(data stored in ACNUC7421 zone)

SWISSPROT: D6ZA97_SEGRD

ID   D6ZA97_SEGRD            Unreviewed;       218 AA.
AC   D6ZA97;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 48.
DE   RecName: Full=50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328};
GN   Name=rplD {ECO:0000256|HAMAP-Rule:MF_01328};
GN   OrderedLocusNames=Srot_0150 {ECO:0000313|EMBL:ADG96639.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96639.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96639.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -!- FUNCTION: Forms part of the polypeptide exit tunnel.
CC       {ECO:0000256|HAMAP-Rule:MF_01328}.
CC   -!- FUNCTION: One of the primary rRNA binding proteins, this protein
CC       initially binds near the 5'-end of the 23S rRNA. It is important
CC       during the early stages of 50S assembly. It makes multiple
CC       contacts with different domains of the 23S rRNA in the assembled
CC       50S subunit and ribosome. {ECO:0000256|HAMAP-Rule:MF_01328}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01328}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01328}.
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DR   EMBL; CP001958; ADG96639.1; -; Genomic_DNA.
DR   RefSeq; WP_013137095.1; NC_014168.1.
DR   STRING; 640132.Srot_0150; -.
DR   EnsemblBacteria; ADG96639; ADG96639; Srot_0150.
DR   KEGG; srt:Srot_0150; -.
DR   eggNOG; ENOG4106U5A; Bacteria.
DR   eggNOG; COG0088; LUCA.
DR   HOGENOM; HOG000248767; -.
DR   KO; K02926; -.
DR   OMA; GAGRKPF; -.
DR   OrthoDB; 1572673at2; -.
DR   BioCyc; SROT640132:G1GLH-154-MONOMER; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.40.1370.10; -; 1.
DR   HAMAP; MF_01328_B; Ribosomal_L4_B; 1.
DR   InterPro; IPR002136; Ribosomal_L4/L1e.
DR   InterPro; IPR023574; Ribosomal_L4_dom_sf.
DR   InterPro; IPR013005; Ribosomal_uL4/L1e.
DR   PANTHER; PTHR10746; PTHR10746; 1.
DR   Pfam; PF00573; Ribosomal_L4; 1.
DR   SUPFAM; SSF52166; SSF52166; 1.
DR   TIGRFAMs; TIGR03953; rplD_bact; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZA97.
DR   SWISS-2DPAGE; D6ZA97.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01328};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01328,
KW   ECO:0000313|EMBL:ADG96639.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01328};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01328}.
SQ   SEQUENCE   218 AA;  23350 MW;  8F368C9551FA8C55 CRC64;
     MSLTVTIHAA DGKSAGTFDL PAEIFDAPAN ISLLHQVVTA QLAAARQGTH KVKTRGEVSG
     GGRKPYKQKG TGRARQGSTR APHFTGGGTV HGPVPRDYSQ RTPKKMKAAA LRGALSDRAR
     GGRVHIVDEL VAGQSPSTKK ASAFLDSIAS RPRLLVVLGR ADETGLKSVR NLPHAHILTP
     DQLNTYDVLK SDDIVFSLEA LTTFIEHHKV NKKEEVQA
//

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