(data stored in ACNUC1104 zone)

SWISSPROT: E6UZ21_VARPE

ID   E6UZ21_VARPE            Unreviewed;       313 AA.
AC   E6UZ21;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 52.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU34350.1};
GN   OrderedLocusNames=Varpa_0128 {ECO:0000313|EMBL:ADU34350.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34350.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34350.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34350.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34350.1; -; Genomic_DNA.
DR   STRING; 595537.Varpa_0128; -.
DR   EnsemblBacteria; ADU34350; ADU34350; Varpa_0128.
DR   KEGG; vpe:Varpa_0128; -.
DR   eggNOG; ENOG4108ENA; Bacteria.
DR   eggNOG; COG3449; LUCA.
DR   HOGENOM; HOG000253957; -.
DR   KO; K13652; -.
DR   OMA; QRFIAWR; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 3.20.80.10; -; 1.
DR   InterPro; IPR010499; AraC_E-bd.
DR   InterPro; IPR029442; GyrI-like.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR011256; Reg_factor_effector_dom_sf.
DR   Pfam; PF06445; GyrI-like; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00871; AraC_E_bind; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF55136; SSF55136; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; E6UZ21.
DR   SWISS-2DPAGE; E6UZ21.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT   DOMAIN       18    117       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   313 AA;  34778 MW;  FE516C3AE0CABC7C CRC64;
     MRAMTTRDSR SEYEWRMHKV LTHIDDHLDE PLELAALADV AHFSASHFHR LFAAWAGETL
     GDYIRRRRVE VAALRLATQP HLSVLEAAVS VGFGSGEAFT RAFRAHFGSA PSAWRAAHDG
     SPPCDDPSRD SNPDQIALHG FTKNGSPLRN PAHEEPPVNV QLITRPPVTI AYLRYTGPFG
     APVGAFWATK VAPWICAHDL WSHARYGISH DDPSITAPEH SRYDACVEVP DNFVTDGGFH
     KTVLPGGRYV SLRFQGLPAE INDAWMRLMR DWLPASGFQF DSRPAFEYYG PGMAFDEKTG
     AFECDICIPI APL
//

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