(data stored in ACNUC1104 zone)

SWISSPROT: D5USB6_TSUPD

ID   D5USB6_TSUPD            Unreviewed;       388 AA.
AC   D5USB6;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   08-MAY-2019, entry version 42.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADG77183.1};
GN   OrderedLocusNames=Tpau_0543 {ECO:0000313|EMBL:ADG77183.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /
OS   NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).
OC   Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG77183.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA   Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C.,
RA   Tapia R., Han C., Larimer F., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E.,
RA   Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG77183.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M.,
RA   Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A.,
RA   Palaniappan K., Tapia R., Han C., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Yasawong M., Brambilla E.M., Rohde M.,
RA   Sikorski J., Goker M., Detter J.C., Woyke T., Bristow J., Eisen J.A.,
RA   Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain
RT   (no. 33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001966; ADG77183.1; -; Genomic_DNA.
DR   RefSeq; WP_013125225.1; NC_014158.1.
DR   STRING; 521096.Tpau_0543; -.
DR   EnsemblBacteria; ADG77183; ADG77183; Tpau_0543.
DR   KEGG; tpr:Tpau_0543; -.
DR   eggNOG; ENOG4105E0Y; Bacteria.
DR   eggNOG; COG1690; LUCA.
DR   HOGENOM; HOG000220066; -.
DR   KO; K14415; -.
DR   OMA; QQYARWN; -.
DR   OrthoDB; 1384936at2; -.
DR   BioCyc; TPAU521096:G1GKO-526-MONOMER; -.
DR   Proteomes; UP000001213; Chromosome.
DR   GO; GO:0008452; F:RNA ligase activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 3.90.1860.10; -; 1.
DR   InterPro; IPR001233; RtcB.
DR   InterPro; IPR036025; RtcB-like_sf.
DR   Pfam; PF01139; RtcB; 1.
DR   SUPFAM; SSF103365; SSF103365; 1.
PE   4: Predicted;
DR   PRODOM; D5USB6.
DR   SWISS-2DPAGE; D5USB6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
SQ   SEQUENCE   388 AA;  42800 MW;  9547705B21AEF111 CRC64;
     MEKISKSLVS WASILDEKTR EQAITTAKLP FIYPHIALMP DAHLGKGATV GSVIPSLGAV
     IPAAVGVDIG CGMIAVRTQF TKSDLPDDRA TVREAIERAV PLSPGRYNTK VVATAEPRIA
     ELIALAERAE FDPAQYAGNW ALQLGTLGGG NHFIEISLDE DDTVWAFLHS GSRGVGNKIA
     QQHIAVATRL CRQWWIDLPD PDLAYLVEGT PEFRRYIAEL KWAQHFALLN REEMMDRVIR
     QLGEWVGTPV SEAERINCHH NFTKREKHFG KEVWVSRKGA IEAAEGKLGL IPGSMGTASY
     IVEGRGFPPS LNSSPHGAGR EYSRSAARRT FTHEQLREAM AGIEFRDSAD FVDEIPQAYK
     PIDRVMTDAA ELVTVRAVLR QIVNVKGQ
//

If you have problems or comments...

PBIL Back to PBIL home page