(data stored in ACNUC1104 zone)

SWISSPROT: E6V4D1_VARPE

ID   E6V4D1_VARPE            Unreviewed;       434 AA.
AC   E6V4D1;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 38.
DE   SubName: Full=PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ADU34677.1};
GN   OrderedLocusNames=Varpa_0455 {ECO:0000313|EMBL:ADU34677.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34677.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34677.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34677.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34677.1; -; Genomic_DNA.
DR   RefSeq; WP_013538923.1; NC_014931.1.
DR   STRING; 595537.Varpa_0455; -.
DR   EnsemblBacteria; ADU34677; ADU34677; Varpa_0455.
DR   GeneID; 29720165; -.
DR   KEGG; vpe:Varpa_0455; -.
DR   eggNOG; ENOG4105NH0; Bacteria.
DR   eggNOG; COG3182; LUCA.
DR   HOGENOM; HOG000254654; -.
DR   OMA; FDLHRSG; -.
DR   OrthoDB; 1656356at2; -.
DR   BioCyc; VPAR595537:G1GQO-456-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR005625; PepSY-ass_TM.
DR   PANTHER; PTHR34219; PTHR34219; 1.
DR   Pfam; PF03929; PepSY_TM; 1.
PE   4: Predicted;
DR   PRODOM; E6V4D1.
DR   SWISS-2DPAGE; E6V4D1.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     32       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    155    177       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    226    245       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    378    399       Helical. {ECO:0000256|SAM:Phobius}.
FT   COILED      399    419       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   434 AA;  48583 MW;  913E0EA91AA783DD CRC64;
     MRAFATGIHR WAGLAVALFL VVSGLTGAVI SWDHEIDGWL NRKLYDTQSR GPFKDPFELA
     AAVEAHDPRA RVAYMPLGFE EGHAAGYFVQ PRVDPATGKP FRLGYNQVFV DPVTAEVRGR
     RDSTAISLKP ETLMPFLRKL HYMLHVPAMW GTDRIGWWIM GTVALVWLLD SFVALYLTMP
     RRLRKAVHPT HRPAAAWWQR WKPSWTVRWA AGGYKLNFDL HRAGGLWIWG LIIVVAFTSF
     SLNLYKEVFH PMLSLVSKTT PGPSALVPLA PLGTRIEPTI GFREIVAQAE AEARRRGWTT
     PLGGAFYNAR GGFYNISFFD HATHDDSDGM GLSNLYLDGR DGHVISSNRP WHGTAADVFA
     QLQLPLHGGR ILGMPGRIMM SALGLVVAML SITGIVIWAR KLRSRRLQAR REREQARTAA
     PGFRQDAGFS PARR
//

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