(data stored in ACNUC1104 zone)

SWISSPROT: E6V088_VARPE

ID   E6V088_VARPE            Unreviewed;       293 AA.
AC   E6V088;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 46.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU34402.1};
GN   OrderedLocusNames=Varpa_0180 {ECO:0000313|EMBL:ADU34402.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34402.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34402.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34402.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
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DR   EMBL; CP002417; ADU34402.1; -; Genomic_DNA.
DR   RefSeq; WP_013538649.1; NC_014931.1.
DR   STRING; 595537.Varpa_0180; -.
DR   EnsemblBacteria; ADU34402; ADU34402; Varpa_0180.
DR   GeneID; 29717993; -.
DR   KEGG; vpe:Varpa_0180; -.
DR   eggNOG; ENOG4105EUS; Bacteria.
DR   eggNOG; COG0600; LUCA.
DR   HOGENOM; HOG000134230; -.
DR   KO; K02050; -.
DR   OMA; GIGHMIV; -.
DR   OrthoDB; 1531811at2; -.
DR   BioCyc; VPAR595537:G1GQO-181-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V088.
DR   SWISS-2DPAGE; E6V088.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     49     72       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    104    126       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    138    160       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    166    188       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    230    250       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    262    280       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      100    280       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   293 AA;  31231 MW;  71C0FC255CBF20B1 CRC64;
     MQATSSKALP QQVPPRAASA GAASSQPVVP PVRRRAFAPL EPIGARARVL LGLGFFVVFV
     LVWSLATLGG FVSPTFLASP PTMVKEGWLL FTEYGFIGDI GMTVWRVFGG FLLAAVFAVP
     LGIAMGTWKT VEAFFEPFVS FCRYLPASAF IPLLILWAGL GEMQKLLVIF IGSFFQIVLM
     VAVTVGGARR DLVEAAYTLG ANSRGIVARV LIPGAAPGIA ETLRLVLGWA WTYVIVAELI
     GSSSGIGHMI TDSQALLNTG QIIFGIIVIG VIGLLSDFAF KALNRRLFAW AAL
//

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