(data stored in ACNUC1104 zone)

SWISSPROT: E6V3F4_VARPE

ID   E6V3F4_VARPE            Unreviewed;       304 AA.
AC   E6V3F4;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 53.
DE   SubName: Full=Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU34644.1};
GN   OrderedLocusNames=Varpa_0422 {ECO:0000313|EMBL:ADU34644.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34644.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34644.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34644.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032,
CC       ECO:0000256|SAAS:SAAS00723689}.
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DR   EMBL; CP002417; ADU34644.1; -; Genomic_DNA.
DR   STRING; 595537.Varpa_0422; -.
DR   EnsemblBacteria; ADU34644; ADU34644; Varpa_0422.
DR   KEGG; vpe:Varpa_0422; -.
DR   eggNOG; ENOG4105C2T; Bacteria.
DR   eggNOG; COG1173; LUCA.
DR   HOGENOM; HOG000171368; -.
DR   KO; K12370; -.
DR   OMA; IERAWWV; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   InterPro; IPR025966; OppC_N.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   Pfam; PF12911; OppC_N; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; E6V3F4.
DR   SWISS-2DPAGE; E6V3F4.
KW   Cell membrane {ECO:0000256|SAAS:SAAS00723714};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00723738}.
FT   TRANSMEM     36     57       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    104    130       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    150    177       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    268    291       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      102    291       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   304 AA;  31989 MW;  2E41966868AAB399 CRC64;
     MMNTTSTPTI PTTGASTAPP GPWREFWTAF SANRGAVIGL VTIVVLLLVA LFAPWIAPHA
     PNETNSAVFL QPPAWQQGGT WSYLLGTDAI GRDILSRLMY GARLSLSIGV AVVALSVVAG
     VVLGLIAGFF RGVLEIAIMR LMDIVLTLPS LLLAIVIVAI LGPGLVNAML AVAIVVLPHY
     VRITRAAVIA EVSRDYVTAA RVSGAGTLRL MFREVLPNCA APLIVQASLG ISTAILDAAA
     LGFLGLGAQP PSPEWGTMLA DAREFVLRAW WVVTFPGLAI LAAVLAFNLL GDGLRDALDP
     KLKR
//

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