(data stored in ACNUC8465 zone)

EMBL: AK140101

ID   AK140101; SV 1; linear; mRNA; HTC; MUS; 1050 BP.
XX
AC   AK140101;
XX
DT   06-SEP-2005 (Rel. 85, Created)
DT   07-OCT-2010 (Rel. 106, Last updated, Version 10)
XX
DE   Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
DE   enriched library, clone:B230213J02 product:mitogen activated protein kinase
DE   kinase 2, full insert sequence.
XX
KW   CAP trapper; HTC; HTC_FLI.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RP   1-1050
RA   Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F.,
RA   Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M.,
RA   Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K.,
RA   Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T.,
RA   Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (30-MAR-2004) to the INSDC.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL
RL   :http://www.osc.riken.jp/
XX
RN   [2]
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome
RG   Science Group (Genome Network Project Core Group)
RA   ;
RT   "The Transcriptional Landscape of the Mammalian Genome";
RL   Science, e1252229 309(5740):1559-1563(2005).
XX
RN   [3]
RX   DOI; 10.1126/science.1112009.
RX   PUBMED; 16141073.
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome
RG   Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science, e1252229 309(5740):1564-1566(2005).
XX
RN   [4]
RX   PUBMED; 12466851.
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase
RG   I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420(6915):563-573(2002).
XX
RN   [5]
RX   PUBMED; 11217851.
RG   The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM
RG   Consortium
RA   ;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9.
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100.
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
XX
RN   [8]
RX   DOI; 10.1101/gr.152600.
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
XX
DR   MD5; 6627b6afa44b63bdf6b97502b5a559d8.
XX
CC   cDNA library was prepared and sequenced in Mouse Genome
CC   Encyclopedia Project of Genome Exploration Research Group in Riken
CC   Genomic Sciences Center and Genome Science Laboratory in RIKEN.
CC   Division of Experimental Animal Research in Riken contributed to
CC   prepare mouse tissues.
CC   Please visit our web site for further details.
CC   URL:http://www.osc.riken.jp/
CC   URL:http://fantom.gsc.riken.jp/
CC   clone information is available at:
CC   http://fantom.gsc.riken.jp/3/db/annotate/
CC   main.cgi?masterid=B230213J02
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1050
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="B230213J02"
FT                   /tissue_type="corpora quadrigemina"
FT                   /db_xref="taxon:10090"
FT   CDS_pept        <1..81
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /note="mitogen activated protein kinase kinase 2
FT                   (MGD|MGI:1346867 GB|AK036822, evidence: BLASTN, 99%,
FT                   match=693)"
FT                   /note="putative"
FT                   /note="start codon is not identified"
FT                   /db_xref="MGI:MGI:1346867"
FT                   /db_xref="UniProtKB/TrEMBL:Q3USU3"
FT                   /protein_id="BAE24237.1"
FT                   /translation="EEVDFAGWLCRTLRLKQPSTPTRTAV"
XX
SQ   Sequence 1050 BP; 240 A; 308 C; 295 G; 207 T; 0 other;
     gaggaagtgg acttcgccgg ctggctgtgc agaaccctgc ggctgaagca gcccagcaca        60
     cccacgcgga ctgcagtgtg acagccagcg cccagcagtc tgtgtccttg tccctgtcgg       120
     cacagtgggc cgctgcctct ggggacagtg atgctgtttg ttgtggcagg ggaccctatg       180
     cccatgcatt tgaaaaccaa acaaaatgaa gaaagagaaa gaaagaaaga aagctagctg       240
     cggctgtgct cctgcccatt gcttgttgtg acctcactca gcaggtggaa gaagggcagg       300
     ccaagggatg aggagacact accctcacct cccttcctgg gccccagctc ttgcagtgca       360
     catgcagcct ccttcctagc agggggtgtg ggagcagggg acccctctgg gctccaggga       420
     gcatagctaa ctcagcatag tgcaaaggca gtgccctgca tgagatccgg aggagacccc       480
     agtggatctg ggtcatggaa ctcaatgaga gcctcggcca cagcctgcag ccaccccacc       540
     agggtcccac cctatcccac cagtcagtca gactcagcca cagtggcctg taagggaagc       600
     ctgaggcctc ctgcccacaa tctgaatgaa gagcattcct gctaacacag agagatacac       660
     ttgctaatac agacctggtg gcccgagcac tgtacaagtc tggggagtgt ctgcaccttc       720
     ttgctgcccc tctcagggat gacaaaagta ttcctttttc agatgcccca aggaagccac       780
     catgtggggc ttcacatgct ccagccaggt tgtccaagca ggtgccgtcc accacactgc       840
     tggctgctct tgcactgtgc agggacccct actgcctagg ggtgcccagt gtggtgtggg       900
     agagcaatgc ctactctccg cctctgccat gagctgcatc catccctcac attcctaaat       960
     actaggaagg ctgagtcggg aaaacgacag gttttgggcc actgtgggct acctagtgag      1020
     aatgtcttac atcatggaaa tggtgcaacc                                       1050
//

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