(data stored in ACNUC1104 zone)

SWISSPROT: D5USB2_TSUPD

ID   D5USB2_TSUPD            Unreviewed;       404 AA.
AC   D5USB2;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   16-JAN-2019, entry version 36.
DE   SubName: Full=HNH nuclease {ECO:0000313|EMBL:ADG77179.1};
GN   OrderedLocusNames=Tpau_0538 {ECO:0000313|EMBL:ADG77179.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG77179.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG77179.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG77179.1; -; Genomic_DNA.
DR   RefSeq; WP_013125221.1; NC_014158.1.
DR   STRING; 521096.Tpau_0538; -.
DR   EnsemblBacteria; ADG77179; ADG77179; Tpau_0538.
DR   KEGG; tpr:Tpau_0538; -.
DR   eggNOG; ENOG4108PJT; Bacteria.
DR   eggNOG; ENOG410ZI39; LUCA.
DR   HOGENOM; HOG000241757; -.
DR   OMA; NALVHEM; -.
DR   OrthoDB; 1843957at2; -.
DR   BioCyc; TPAU521096:G1GKO-521-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd00085; HNHc; 1.
DR   InterPro; IPR003870; DUF222.
DR   InterPro; IPR002711; HNH.
DR   InterPro; IPR003615; HNH_nuc.
DR   Pfam; PF02720; DUF222; 1.
DR   Pfam; PF01844; HNH; 1.
DR   SMART; SM00507; HNHc; 1.
PE   4: Predicted;
DR   PRODOM; D5USB2.
DR   SWISS-2DPAGE; D5USB2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN      314    364       HNHc. {ECO:0000259|SMART:SM00507}.
SQ   SEQUENCE   404 AA;  42708 MW;  89DEB34FF64E59DE CRC64;
     MEVEDVSSSA AGGEVIAGLG ELERLRARVV FNQYRLIVEL LRTRVCERIA AGVAQERWEA
     GVASEVALAL RVSPHRATAM LSRAKTLERD LPATLSRLRD GDISPEAVEV IVAGVSHLEP
     RLKGEADTVL CGEGFAASGL GLKRLQDRVK EVSYQLDAQA TVDRAALAAK DRRVTIRPAP
     DCMARVSILL PVAQAVGLYA AVKTAADSVF GTPGESRSRG QIMADTAFAR ITGRDAADGV
     PVTVNLTMPA TVLLGEESGI AHLTGGGTLP AEIARHLVGR ASEKAIGWVK RLYVQPDSGA
     VVGLDSRSRL FPAGLAELIA ARDRYCRTPY CDAPIAHTDH ITAHAHGGAT SLHNGQGLCA
     ACNYAKEAAG WSSRTVDDPS GRHTVETRTP TGHLHRSTAP PHAA
//

If you have problems or comments...

PBIL Back to PBIL home page