(data stored in ACNUC7421 zone)

SWISSPROT: A0A0F6BHS7_GEOS0

ID   A0A0F6BHS7_GEOS0        Unreviewed;       179 AA.
AC   A0A0F6BHS7;
DT   24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT   24-JUN-2015, sequence version 1.
DT   16-JAN-2019, entry version 18.
DE   RecName: Full=50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333};
GN   Name=rplE {ECO:0000256|HAMAP-Rule:MF_01333};
GN   OrderedLocusNames=GY4MC1_0122 {ECO:0000313|EMBL:ADP72978.1};
OS   Geobacillus sp. (strain Y4.1MC1).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.
OX   NCBI_TaxID=581103 {ECO:0000313|EMBL:ADP72978.1, ECO:0000313|Proteomes:UP000002034};
RN   [1] {ECO:0000313|EMBL:ADP72978.1, ECO:0000313|Proteomes:UP000002034}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Y4.1MC1 {ECO:0000313|EMBL:ADP72978.1,
RC   ECO:0000313|Proteomes:UP000002034};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N.,
RA   Ovchinnikova G., Brumm P., Mead D., Woyke T.;
RT   "Complete sequence of chromosome of Geobacillus sp. Y4.1MC1.";
RL   Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: This is 1 of the proteins that binds and probably
CC       mediates the attachment of the 5S RNA into the large ribosomal
CC       subunit, where it forms part of the central protuberance. In the
CC       70S ribosome it contacts protein S13 of the 30S subunit (bridge
CC       B1b), connecting the 2 subunits; this bridge is implicated in
CC       subunit movement. Contacts the P site tRNA; the 5S rRNA and some
CC       of its associated proteins might help stabilize positioning of
CC       ribosome-bound tRNAs. {ECO:0000256|HAMAP-Rule:MF_01333}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site
CC       tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
CC       {ECO:0000256|HAMAP-Rule:MF_01333}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003930}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002293; ADP72978.1; -; Genomic_DNA.
DR   RefSeq; WP_003247587.1; NC_014650.1.
DR   EnsemblBacteria; ADP72978; ADP72978; GY4MC1_0122.
DR   GeneID; 29237242; -.
DR   KEGG; gmc:GY4MC1_0122; -.
DR   KO; K02931; -.
DR   OMA; EQVMFHE; -.
DR   OrthoDB; 1456375at2; -.
DR   BioCyc; GSP581103:G1GOQ-149-MONOMER; -.
DR   Proteomes; UP000002034; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1440.10; -; 1.
DR   HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR   InterPro; IPR002132; Ribosomal_L5.
DR   InterPro; IPR020930; Ribosomal_L5_bac-type.
DR   InterPro; IPR031309; Ribosomal_L5_C.
DR   InterPro; IPR020929; Ribosomal_L5_CS.
DR   InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR   InterPro; IPR031310; Ribosomal_L5_N.
DR   PANTHER; PTHR11994; PTHR11994; 1.
DR   Pfam; PF00281; Ribosomal_L5; 1.
DR   Pfam; PF00673; Ribosomal_L5_C; 1.
DR   PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR   SUPFAM; SSF55282; SSF55282; 1.
DR   PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE   3: Inferred from homology;
DR   PRODOM; A0A0F6BHS7.
DR   SWISS-2DPAGE; A0A0F6BHS7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002034};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01333,
KW   ECO:0000256|RuleBase:RU003930};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01333,
KW   ECO:0000256|RuleBase:RU003930, ECO:0000313|EMBL:ADP72978.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01333};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01333};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01333}.
FT   DOMAIN       24     80       Ribosomal_L5. {ECO:0000259|Pfam:PF00281}.
FT   DOMAIN       84    177       Ribosomal_L5_C. {ECO:0000259|Pfam:
FT                                PF00673}.
SQ   SEQUENCE   179 AA;  20107 MW;  399658DA88116D2A CRC64;
     MNRLKEKYLK EVTPALMSKF NYKSVMQVPK IEKIVINMGV GDAVQNPKAL DSAVEELTLI
     AGQKPVVTRA KKSIAGFRLR AGMPIGAKVT LRGERMYEFL DKLISVSLPR VRDFRGVSKK
     SFDGRGNYTL GIKEQLIFPE IDYDKVNKVR GMDIVIVTTA ETDEEARELL ALLGMPFQK
//

If you have problems or comments...

PBIL Back to PBIL home page