(data stored in ACNUC1104 zone)

SWISSPROT: E6V2A2_VARPE

ID   E6V2A2_VARPE            Unreviewed;       304 AA.
AC   E6V2A2;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 44.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34533.1};
GN   OrderedLocusNames=Varpa_0311 {ECO:0000313|EMBL:ADU34533.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34533.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34533.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34533.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP002417; ADU34533.1; -; Genomic_DNA.
DR   RefSeq; WP_013538779.1; NC_014931.1.
DR   STRING; 595537.Varpa_0311; -.
DR   EnsemblBacteria; ADU34533; ADU34533; Varpa_0311.
DR   GeneID; 29719122; -.
DR   KEGG; vpe:Varpa_0311; -.
DR   eggNOG; ENOG4107WS5; Bacteria.
DR   eggNOG; ENOG410Y277; LUCA.
DR   HOGENOM; HOG000233514; -.
DR   OMA; DQEPSML; -.
DR   OrthoDB; 990666at2; -.
DR   BioCyc; VPAR595537:G1GQO-313-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V2A2.
DR   SWISS-2DPAGE; E6V2A2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        6     63       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   304 AA;  32857 MW;  115079EC4CC88E19 CRC64;
     MTTAAMDLQI LRAFVLAAKE GNVSRAAERL HLTQPAVSLQ LKRFAEETGL VLFTRTPHGL
     ALTADGAAML PQAERVLAAV GDLQQAARKL QGTVRGALRI GTILDPEFTR LGVFLRELVE
     AAPQIETELR HGMSGSVLAQ VLRGDLDVGF HLDPGDDDQA ATTPAPALSV RPLTRFTYRV
     VAPAGWGPQV QGRDWKALAA LPWLATPPES AHHRLLERVF APLGLSPRRV AMVDQEASML
     DLLKSGIGLS LVRDSIAIRE CQAHGLAMAD RVQLDCALRF VSLASRRDEP VIASAWDALA
     KAWN
//

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