(data stored in ACNUC1104 zone)

SWISSPROT: E6V3D3_VARPE

ID   E6V3D3_VARPE            Unreviewed;       237 AA.
AC   E6V3D3;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 44.
DE   RecName: Full=Probable transcriptional regulatory protein Varpa_0401 {ECO:0000256|HAMAP-Rule:MF_00693};
GN   OrderedLocusNames=Varpa_0401 {ECO:0000313|EMBL:ADU34623.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34623.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34623.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34623.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC   -!- SIMILARITY: Belongs to the TACO1 family. {ECO:0000256|HAMAP-
CC       Rule:MF_00693}.
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DR   EMBL; CP002417; ADU34623.1; -; Genomic_DNA.
DR   RefSeq; WP_013538869.1; NC_014931.1.
DR   STRING; 595537.Varpa_0401; -.
DR   EnsemblBacteria; ADU34623; ADU34623; Varpa_0401.
DR   GeneID; 29717231; -.
DR   KEGG; vpe:Varpa_0401; -.
DR   eggNOG; ENOG4105CDY; Bacteria.
DR   eggNOG; COG0217; LUCA.
DR   HOGENOM; HOG000228370; -.
DR   OMA; CAKNGGF; -.
DR   OrthoDB; 1304328at2; -.
DR   BioCyc; VPAR595537:G1GQO-403-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.200; -; 1.
DR   Gene3D; 3.30.70.980; -; 2.
DR   HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR   InterPro; IPR017856; Integrase-like_N.
DR   InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR   InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR   InterPro; IPR029072; YebC-like.
DR   PANTHER; PTHR12532; PTHR12532; 1.
DR   Pfam; PF01709; Transcrip_reg; 1.
DR   SUPFAM; SSF75625; SSF75625; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V3D3.
DR   SWISS-2DPAGE; E6V3D3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00693};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00693};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00693}.
SQ   SEQUENCE   237 AA;  25271 MW;  C09E8158A269C642 CRC64;
     MGAQWKAKHK DLAANAKGRL FGKLAKEIMM AARNGADPAS NSRLRLVVEQ ARKVSMPKDT
     LDRAIKKGAG LTGEAVHFEH VIYEGFAPHR VPVMVECLTD NVNRTAPEMR VLFRKGQLGT
     SGSVSWDFDH VGMIEAEPAN ATADAEVAAI EAGAQDFEPA GESNATVFLT DPTDLDLVSR
     ALPAQGFTVL SAKLGYKPKN PVDPASLSAA DLEEVEVFLA AIDANDDVQN VYVGLAG
//

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