(data stored in ACNUC1104 zone)

SWISSPROT: E6V2D7_VARPE

ID   E6V2D7_VARPE            Unreviewed;       503 AA.
AC   E6V2D7;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 37.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADU34568.1};
GN   OrderedLocusNames=Varpa_0346 {ECO:0000313|EMBL:ADU34568.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34568.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34568.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34568.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34568.1; -; Genomic_DNA.
DR   RefSeq; WP_013538814.1; NC_014931.1.
DR   STRING; 595537.Varpa_0346; -.
DR   EnsemblBacteria; ADU34568; ADU34568; Varpa_0346.
DR   GeneID; 29720141; -.
DR   KEGG; vpe:Varpa_0346; -.
DR   eggNOG; ENOG4105C1D; Bacteria.
DR   eggNOG; COG3333; LUCA.
DR   HOGENOM; HOG000106370; -.
DR   OMA; ILMFCSI; -.
DR   OrthoDB; 735109at2; -.
DR   BioCyc; VPAR595537:G1GQO-348-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR002823; DUF112_TM.
DR   Pfam; PF01970; TctA; 1.
PE   4: Predicted;
DR   PRODOM; E6V2D7.
DR   SWISS-2DPAGE; E6V2D7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      7     33       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     53     71       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    109    132       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    152    182       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    203    223       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    259    282       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    318    337       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    357    377       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    389    408       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    473    492       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   503 AA;  52891 MW;  016FD02E9B21B70A CRC64;
     MDLIHNLSIG FGVAFTFTNL LYCLLGCILG TLIGVLPGIG PVATIAMLLP ATYALPPVSA
     LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTCIDGYQM ARQGRAGPAL AAAGLGSFFA
     GCVGTLILAA FAPPLTELAF KFGPAEYFSL MTLGLIGAVV LASGSLLKAV AMIVLGLLLG
     IVGTDVNSGV ARFSFDIPEL TDGIGFVVIA MGVFGYGEII GNLSQPDDER EVFTHKVKGL
     WPTKDDFKRM TPAVLRGTAL GSALGILPGG GALLAAFAAY ALEKKIKMRP GEVPFGKGNI
     RGVASPESAN NAGAQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG
     LIASMWIGNA MLIILNLPLI GMWIKLLTVP YKFLFPAIVL FCAIGVYSTN NNTFDVWMVA
     IFGFIGYLFL KLKTEPAPLL LGFILGPMME ENLRRALLLS RGAWSVFVTR PLSAGLLVAA
     AALLCIVLLP SIKAKREEAF VEE
//

If you have problems or comments...

PBIL Back to PBIL home page