(data stored in ACNUC1104 zone)

SWISSPROT: E6V5H8_VARPE

ID   E6V5H8_VARPE            Unreviewed;       171 AA.
AC   E6V5H8;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   08-MAY-2019, entry version 35.
DE   SubName: Full=Type VI secretion system lysozyme-related protein {ECO:0000313|EMBL:ADU34784.1};
GN   OrderedLocusNames=Varpa_0563 {ECO:0000313|EMBL:ADU34784.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU34784.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
RA   Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P.,
RA   Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU34784.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU34784.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium
RT   Variovorax paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-13(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002417; ADU34784.1; -; Genomic_DNA.
DR   RefSeq; WP_013539030.1; NC_014931.1.
DR   STRING; 595537.Varpa_0563; -.
DR   EnsemblBacteria; ADU34784; ADU34784; Varpa_0563.
DR   GeneID; 29714642; -.
DR   KEGG; vpe:Varpa_0563; -.
DR   eggNOG; ENOG4108QK1; Bacteria.
DR   eggNOG; COG3518; LUCA.
DR   HOGENOM; HOG000255455; -.
DR   KO; K11897; -.
DR   OMA; RIEIVDM; -.
DR   OrthoDB; 1918415at2; -.
DR   BioCyc; VPAR595537:G1GQO-565-MONOMER; -.
DR   Proteomes; UP000008917; Chromosome.
DR   InterPro; IPR007048; IraD/Gp25-like.
DR   InterPro; IPR017737; T6SS-rel.
DR   Pfam; PF04965; GPW_gp25; 1.
DR   TIGRFAMs; TIGR03357; VI_zyme; 1.
PE   4: Predicted;
DR   PRODOM; E6V5H8.
DR   SWISS-2DPAGE; E6V5H8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008917};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008917}.
FT   DOMAIN       39    143       GPW_gp25. {ECO:0000259|Pfam:PF04965}.
SQ   SEQUENCE   171 AA;  19287 MW;  21129D24F5A1FCAF CRC64;
     MGELTAQERL QPSLLDRLVD NAPTEKREGD EKRTLTKQAL RAAVLRDLSW LFNATGFGLA
     MDDKQYPNAA RSVINYGLPM LSGQFTSSVQ RVSMEQALKN AILQFEPRIL SRTLEVELVM
     EGSAMDSHNS IGLQIRGMLW AQPVPLEFLM RSRVDLEEGR IEIVDMAQNP R
//

If you have problems or comments...

PBIL Back to PBIL home page