(data stored in ACNUC13479 zone)

SWISSPROT: Q8L610_ARATH

ID   Q8L610_ARATH            Unreviewed;       426 AA.
AC   Q8L610;
DT   01-OCT-2002, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2002, sequence version 1.
DT   30-AUG-2017, entry version 116.
DE   SubName: Full=RING/U-box superfamily protein {ECO:0000313|EMBL:AED90414.1};
DE   SubName: Full=Uncharacterized protein At5g01960 {ECO:0000313|EMBL:AAM20562.1};
GN   OrderedLocusNames=At5g01960 {ECO:0000313|Araport:AT5G01960,
GN   ECO:0000313|EMBL:AED90414.1};
GN   ORFNames=T7H20.10 {ECO:0000313|EMBL:AED90414.1}, T7H20_10
GN   {ECO:0000313|EMBL:AED90414.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AAM20562.1};
RN   [1] {ECO:0000313|EMBL:AED90414.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:AAM20562.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H.,
RA   Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J.,
RA   Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K.,
RA   Ecker J., Theologis A., Davis R.W.;
RL   Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AAN15601.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Nguyen M., Karlin-Neumann G., Southwick A., Tripp M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H.,
RA   Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J.,
RA   Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K.,
RA   Ecker J., Theologis A., Davis R.W.;
RL   Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:AED90414.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AED90414.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AY099711; AAM20562.1; -; mRNA.
DR   EMBL; BT000282; AAN15601.1; -; mRNA.
DR   EMBL; CP002688; AED90414.1; -; Genomic_DNA.
DR   RefSeq; NP_568096.1; NM_120274.4.
DR   UniGene; At.48970; -.
DR   UniGene; At.71061; -.
DR   STRING; 3702.AT5G01960.1; -.
DR   EnsemblPlants; AT5G01960.1; AT5G01960.1; AT5G01960.
DR   GeneID; 831906; -.
DR   Gramene; AT5G01960.1; AT5G01960.1; AT5G01960.
DR   KEGG; ath:AT5G01960; -.
DR   Araport; AT5G01960; -.
DR   TAIR; locus:2185088; AT5G01960.
DR   eggNOG; KOG0802; Eukaryota.
DR   eggNOG; KOG4638; Eukaryota.
DR   eggNOG; ENOG4111HH8; LUCA.
DR   HOGENOM; HOG000237544; -.
DR   OMA; VWFRYLV; -.
DR   OrthoDB; EOG09360BAA; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   SMART; SM00184; RING; 1.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q8L610.
DR   SWISS-2DPAGE; Q8L610.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   TRANSMEM    195    216       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    236    261       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    282    302       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      365    403       RING-type. {ECO:0000259|PROSITE:PS50089}.
SQ   SEQUENCE   426 AA;  47791 MW;  B24BF521E9F663D1 CRC64;
     METPGASHDS FRGSPRRNSI LSASNIIQAP ISTLLEYSGL FRARPSPSHE AETLVSDDSS
     GLSNGEVAIR IIGNTEQDAE TDTNALREPG HSELLGSSAT QVDPMGGASE GASQAAPGDP
     AAGDAASRDS PYQRYDIQQA ARWIEQILPF SLLLLVVFIR QHLQGFFVAI WIAAVMFKSN
     DILKKQTALK GERHISALIG ISVAFTAHVV GVYWWFRKDD LLYPLIMLPP KSIPPFWHAI
     FIIVVNDTLV RQASMIFKCF LLMYYKNSRG RNYRKQGQLL TLVEYFMLLY RSLLPTPVWY
     RFFLNKDYGS LFSSLMTGLY LTFKLTSVVE KVQSFFTALK ALSRKEVHYG SYATTEQVNA
     AGDLCAICQE KMHTPILLRC KHMFCEDCVS EWFERERTCP LCRALVKPAD LKSFGDGSTS
     LFFQIF
//

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