(data stored in ACNUC13479 zone)

SWISSPROT: PR1B5_ARATH

ID   PR1B5_ARATH             Reviewed;         223 AA.
AC   Q9M012;
DT   14-OCT-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   07-JUN-2017, entry version 74.
DE   RecName: Full=PRA1 family protein B5;
DE            Short=AtPRA1.B5;
GN   Name=PRA1B5; OrderedLocusNames=At5g01640; ORFNames=F7A7.160;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S.,
RA   Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W.,
RA   Ramsperger U., Wedler H., Balke K., Wedler E., Peters S.,
RA   van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R.,
RA   Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W.,
RA   Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H.,
RA   Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
RA   Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
RA   Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
RA   Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
RA   Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
RA   Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
RA   Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
RA   Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
RA   Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
RA   Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
RA   Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   SUBCELLULAR LOCATION, TISSUE SPECIFICITY, INTERACTION WITH PRA1B1;
RP   PRA1B2; PRA1B3; PRA1B4; PRA1B6 AND PRA1E, GENE FAMILY, AND
RP   NOMENCLATURE.
RX   PubMed=18583532; DOI=10.1104/pp.108.122226;
RA   Alvim Kamei C.L., Boruc J., Vandepoele K., Van den Daele H., Maes S.,
RA   Russinova E., Inze D., de Veylder L.;
RT   "The PRA1 gene family in Arabidopsis.";
RL   Plant Physiol. 147:1735-1749(2008).
CC   -!- FUNCTION: May be involved in both secretory and endocytic
CC       intracellular trafficking in the endosomal/prevacuolar
CC       compartments. {ECO:0000250}.
CC   -!- SUBUNIT: Interacts with PRA1B1, PRA1B2, PRA1B3, PRA1B4, PRA1B6 and
CC       PRA1E. {ECO:0000269|PubMed:18583532}.
CC   -!- INTERACTION:
CC       Q9SIY7:PRA1B2; NbExp=4; IntAct=EBI-4430098, EBI-4426093;
CC   -!- SUBCELLULAR LOCATION: Endosome membrane
CC       {ECO:0000269|PubMed:18583532}; Multi-pass membrane protein
CC       {ECO:0000269|PubMed:18583532}.
CC   -!- TISSUE SPECIFICITY: Expressed in roots, lateral roots, lateral
CC       root caps, columella cells, leaves, and shoot apex.
CC       {ECO:0000269|PubMed:18583532}.
CC   -!- SIMILARITY: Belongs to the PRA1 family. {ECO:0000305}.
DR   EMBL; AL161946; CAB82280.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED90370.1; -; Genomic_DNA.
DR   EMBL; BT000918; AAN41318.1; -; mRNA.
DR   PIR; T48185; T48185.
DR   RefSeq; NP_195784.1; NM_120242.3.
DR   UniGene; At.33527; -.
DR   UniGene; At.67934; -.
DR   BioGrid; 16984; 14.
DR   IntAct; Q9M012; 15.
DR   STRING; 3702.AT5G01640.1; -.
DR   PaxDb; Q9M012; -.
DR   EnsemblPlants; AT5G01640.1; AT5G01640.1; AT5G01640.
DR   GeneID; 831708; -.
DR   Gramene; AT5G01640.1; AT5G01640.1; AT5G01640.
DR   KEGG; ath:AT5G01640; -.
DR   Araport; AT5G01640; -.
DR   TAIR; locus:2149815; AT5G01640.
DR   eggNOG; KOG3142; Eukaryota.
DR   eggNOG; COG5130; LUCA.
DR   HOGENOM; HOG000238420; -.
DR   InParanoid; Q9M012; -.
DR   KO; K20359; -.
DR   OMA; CTHAAFR; -.
DR   OrthoDB; EOG09360LCQ; -.
DR   PhylomeDB; Q9M012; -.
DR   PRO; PR:Q9M012; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9M012; baseline and differential.
DR   GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR   GO; GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016192; P:vesicle-mediated transport; IDA:TAIR.
DR   InterPro; IPR004895; Prenylated_rab_accept_PRA1.
DR   Pfam; PF03208; PRA1; 1.
PE   1: Evidence at protein level;
DR   PRODOM; Q9M012.
DR   SWISS-2DPAGE; Q9M012.
KW   Complete proteome; Endosome; Membrane; Reference proteome;
KW   Transmembrane; Transmembrane helix; Transport.
FT   CHAIN         1    223       PRA1 family protein B5.
FT                                /FTId=PRO_0000352254.
FT   TRANSMEM     83    103       Helical. {ECO:0000255}.
FT   TRANSMEM    105    125       Helical. {ECO:0000255}.
FT   TRANSMEM    146    166       Helical. {ECO:0000255}.
FT   TRANSMEM    170    190       Helical. {ECO:0000255}.
FT   TRANSMEM    196    216       Helical. {ECO:0000255}.
SQ   SEQUENCE   223 AA;  23814 MW;  C57A30D4BCE8918F CRC64;
     MVSTNPPVLP ISTTATDTTN QPPIVTAVVE SQPPVVRAFV NGVTETVCGG LSRSRPWSEL
     LDRSAFTKPD SLSEAGTRFR KNSSYFRVNY VCIVALILGF SLLAHPFSLI LLLCLAASWL
     FLYLFRPSDR PLILFGRSFS EYETLGGLIL STIAVIFFTS VGSVLISALM IGIATICVHG
     AFRAPDDLFL DEQDHAASGF LSFIGVPAIP SVAPSASSAA SPV
//

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