(data stored in ACNUC1104 zone)

SWISSPROT: D7A2W8_STAND

ID   D7A2W8_STAND            Unreviewed;       197 AA.
AC   D7A2W8;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 43.
DE   RecName: Full=Ribosome hibernation promoting factor {ECO:0000256|HAMAP-Rule:MF_00839};
DE            Short=HPF {ECO:0000256|HAMAP-Rule:MF_00839};
GN   Name=hpf {ECO:0000256|HAMAP-Rule:MF_00839};
GN   OrderedLocusNames=Snov_0353 {ECO:0000313|EMBL:ADH87686.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87686.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87686.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -!- FUNCTION: Required for dimerization of active 70S ribosomes into
CC       100S ribosomes in stationary phase; 100S ribosomes are
CC       translationally inactive and sometimes present during exponential
CC       growth. {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SUBUNIT: Interacts with 100S ribosomes. {ECO:0000256|HAMAP-
CC       Rule:MF_00839}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SIMILARITY: Belongs to the HPF/YfiA ribosome-associated protein
CC       family. Long HPF subfamily. {ECO:0000256|HAMAP-Rule:MF_00839}.
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DR   EMBL; CP002026; ADH87686.1; -; Genomic_DNA.
DR   STRING; 639283.Snov_0353; -.
DR   EnsemblBacteria; ADH87686; ADH87686; Snov_0353.
DR   KEGG; sno:Snov_0353; -.
DR   eggNOG; ENOG4107TNS; Bacteria.
DR   eggNOG; COG1544; LUCA.
DR   HOGENOM; HOG000074926; -.
DR   OMA; RRLKDHH; -.
DR   BioCyc; SNOV639283:G1GLM-357-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00552; RaiA; 1.
DR   Gene3D; 3.30.160.100; -; 1.
DR   Gene3D; 3.30.505.50; -; 1.
DR   HAMAP; MF_00839; HPF; 1.
DR   InterPro; IPR034694; HPF_long/plastid.
DR   InterPro; IPR036567; RHF-like.
DR   InterPro; IPR003489; RHF/RaiA.
DR   InterPro; IPR032528; Ribosom_S30AE_C.
DR   InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR   Pfam; PF16321; Ribosom_S30AE_C; 1.
DR   Pfam; PF02482; Ribosomal_S30AE; 1.
DR   SUPFAM; SSF69754; SSF69754; 1.
DR   TIGRFAMs; TIGR00741; yfiA; 1.
PE   3: Inferred from homology;
DR   PRODOM; D7A2W8.
DR   SWISS-2DPAGE; D7A2W8.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Translation regulation {ECO:0000256|HAMAP-Rule:MF_00839}.
FT   DOMAIN      131    183       Ribosom_S30AE_C. {ECO:0000259|Pfam:
FT                                PF16321}.
FT   COILED       73     93       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   197 AA;  21298 MW;  A79B4A903252ED10 CRC64;
     MPLRVSGKNI DVGEALRQRV ADRVAGAMGK YFDGGWSGHV TVAREGSGYR SDCALHLDSG
     TILQAHADAQ DPYSSADAAV ERIETRLRRY KSRIKRRAAN GEGEGLAETV PLTVFSTPDH
     EDAELLEGWN PTVVCEATAN LPRLSVSDAV LELDFTGAAV LVFRHAGHGR INVVYRRGDG
     HVGWVDPPVS AVTEEVH
//

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