(data stored in ACNUC1104 zone)

SWISSPROT: E6UYY2_VARPE

ID   E6UYY2_VARPE            Unreviewed;       328 AA.
AC   E6UYY2;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 39.
DE   SubName: Full=3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADU34311.1};
GN   OrderedLocusNames=Varpa_0089 {ECO:0000313|EMBL:ADU34311.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34311.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34311.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34311.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34311.1; -; Genomic_DNA.
DR   RefSeq; WP_013538558.1; NC_014931.1.
DR   STRING; 595537.Varpa_0089; -.
DR   EnsemblBacteria; ADU34311; ADU34311; Varpa_0089.
DR   GeneID; 29720138; -.
DR   KEGG; vpe:Varpa_0089; -.
DR   eggNOG; ENOG4105F35; Bacteria.
DR   eggNOG; COG1250; LUCA.
DR   HOGENOM; HOG000141499; -.
DR   OMA; NELNEMC; -.
DR   OrthoDB; 862072at2; -.
DR   BioCyc; VPAR595537:G1GQO-86-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003857; F:3-hydroxyacyl-CoA dehydrogenase activity; IEA:InterPro.
DR   GO; GO:0070403; F:NAD+ binding; IEA:InterPro.
DR   GO; GO:0006631; P:fatty acid metabolic process; IEA:InterPro.
DR   Gene3D; 1.10.1040.10; -; 1.
DR   InterPro; IPR022694; 3-OHacyl-CoA_DH.
DR   InterPro; IPR006176; 3-OHacyl-CoA_DH_NAD-bd.
DR   InterPro; IPR006108; 3HC_DH_C.
DR   InterPro; IPR008927; 6-PGluconate_DH-like_C_sf.
DR   InterPro; IPR013328; 6PGD_dom2.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   Pfam; PF00725; 3HCDH; 1.
DR   Pfam; PF02737; 3HCDH_N; 1.
DR   PIRSF; PIRSF000105; HCDH; 1.
DR   SUPFAM; SSF48179; SSF48179; 1.
DR   SUPFAM; SSF51735; SSF51735; 1.
PE   4: Predicted;
DR   PRODOM; E6UYY2.
DR   SWISS-2DPAGE; E6UYY2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT   DOMAIN       23    196       3HCDH_N. {ECO:0000259|Pfam:PF02737}.
FT   DOMAIN      201    269       3HCDH. {ECO:0000259|Pfam:PF00725}.
FT   SITE        154    154       Important for catalytic activity.
FT                                {ECO:0000256|PIRSR:PIRSR000105-1}.
SQ   SEQUENCE   328 AA;  35218 MW;  FAB3E3364C6625CB CRC64;
     MDDEGREPLR AVEIMTHLNV QRVAVVGTGV IGASWTAYFL AQGLDVNATD PSPGAEDRLR
     AAVAQHWPTL ERFGLAEGAS VDRLRFHDSL EDAVSVADFV QENGPERMDF KIDLFRRMDA
     AAPPETILAS SSSGLAISGV QSGCAHPQRV VLGHPFNPPH LIPLVEVIGG EKTSADTIER
     TMAFYAAIGK RPIHVKREVK GHIANRLQAA LWREAFHLVN EGVASVADID TAIAHGPGLR
     WAVMGPFMNL HLSGGAGGIE HVLAHLGGPI EDWWKDLGAP SMTAELKQKV AAGVAEELGA
     RRTSDLEAAR DTLLLNLIRA KADTGKLD
//

If you have problems or comments...

PBIL Back to PBIL home page