(data stored in ACNUC1104 zone)

SWISSPROT: E6V4H0_VARPE

ID   E6V4H0_VARPE            Unreviewed;       312 AA.
AC   E6V4H0;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 50.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU34716.1};
GN   OrderedLocusNames=Varpa_0494 {ECO:0000313|EMBL:ADU34716.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34716.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34716.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34716.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34716.1; -; Genomic_DNA.
DR   RefSeq; WP_013538962.1; NC_014931.1.
DR   STRING; 595537.Varpa_0494; -.
DR   EnsemblBacteria; ADU34716; ADU34716; Varpa_0494.
DR   GeneID; 29720197; -.
DR   KEGG; vpe:Varpa_0494; -.
DR   eggNOG; ENOG4105E8B; Bacteria.
DR   eggNOG; ENOG410XQTE; LUCA.
DR   HOGENOM; HOG000160813; -.
DR   OMA; GDYIGEF; -.
DR   OrthoDB; 1268974at2; -.
DR   BioCyc; VPAR595537:G1GQO-495-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR037923; HTH-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF51215; SSF51215; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; E6V4H0.
DR   SWISS-2DPAGE; E6V4H0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      201    299       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   312 AA;  35277 MW;  20B5B7487B805111 CRC64;
     MTSSSQRSPR QLLPEVEVER SRSTELGYEP STEVGLVRCL EHGFPTPLAR WHCHEEYELH
     LIVATSGQAF VGDWIGAFEP GHLVLCGPKL PHNWISLDMP AEGVPQRDLV IQFLHDPIFE
     AAQRIPELQE AVRMLERARY GIEFFGMSAS AEAHWHRVKD ARGLKRFSLF CDFLADMAMC
     TDYRLLSGMQ TDGDHGIEAI NDVVTRITNE PAKDISAADI AAELGMNPGR FGRLFRRATG
     HSFLGYVNEV RINKACLLLM QSDRYVTSIC YEVGFNNVSN FNRRFLEIKG VTPTEFRRQS
     QLRFEGAGSL EN
//

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