(data stored in ACNUC1104 zone)

SWISSPROT: E6V5G0_VARPE

ID   E6V5G0_VARPE            Unreviewed;       328 AA.
AC   E6V5G0;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 55.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU34766.1};
GN   OrderedLocusNames=Varpa_0545 {ECO:0000313|EMBL:ADU34766.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34766.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34766.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34766.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
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DR   EMBL; CP002417; ADU34766.1; -; Genomic_DNA.
DR   RefSeq; WP_013539012.1; NC_014931.1.
DR   STRING; 595537.Varpa_0545; -.
DR   EnsemblBacteria; ADU34766; ADU34766; Varpa_0545.
DR   GeneID; 29718087; -.
DR   KEGG; vpe:Varpa_0545; -.
DR   eggNOG; ENOG4105ECQ; Bacteria.
DR   eggNOG; COG4977; LUCA.
DR   HOGENOM; HOG000063192; -.
DR   OMA; VMPLERE; -.
DR   OrthoDB; 1459004at2; -.
DR   BioCyc; VPAR595537:G1GQO-547-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 3.40.50.880; -; 1.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR002818; DJ-1/PfpI.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   Pfam; PF01965; DJ-1_PfpI; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF52317; SSF52317; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; E6V5G0.
DR   SWISS-2DPAGE; E6V5G0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917};
KW   Transcription {ECO:0000256|SAAS:SAAS00048810};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00048643}.
FT   DOMAIN      222    320       HTH araC/xylS-type. {ECO:0000259|PROSITE:
FT                                PS01124}.
SQ   SEQUENCE   328 AA;  35958 MW;  E412D0D8D53CE15F CRC64;
     MARTTTTTTE TIAVVAFDGI SPFHLSVPCM VFGEDRTEAG APRFRMRVCA PEPGPLRTNA
     GFDLVVPHGL EAIRRAQIVV VPSWRDDGRP APPALIRALQ AAHRRGATVV GLCLGAFVLA
     EAGLLDGRPA TTHWNLAAAF AKQYPKVSLQ PEVLYVDDGD VLTSAGTAAG IDCCLHLLRV
     RYGAETANRA ARRMVVAPHR QGGQAQYIQQ PMPATAERDR LAPLLEWLGK HLDVPHELDE
     LARRALMSRR TFTRRFREST GTTVGQWIQN QRLALAQRLL ETTDHPVERV ATGAGFGSAV
     SLRKHFTSAF KVSPTVYRRQ FSRTEEAA
//

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