(data stored in ACNUC7421 zone)

SWISSPROT: D6ZB25_SEGRD

ID   D6ZB25_SEGRD            Unreviewed;       232 AA.
AC   D6ZB25;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG96784.1};
GN   OrderedLocusNames=Srot_0297 {ECO:0000313|EMBL:ADG96784.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96784.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96784.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001958; ADG96784.1; -; Genomic_DNA.
DR   RefSeq; WP_013137240.1; NC_014168.1.
DR   STRING; 640132.Srot_0297; -.
DR   EnsemblBacteria; ADG96784; ADG96784; Srot_0297.
DR   KEGG; srt:Srot_0297; -.
DR   eggNOG; ENOG4108R7M; Bacteria.
DR   eggNOG; ENOG4111NIH; LUCA.
DR   OMA; VYHYFPG; -.
DR   OrthoDB; 1437290at2; -.
DR   BioCyc; SROT640132:G1GLH-299-MONOMER; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; D6ZB25.
DR   SWISS-2DPAGE; D6ZB25.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       28     88       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     51     70       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   232 AA;  25066 MW;  124E3953F9FD71FD CRC64;
     MGFAMTRKVP SVPVTPAKKP TARARQAAQT RDRILEAAVQ CFSEAAYEEV AVSDIAKAAG
     VAHGLLFHYF GSKRGMYLEA MRVAAQQLEA SFVFEPDLEP LEQARRAVAS HLRFLAAHRG
     MALRLILGGR GADPAAWEVF EAARWRAVEA TAALFGVDSQ RPATRMACRA AVGAMDEAAV
     FWLHNDQLFA VDDMAEWMVA MVASVVRAAI RLDPGMGVED ALSVIDGQLP PG
//

If you have problems or comments...

PBIL Back to PBIL home page