(data stored in ACNUC9306 zone)

EMBL: AK167685

ID   AK167685; SV 1; linear; mRNA; HTC; MUS; 2906 BP.
XX
AC   AK167685;
XX
DT   09-SEP-2005 (Rel. 85, Created)
DT   07-OCT-2010 (Rel. 106, Last updated, Version 10)
XX
DE   Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length
DE   enriched library, clone:I530028H09 product:neurofibromatosis 2, full insert
DE   sequence.
XX
KW   CAP trapper; HTC; HTC_FLI.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RP   1-2906
RA   Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F.,
RA   Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M.,
RA   Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K.,
RA   Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T.,
RA   Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (14-APR-2004) to the INSDC.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL
RL   :http://www.osc.riken.jp/
XX
RN   [2]
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome
RG   Science Group (Genome Network Project Core Group)
RA   ;
RT   "The Transcriptional Landscape of the Mammalian Genome";
RL   Science, e1252229 309(5740):1559-1563(2005).
XX
RN   [3]
RX   DOI; 10.1126/science.1112009.
RX   PUBMED; 16141073.
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome
RG   Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science, e1252229 309(5740):1564-1566(2005).
XX
RN   [4]
RX   PUBMED; 12466851.
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase
RG   I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420(6915):563-573(2002).
XX
RN   [5]
RX   PUBMED; 11217851.
RG   The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM
RG   Consortium
RA   ;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9.
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100.
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
XX
RN   [8]
RX   DOI; 10.1101/gr.152600.
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
XX
DR   MD5; 12a15480ca0f6910f1b2cc1aabb11121.
XX
CC   cDNA library was prepared and sequenced in Mouse Genome
CC   Encyclopedia Project of Genome Exploration Research Group in Riken
CC   Genomic Sciences Center and Genome Science Laboratory in RIKEN.
CC   Division of Experimental Animal Research in Riken contributed to
CC   prepare mouse tissues.
CC   Please visit our web site for further details.
CC   URL:http://www.osc.riken.jp/
CC   URL:http://fantom.gsc.riken.jp/
CC   clone information is available at:
CC   http://fantom.gsc.riken.jp/3/db/annotate/
CC   main.cgi?masterid=I530028H09
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2906
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /dev_stage="14 days pregnant adult"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="I530028H09"
FT                   /tissue_type="placenta"
FT                   /db_xref="taxon:10090"
FT   CDS_pept        185..1441
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /note="neurofibromatosis 2 (MGD|MGI:97307 GB|L27090,
FT                   evidence: BLASTN, 99%, match=1611)"
FT                   /note="putative"
FT                   /db_xref="GOA:Q3TIW4"
FT                   /db_xref="InterPro:IPR000299"
FT                   /db_xref="InterPro:IPR000798"
FT                   /db_xref="InterPro:IPR008954"
FT                   /db_xref="InterPro:IPR011259"
FT                   /db_xref="InterPro:IPR011993"
FT                   /db_xref="InterPro:IPR018980"
FT                   /db_xref="InterPro:IPR019747"
FT                   /db_xref="InterPro:IPR019748"
FT                   /db_xref="InterPro:IPR035963"
FT                   /db_xref="InterPro:IPR041789"
FT                   /db_xref="MGI:MGI:97307"
FT                   /db_xref="UniProtKB/TrEMBL:Q3TIW4"
FT                   /protein_id="BAE39732.1"
FT                   /translation="MTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFT
FT                   IRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDV
FT                   FKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAR
FT                   EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQ
FT                   KAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQ
FT                   EAREAERRAKQKLLEIATKPTYPPMNPIPPPLPPDIPSFDIIADSLSFDFKDTDMKRLS
FT                   MEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERETALDVLHSESSDRGGPSSKHNT
FT                   IKKLTLQSAKSRVAFFEEL"
XX
SQ   Sequence 2906 BP; 740 A; 739 C; 771 G; 656 T; 0 other;
     gccaaggatg gaacatgggg cttgttaact gtcagatgca ggcactagag caacttctgc        60
     cctcagtgat tctccaaggt cattggtacc ttcacagtat ggcgactatg acccctctgt       120
     gcacaagcgg ggatttttag cccaagagga attgctcccg aaaagggtga taaatctcta       180
     tcagatgact ccggaaatgt gggaggagag aattacggct tggtatgcgg agcaccgggg       240
     cagagccagg gatgaagctg aaatggagta tttgaagata gctcaggacc tggagatgta       300
     tggtgtgaac tactttacaa tccggaataa aaagggcaca gagttgctgc ttggagtgga       360
     tgctcttggg cttcatatct atgaccctga gaacaggctg acccccaaga tctccttccc       420
     atggaatgaa atccgaaaca tctcctacag cgacaaggag tttactatta aaccactgga       480
     taagaaaatt gatgtcttca aatttaactc ctcaaagctt cgtgttaata agctgattct       540
     tcagctatgt attgggaacc atgacctatt tatgaggcga cggaaagctg actctttaga       600
     agttcagcag atgaaagccc aggccaggga agagaaggct agaaagcaga tggaaaggca       660
     gcggctggct cgagagaagc agatgcggga ggaggccgag cgtacaagag atgagttaga       720
     gaggaggctc ctgcagatga aagaagaagc aacgatggcc aatgaagctc tgatgcgctc       780
     tgaggagaca gctgatctgt tggctgaaaa ggctcagatc acagaggagg aggccaagct       840
     tttggcacaa aaggctgcag aggctgagca agagatgcag cgaatcaagg ccacggccat       900
     tcggacagag gaggagaagc gcctgatgga gcagaaggtg ctggaggctg aagtgctggc       960
     attgaagatg gctgaggagt cagagaggag ggccaaggag gctgatcagt taaagcaaga      1020
     cttgcaagaa gccagagaag cagagcgaag agccaagcag aagctcttag aaatcgccac      1080
     caagcccacc tatccaccca tgaacccaat tccaccacca ctgcctcctg acataccgag      1140
     cttcgacatt attgctgaca gcttgtcatt tgacttcaag gatacggaca tgaagcgact      1200
     ttccatggag atagagaaag aaaaagtgga gtacatggag aagagcaagc acctgcagga      1260
     gcagctcaac gagctcaaga cggagatcga ggccttgaaa ctcaaagagc gggagacggc      1320
     cttggacgtc ctacacagcg agagctcaga cagaggcggc cccagcagca agcataatac      1380
     cattaaaaag ctcactctgc agagcgccaa gtcccgagtg gccttctttg aagaactcta      1440
     gcaggtgacc cggccacctc ctgccacatc tgctgctcct gacaccaaca ggatgggcct      1500
     gacccaaaag gaaccatcag tagagggctg gcttgtttgg gaactcttga gttgagggcc      1560
     ccgtgccact ctgaccctat agagaggttt ctcaatgtgt tctagttctc cttgcctcct      1620
     gcatacctgc atatctctct ctccctccct ctctctctct ctccttctct ctctctctct      1680
     ctctctctct ctctctctct ctctctctct tatataaata cttgttgtgt gtgggctgcc      1740
     atccttcctg cacccaagca ctgtggtgca cgggttgctg tgcttgctga cattgagaat      1800
     cggctgtggg agtccagtgt gaaagctggc tgaaatctac catgcaggtg ctacccactc      1860
     cccaactggg cttctgggat gggcctcccc tccaagcatg gggtagaagt gtggactggc      1920
     ttagctcaga accagcaatg ggggttgggg atttagctca gtgagagcgc ttactcgggc      1980
     cctgggttcg gtcctcagct ctgggggggg aaaaaaaaag aaccagcaac gatggctcct      2040
     tagccaggct cacctgaggc agtgtagctg tctgaatggc aggtaacagg caagacagct      2100
     gtggctagga agaggcttaa gatagaggct gttgggagac actgcacatg agcctttggt      2160
     gggccaggag cttcccagtc acattcccat cagtgcctgg gaacccagct gtgaccagga      2220
     cctctgtctc ctccccctca gcacatggaa ccccagagcc ctgctacccg tccatcatcc      2280
     tcttcaacac ctaggcctca ctgtcattgt ccttttcttc cccaggagcc cagcagtgtc      2340
     cttttagtcc ttcctttcct gagcctgaca gagatatcag gctactaaca gtcacacaag      2400
     ctaacactat gggttgcctc catgctaggc aacaaatgct taccatgtgc ctcacacact      2460
     ccatgattgg gcctatcttc tatgtaactg gggtcactag tgtagccgac cagaaccctt      2520
     taggtcctac agagcaggtg atctgcctca gtccacaagc agatgtatat taactgagga      2580
     cagctgagct gaggggctga gcaaggcgat gttccacagt acggtttgtt tttgagaaac      2640
     tgaggcacac caccttgttc ccgggctgtt attgggccac tttgtcatag gcagccaccc      2700
     aatggtcacc tcagcatctt tgggcacctg tgatagcact ctagtctgaa acctaaggct      2760
     gaggagaagg tctctggact tgacacccca gtatttgccg agtcttccct ggctgctctg      2820
     aagttgagct gtgttctctg gcctgaaact gctctctgac tttcttcctc tctgtacact      2880
     tgatttaaca atggctgtgg gacacg                                           2906
//

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