(data stored in ACNUC1104 zone)

SWISSPROT: E6UYX8_VARPE

ID   E6UYX8_VARPE            Unreviewed;       461 AA.
AC   E6UYX8;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADU34307.1};
GN   OrderedLocusNames=Varpa_0084 {ECO:0000313|EMBL:ADU34307.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34307.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34307.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34307.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34307.1; -; Genomic_DNA.
DR   STRING; 595537.Varpa_0084; -.
DR   EnsemblBacteria; ADU34307; ADU34307; Varpa_0084.
DR   KEGG; vpe:Varpa_0084; -.
DR   eggNOG; ENOG4105C1I; Bacteria.
DR   eggNOG; COG1167; LUCA.
DR   HOGENOM; HOG000133005; -.
DR   OMA; PGYYPLF; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR   GO; GO:0008483; F:transaminase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009058; P:biosynthetic process; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.40.640.10; -; 1.
DR   Gene3D; 3.90.1150.10; -; 1.
DR   InterPro; IPR004839; Aminotransferase_I/II.
DR   InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR   InterPro; IPR015422; PyrdxlP-dep_Trfase_dom1.
DR   InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00155; Aminotran_1_2; 1.
DR   Pfam; PF00392; GntR; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF53383; SSF53383; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; E6UYX8.
DR   SWISS-2DPAGE; E6UYX8.
KW   Aminotransferase {ECO:0000313|EMBL:ADU34307.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01113652};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01113624};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01113681};
KW   Transferase {ECO:0000313|EMBL:ADU34307.1}.
FT   DOMAIN        2     70       HTH gntR-type. {ECO:0000259|PROSITE:
FT                                PS50949}.
SQ   SEQUENCE   461 AA;  50653 MW;  137258D483337C49 CRC64;
     MTTIADSLAD TLARQIASGA YKAGDKLPSL RELAQLHGYA KNTVVAAFEL LVSRGLVEPR
     RGSGYFVLAQ STTPKPPEED AGSLGRAMDI VWLMREQLKT QPDAVAVGDG FPPVEWLADV
     RLDKYHPKVV RTGLGALFRY GSRFGYAPLR DHLVRKLADF GIGAEPRQIV LTHGANEAMD
     IVIRYFVPPG GKVLVDDPGY YPLFGKLKLA GAQMLAVPRL ADGPDLDVLE QLLIAERPRL
     FFTQSLAHNP TGSDISPAKA FRVLQLAQKY DLLIVENDPL ADFKPTALPR LSALDQLERT
     IYIGSFSKSF SAALRVGFIA CGADLASDLA DLKALIHVSS SEYSERTVDV ILSEGHYQRH
     LNRLQNRLGE ATRSALQLFD SVDTEVFART PQSLYIWAAL PGVADSLAFA KELLPRKIVM
     APGRIFSVDS TQVSRWSRFN VGAMADPRFA KALRTALRRR V
//

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