(data stored in ACNUC30630 zone)

SWISSPROT: D6ZUQ2_BIFLJ

ID   D6ZUQ2_BIFLJ            Unreviewed;       451 AA.
AC   D6ZUQ2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   11-DEC-2019, entry version 50.
DE   SubName: Full=Integrase, catalytic region {ECO:0000313|EMBL:ADH00608.1};
GN   OrderedLocusNames=BLJ_0134 {ECO:0000313|EMBL:ADG99627.1}, BLJ_1156
GN   {ECO:0000313|EMBL:ADH00608.1};
OS   Bifidobacterium longum subsp. longum (strain JDM301).
OC   Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
OC   Bifidobacterium.
OX   NCBI_TaxID=759350 {ECO:0000313|EMBL:ADH00608.1, ECO:0000313|Proteomes:UP000006740};
RN   [1] {ECO:0000313|EMBL:ADH00608.1, ECO:0000313|Proteomes:UP000006740}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JDM301 {ECO:0000313|EMBL:ADH00608.1,
RC   ECO:0000313|Proteomes:UP000006740};
RX   PubMed=20525832; DOI=10.1128/JB.00538-10;
RA   Wei Y.X., Zhang Z.Y., Liu C., Zhu Y.Z., Zhu Y.Q., Zheng H., Zhao G.P.,
RA   Wang S., Guo X.K.;
RT   "Complete genome sequence of Bifidobacterium longum JDM301.";
RL   J. Bacteriol. 192:4076-4077(2010).
RN   [2] {ECO:0000313|EMBL:ADH00608.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=JDM301 {ECO:0000313|EMBL:ADH00608.1};
RA   Wei Y., Zhang Z., Liu C., Zhu Y., Zhu Y., Zheng H., Zhao G., Wang S.,
RA   Guo X.;
RL   Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP002010; ADG99627.1; -; Genomic_DNA.
DR   EMBL; CP002010; ADH00608.1; -; Genomic_DNA.
DR   RefSeq; WP_013140061.1; NC_014169.1.
DR   EnsemblBacteria; ADG99627; ADG99627; BLJ_0134.
DR   EnsemblBacteria; ADH00608; ADH00608; BLJ_1156.
DR   KEGG; bll:BLJ_0134; -.
DR   KEGG; bll:BLJ_1156; -.
DR   HOGENOM; HOG000023133; -.
DR   OMA; VISWSIG; -.
DR   OrthoDB; 1637053at2; -.
DR   BioCyc; BLON759350:G1GKT-1214-MONOMER; -.
DR   BioCyc; BLON759350:G1GKT-153-MONOMER; -.
DR   Proteomes; UP000006740; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; D6ZUQ2.
DR   SWISS-2DPAGE; D6ZUQ2.
KW   Coiled coil {ECO:0000256|SAM:Coils}.
FT   DOMAIN          284..448
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   COILED          121..141
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   451 AA;  51709 MW;  75DDBA296A421406 CRC64;
     MFSMEDRRRA VDLYFTEGMT IRKVIAELGY PSEGALVKWV REDPRYTGAC RRSYTLECKT
     NAARRALEGE PLARVARDAG CTPTSVYQWM RRYRSEGILG LMDRRNAPMP AEPMPAAGDD
     VEELRRQVEV LRLENAVMRE TIDVLKADDP RLDPSMLTNR ERTRVVDAIR GEFGLAACLK
     AVGLKRSTYY YERGAIAAGD RYAVLRARVA GLFEQGGRAW GYRTIHRMLR LDESDPIVVS
     EKVVRRIMRE GAMRPVYLKR PKRWSSYAGE IGEAPANLVE RDFHADAPNM LWVTDVTQFT
     MDGYKCWLSP VVDCFDGMVV SWTLSRSPNA DMANRMLLDA VATLRDGEHP IIHSDRGCHY
     RWNEWIRICE EHGLIRSMSA KGCSPDNAAA EGFFGRLKNE LFYGRDWRGV GYEEFRERLA
     AYLTHYNETR IKKSLDWMSP VQYRRSLGLA A
//

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