(data stored in ACNUC1104 zone)

SWISSPROT: D7A454_STAND

ID   D7A454_STAND            Unreviewed;       161 AA.
AC   D7A454;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   16-JAN-2019, entry version 33.
DE   SubName: Full=Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADH87874.1};
GN   OrderedLocusNames=Snov_0541 {ECO:0000313|EMBL:ADH87874.1};
OS   Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /
OS   NBRC 12443 / NCIB 9113).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Xanthobacteraceae; Starkeya.
OX   NCBI_TaxID=639283 {ECO:0000313|EMBL:ADH87874.1, ECO:0000313|Proteomes:UP000006633};
RN   [1] {ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Brettin T., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Beatson S., Kappler U.,
RA   Woyke T.;
RT   "Complete sequence of Starkeya novella DSM 506.";
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADH87874.1, ECO:0000313|Proteomes:UP000006633}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB
RC   9113 {ECO:0000313|Proteomes:UP000006633};
RX   PubMed=23450099; DOI=10.4056/sigs.3006378;
RA   Kappler U., Davenport K., Beatson S., Lucas S., Lapidus A.,
RA   Copeland A., Berry K.W., Glavina Del Rio T., Hammon N., Dalin E.,
RA   Tice H., Pitluck S., Richardson P., Bruce D., Goodwin L.A., Han C.,
RA   Tapia R., Detter J.C., Chang Y.J., Jeffries C.D., Land M., Hauser L.,
RA   Kyrpides N.C., Goker M., Ivanova N., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of the facultatively chemolithoautotrophic
RT   and methylotrophic alpha Proteobacterium Starkeya novella type strain
RT   (ATCC 8093(T)).";
RL   Stand. Genomic Sci. 7:44-58(2012).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002026; ADH87874.1; -; Genomic_DNA.
DR   RefSeq; WP_013165379.1; NC_014217.1.
DR   STRING; 639283.Snov_0541; -.
DR   EnsemblBacteria; ADH87874; ADH87874; Snov_0541.
DR   KEGG; sno:Snov_0541; -.
DR   eggNOG; ENOG41066CS; Bacteria.
DR   eggNOG; ENOG4111XEA; LUCA.
DR   OMA; PTIWAAE; -.
DR   OrthoDB; 2073326at2; -.
DR   BioCyc; SNOV639283:G1GLM-546-MONOMER; -.
DR   Proteomes; UP000006633; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR007387; TRAP_DctQ.
DR   PANTHER; PTHR35011; PTHR35011; 1.
DR   Pfam; PF04290; DctQ; 1.
PE   4: Predicted;
DR   PRODOM; D7A454.
DR   SWISS-2DPAGE; D7A454.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006633};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006633};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     30       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     42     64       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     90    109       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    129    147       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   161 AA;  17717 MW;  97AA5FB751A076DC CRC64;
     MISRFLDIAA RAFTAASATI VAILALPVAY DAISRSLRHP SIWVFDVSLY LMIAAAFLGN
     AYALRSGAHF RMMMAVDMAG PRVRHWADRL TFLVTFLFAV AMTWLSAGYV AENYQLGFTS
     GTLFDAPLWI PQLAMPLGGL SLAIEALRRL ILDDYPDVLE G
//

If you have problems or comments...

PBIL Back to PBIL home page