(data stored in ACNUC13479 zone)

SWISSPROT: Q6DBH0_ARATH

ID   Q6DBH0_ARATH            Unreviewed;       444 AA.
AC   Q6DBH0;
DT   16-AUG-2004, integrated into UniProtKB/TrEMBL.
DT   16-AUG-2004, sequence version 1.
DT   30-AUG-2017, entry version 126.
DE   SubName: Full=At5g01450 {ECO:0000313|EMBL:AAT71924.1};
DE   SubName: Full=RING/U-box superfamily protein {ECO:0000313|EMBL:AED90346.1};
DE   SubName: Full=Uncharacterized protein At5g01450 {ECO:0000313|EMBL:BAF00891.1};
GN   Name=APD2 {ECO:0000313|EMBL:AED90346.1};
GN   Synonyms=ABERRANT POLLEN DEVELOPMENT 2 {ECO:0000313|EMBL:AED90346.1};
GN   OrderedLocusNames=At5g01450 {ECO:0000313|Araport:AT5G01450,
GN   ECO:0000313|EMBL:AED90346.1};
GN   ORFNames=T10O8.160 {ECO:0000313|EMBL:AED90346.1}, T10O8_160
GN   {ECO:0000313|EMBL:AED90346.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AAT71924.1};
RN   [1] {ECO:0000313|EMBL:AED90346.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:AAT71924.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AAU94421.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:BAF00891.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AED90346.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AED90346.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; BT015052; AAT71924.1; -; mRNA.
DR   EMBL; BT015858; AAU94421.1; -; mRNA.
DR   EMBL; CP002688; AED90346.1; -; Genomic_DNA.
DR   EMBL; AK229004; BAF00891.1; -; mRNA.
DR   RefSeq; NP_195765.3; NM_120223.5.
DR   UniGene; At.4685; -.
DR   STRING; 3702.AT5G01450.1; -.
DR   EnsemblPlants; AT5G01450.1; AT5G01450.1; AT5G01450.
DR   GeneID; 831860; -.
DR   Gramene; AT5G01450.1; AT5G01450.1; AT5G01450.
DR   KEGG; ath:AT5G01450; -.
DR   Araport; AT5G01450; -.
DR   TAIR; locus:2179187; AT5G01450.
DR   eggNOG; KOG4275; Eukaryota.
DR   eggNOG; ENOG41101VR; LUCA.
DR   HOGENOM; HOG000005728; -.
DR   OMA; AYIVCMG; -.
DR   OrthoDB; EOG09360C44; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR032008; DUF4792.
DR   InterPro; IPR032010; DUF4793.
DR   InterPro; IPR001841; Znf_RING.
DR   Pfam; PF16040; DUF4792; 1.
DR   Pfam; PF16041; DUF4793; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q6DBH0.
DR   SWISS-2DPAGE; Q6DBH0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   TRANSMEM     71     93       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    311    332       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      393    432       RING-type. {ECO:0000259|PROSITE:PS50089}.
SQ   SEQUENCE   444 AA;  49277 MW;  F5AEB1A9DEE27241 CRC64;
     MSLPDSLPSS SSSPPVTREE TGFHRFEHHG NDSGFDHRDR PPWNRSEYDY RHGSVVASEN
     VRNNSTSEDP WSCVVVVATF CIFVSMTLIL GLYGTTNVWL GPNSSFLIKP TSVFVQNVIV
     EELGNKGSGL ILYGLNQAPQ LDVLTKWSEV HYLAVPNDSY KYWIQYLNKG SRVKVSYNVE
     SVGSSLYLVI AQGVDGLSEW VQDPTRPDTT LSWHIISDSG YIEQDITKSS SYYVAVGNVY
     LNEVKATIDI QVEGVLYDTT NAYYNCSFPN DKCTLSVPLF GTNAAVLTSP GPKLNNSKNE
     FCAKLSYEPR WIAYIVCMGV VTALLLIVSS LFNKRQPVTE DETVDENDDV APLIPGKDDD
     NSSWCSSYSS ILTSTEELEG AHGEGHSSTR YLCAICYDAP RDCFFLSCGH CVACFQCGTR
     IAETSGFCPV CRKKIRKVKK IFNV
//

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