(data stored in ACNUC13479 zone)

SWISSPROT: Q9LZN3_ARATH

ID   Q9LZN3_ARATH            Unreviewed;       493 AA.
AC   Q9LZN3;
DT   01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2000, sequence version 1.
DT   30-AUG-2017, entry version 139.
DE   SubName: Full=At5g01980 {ECO:0000313|EMBL:AAY25402.1};
DE   SubName: Full=RING/U-box superfamily protein {ECO:0000313|EMBL:AED90416.1};
DE   SubName: Full=Uncharacterized protein T7H20_30 {ECO:0000313|EMBL:CAB82971.1};
GN   OrderedLocusNames=At5g01980 {ECO:0000313|Araport:AT5G01980,
GN   ECO:0000313|EMBL:AED90416.1};
GN   ORFNames=T7H20.30 {ECO:0000313|EMBL:AED90416.1}, T7H20_30
GN   {ECO:0000313|EMBL:CAB82971.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1] {ECO:0000313|EMBL:AED90416.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:CAB82971.1}
RP   NUCLEOTIDE SEQUENCE.
RA   EU Arabidopsis sequencing project;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAB82971.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bevan M., Peters S.A., van Staveren M., Dirkse W., Stiekema W.,
RA   Bancroft I., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X.;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:AAY25402.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:ABI93936.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AED90416.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:AED90416.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; BT021990; AAY25402.1; -; mRNA.
DR   EMBL; BT029027; ABI93936.1; -; mRNA.
DR   EMBL; CP002688; AED90416.1; -; Genomic_DNA.
DR   EMBL; AL162508; CAB82971.1; -; Genomic_DNA.
DR   PIR; T48219; T48219.
DR   RefSeq; NP_195818.1; NM_120276.5.
DR   UniGene; At.28192; -.
DR   STRING; 3702.AT5G01980.1; -.
DR   EnsemblPlants; AT5G01980.1; AT5G01980.1; AT5G01980.
DR   GeneID; 831911; -.
DR   Gramene; AT5G01980.1; AT5G01980.1; AT5G01980.
DR   KEGG; ath:AT5G01980; -.
DR   Araport; AT5G01980; -.
DR   TAIR; locus:2185108; AT5G01980.
DR   eggNOG; KOG0800; Eukaryota.
DR   eggNOG; ENOG41121N2; LUCA.
DR   HOGENOM; HOG000077556; -.
DR   OMA; CAICKEL; -.
DR   OrthoDB; EOG09360FMF; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR   GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   GO; GO:0000209; P:protein polyubiquitination; IBA:GO_Central.
DR   GO; GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   Pfam; PF13639; zf-RING_2; 1.
DR   SMART; SM00184; RING; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q9LZN3.
DR   SWISS-2DPAGE; Q9LZN3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   TRANSMEM    447    467       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      350    391       RING-type. {ECO:0000259|PROSITE:PS50089}.
SQ   SEQUENCE   493 AA;  55541 MW;  D83D83AFDBAD6CE1 CRC64;
     MESQGPSNGH PMDISSNSIP SSACNLCGRV VQSASDDLEI FSLCVDCKFL LLEDFGTPAP
     PLARRQTIRR RRMRRRRRTT RHDSSESVGV GDLSSQQFTH LISIARQSLS TVQASEDLRD
     DLRTSSHTTP SGSTRWRLFS ESESDDFDNF GETESNASFS LYRFPHADND TISFSAYGGE
     SDASTDRHAD IFVQPDDRSD IDFDTDIDPM RAGLNQWNSD EEDREWEEGA GPSGVAGTRY
     RNYLASPSES YSSMTRFDSP ELERSFRQRI IERRHSLSRN IFTGLEDLDF SPYAANVGDY
     LDERGFDELL EQLAESDNSR RGAPPASVSC VRNLPRVIIA EEHVMKGLVC AICKELFSLR
     NETTQLPCLH LYHAHCIVPW LSARNSCPLC RYELPTDDKD YEEGKRNVLD VSEDSSSSDD
     GTESGEEEYV ERGESESGVS RVSRGRWLFL AAAPVVSLVG VVLAMWLSSP HRRGIAISHS
     QRENRTRRWL PFF
//

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