(data stored in ACNUC1104 zone)

SWISSPROT: E6V078_VARPE

ID   E6V078_VARPE            Unreviewed;       326 AA.
AC   E6V078;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34392.1};
GN   OrderedLocusNames=Varpa_0170 {ECO:0000313|EMBL:ADU34392.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34392.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34392.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34392.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34392.1; -; Genomic_DNA.
DR   RefSeq; WP_013538639.1; NC_014931.1.
DR   STRING; 595537.Varpa_0170; -.
DR   EnsemblBacteria; ADU34392; ADU34392; Varpa_0170.
DR   GeneID; 29717799; -.
DR   KEGG; vpe:Varpa_0170; -.
DR   eggNOG; ENOG4106Y12; Bacteria.
DR   eggNOG; ENOG410XRX7; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; RQLCRLH; -.
DR   OrthoDB; 1591366at2; -.
DR   BioCyc; VPAR595537:G1GQO-167-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   InterPro; IPR037402; YidZ_PBP2.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V078.
DR   SWISS-2DPAGE; E6V078.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        8     65       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   326 AA;  35915 MW;  002863E1EB6162EB CRC64;
     MDVNFRTLDL NLLRVFDEVM AERNLTRAAR NLSITQPAVS NALRRLREVI GDELVRRAGA
     GVEPTPRALA LWPTVRDALR QLQHTLAPGE FDAATADTTF LLAMADATAA ELIPGLVQIA
     EKEAPAISLR VLPLTTRDPR RMLENEEVDM AIGYFPAVIA SLAARGQSGV GVPFETQRLY
     LGQYVCVMRR GHPLANAPLT LDDYCAARHL LVSFSGRPYG FIDQTLGAMG RERRIVVTVN
     QFFTAGRVVA NSDLLTVLPR HFVTVTGIDD QLVLRDLPFD QPPVHVDAIW HRRAQHGHAH
     EWLRTALLRS AAAAFAGSIL GQKVPD
//

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