(data stored in SCRATCH zone)

SWISSPROT: E6V3A9_VARPE

ID   E6V3A9_VARPE            Unreviewed;       358 AA.
AC   E6V3A9;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   11-DEC-2019, entry version 45.
DE   SubName: Full=Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ADU34599.1};
GN   OrderedLocusNames=Varpa_0377 {ECO:0000313|EMBL:ADU34599.1}, Varpa_5459
GN   {ECO:0000313|EMBL:ADU39614.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34599.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34599.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34599.1};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:ADU34599.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34599.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT   paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34599.1; -; Genomic_DNA.
DR   EMBL; CP002417; ADU39614.1; -; Genomic_DNA.
DR   RefSeq; WP_013538845.1; NC_014931.1.
DR   STRING; 595537.Varpa_5459; -.
DR   EnsemblBacteria; ADU34599; ADU34599; Varpa_0377.
DR   EnsemblBacteria; ADU39614; ADU39614; Varpa_5459.
DR   GeneID; 29719366; -.
DR   KEGG; vpe:Varpa_0377; -.
DR   KEGG; vpe:Varpa_5459; -.
DR   eggNOG; ENOG4105EQR; Bacteria.
DR   eggNOG; COG3547; LUCA.
DR   HOGENOM; HOG000255700; -.
DR   OMA; PWCAQLP; -.
DR   OrthoDB; 655500at2; -.
DR   BioCyc; VPAR595537:G1GQO-379-MONOMER; -.
DR   BioCyc; VPAR595537:G1GQO-5493-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR   GO; GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
DR   InterPro; IPR003346; Transposase_20.
DR   InterPro; IPR002525; Transposase_N.
DR   Pfam; PF01548; DEDD_Tnp_IS110; 1.
DR   Pfam; PF02371; Transposase_20; 1.
PE   4: Predicted;
FT   DOMAIN          7..150
FT                   /note="DEDD_Tnp_IS110"
FT                   /evidence="ECO:0000259|Pfam:PF01548"
DR   PRODOM; E6V3A9.
DR   SWISS-2DPAGE; E6V3A9.
SQ   SEQUENCE   358 AA;  38930 MW;  30FC993B453C9C7F CRC64;
     MNEITRVGVD LAKRVIQVFA VNAAGLRVTG RALARDKFLA WCAQLPAGCL VAMEASSSAH
     YWARKLLALG LDARIIAAPH VVPYRLQGKS GKNDANDAAA ICEAASRPHM HFVPIKSVEQ
     QSMLCIHRLR EGVKADRTAC INRIRGLLAE FGLVFAQSPE ALRQVLPDAM EDASNELGAL
     ARLTLQRAYA QWQELDAHLR WCDERIAAHG KASDQVRQAE QLLGVGPVTA SAVVATVGDF
     KQFKNGAQFG AWLGLTPRQN SSGGKNNLGR ITKRGDAYLR TLLIQGAKSI VLTAHRRDDP
     ISRWVQALRE RSGWQKAVVA LANKNARILW AVFARGRAFD AHHVSTKPPG AIAAVIAV
//

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