(data stored in ACNUC1104 zone)

SWISSPROT: E6V3F3_VARPE

ID   E6V3F3_VARPE            Unreviewed;       334 AA.
AC   E6V3F3;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 48.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU34643.1};
GN   OrderedLocusNames=Varpa_0421 {ECO:0000313|EMBL:ADU34643.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34643.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34643.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34643.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
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DR   EMBL; CP002417; ADU34643.1; -; Genomic_DNA.
DR   RefSeq; WP_013538889.1; NC_014931.1.
DR   STRING; 595537.Varpa_0421; -.
DR   EnsemblBacteria; ADU34643; ADU34643; Varpa_0421.
DR   GeneID; 29716131; -.
DR   KEGG; vpe:Varpa_0421; -.
DR   eggNOG; ENOG4105CJM; Bacteria.
DR   eggNOG; COG0601; LUCA.
DR   HOGENOM; HOG000170242; -.
DR   KO; K12369; -.
DR   OMA; PENRVIY; -.
DR   OrthoDB; 1479518at2; -.
DR   BioCyc; VPAR595537:G1GQO-423-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V3F3.
DR   SWISS-2DPAGE; E6V3F3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     12     30       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     94    123       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    144    162       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    194    217       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    256    277       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    307    328       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       96    321       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   334 AA;  36598 MW;  EEA3BBF261958486 CRC64;
     MFKFICVRLS LLVPTFIGMT LLAFFLIRLV PGDPIETMAG ERGIDPARHA ELRTAYGFDK
     PILVQYGIYI GRVLHGDLGK SIITQDKVMS EFLALFPATV ELGVCAILFA LLLGLPAGIL
     AAVRRNSIFD HGVMATSLTG YSMPIFWWGL LLILFFSVQL GWTPVSGRIA VQYFIEPETG
     FLLIDSLRAG DTDAFWSALH HLILPAIVLG TVPLAVIARM TRSAMLEVLG EDYIRTARAK
     GLSRFRVVGL HALRNALIPV VTVIGLQVGV LFTGAILTET IFSWPGVGKW LIEAIGRRDY
     PVLQGGMLLL GGIVMLVNLL VDVAYGVINP RIRR
//

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