(data stored in ACNUC1104 zone)

SWISSPROT: E6V193_VARPE

ID   E6V193_VARPE            Unreviewed;       324 AA.
AC   E6V193;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34457.1};
GN   OrderedLocusNames=Varpa_0235 {ECO:0000313|EMBL:ADU34457.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34457.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34457.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34457.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34457.1; -; Genomic_DNA.
DR   RefSeq; WP_013538703.1; NC_014931.1.
DR   STRING; 595537.Varpa_0235; -.
DR   EnsemblBacteria; ADU34457; ADU34457; Varpa_0235.
DR   GeneID; 29717655; -.
DR   KEGG; vpe:Varpa_0235; -.
DR   eggNOG; ENOG4105EXG; Bacteria.
DR   eggNOG; ENOG410XNZJ; LUCA.
DR   HOGENOM; HOG000233519; -.
DR   OMA; IVTPIFP; -.
DR   OrthoDB; 1661500at2; -.
DR   BioCyc; VPAR595537:G1GQO-237-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V193.
DR   SWISS-2DPAGE; E6V193.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN       10     65       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   324 AA;  35947 MW;  BD4DC1C3FF8E6725 CRC64;
     MGTNSFLKVL PEMVTFLRVA ELGSFSAAAD LLGMTPSAAS RQVKRLEKEI GVQLLQRTTR
     QLRLTEPGAE AFARCRELVA VAQGAMDIAQ RFSKKPSGLV RISAPKAFAR RVLHPHILDF
     LRRYPEVDVQ LIVQDRNIDP IREGVDLVVR LTTEPPEGLV ARQLMPVAHI LCASPRYLEQ
     HEAIAHPRGL VAHSCLSLGE HERDNHWRFR QGDAEEAEVV VRGRYVSNHS EVRLEAALAD
     LGVACVPAFM TQEALESGRV VQVLAGWEFQ GNYRGHAWIL YPPSRFTVPK CRVLIDHLLD
     ALATGPEKKL SSSSARRGPP RAAS
//

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