(data stored in ACNUC13479 zone)

SWISSPROT: TGT3A_ARATH

ID   TGT3A_ARATH             Reviewed;         323 AA.
AC   Q9SDW0;
DT   30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   07-JUN-2017, entry version 118.
DE   RecName: Full=Trihelix transcription factor GT-3a;
DE   AltName: Full=Trihelix DNA-binding protein GT-3a;
GN   Name=GT-3A; Synonyms=GT3A; OrderedLocusNames=At5g01380;
GN   ORFNames=T10O8.90;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, SUBUNIT,
RP   SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND INTERACTION WITH GT-3B.
RC   STRAIN=cv. C24, and cv. Columbia;
RX   PubMed=15044016; DOI=10.1016/S0014-5793(04)00222-4;
RA   Ayadi M., Delaporte V., Li Y.F., Zhou D.X.;
RT   "Analysis of GT-3a identifies a distinct subgroup of trihelix DNA-
RT   binding transcription factors in Arabidopsis.";
RL   FEBS Lett. 562:147-154(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S.,
RA   Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W.,
RA   Ramsperger U., Wedler H., Balke K., Wedler E., Peters S.,
RA   van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R.,
RA   Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W.,
RA   Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H.,
RA   Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Probable transcription factor that binds specifically to
CC       the core DNA sequence 5'-GTTAC-3'. {ECO:0000269|PubMed:15044016}.
CC   -!- SUBUNIT: Homodimer. Heterodimer with GT-3B.
CC       {ECO:0000269|PubMed:15044016}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15044016}.
CC   -!- TISSUE SPECIFICITY: Predominantly expressed in roots and flower
CC       buds. {ECO:0000269|PubMed:15044016}.
DR   EMBL; AF206715; AAF17610.1; -; Genomic_DNA.
DR   EMBL; AY271677; AAP13347.1; -; mRNA.
DR   EMBL; AL161746; CAB81921.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED90334.1; -; Genomic_DNA.
DR   EMBL; BT028926; ABI49473.1; -; mRNA.
DR   PIR; T48160; T48160.
DR   RefSeq; NP_195758.1; NM_120216.4.
DR   UniGene; At.33561; -.
DR   ProteinModelPortal; Q9SDW0; -.
DR   SMR; Q9SDW0; -.
DR   BioGrid; 17171; 2.
DR   IntAct; Q9SDW0; 1.
DR   STRING; 3702.AT5G01380.1; -.
DR   iPTMnet; Q9SDW0; -.
DR   PaxDb; Q9SDW0; -.
DR   PRIDE; Q9SDW0; -.
DR   EnsemblPlants; AT5G01380.1; AT5G01380.1; AT5G01380.
DR   GeneID; 831895; -.
DR   Gramene; AT5G01380.1; AT5G01380.1; AT5G01380.
DR   KEGG; ath:AT5G01380; -.
DR   Araport; AT5G01380; -.
DR   TAIR; locus:2179192; AT5G01380.
DR   eggNOG; KOG4282; Eukaryota.
DR   eggNOG; ENOG410YYXY; LUCA.
DR   HOGENOM; HOG000241002; -.
DR   InParanoid; Q9SDW0; -.
DR   OMA; WSEATEP; -.
DR   OrthoDB; EOG09360QEL; -.
DR   PhylomeDB; Q9SDW0; -.
DR   PRO; PR:Q9SDW0; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9SDW0; baseline and differential.
DR   Genevisible; Q9SDW0; AT.
DR   GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR   GO; GO:0042802; F:identical protein binding; IPI:UniProtKB.
DR   GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; ISS:TAIR.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   InterPro; IPR027775; C2H2_Znf_fam_sub.
DR   InterPro; IPR017877; Myb-like_dom.
DR   InterPro; IPR001005; SANT/Myb.
DR   InterPro; IPR027759; Trihelix_TF_GT3.
DR   PANTHER; PTHR10032; PTHR10032; 1.
DR   PANTHER; PTHR10032:SF234; PTHR10032:SF234; 1.
DR   SMART; SM00717; SANT; 1.
DR   PROSITE; PS50090; MYB_LIKE; 1.
PE   1: Evidence at protein level;
DR   PRODOM; Q9SDW0.
DR   SWISS-2DPAGE; Q9SDW0.
KW   Complete proteome; DNA-binding; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN         1    323       Trihelix transcription factor GT-3a.
FT                                /FTId=PRO_0000401380.
FT   DOMAIN       52    108       Myb-like. {ECO:0000255|PROSITE-
FT                                ProRule:PRU00133}.
FT   COMPBIAS      9     19       His-rich.
FT   COMPBIAS    167    293       Glu-rich.
SQ   SEQUENCE   323 AA;  38273 MW;  7A359042B5B6E10C CRC64;
     MDRRNPFQHH HHHHQLHHHL IQQQQLPPPP LSTTATMDPG GGGGGGERIP QWSIEETKEL
     LAIREELDQT FMETKRNKLL WEVVAAKMAD KGFVRSAEQC KSKWKNLVTR YKACETTEPD
     AIRQQFPFYN EIQSIFEARM QRMLWSEATE PSTSSKRKHH QFSSDDEEEE VDEPNQDINE
     ELLSLVETQK RETEVITTST STNPRKRAKK GKGVASGTKA ETAGNTLKDI LEEFMRQTVK
     MEKEWRDAWE MKEIEREKRE KEWRRRMAEL EEERAATERR WMEREEERRL REEARAQKRD
     SLIDALLNRL NRDHNDDHHN QGF
//

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