BioCyc; TPAU521096:G1GKO-2457-MONOMER; -.
DR   BioCyc; TPAU521096:G1GKO-307-MONOMER; -.
DR   BioCyc; TPAU521096:G1GKO-4258-MONOMER; -.
DR   BioCyc; TPAU521096:G1GKO-4280-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004803; F:transposase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006313; P:transposition, DNA-mediated; IEA:UniProtKB-UniRule.
DR   InterPro; IPR001207; Transposase_mutator.
DR   PANTHER; PTHR33217; PTHR33217; 1.
DR   Pfam; PF00872; Transposase_mut; 1.
DR   PROSITE; PS01007; TRANSPOSASE_MUTATOR; 1.
PE   3: Inferred from homology;
DR   PRODOM; D5UR87.
DR   SWISS-2DPAGE; D5UR87.
KW   DNA recombination {ECO:0000256|RuleBase:RU365089};
KW   DNA-binding {ECO:0000256|RuleBase:RU365089};
KW   Plasmid {ECO:0000313|EMBL:ADG80834.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213};
KW   Transposable element {ECO:0000256|RuleBase:RU365089};
KW   Transposition {ECO:0000256|RuleBase:RU365089}.
SQ   SEQUENCE   428 AA;  47863 MW;  41DB51A03865C2DA CRC64;
     MTETLHVMDD GRQPTEQELQ LARELVAQAR EQGASMSAPG MLRALTKTML ETALDEEITE
     HLGYDKHHIE GRGSGNSRNG ARTKTVITET VGPIEIEVPR DREGSFDPKI VAKHQRRLNG
     VDEIVLSLAA RGLTSGDIVA HFDQIYGASI SKDTISRITD KIVEEMTGWF NRPLEPIYVA
     VFIDALHIKV RDGQVANRPF YAAIGVDLDG HKDVLGIWAG EGGGESAKFW YAVLSSLKSR
     GVNDVFFLVC DGLKGLPASV AAVWPETIVQ TCVIHLLRNS FKYVPRQHWD TLKRDLKPIY
     TAIDATAAEA ALDALDDTWG QKYPTMIRLW RNAWDEFIPF LDYNIEVRRV LYSTNAIESL
     NARYRRAVKA RGHFPTEQAA LKTLYLVTRA LDPSGRGQNR WAARWKPALN AFAITFADRI
     PGLNRDQG
//

If you have problems or comments...

PBIL Back to PBIL home page