(data stored in ACNUC7421 zone)

SWISSPROT: D6ZC18_SEGRD

ID   D6ZC18_SEGRD            Unreviewed;       209 AA.
AC   D6ZC18;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 52.
DE   RecName: Full=50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00719970};
DE   AltName: Full=General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00719974};
GN   Name=rplY {ECO:0000256|HAMAP-Rule:MF_01334};
GN   Synonyms=ctc {ECO:0000256|HAMAP-Rule:MF_01334};
GN   OrderedLocusNames=Srot_0511 {ECO:0000313|EMBL:ADG96995.1};
OS   Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /
OS   DSM 44985 / JCM 13578).
OC   Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae;
OC   Segniliparus.
OX   NCBI_TaxID=640132 {ECO:0000313|EMBL:ADG96995.1, ECO:0000313|Proteomes:UP000002247};
RN   [1] {ECO:0000313|EMBL:ADG96995.1, ECO:0000313|Proteomes:UP000002247}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578
RC   {ECO:0000313|Proteomes:UP000002247};
RX   PubMed=21304703; DOI=10.4056/sigs.791633;
RA   Sikorski J., Lapidus A., Copeland A., Misra M., Glavina Del Rio T.,
RA   Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Jando M.,
RA   Schneider S., Bruce D., Goodwin L., Pitluck S., Liolios K.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chertkov O., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Brettin T., Detter J.C., Han C., Rohde M., Goker M.,
RA   Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA   Klenk H.P.;
RT   "Complete genome sequence of Segniliparus rotundus type strain (CDC
RT   1076).";
RL   Stand. Genomic Sci. 2:203-211(2010).
CC   -!- FUNCTION: This is one of the proteins that binds to the 5S RNA in
CC       the ribosome where it forms part of the central protuberance.
CC       {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00720025}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S
CC       rRNA independently of L5 and L18. {ECO:0000256|HAMAP-
CC       Rule:MF_01334, ECO:0000256|SAAS:SAAS00719991}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL25
CC       family. CTC subfamily. {ECO:0000256|HAMAP-Rule:MF_01334,
CC       ECO:0000256|SAAS:SAAS00804041}.
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DR   EMBL; CP001958; ADG96995.1; -; Genomic_DNA.
DR   RefSeq; WP_013137451.1; NC_014168.1.
DR   STRING; 640132.Srot_0511; -.
DR   EnsemblBacteria; ADG96995; ADG96995; Srot_0511.
DR   KEGG; srt:Srot_0511; -.
DR   eggNOG; ENOG4107XT7; Bacteria.
DR   eggNOG; COG1825; LUCA.
DR   HOGENOM; HOG000214908; -.
DR   KO; K02897; -.
DR   OMA; GDSIHIS; -.
DR   OrthoDB; 1673077at2; -.
DR   BioCyc; SROT640132:G1GLH-514-MONOMER; -.
DR   Proteomes; UP000002247; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0008097; F:5S rRNA binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00495; Ribosomal_L25_TL5_CTC; 1.
DR   Gene3D; 2.170.120.20; -; 1.
DR   Gene3D; 2.40.240.10; -; 1.
DR   HAMAP; MF_01334; Ribosomal_L25_CTC; 1.
DR   InterPro; IPR020056; Rbsml_L25/Gln-tRNA_synth_N.
DR   InterPro; IPR029751; Ribosomal_L25.
DR   InterPro; IPR011035; Ribosomal_L25/Gln-tRNA_synth.
DR   InterPro; IPR020057; Ribosomal_L25_b-dom.
DR   InterPro; IPR037121; Ribosomal_L25_C.
DR   InterPro; IPR001021; Ribosomal_L25_long.
DR   Pfam; PF01386; Ribosomal_L25p; 1.
DR   Pfam; PF14693; Ribosomal_TL5_C; 1.
DR   ProDom; PD012503; Ribosomal_L25; 1.
DR   SUPFAM; SSF50715; SSF50715; 1.
DR   TIGRFAMs; TIGR00731; bL25_bact_ctc; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZC18.
DR   SWISS-2DPAGE; D6ZC18.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002247};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002247};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01334,
KW   ECO:0000256|SAAS:SAAS01080237};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01334,
KW   ECO:0000256|SAAS:SAAS01080247};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01334,
KW   ECO:0000256|SAAS:SAAS01080250};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01334,
KW   ECO:0000256|SAAS:SAAS01080251}.
FT   DOMAIN      102    180       Ribosomal_TL5_C. {ECO:0000259|Pfam:
FT                                PF14693}.
SQ   SEQUENCE   209 AA;  22268 MW;  FE1C86190B8FE7C4 CRC64;
     MAETARVEAT VRDEFGKGAS RRARRDGHVP AVLYGHGIDP KHFNIPAKEF ARVLRANGVN
     AIVSLHAGGE EHLALTKTVV VHPTKSYLQH VDLQVIRRGE RIAVDVPVVL TGSAASGSVV
     QHETTTLSVE AEAMHIPEQI EVSIEGLEIG SKIIASELEL PEAVSLTGDP EQMIVQINEA
     RAAQVEQDSA EGSDEAEADS SAEDGGEES
//

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