(data stored in ACNUC1104 zone)

SWISSPROT: E6V2F0_VARPE

ID   E6V2F0_VARPE            Unreviewed;       296 AA.
AC   E6V2F0;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU34581.1};
GN   OrderedLocusNames=Varpa_0359 {ECO:0000313|EMBL:ADU34581.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34581.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34581.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34581.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34581.1; -; Genomic_DNA.
DR   RefSeq; WP_013538827.1; NC_014931.1.
DR   STRING; 595537.Varpa_0359; -.
DR   EnsemblBacteria; ADU34581; ADU34581; Varpa_0359.
DR   GeneID; 29719569; -.
DR   KEGG; vpe:Varpa_0359; -.
DR   eggNOG; ENOG4105E8B; Bacteria.
DR   eggNOG; ENOG410XQTE; LUCA.
DR   HOGENOM; HOG000160813; -.
DR   OMA; IHEITIQ; -.
DR   OrthoDB; 1268974at2; -.
DR   BioCyc; VPAR595537:G1GQO-361-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR003313; AraC-bd.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR037923; HTH-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   Pfam; PF02311; AraC_binding; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF51215; SSF51215; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; E6V2F0.
DR   SWISS-2DPAGE; E6V2F0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      184    282       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   296 AA;  33337 MW;  A121620283BE45AE CRC64;
     MQPDLEIVEV RGDESFTAWA HGYPYRTVRW HFHPEYEIQL IVETKGVYFV GDHVGHFEPG
     NLVLMGPDLP HNWISDVPAG QSVERRGIVI QFPAELMKNM SAAFPEFQRI APLLAESGSG
     LLFSAETALA AKPVMESLLE ARGLRRVILL LSLLELLVDS HDRQRLASPA FKPDPKAFMS
     HAINNVLAHI SANLGDELRE PMLAELVGQS PSAFSRSFRK HTGQSFVRYV NRLRISRACE
     LLTNSEKPVL DVCMDVGFNN VSNFNRQFLL HKRMPPTKFR NFHRMQAAAS RATNAP
//

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