(data stored in ACNUC1104 zone)

SWISSPROT: D6ZZY6_STAND

ID   D6ZZY6_STAND            Unreviewed;       477 AA.
AC   D6ZZY6;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-MAY-2019, entry version 42.
DE   SubName: Full=Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ADH87400.1};
GN   OrderedLocusNames=Snov_0063 {ECO:0000313|EMBL:ADH87400.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87400.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87400.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000256|PIRSR:PIRSR602129-50,
CC         ECO:0000256|RuleBase:RU000382};
CC   -!- SIMILARITY: Belongs to the group II decarboxylase family.
CC       {ECO:0000256|RuleBase:RU000382}.
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DR   EMBL; CP002026; ADH87400.1; -; Genomic_DNA.
DR   RefSeq; WP_013164905.1; NC_014217.1.
DR   STRING; 639283.Snov_0063; -.
DR   EnsemblBacteria; ADH87400; ADH87400; Snov_0063.
DR   KEGG; sno:Snov_0063; -.
DR   eggNOG; ENOG4107RHU; Bacteria.
DR   eggNOG; COG0076; LUCA.
DR   HOGENOM; HOG000121943; -.
DR   OMA; NVWIHVD; -.
DR   OrthoDB; 1478871at2; -.
DR   BioCyc; SNOV639283:G1GLM-63-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0016831; F:carboxy-lyase activity; IEA:InterPro.
DR   GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR   GO; GO:0019752; P:carboxylic acid metabolic process; IEA:InterPro.
DR   Gene3D; 3.40.640.10; -; 1.
DR   InterPro; IPR002129; PyrdxlP-dep_de-COase.
DR   InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR   InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR   Pfam; PF00282; Pyridoxal_deC; 1.
DR   SUPFAM; SSF53383; SSF53383; 1.
PE   3: Inferred from homology;
DR   PRODOM; D6ZZY6.
DR   SWISS-2DPAGE; D6ZZY6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Lyase {ECO:0000256|RuleBase:RU000382};
KW   Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR602129-50,
KW   ECO:0000256|RuleBase:RU000382};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633}.
FT   MOD_RES     296    296       N6-(pyridoxal phosphate)lysine.
FT                                {ECO:0000256|PIRSR:PIRSR602129-50}.
SQ   SEQUENCE   477 AA;  50274 MW;  13A8CC93646EF306 CRC64;
     MLAKNEEREA TRALLASAAR HASAFRAADP LRHAPSFTYE EAVVAFDGAL SEEGEPAGEV
     LDDLVRRAGP GLSATTGPRF FGWVIGGSHP VGLAADWLTA AWGQNAANHV AAPAAAAAET
     VAARWLLDVL RLPEEASVGF VTGATMANFV GLAAARGEVL RRVGWDVEED GLAGAPPVRV
     VIGDDAHASV FSALQYLGFG RSNLIRVATD AQGAMRADAF ERALPESGPV IVVTQAGQIN
     TGAFDPHEAI VPLAKARGAW VHVDGAFGLW ARACPKKADL AAGVELADSW ATDGHKWLQT
     PYDCGYAIVR DAEAHRRAMT IAASYLPPVS GTERDPSHYV PELSRRARGF ATWALLRHLG
     RAGVAAMVAA NCEQARLMAE LLRAEPGIAV LNEVVLNQVL LRFGAEADDA AGDALTLATI
     SAIQAEGTCF AGGAKWRGRW AMRISVSNAV TTQEDIRLSA EAIIRCWRSV ASSAARG
//

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