(data stored in ACNUC7421 zone)

EMBL: AM412317

ID   AM412317; SV 1; circular; genomic DNA; STD; PRO; 3886916 BP.
XX
AC   AM412317;
XX
PR   Project:PRJNA193;
XX
DT   23-MAY-2007 (Rel. 91, Created)
DT   06-FEB-2015 (Rel. 123, Last updated, Version 5)
XX
DE   Clostridium botulinum A str. ATCC 3502 complete genome
XX
KW   complete genome.
XX
OS   Clostridium botulinum A str. ATCC 3502
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
XX
RN   [1]
RP   1-3886916
RA   Sebaihia M.;
RT   ;
RL   Submitted (21-NOV-2006) to the INSDC.
RL   Sebaihia M., Sulston Laboratories, Wellcome Trust Sanger Institute,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1101/gr.6282807.
RX   PUBMED; 17519437.
RA   Sebaihia M., Peck M.W., Minton N.P., Thomson N.R., Holden M.T.,
RA   Mitchell W.J., Carter A.T., Bentley S.D., Mason D.R., Crossman L.,
RA   Paul C.J., Ivens A., Wells-Bennik M.H., Davis I.J., Cerdeno-Tarraga A.M.,
RA   Churcher C., Quail M.A., Chillingworth T., Feltwell T., Fraser A.,
RA   Goodhead I., Hance Z., Jagels K., Larke N., Maddison M., Moule S.,
RA   Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M.,
RA   White B., Whithead S., Parkhill J.;
RT   "Genome sequence of a proteolytic (Group I) Clostridium botulinum strain
RT   Hall A and comparative analysis of the clostridial genomes";
RL   Genome Res. 17(7):1082-1092(2007).
XX
DR   MD5; 22067aa224ba584fedb295fb995d7a8e.
DR   BioSample; SAMEA1705919.
DR   EuropePMC; PMC1899119; 17519437.
DR   EuropePMC; PMC2493146; 18502928.
DR   EuropePMC; PMC2674064; 19298644.
DR   EuropePMC; PMC2753052; 19684172.
DR   EuropePMC; PMC2764570; 19804621.
DR   EuropePMC; PMC3038992; 21182778.
DR   EuropePMC; PMC3126429; 21378058.
DR   EuropePMC; PMC3416449; 22660717.
DR   EuropePMC; PMC3571330; 23292771.
DR   EuropePMC; PMC4434542; 25981746.
DR   EuropePMC; PMC4540925; 26109442.
DR   EuropePMC; PMC4704661; 26068781.
DR   EuropePMC; PMC5376575; 28421047.
DR   EuropePMC; PMC6373608; 28816652.
DR   EuropePMC; PMC6373612.
DR   RFAM; RF00001; 5S_rRNA.
DR   RFAM; RF00005; tRNA.
DR   RFAM; RF00010; RNaseP_bact_a.
DR   RFAM; RF00023; tmRNA.
DR   RFAM; RF00050; FMN.
DR   RFAM; RF00059; TPP.
DR   RFAM; RF00162; SAM.
DR   RFAM; RF00167; Purine.
DR   RFAM; RF00168; Lysine.
DR   RFAM; RF00169; Bacteria_small_SRP.
DR   RFAM; RF00174; Cobalamin.
DR   RFAM; RF00177; SSU_rRNA_bacteria.
DR   RFAM; RF00230; T-box.
DR   RFAM; RF00234; glmS.
DR   RFAM; RF00379; ydaO-yuaA.
DR   RFAM; RF00380; ykoK.
DR   RFAM; RF00504; Glycine.
DR   RFAM; RF00557; L10_leader.
DR   RFAM; RF00558; L20_leader.
DR   RFAM; RF01071; OLE.
DR   RFAM; RF01118; PK-G12rRNA.
DR   RFAM; RF01316; CRISPR-DR3.
DR   RFAM; RF01731; TwoAYGGAY.
DR   RFAM; RF01749; pan.
DR   RFAM; RF01750; pfl.
DR   RFAM; RF01764; yjdF.
DR   RFAM; RF01831; THF.
DR   RFAM; RF01852; tRNA-Sec.
DR   RFAM; RF01854; Bacteria_large_SRP.
DR   RFAM; RF01959; SSU_rRNA_archaea.
DR   RFAM; RF01990; SECIS_4.
DR   SILVA-LSU; AM412317.
DR   SILVA-SSU; AM412317.
DR   StrainInfo; 719454; 0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3886916
FT                   /organism="Clostridium botulinum A str. ATCC 3502"
FT                   /strain="ATCC 3502"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:413999"
FT   CDS_pept        1..1347
FT                   /transl_table=11
FT                   /gene="dnaA"
FT                   /gene_synonym="dnaH"
FT                   /locus_tag="CBO0001"
FT                   /product="chromosomal replication initiator protein"
FT                   /note="Similar to Bacillus subtilis chromosomal replication
FT                   initiator protein DnaA or DnaH or bsu00010 SWALL:DNAA_BACSU
FT                   (SWALL:P05648) (446 aa) fasta scores: E(): 3.4e-101, 62.52
FT                   38d in 443 aa, and to Clostridium acetobutylicum DNA
FT                   replication initiator protein, ATPase cac0001 SWALL:Q97N35
FT                   (EMBL:AE007513) (446 aa) fasta scores: E(): 3.4e-129, 79.01
FT                   38d in 448 aa"
FT                   /db_xref="GOA:A5HXP7"
FT                   /db_xref="InterPro:IPR001957"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR010921"
FT                   /db_xref="InterPro:IPR013159"
FT                   /db_xref="InterPro:IPR013317"
FT                   /db_xref="InterPro:IPR018312"
FT                   /db_xref="InterPro:IPR020591"
FT                   /db_xref="InterPro:IPR024633"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR038454"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXP7"
FT                   /protein_id="CAL81555.1"
FT                   /translation="MNTHLTETWEKAINIIKGELTEVSFNTWIKSINPISLENNSLKLA
FT                   VPNDFTKGILESRYKDLIVNALKLLTSKKYNIDFIVTTEEKIEENQKNHNNEKSNIVVN
FT                   DEMSTMLNPKYTFDSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHA
FT                   IGHYILHNNPKSQVVYVSSEKFTNELINSIKDDKNVEFRNKYRNIDILLVDDIQFIAGK
FT                   ERTQEEFFHTFNALYEANKQIIISSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETR
FT                   MAILKKKADVENLNIPNEVMVYIATKIKSNIRELEGALIRIVAFSSLTNKEISIDLASE
FT                   ALKDIISSKQTRQVTIDIIQEVVANYYNLKIEDLKSARRTRNIAFPRQIAMYLSRKLTD
FT                   MSLPKIGEEFGGRDHTTVIHAYEKISNNLKKDESLQNAIKELNKRINQK"
FT   misc_feature    331..1272
FT                   /note="Pfam match to entry PF00308 bac_dnaA, Bacterial dnaA
FT                   protein, score 706.0, E-value 1.9e-209"
FT                   /inference="protein motif:Pfam:PF00308"
FT   misc_feature    451..474
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    1213..1272
FT                   /note="PS01008 DnaA protein signature."
FT                   /inference="protein motif:ProSite:PS01008"
FT   CDS_pept        1610..2713
FT                   /transl_table=11
FT                   /gene="dnaN"
FT                   /gene_synonym="dnaG"
FT                   /locus_tag="CBO0002"
FT                   /product="DNA polymerase III, beta chain"
FT                   /EC_number="2.7.7.7"
FT                   /note="Similar to Bacillus subtilis DNA polymerase III,beta
FT                   chain DnaN or DnaG or bsu00020 SWALL:DP3B_BACSU
FT                   (SWALL:P05649) (378 aa) fasta scores: E(): 1.1e-41, 39.78
FT                   id in 377 aa, and to Clostridium tetani DNA polymerase III,
FT                   beta chain ctc00093 SWALL:Q899S6 (EMBL:AE015936) (367 aa)
FT                   fasta scores: E(): 1.2e-94, 70.84 38d in 367 aa"
FT                   /db_xref="GOA:A5HXP8"
FT                   /db_xref="InterPro:IPR001001"
FT                   /db_xref="InterPro:IPR022634"
FT                   /db_xref="InterPro:IPR022635"
FT                   /db_xref="InterPro:IPR022637"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXP8"
FT                   /protein_id="CAL81556.1"
FT                   /translation="MKITCQKNILLEGISIVQKAVTGKSTLPILSGILIRANKNELVLT
FT                   GSDMDLSIETKVKANILEEGTIVLDARLFGEIIRKLPNDLIEINTLEDNSIEIICQNSR
FT                   FNLIYMNPGEFPNPPIINENMIFSIGESKLKNMIKGTIFATAQDETRPILTGVLFQIKD
FT                   KMLNLVALDGYRLALRSEVVDNDNTINAVIPGKTLNEVSKILEEDNENVNITFTPNHIL
FT                   FSIGETKIISRLLEGEFISYKSIIPEEFNLKIIAKRSELLNSIERASLMAKEGNTNLVK
FT                   FDFSDDKIVITSNSQLGMVREELKVVLQGEDLQIAFNSKYLLDVLKTMEDNEVVLEFSS
FT                   SVSPCIIKNTEINNCTYLVLPVRLNNN"
FT   misc_feature    1610..1966
FT                   /note="Pfam match to entry PF00712 DNA_pol3_beta, DNA
FT                   polymerase III beta subunit, N-terminal domain, score
FT                   131.7, E-value 1.4e-36"
FT                   /inference="protein motif:Pfam:PF00712"
FT   misc_feature    1991..2332
FT                   /note="Pfam match to entry PF02767 DNA_pol3_beta_2, DNA
FT                   polymerase III beta subunit, central domain, score
FT                   119.4,E-value 7.1e-33"
FT                   /inference="protein motif:Pfam:PF02767"
FT   misc_feature    2336..2698
FT                   /note="Pfam match to entry PF02768 DNA_pol3_beta_3, DNA
FT                   polymerase III beta subunit, C-terminal domain, score
FT                   126.9, E-value 3.8e-35"
FT                   /inference="protein motif:Pfam:PF02768"
FT   CDS_pept        2732..2938
FT                   /transl_table=11
FT                   /locus_tag="CBO0003"
FT                   /product="putative RNA-binding mediating protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0003 SWALL:Q8XPG0 (EMBL:AP003185) (68 aa) fasta
FT                   scores: E(): 5.1e-16, 66.17 38d in 68 aa, and to
FT                   Clostridium acetobutylicum small conserved protein,ortholog
FT                   of yaaa b.subtilis cac0003 SWALL:Q97N33 (EMBL:AE007513) (68
FT                   aa) fasta scores: E(): 1.2e-14, 64.7 id in 68 aa"
FT                   /db_xref="GOA:A5HXP9"
FT                   /db_xref="InterPro:IPR002942"
FT                   /db_xref="InterPro:IPR014330"
FT                   /db_xref="InterPro:IPR036986"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXP9"
FT                   /protein_id="CAL81557.1"
FT                   /translation="MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIE
FT                   KRRGRKLKIDDLIEFNNETYKII"
FT   misc_feature    2762..2905
FT                   /note="Pfam match to entry PF01479 S4, S4 domain, score
FT                   29.5, E-value 8.4e-06"
FT                   /inference="protein motif:Pfam:PF01479"
FT   CDS_pept        2998..4101
FT                   /transl_table=11
FT                   /gene="recF"
FT                   /locus_tag="CBO0004"
FT                   /product="DNA replication and repair protein"
FT                   /note="Similar to Staphylococcus aureus DNA replication and
FT                   repair protein RecF or sav0004 or sa0004 or mw0004
FT                   SWALL:RECF_STAAM (SWALL:P29232) (370 aa) fasta scores: E():
FT                   1.8e-45, 39.62 38d in 371 aa, and to Clostridium
FT                   perfringens DNA replication and repair protein RecF or
FT                   cpe0004 SWALL:RECF_CLOPE (SWALL:Q8XPF9) (361 aa) fasta
FT                   scores: E(): 2.5e-76, 59.5 38d in 363 aa"
FT                   /db_xref="GOA:A5HXQ0"
FT                   /db_xref="InterPro:IPR001238"
FT                   /db_xref="InterPro:IPR003395"
FT                   /db_xref="InterPro:IPR018078"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR042174"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ0"
FT                   /protein_id="CAL81558.1"
FT                   /translation="MFRMYIKNVHLINFRNYDDMYLELSPNTNIFVGNNAQGKTNILES
FT                   IYYSSIGKSHRTNKDKDLIKWDKNNTYLRTYVSRERLDKTIDINIFKNGKKAITVNKIK
FT                   IKKISELMGNLNVVMFSPEDLRIIKDSPGNRRKFLDIELCKINNVYYHDLVQYNKILSE
FT                   RNTALKNWNNKINDIIDIYDEQLSKYGAFIIKERNKYLDKLNIIGKNIHKKITNDLEDI
FT                   NFRYLTNIKDFDNAEKELLIVLKKNRKKDLERNSTSIGPHRDDFEVSINNIDTRIFGSQ
FT                   GQQRTAVLTLKFASLEIIKNIIGEYPVLLLDDVLSELDSNRQKFVLNSIDKIQTIITCT
FT                   GIEEIDKYLDKKQSQLYLVNNGKIKRV"
FT   misc_feature    3007..3135
FT                   /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N
FT                   terminal domain, score 20.6, E-value 9.8e-06"
FT                   /inference="protein motif:Pfam:PF02463"
FT   misc_feature    3094..3117
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        4122..4385
FT                   /transl_table=11
FT                   /locus_tag="CBO0005"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0005 SWALL:Q8XPF8 (EMBL:AP003185) (86 aa) fasta
FT                   scores: E(): 3.2e-26, 84.7 38d in 85 aa, and to Clostridium
FT                   acetobutylicum orfx SWALL:P94603 (EMBL:U35453) (87 aa)
FT                   fasta scores: E(): 2.5e-25, 82.55 38d in 86 aa"
FT                   /db_xref="InterPro:IPR007169"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ1"
FT                   /protein_id="CAL81559.1"
FT                   /translation="MFLHLGENVVVPIKDVIGIFDMETSMYSSDTIQFLRLAEEDGFVE
FT                   RITKEKPKSFVIAEVDKKSKIYLSPISSATLTKRTKVLYNEL"
FT   CDS_pept        4403..6316
FT                   /transl_table=11
FT                   /gene="gyrB"
FT                   /locus_tag="CBO0006"
FT                   /product="DNA gyrase subunit B"
FT                   /EC_number="5.99.1.3"
FT                   /note="Similar to Clostridium acetobutylicum DNA gyrase
FT                   subunit B GyrB or cac0006 SWALL:GYRB_CLOAB (SWALL:P94604)
FT                   (637 aa) fasta scores: E(): 3.6e-193, 76.8 38d in 638
FT                   aa,and to Clostridium tetani DNA gyrase subunit B ctc00091
FT                   SWALL:Q899S8 (EMBL:AE015936) (637 aa) fasta scores: E():
FT                   1.2e-190, 75.82 38d in 637 aa"
FT                   /db_xref="GOA:A5HXQ2"
FT                   /db_xref="InterPro:IPR001241"
FT                   /db_xref="InterPro:IPR002288"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR006171"
FT                   /db_xref="InterPro:IPR011557"
FT                   /db_xref="InterPro:IPR013506"
FT                   /db_xref="InterPro:IPR013759"
FT                   /db_xref="InterPro:IPR013760"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="InterPro:IPR018522"
FT                   /db_xref="InterPro:IPR020568"
FT                   /db_xref="InterPro:IPR034160"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ2"
FT                   /protein_id="CAL81560.1"
FT                   /translation="MSQENKQVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYE
FT                   IVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAG
FT                   GKFGGGGYKVSGGLHGVGASVVNALSEQCEVEVRREGHIWKQKFERGITKTGLDIVGDT
FT                   EDHGTKIYFKPDIEIFDELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEMFHYEG
FT                   GLRSFVLYLNRNKEKLHQQPIYVDENKDGCIVEIAMQYNDGYAENIFSFANNIDTIEGG
FT                   THLAGFKSALTRVINDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKT
FT                   KLGNGEVRGIVDTIVGQSIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSI
FT                   LESTSLPGKLSDCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQ
FT                   RLDKILASDEIRAMITAFGAGIGKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYR
FT                   YMKELIEEGHVYIAQPPLYRIYKAKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLG
FT                   EMNPEQLWETTMDPEHRTLLQVTVEDAMEADEIFTILMGTKVEPRRDFIESNADKVVNL
FT                   DI"
FT   misc_feature    4502..4933
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 115.1,
FT                   E-value 1.4e-31"
FT                   /inference="protein motif:Pfam:PF02518"
FT   misc_feature    5069..5581
FT                   /note="Pfam match to entry PF00204 DNA_gyraseB, DNA gyrase
FT                   B, score 318.9, E-value 6.2e-93"
FT                   /inference="protein motif:Pfam:PF00204"
FT   misc_feature    5660..5995
FT                   /note="Pfam match to entry PF01751 Toprim, Toprim
FT                   domain,score 26.6, E-value 6e-05"
FT                   /inference="protein motif:Pfam:PF01751"
FT   misc_feature    5672..5698
FT                   /note="PS00177 DNA topoisomerase II signature."
FT                   /inference="protein motif:ProSite:PS00177"
FT   misc_feature    6074..6097
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT                   /inference="protein motif:ProSite:PS00687"
FT   misc_feature    6080..6280
FT                   /note="Pfam match to entry PF00986 DNA_gyraseB_C, DNA
FT                   gyrase B subunit, carboxyl terminus, score 169.7, E-value
FT                   5.1e-48"
FT                   /inference="protein motif:Pfam:PF00986"
FT   CDS_pept        6342..8852
FT                   /transl_table=11
FT                   /gene="gyrA"
FT                   /locus_tag="CBO0007"
FT                   /product="DNA gyrase subunit A"
FT                   /EC_number="5.99.1.3"
FT                   /note="Similar to Clostridium acetobutylicum DNA gyrase
FT                   subunit A GyrA or cac0007 SWALL:GYRA_CLOAB (SWALL:P94605)
FT                   (830 aa) fasta scores: E(): 3.7e-211, 70.19 38d in 832
FT                   aa,and to Clostridium tetani DNA gyrase subunit A ctc00090
FT                   SWALL:Q899S9 (EMBL:AE015936) (813 aa) fasta scores: E():
FT                   1.5e-215, 73.88 38d in 804 aa"
FT                   /db_xref="GOA:A5HXQ3"
FT                   /db_xref="InterPro:IPR002205"
FT                   /db_xref="InterPro:IPR005743"
FT                   /db_xref="InterPro:IPR006691"
FT                   /db_xref="InterPro:IPR013757"
FT                   /db_xref="InterPro:IPR013758"
FT                   /db_xref="InterPro:IPR013760"
FT                   /db_xref="InterPro:IPR035516"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ3"
FT                   /protein_id="CAL81561.1"
FT                   /translation="MLNEGKILPVDVSKEMKKCYIDYAMSVIAGRALPDVRDGLKPVHR
FT                   RIIYSMQGLGLAPEKGYRKCARIVGDVLGKYHPHGDTAVYEALVRMAQNFSIRYTLVDG
FT                   HGNFGSVDGDGAAAMRYTEAKMSKISMELIKDINKNTVDFIPNFDGEEEEPSVLPSRFP
FT                   NLLVNGSSGIAVGMATNIPPHNLTEVIDGIIMLIENEDVNILDLMTKIKGPDFPTSGLI
FT                   VGTRGIREAYETGRGKVIIRAKAEIEEEKGKNKIIVTEIPYQVNKARLIENMANLVKDK
FT                   KINGISDLRDESDRDGMRIVIELKRDANPNIVLNQLYKHTKLQDTFGIIMLALVNNQPQ
FT                   ILNLKEILVNYVEFQKEVIRRRTRFDLDKALARAHILEGLRIALDHIDEVIKLIRASKN
FT                   TAEAKEGLMNNFNLSEKQAQAILDMKLQRLTGLEREKIEEEYKELMEKISYFREILDKE
FT                   ELVLSIIKEELIEIKNKYGDERKTEIVKGEHDIDIEDLIEDKKVIITLTHGGYIKRLDM
FT                   DTYSSQKRGGKGIQATSTKQDDFIENMFVTSTHSTILFFTNRGKVYKLKAYEIPEAGRT
FT                   AKGTNIVNIIPIENNEKIQTVIGLKDIDDMKHFVMCTRNGIIKKTEIKKYSSIRKGGLN
FT                   AINLREDDELIDVKMTKGNNEIIIVTQNGYCIRFNEEDVRPMGRVATGVKGITLREDDK
FT                   AVSMEVVLEDEALLSISENGFGKRTDIEEYPIHRRGGKGVITYKITDKTGPIVGARFIK
FT                   EDDELMLVNSGDVAIRINVSEISKTSRNAMGVKLMRTSEEEKIVAIAKIKSEDIIEEEI
FT                   LNEENLNEENLNEENLNEENLNEE"
FT   misc_feature    6432..7772
FT                   /note="Pfam match to entry PF00521 DNA_topoisoIV, DNA
FT                   gyrase/topoisomerase IV, subunit A, score 1052.5, E-value
FT                   0"
FT                   /inference="protein motif:Pfam:PF00521"
FT   misc_feature    7839..7988
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   51.3,E-value 2.2e-12"
FT                   /inference="protein motif:Pfam:PF03989"
FT   misc_feature    7989..8147
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   55.1,E-value 1.6e-13"
FT                   /inference="protein motif:Pfam:PF03989"
FT   misc_feature    8157..8300
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   43.8,E-value 4.1e-10"
FT                   /inference="protein motif:Pfam:PF03989"
FT   misc_feature    8301..8450
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   67.8,E-value 2.3e-17"
FT                   /inference="protein motif:Pfam:PF03989"
FT   misc_feature    8451..8603
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   52.1,E-value 1.3e-12"
FT                   /inference="protein motif:Pfam:PF03989"
FT   misc_feature    8463..8489
FT                   /note="PS00572 Glycosyl hydrolases family 1 active site."
FT                   /inference="protein motif:ProSite:PS00572"
FT   misc_feature    8604..8753
FT                   /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA
FT                   gyrase C-terminal domain, beta-propeller, score
FT                   55.3,E-value 1.4e-13"
FT                   /inference="protein motif:Pfam:PF03989"
FT   rRNA            9294..10735
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            10989..13890
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            13982..14098
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            14107..14183
FT                   /gene="tRNA Met (CAT)"
FT                   /note="Cove score 95.73"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            14187..14262
FT                   /gene="tRNA Ala (TGC)"
FT                   /note="Cove score 93.93"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        14427..14879
FT                   /transl_table=11
FT                   /locus_tag="CBO0008"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00088 SWALL:Q899T0 (EMBL:AE015936) (167 aa) fasta
FT                   scores: E(): 8.1e-17, 40.78 38d in 152 aa, and to
FT                   Clostridium acetobutylicum predicted hd superfamily
FT                   hydrolase cac0008 SWALL:Q97N30 (EMBL:AE007514) (158 aa)
FT                   fasta scores: E(): 3.6e-16, 45.27 38d in 148 aa"
FT                   /db_xref="InterPro:IPR006674"
FT                   /db_xref="InterPro:IPR006675"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ4"
FT                   /protein_id="CAL81562.1"
FT                   /translation="MEYEDIVYINMHLDNEELKIFNKLSISEQKHSIKVAYDIEKLYEK
FT                   GKYNLTKDEFIKVALLHDIGKLNYKVDIIKKSIIVIMDRITNSRIKKFQNIKSIYVHYN
FT                   HPYLGYCILKQYNKYSEKMLYLIKNHHNENIINKELSLLIYSDNLN"
FT   CDS_pept        14895..15416
FT                   /transl_table=11
FT                   /locus_tag="CBO0009"
FT                   /product="putative small molecule binding protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein, ortholog of yrxa
FT                   b.subtilis cac0009 SWALL:Q97N29 (EMBL:AE007514) (171 aa)
FT                   fasta scores: E(): 1.1e-34, 57.31 38d in 171 aa, and to
FT                   Clostridium tetani transcriptional regulator ctc00087
FT                   SWALL:Q899T1 (EMBL:AE015936) (170 aa) fasta scores: E():
FT                   1.4e-30, 53.25 38d in 169 aa"
FT                   /db_xref="GOA:A5HXQ5"
FT                   /db_xref="InterPro:IPR004173"
FT                   /db_xref="InterPro:IPR013196"
FT                   /db_xref="InterPro:IPR026043"
FT                   /db_xref="InterPro:IPR035922"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ5"
FT                   /protein_id="CAL81563.1"
FT                   /translation="MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILR
FT                   ASGKNIIATPEGYLIPNENKQLIRKIIAVCHDSKDIKDELEVIIKFGGIVEDVVVEHPI
FT                   YGEIKAMLMIKSMYDIDNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIEELN
FT                   QKNYLVDEEV"
FT   misc_feature    15108..15401
FT                   /note="Pfam match to entry PF02829 3H, 3H domain, score
FT                   82.3, E-value 1.1e-21"
FT                   /inference="protein motif:Pfam:PF02829"
FT   CDS_pept        15517..16581
FT                   /transl_table=11
FT                   /locus_tag="CBO0010"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Methanobacterium thermoautotrophicum
FT                   hypothetical protein Mth772 SWALL:O26866 (EMBL:AE000856)
FT                   (375 aa) fasta scores: E(): 2.1e-24, 31.88 38d in 345
FT                   aa,and to Methanosarcina mazei iron-sulfur cluster-binding
FT                   protein mm0611 SWALL:Q8PZ83 (EMBL:AE013286) (376 aa) fasta
FT                   scores: E(): 7.6e-22, 31.37 38d in 357 aa"
FT                   /db_xref="InterPro:IPR007160"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ6"
FT                   /protein_id="CAL81564.1"
FT                   /translation="MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYS
FT                   NNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKA
FT                   AYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNT
FT                   LLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVL
FT                   KEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDP
FT                   TLIKEKCIGCNRCAEVCPEKPYVIDMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIET
FT                   KYSFIGRFLNRDGR"
FT   misc_feature    15517..16248
FT                   /note="Pfam match to entry PF04015 DUF362, Domain of
FT                   unknown function (DUF362), score 107.5, E-value 2.6e-29"
FT                   /inference="protein motif:Pfam:PF04015"
FT   misc_feature    16357..16428
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 27.0, E-value 1.4e-05"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    16378..16413
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    16462..16533
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 23.4, E-value 5.2e-05"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    16483..16518
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   CDS_pept        16586..19267
FT                   /transl_table=11
FT                   /locus_tag="CBO0011"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved membrane
FT                   protein ctc00086 SWALL:Q899T2 (EMBL:AE015936) (887 aa)
FT                   fasta scores: E(): 2.6e-191, 56.71 38d in 894 aa, and to
FT                   Clostridium acetobutylicum hypothetical protein Cac0010
FT                   SWALL:Y010_CLOAB (SWALL:Q97N28) (906 aa) fasta scores: E():
FT                   6.1e-198, 56.57 38d in 905 aa"
FT                   /db_xref="GOA:A5HXQ7"
FT                   /db_xref="InterPro:IPR005372"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXQ7"
FT                   /protein_id="CAL81565.1"
FT                   /translation="MKNKKALFIPLFIIILFIAFFNKIINFIINIKWFKEVNYLAVYFT
FT                   KMRAIIILMIPIFIIFFISIWMYYKSLIINKNKSVVDIGLNKNNYGKKLFFIFNFIVSI
FT                   FLAYIFSSSYWYRILQFNNSVDFNVKDPIFFKDVSFYIFKLPLFESLYKVIISLLLFLV
FT                   ITTFIAYFILEAKYKIQSKKDINLKNINHGIKSFAGKQLAIVSGLIILFISFGHLIKIW
FT                   NLVYSSNGVSFGASYTDVHATLLFYKIIVVITLISSIVTLLSIVKGKFKPVSICIGITI
FT                   FLIVSQNIASFLVQNFIVKSNEKTLEQPYIKNNIDLTRKAFALDDIEIRDFDIKNDLQK
FT                   QDITDNKASIDNIRINSFKPTLEFYNQVQIIRYYYTFNDIDIDRYNINGKYNQVFLAAR
FT                   EIDTDALNPNTWQNRHLIYTHGFGAVMNKVNSVTSEGQPDFVIKDIPPYNKTNIKLANP
FT                   RIYFGEKTNDYVIVNTKINEFDYPKEDSNKTNKYNGHAGIKMSFINRLLFAINKKDINF
FT                   LLSKDIKKDSKIIINRNIVERAKKIAPFLTYDSDPYMVIYNGKIYWIIDAYTTTNRYPY
FT                   SEPYDSINYIRNSAKVVIDSVDGDINFYITDKKDPIVNNYAKIFKGLFKEEKDAPKEIR
FT                   EHFRYPKDLFSIQSKVLGKYHVKDPGVFYNGEDLWEVSKDQKHVEGETNTNDAPYIIMK
FT                   LPDQNKEEMVLLNYFNVMKKDNMIALFGARMDGEQYGKKILYKLPSDKTVYSPYLFKQK
FT                   INQDTNISKELSLWNREGSKVQYGDTIILPIKNSLLYIEPLYLRASGKNSIPEMKRVIL
FT                   SYNDKLVLSSSIQEGIKEIFNSKDNKINDKNEKDSTKTIDDSKLKKAQEYYNKAIEAQK
FT                   NGDWTKYGENINELGNILNSIK"
FT   sig_peptide     16586..16649
FT                   /locus_tag="CBO0011"
FT                   /note="probabilty 0.753, with cleavage site probability
FT                   0.462 between residues 22 and 23"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    16586..18886
FT                   /note="Pfam match to entry PF03699 UPF0182,Uncharacterised
FT                   protein family (UPF0182), score 1042.4,E-value 0"
FT                   /inference="protein motif:Pfam:PF03699"
FT   misc_feature    order(16604..16672,16730..16789,16865..16933,17036..17104,
FT                   17189..17257,17315..17383,17402..17470)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0011 by TMHMM2.0 at aa 7-29, 49-68, 94-116,
FT                   151-173,202-224, 244-266 and 273-295"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        19404..20180
FT                   /transl_table=11
FT                   /locus_tag="CBO0012"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved of erfk family cac0011
FT                   SWALL:Q97N27 (EMBL:AE007514) (286 aa) fasta scores: E():
FT                   2.6e-20, 34.52 38d in 281 aa"
FT                   /db_xref="GOA:A5HXQ8"
FT                   /db_xref="InterPro:IPR005490"
FT                   /db_xref="InterPro:IPR038063"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ8"
FT                   /protein_id="CAL81566.1"
FT                   /translation="MKFKKSVYIVVLTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKS
FT                   EVDRNEMSVFSSNTCFKKTYYINKNKVPVYKNFDCNSEVLYYLYEDDIIVSYKEQNGYI
FT                   FCEEGNLGRKGWIKKNKENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCSTGV
FT                   IGKQDTETPLGIFYITNKGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEK
FT                   DKLGFPTSHGCIRVPMEDSKWLYRNIPNKSLIIIHY"
FT   sig_peptide     19404..19476
FT                   /locus_tag="CBO0012"
FT                   /note="probabilty 0.970, with cleavage site probability
FT                   0.376 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    19791..20174
FT                   /note="Pfam match to entry PF03734
FT                   ErfK_YbiS_YhnG,ErfK/YbiS/YcfS/YnhG, score 56.8, E-value
FT                   4.8e-14"
FT                   /inference="protein motif:Pfam:PF03734"
FT   CDS_pept        20205..21602
FT                   /transl_table=11
FT                   /locus_tag="CBO0013"
FT                   /product="putative dehydrogenase with iron-sulfur domain"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   dehydrogenase with iron-sulfur domain cac0012 SWALL:Q97N26
FT                   (EMBL:AE007514) (467 aa) fasta scores: E(): 1.2e-65,44.63
FT                   38d in 475 aa, and to Clostridium tetani dehydrogenase,
FT                   fad-dependent ctc00083 SWALL:Q899T4 (EMBL:AE015936) (475
FT                   aa) fasta scores: E(): 2.7e-91,55.48 38d in 465 aa"
FT                   /db_xref="GOA:A5HXQ9"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="InterPro:IPR007419"
FT                   /db_xref="InterPro:IPR036188"
FT                   /db_xref="InterPro:IPR041854"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXQ9"
FT                   /protein_id="CAL81567.1"
FT                   /translation="MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFIN
FT                   SSVVYDGVECEDDLAANLELNGNKLMEDIAKKFKIPFKKTGSLIIAQNDNEVYNIENMY
FT                   KKALKRGIKNIEVLTKDEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAFDNG
FT                   VNFKLEEQVLEIQKLSKGYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNY
FT                   LLIEKNSIKEFNNIVVKLGTNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALI
FT                   LDEINEMDINNFYQFPYYDDSIVIDDSLIDKGYIKVIVNHYGQVTMTPYIAKIVTETIV
FT                   SNIKCVLKKEFIDKRRDYYKFNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIR
FT                   RPLGARTLEGIKRRTGAAFGSCQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCR
FT                   IKEFDTI"
FT   misc_feature    20217..20249
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    21345..21518
FT                   /note="Pfam match to entry PF04324 fer2_BFD, BFD-like
FT                   [2Fe-2S] binding domain, score 82.8, E-value 7.1e-22"
FT                   /inference="protein motif:Pfam:PF04324"
FT   CDS_pept        21619..21972
FT                   /transl_table=11
FT                   /locus_tag="CBO0014"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00082 SWALL:Q899T5 (EMBL:AE015936) (133 aa) fasta
FT                   scores: E(): 1.6e-25, 59.01 38d in 122 aa, and to
FT                   Clostridium acetobutylicum uncharacterized small conserved
FT                   protein, ortholog of t.maritima cac0013 SWALL:Q97N25
FT                   (EMBL:AE007514) (76 aa) fasta scores: E(): 3.4e-16, 76.38
FT                   id in 72 aa"
FT                   /db_xref="InterPro:IPR012460"
FT                   /db_xref="InterPro:IPR036593"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR0"
FT                   /protein_id="CAL81568.1"
FT                   /translation="MLREFICNGCNKKCIISLYNSNYNTIKGNQCNLGIDYAKNYVNNT
FT                   KDIFTTLVRIKGSKYNVLPVKSSEPIEKSLWIECSKALSRLYVGYPIEIGDVICKNILN
FT                   TGVDIIAIKNINE"
FT   misc_binding    22071..22279
FT                   /gene="serS"
FT                   /locus_tag="CBO0016"
FT                   /bound_moiety="tRNA"
FT                   /note="T-box leader"
FT   CDS_pept        22342..23622
FT                   /transl_table=11
FT                   /gene="serS"
FT                   /locus_tag="CBO0016"
FT                   /product="seryl-tRNA synthetase"
FT                   /EC_number="6.1.1.11"
FT                   /note="Similar to Clostridium tetani seryl-tRNA synthetase
FT                   ctc00081 SWALL:Q899T6 (EMBL:AE015936) (426 aa) fasta
FT                   scores: E(): 5e-131, 78.63 38d in 426 aa, and to
FT                   Clostridium perfringens seryl-tRNA synthetase SerS or
FT                   cpe0014 SWALL:SYS_CLOPE (SWALL:Q8XPE9) (425 aa) fasta
FT                   scores: E(): 1.4e-125, 74.94 38d in 419 aa"
FT                   /db_xref="GOA:A5HXR1"
FT                   /db_xref="InterPro:IPR002314"
FT                   /db_xref="InterPro:IPR002317"
FT                   /db_xref="InterPro:IPR006195"
FT                   /db_xref="InterPro:IPR010978"
FT                   /db_xref="InterPro:IPR015866"
FT                   /db_xref="InterPro:IPR033729"
FT                   /db_xref="InterPro:IPR042103"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXR1"
FT                   /protein_id="CAL81569.1"
FT                   /translation="MLDLKRIRNNSNEIKESLNNRGEKFDVTVIDEVLKLDEERRNILV
FT                   KVEVLKSKRNQVSSEVPKLKKEGKDVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIML
FT                   RIPNIPNPQVPDGDTDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGS
FT                   RFTFYKGLGARLERSLISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFK
FT                   ISEDDYFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQH
FT                   QFNKVELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLE
FT                   VWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAIL
FT                   ENYQNEDGSVTIPEVLRPYMGGKEAIK"
FT   misc_feature    22342..22491
FT                   /note="Pfam match to entry PF02403 Seryl_tRNA_N,Seryl-tRNA
FT                   synthetase N-terminal domain, score 55.9,E-value 8.9e-14"
FT                   /inference="protein motif:Pfam:PF02403"
FT   misc_feature    22831..23298
FT                   /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA
FT                   synthetase class II core domain (G, H, P, S and T), score
FT                   209.9, E-value 4.1e-60"
FT                   /inference="protein motif:Pfam:PF00587"
FT   misc_feature    23128..23202
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00179"
FT   tRNA            23898..23988
FT                   /gene="tRNA Ser (TGA)"
FT                   /note="Cove score 75.60"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            24009..24099
FT                   /gene="tRNA Ser (GCT)"
FT                   /note="Cove score 71.86"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            24406..24496
FT                   /gene="tRNA Ser (TGA)"
FT                   /note="Cove score 75.60"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            24517..24607
FT                   /gene="tRNA Ser (GCT)"
FT                   /note="Cove score 71.86"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            24692..24768
FT                   /gene="tRNA Arg (ACG)"
FT                   /note="Cove score 78.58"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        complement(join(24804..25562,25565..25690))
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="psd1"
FT                   /locus_tag="CBO0017"
FT                   /product="phosphatidylserine decarboxylase (pseudogene)"
FT                   /EC_number="4.1.1.65"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Escherichia coli O157:H7, and Shigella flexneri
FT                   phosphatidylserine decarboxylase proenzyme Psd or b4160 or
FT                   c5247 or z5766 or ecs5139 or sf4318 or s4582
FT                   SWALL:PSD_ECOLI (SWALL:P10740) (322 aa) fasta scores: E():
FT                   1.3e-18, 31.42 38d in 280 aa, and to Clostridium
FT                   pasteurianum phosphatidylserine decarboxylase proenzyme Psd
FT                   SWALL:PSD_CLOPA (SWALL:Q46192) (296 aa) fasta scores: E():
FT                   1.1e-66, 60.8 38d in 273 aa"
FT                   /note="Also similar to CBO0025 (96.86 38d)"
FT                   /note="This CDS contains a frameshift mutation following
FT                   codon 42"
FT                   /db_xref="PSEUDO:CAL81570.1"
FT   misc_feature    complement(24813..25436)
FT                   /note="Pfam match to entry PF02666
FT                   PS_Dcarbxylase,Phosphatidylserine decarboxylase, score
FT                   218.5, E-value 1e-62"
FT                   /inference="protein motif:Pfam:PF02666"
FT   CDS_pept        complement(25888..25998)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CBO0018"
FT                   /product="putative transposase (partial)"
FT                   /note="Similar to the C-terminal region of Clostridium
FT                   acetobutylicum predicted transposase cac0656 SWALL:Q97LA6
FT                   (EMBL:AE007581) (189 aa) fasta scores: E(): 0.0018, 54.83
FT                   id in 31 aa"
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL81571.1"
FT   CDS_pept        complement(26183..26353)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CBO0019"
FT                   /product="putative transposase (partial)"
FT                   /note="Similar to an internal region of Clostridium
FT                   acetobutylicum predicted transposase cac0657 SWALL:Q97LA5
FT                   (EMBL:AE007581) (334 aa) fasta scores: E(): 1, 47.05 38d in
FT                   34 aa"
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL81572.1"
FT   CDS_pept        26601..26963
FT                   /transl_table=11
FT                   /locus_tag="CBO0020"
FT                   /product="putative exported protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR5"
FT                   /protein_id="CAL81573.1"
FT                   /translation="MSIKKLVLTGILTLSISAPVFAAWNYASITLPRTGAWATISRGAS
FT                   GASQKTQVTRNAYTVNSRIINNGGTVLSGWQSHSSGTGTIRTHYSGAKKGDSVKAQFKT
FT                   NATNVRTTTATIGWQP"
FT   sig_peptide     26601..26664
FT                   /locus_tag="CBO0020"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.466 between residues 22 and 23"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    26619..26687
FT                   /note="1 probable transmembrane helix predicted for CBO0020
FT                   by TMHMM2.0 at aa 7-29"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    26691..26708
FT                   /note="PS00343 Gram-positive cocci surface proteins
FT                   'anchoring' hexapeptide."
FT                   /inference="protein motif:ProSite:PS00343"
FT   CDS_pept        27036..27884
FT                   /transl_table=11
FT                   /locus_tag="CBO0021"
FT                   /product="putative ABC transporter, ATP-binding protein"
FT                   /note="Similar to Bacillus halodurans ABC transporter
FT                   bh0179 SWALL:Q9KGC5 (EMBL:AP001507) (220 aa) fasta scores:
FT                   E(): 1.6e-29, 42.13 38d in 216 aa, and to Streptococcus
FT                   pneumoniae ABC transporter, ATP-binding protein sp0707
FT                   SWALL:Q97RT3 (EMBL:AE007379) (215 aa) fasta scores: E():
FT                   3.2e-28, 45.14 38d in 206 aa"
FT                   /db_xref="GOA:A5HXR6"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR6"
FT                   /protein_id="CAL81574.1"
FT                   /translation="MLENKTVLSVKNLSKSLGNKQVLKNVNLDLERGDIIGITGKNGSG
FT                   KTTLLRIIIGLFYASSGDVIIEGKKLIPGFLGNLPTNVSALIENPNFLPQFTGFQNLKI
FT                   LASIRNKISDEDIRNTMNLVGLSPSNKKNVSKYSLGMKQRLGIAQAIMENPDIILFDEP
FT                   TNALDSDGVKIFTDIVSKMSKSGTSFIMVSHKKEDIDALCNKVYRIENGELNVIDNHKE
FT                   WKIVVNDLVDLENLLKIYPNGNIIERVDNHPCIIYKNDWKDVSQVHEILNKNKINTISI
FT                   E"
FT   misc_feature    27132..27671
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 152.8, E-value 6.3e-43"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    27153..27176
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    27444..27488
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        27893..28726
FT                   /transl_table=11
FT                   /locus_tag="CBO0022"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Staphylococcus epidermidis membrane
FT                   spanning protein se0213 SWALL:Q8CQC3 (EMBL:AE016744) (257
FT                   aa) fasta scores: E(): 0.022, 24.1 38d in 224 aa, and to
FT                   Bacillus cereus bacitracin transport permease protein bcrb
FT                   bc5399 SWALL:Q814M8 (EMBL:AE017015) (330 aa) fasta scores:
FT                   E(): 0.17, 21.07 38d in 261 aa"
FT                   /db_xref="GOA:A5HXR7"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR7"
FT                   /protein_id="CAL81575.1"
FT                   /translation="MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKT
FT                   LILKDYMFESLSYPFYILFVAPLLYCYLIYDIATKDYEGGYITFIISRIENRVSYFISK
FT                   ILLIIITANIYFFMNLFVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQYGI
FT                   YFIGLIAIGISVLVISLLFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSK
FT                   HYPFCFSDSQVDPSYLSYMIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM"
FT   misc_feature    order(27950..28018,28061..28129,28190..28285,28343..28411,
FT                   28415..28483,28628..28696)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0022 by TMHMM2.0 at aa 20-42, 57-79, 100-131,
FT                   151-173,175-197 and 246-268"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        28738..29541
FT                   /transl_table=11
FT                   /locus_tag="CBO0023"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani putative
FT                   membrane-spanning permease ctp35 SWALL:Q899X9
FT                   (EMBL:AF528097) (269 aa) fasta scores: E(): 0.0012, 24.26
FT                   id in 272 aa, and to Bacillus subtilis hypothetical protein
FT                   yybm yybm or bsu40590 SWALL:YYBM_BACSU (SWALL:P37491) (251
FT                   aa) fasta scores: E(): 0.0018, 23.95 id in 263 aa"
FT                   /db_xref="GOA:A5HXR8"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR8"
FT                   /protein_id="CAL81576.1"
FT                   /translation="MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEV
FT                   RPLDFFIKIYGGVHSKFFIFQYIQWIVVICTLLLIIENIINSYKGLDLMIINRSGFRLK
FT                   WWSSKIISLFLLNIIYIIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTINPD
FT                   KVLFMCLCIMLTGFIAISTFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLS
FT                   PLNYPSILDITPNVGNYIKCIILNIVLIIFNTMVGSIFIIKKDIL"
FT   misc_feature    order(28783..28842,28924..28992,29074..29142,29230..29289,
FT                   29326..29385,29464..29523)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0023 by TMHMM2.0 at aa 16-35, 63-85, 113-135,
FT                   165-184,197-216 and 243-262"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        29558..30370
FT                   /transl_table=11
FT                   /locus_tag="CBO0024"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani putative
FT                   membrane-spanning permease ctp34 SWALL:Q899Y0
FT                   (EMBL:AF528097) (271 aa) fasta scores: E(): 5.6e-08,25.67
FT                   38d in 261 aa, and to Bacillus subtilis hypothetical
FT                   protein yybm yybm or bsu40590 SWALL:YYBM_BACSU
FT                   (SWALL:P37491) (251 aa) fasta scores: E(): 0.0006, 23.93 id
FT                   in 259 aa"
FT                   /db_xref="GOA:A5HXR9"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXR9"
FT                   /protein_id="CAL81577.1"
FT                   /translation="MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTP
FT                   TYLKYFFLENHNGFISYLKAMGFVNSYMAIVFPIIILLVVGDSLIEDVKTGFLQFYLTR
FT                   TDWKNYIRSKTIAVSLVSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLYMLN
FT                   PYLYILLICIIFSLISIVIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYS
FT                   FSPVFMCGPFIFERFYSGWEIILYWSVILFLSIYLGFKLFSKNFVFNK"
FT   misc_feature    order(29594..29662,29759..29827,29909..29977,30050..30118,
FT                   30155..30223,30266..30334)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0024 by TMHMM2.0 at aa 13-35, 68-90, 118-140,
FT                   165-187,200-222 and 237-259"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(30610..31497)
FT                   /transl_table=11
FT                   /gene="psd2"
FT                   /locus_tag="CBO0025"
FT                   /product="phosphatidylserine decarboxylase"
FT                   /EC_number="4.1.1.65"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Escherichia coli O157:H7, and Shigella flexneri
FT                   phosphatidylserine decarboxylase proenzyme Psd or b4160 or
FT                   c5247 or z5766 or ecs5139 or sf4318 or s4582
FT                   SWALL:PSD_ECOLI (SWALL:P10740) (322 aa) fasta scores: E():
FT                   3.2e-19, 31.9 38d in 279 aa, and to Clostridium
FT                   pasteurianum phosphatidylserine decarboxylase proenzyme Psd
FT                   SWALL:PSD_CLOPA (SWALL:Q46192) (296 aa) fasta scores: E():
FT                   1.3e-81, 66.66 38d in 294 aa"
FT                   /note="Also similar to CBO0017 (96.86 38d)"
FT                   /db_xref="GOA:A5HXS0"
FT                   /db_xref="InterPro:IPR003817"
FT                   /db_xref="InterPro:IPR033177"
FT                   /db_xref="InterPro:IPR033179"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXS0"
FT                   /protein_id="CAL81578.1"
FT                   /translation="MIKYYNRKNKDYDIEKVAGEKYLNWTYSSPIGMNLLEVFIKKKFF
FT                   SKIYGFYCDRRLSHKKINKFINDFKIDMSLSENQSSNFKCFNDFFTRKLKKEARPIKTD
FT                   KNLLISPGDGKILAYENLNLNSVTEVKGINYSFYELINNDSLAKEYDNGTCLVLRLCPT
FT                   DYHRFHFIDNGICENTIKLKGFYYSVNPIALSKIPSVFCKNKREYSIFHSENFGDIIFM
FT                   EVGATCVGSIIQTYKPNTKILKGDEKGYFKFGGSTVILFFKKNTIKIDNDILNQSKLGY
FT                   ETSVVMGESIGIKK"
FT   misc_feature    complement(30619..31242)
FT                   /note="Pfam match to entry PF02666
FT                   PS_Dcarbxylase,Phosphatidylserine decarboxylase, score
FT                   226.0, E-value 5.7e-65"
FT                   /inference="protein motif:Pfam:PF02666"
FT   CDS_pept        complement(31600..33198)
FT                   /transl_table=11
FT                   /locus_tag="CBO0026"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium pasteurianum hypothetical
FT                   protein in hydrogenase 1 5'region SWALL:YHG1_CLOPA
FT                   (SWALL:Q46189) (530 aa) fasta scores: E(): 5.7e-112,59.81
FT                   38d in 530 aa, and to Clostridium acetobutylicum ABC1
FT                   family protein kinase cac0033 SWALL:Q97N06 (EMBL:AE007516)
FT                   (532 aa) fasta scores: E(): 1.5e-109,57.84 38d in 529 aa"
FT                   /db_xref="GOA:A5HXS1"
FT                   /db_xref="InterPro:IPR004147"
FT                   /db_xref="InterPro:IPR011009"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS1"
FT                   /protein_id="CAL81579.1"
FT                   /translation="MYLNSVQRFKEIIKILAFYGFGHIVDSKFNEDKAPENLRKAFEEL
FT                   GPTFIKIGQILSTRPDILSAPYIKELSKLQDSVPEDNFSDINKIFFEEFNISIEDAFLN
FT                   FNRKPLASASISQVYSAKLHNNEEVIVKIQRPEIKEKMNMDLAILRKIFTLGKIKTFDT
FT                   LIDPKEAIDELINATNLELDFNNEKENIKKFKYFNKNLKCIYVPNTIDKYCSSKIITME
FT                   KIHGFKITDIKSLDKLNYDKKDVAHKLAISILKQIFEDGFFHGDPHPGNIFIYEGKICY
FT                   IDFGIMGTLSSDLKNYLNKAMVAVAFKDVDKLISVLLSIGIKKGYINKNNLFEDINYLF
FT                   DIYLSTPLKNIKMSTMLQEVFECANRNNISLPKELTMLIRSLIIIEGILEKIDPNIQIL
FT                   DIAIPYVENNNKVNFFKNIDLDELILNSYKTAEDLSKIPTKTVQLLNSILNGRSKIQLN
FT                   VNNLDRSINELNKMINRIVFALIISSMIIGFSFILNSNIGPKFYDISIIGILGYLIAAF
FT                   MGFWLLISIIKSGKL"
FT   misc_feature    complement(order(31618..31686,31705..31773))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0026 by TMHMM2.0 at aa 476-498 and 505-527"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(32569..32925)
FT                   /note="Pfam match to entry PF03109 ABC1, ABC1 family,score
FT                   108.2, E-value 1.7e-29"
FT                   /inference="protein motif:Pfam:PF03109"
FT   CDS_pept        complement(33274..33594)
FT                   /transl_table=11
FT                   /locus_tag="CBO0027"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac0034 SWALL:Q97N05 (EMBL:AE007517) (101 aa) fasta
FT                   scores: E(): 3.8e-11, 48.51 38d in 101 aa, and to
FT                   Clostridium perfringens hypothetical protein Cpe2529
FT                   SWALL:Q8XHF6 (EMBL:AP003194) (112 aa) fasta scores: E():
FT                   4.4e-08, 42.85 38d in 112 aa"
FT                   /db_xref="InterPro:IPR008769"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS2"
FT                   /protein_id="CAL81580.1"
FT                   /translation="MINEFKNILLAGIGSAAYTYEKASNLVDEMVQKGKITVNEGKELS
FT                   QELKRTIDENKESKNSSEEKQLTREDIISIFNELNFVNKNDLNDINNKIKSLEDKISQL
FT                   EK"
FT   tRNA            33779..33855
FT                   /gene="tRNA Arg (CCT)"
FT                   /note="Cove score 76.78"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        33989..35527
FT                   /transl_table=11
FT                   /locus_tag="CBO0028"
FT                   /product="probable regulatory protein"
FT                   /note="Similar to Clostridium beijerinckii
FT                   signal-transduction and transcriptional-control protein Stc
FT                   SWALL:STC_CLOBE (SWALL:P26047) (632 aa) fasta scores: E():
FT                   6.9e-53, 40.21 38d in 460 aa, and to Clostridium tetani
FT                   transcriptional regulator ctc02531 SWALL:Q890V4
FT                   (EMBL:AE015944) (519 aa) fasta scores: E(): 9.9e-83,50.58
FT                   38d in 514 aa"
FT                   /db_xref="GOA:A5HXS3"
FT                   /db_xref="InterPro:IPR002078"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR025662"
FT                   /db_xref="InterPro:IPR025943"
FT                   /db_xref="InterPro:IPR025944"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR030828"
FT                   /db_xref="InterPro:IPR035965"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS3"
FT                   /protein_id="CAL81581.1"
FT                   /translation="MKLEIITEDRLGMVLDILNVLYNESMDIKSLEVFSKKIYIKINKK
FT                   ISYNKNMIIKKIKNIKGVVRVKKIDILPYEKDEKKLFTIIDSLEEGVIFVNEKCQVEVF
FT                   NKYCENLFNTLKENAIRKHIKEILGQNQLILDALKMGKDYDNLQVFINNKDRKGMYVST
FT                   ARAIKDDKNKTIGFVILIKDLKETIEIVNSIKYKEDEAFKGIIGKSICIDNLKEICKSV
FT                   AKTNSTVLICGESGTGKELFAKAIYKLSLRNNKNFVTVNCAGLQDNLIESELFGYEAGS
FT                   FTGAKSNGKEGFFKLADKGTIFLDEIGELPLNIQCKFLRVLQEGTIRKIGSTKEEKIDV
FT                   RIIAATNKNLEEMVLNGKFREDLYYRLNVVPIEIPPLRERKEDIQLLVDNFVKALNKSL
FT                   NKNIRYIDKKFINKLLKYNFPGNIRELQNIIERTMNLCSDNILSDKNLSINTNITLNND
FT                   SGALLLQDIVEKAEKCAIQKVMNEYKSLRKVGKVLGVSHTTVMNKIKKYGIVCK"
FT   misc_feature    33989..34204
FT                   /note="Pfam match to entry PF01842 ACT, ACT domain, score
FT                   20.7, E-value 0.0036"
FT                   /inference="protein motif:Pfam:PF01842"
FT   misc_feature    34601..35269
FT                   /note="Pfam match to entry PF00158 Sigma54_activat,Sigma-54
FT                   interaction domain, score 409.7, E-value 2.9e-120"
FT                   /inference="protein motif:Pfam:PF00158"
FT   misc_feature    34673..34714
FT                   /note="PS00675 Sigma-54 interaction domain ATP-binding
FT                   region A signature."
FT                   /inference="protein motif:ProSite:PS00675"
FT   misc_feature    34862..34909
FT                   /note="PS00676 Sigma-54 interaction domain ATP-binding
FT                   region B signature."
FT                   /inference="protein motif:ProSite:PS00676"
FT   misc_feature    35243..35272
FT                   /note="PS00688 Sigma-54 interaction domain C-terminal part
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00688"
FT   misc_feature    35438..35503
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1652.000, SD 4.81 at aa 484-505, sequence
FT                   KSLRKVGKVLGVSHTTVMNKIK"
FT   CDS_pept        35687..36889
FT                   /transl_table=11
FT                   /gene="mdeA"
FT                   /locus_tag="CBO0029"
FT                   /product="methionine gamma-lyase"
FT                   /EC_number="4.4.1.11"
FT                   /note="Similar to Pseudomonas putida methionine gamma-lyase
FT                   MdeA SWALL:MEGL_PSEPU (SWALL:P13254) (398 aa) fasta scores:
FT                   E(): 3e-82, 53.03 38d in 396 aa, and to Clostridium tetani
FT                   cys/met metabolism lyase ctc02530 SWALL:Q890V5
FT                   (EMBL:AE015944) (398 aa) fasta scores: E(): 3.2e-115, 73.61
FT                   38d in 398 aa"
FT                   /db_xref="GOA:A5HXS4"
FT                   /db_xref="InterPro:IPR000277"
FT                   /db_xref="InterPro:IPR006237"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS4"
FT                   /protein_id="CAL81582.1"
FT                   /translation="MENIKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQG
FT                   GRRFAGEESGYIYSRLGNPTSTEVENKLALLECGEAAVVAASGMGAIAASLWSALKSGD
FT                   HVVASDTLYGCTFALLNHGLTRYGVEVTFVDVSNLDEVRNALKANTKVVYLETPANPTL
FT                   KVTDIKQISNMVHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIA
FT                   GFAVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQLRMEKHCKNAMEVAKFL
FT                   ESHPAVKKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAV
FT                   SLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIISDLKQALDLIV
FT                   K"
FT   misc_feature    35714..36874
FT                   /note="Pfam match to entry PF01053 Cys_Met_Meta_PP,Cys/Met
FT                   metabolism PLP-dependent enzyme, score 774.1,E-value
FT                   5.9e-230"
FT                   /inference="protein motif:Pfam:PF01053"
FT   misc_feature    36296..36340
FT                   /note="PS00868 Cys/Met metabolism enzymes
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:ProSite:PS00868"
FT   CDS_pept        37013..37450
FT                   /transl_table=11
FT                   /locus_tag="CBO0030"
FT                   /product="putative cytosine deaminase"
FT                   /note="Similar to Clostridium acetobutylicum cytosine
FT                   deaminase cac0123 SWALL:Q97MR8 (EMBL:AE007525) (147 aa)
FT                   fasta scores: E(): 1.8e-35, 63.88 38d in 144 aa, and to
FT                   Clostridium tetani cytosine deaminase ctc00078 SWALL:Q899T9
FT                   (EMBL:AE015936) (146 aa) fasta scores: E(): 3.3e-35, 60.56
FT                   38d in 142 aa"
FT                   /db_xref="GOA:A5HXS5"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="InterPro:IPR028883"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS5"
FT                   /protein_id="CAL81583.1"
FT                   /translation="MNDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLK
FT                   DPTAHAEILAIKEACNTIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVG
FT                   GACGSVVNITNNSYLKNNLNIKWLYDDECSRIITNFFKNIR"
FT   misc_feature    37013..37309
FT                   /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine
FT                   and deoxycytidylate deaminase zinc-binding region, score
FT                   115.8, E-value 8.3e-32"
FT                   /inference="protein motif:Pfam:PF00383"
FT   misc_feature    37160..37273
FT                   /note="PS00903 Cytidine and deoxycytidylate deaminases
FT                   zinc-binding region signature."
FT                   /inference="protein motif:ProSite:PS00903"
FT   tRNA            37616..37705
FT                   /gene="tRNA Ser (GGA)"
FT                   /note="Cove score 75.88"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   misc_RNA        37829..37931
FT                   /note="SRP_bact RNA"
FT   CDS_pept        38095..39720
FT                   /transl_table=11
FT                   /gene="dnaX"
FT                   /gene_synonym="dnaH"
FT                   /locus_tag="CBO0031"
FT                   /product="DNA polymerase III subunit gamma/tau"
FT                   /EC_number="2.7.7.7"
FT                   /note="Similar to Bacillus subtilis DNA polymerase III
FT                   subunit gamma/tau DnaX or DnaH or bsu00190 SWALL:DP3X_BACSU
FT                   (SWALL:P09122) (563 aa) fasta scores: E(): 1.7e-51, 35.58
FT                   38d in 548 aa, and to Clostridium tetani DNA polymerase III
FT                   subunits gamma and tau ctc00075 SWALL:Q899U1
FT                   (EMBL:AE015936) (552 aa) fasta scores: E(): 5.2e-120, 64.42
FT                   38d in 551 aa"
FT                   /db_xref="GOA:A5HXS6"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR008921"
FT                   /db_xref="InterPro:IPR012763"
FT                   /db_xref="InterPro:IPR022754"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS6"
FT                   /protein_id="CAL81584.1"
FT                   /translation="MGYTALYREWRPRTFKEVVGQKHITVTLKNQVIEKRIAHAYLFCG
FT                   TRGTGKTSTAKILSKAVNCLNPKDGEPCNECEICNKINSGTLMDVIEMDAASKRKLEDI
FT                   KEVIENVKYPPQEGKNKVYIMDEVHMLTQEAVNAFLKTLEEPPSNVIFILATTDPQKLP
FT                   ITILSRCQRFDFRRIRNEEIFERLRAIVSEQGIYADDKSLNLIARMSDGAMRDALSILD
FT                   QVISTGDGKVEYDQVLDMLGLVTNENLLRITNSIIEKDVEKSMRIIEDIVLSGKDIYNF
FT                   IKDMITHLRNILMVKVSKNPNEILDMSSENIDLVKEQSEKIRIEEIMRNIKILQEAEQQ
FT                   SKWVKQNRIYLELAVLKMCKIEYDTSKEVILSRLNKIEELIKSGNIKLAINEEKKKIEP
FT                   KEFNLKREKESMQHSKIEKNSLEDYNKDSKLTVETVKKMWHDILEAFKARRLMVLYAAL
FT                   VTANITDCKEGIITLNYNKQYSFNKKRLEKPENNKVVQEIFSEVLKEKIRIIYIVEEKA
FT                   KEENLPEEILKNTFGENILEIIDE"
FT   misc_feature    38212..38784
FT                   /note="Pfam match to entry PF00004 AAA, ATPase family
FT                   associated with various cellular activities (AAA), score
FT                   51.6, E-value 1.9e-12"
FT                   /inference="protein motif:Pfam:PF00004"
FT   misc_feature    38227..38250
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        39785..40126
FT                   /transl_table=11
FT                   /locus_tag="CBO0032"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani transcriptional
FT                   regulatory protein ctc00074 SWALL:Q899U2 (EMBL:AE015936)
FT                   (113 aa) fasta scores: E(): 3.4e-29, 76.99 38d in 113
FT                   aa,and to Clostridium acetobutylicum hypothetical upf0133
FT                   protein Cac0126 SWALL:Y126_CLOAB (SWALL:Q97MR5) (112 aa)
FT                   fasta scores: E(): 6.8e-27, 72.32 38d in 112 aa"
FT                   /db_xref="GOA:A5HXS7"
FT                   /db_xref="InterPro:IPR004401"
FT                   /db_xref="InterPro:IPR036894"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXS7"
FT                   /protein_id="CAL81585.1"
FT                   /translation="MARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVG
FT                   GGAVTAVANGKKQIVDIKIEPEVVDEDDIEMLEDLIMSACNEALKKAEEDTSSEVKRLT
FT                   GGMNLPGMF"
FT   misc_feature    39836..40114
FT                   /note="Pfam match to entry PF02575 DUF149, Uncharacterised
FT                   BCR, YbaB family COG0718, score 150.9, E-value 2.3e-42"
FT                   /inference="protein motif:Pfam:PF02575"
FT   CDS_pept        40159..40755
FT                   /transl_table=11
FT                   /gene="recR"
FT                   /gene_synonym="recM"
FT                   /gene_synonym="recD"
FT                   /locus_tag="CBO0033"
FT                   /product="recombination protein"
FT                   /note="Similar to Bacillus subtilis recombination protein
FT                   RecR or RecM or RecD or bsu00210 SWALL:RECR_BACSU
FT                   (SWALL:P24277) (198 aa) fasta scores: E(): 1.8e-46, 64.79
FT                   id in 196 aa, and to Clostridium tetani recombination
FT                   protein RecR or ctc00073 SWALL:Q899U3 (EMBL:AE015936) (198
FT                   aa) fasta scores: E(): 3.8e-64, 86.86 38d in 198 aa"
FT                   /db_xref="GOA:A5HXS8"
FT                   /db_xref="InterPro:IPR000093"
FT                   /db_xref="InterPro:IPR006171"
FT                   /db_xref="InterPro:IPR015967"
FT                   /db_xref="InterPro:IPR023627"
FT                   /db_xref="InterPro:IPR023628"
FT                   /db_xref="InterPro:IPR034137"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXS8"
FT                   /protein_id="CAL81586.1"
FT                   /translation="MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFS
FT                   EALVKARGTIKYCSVCGNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGV
FT                   YHVLHGNISPMAGRGPEDIKLKELIRRIDGSVNEVIVATNPNVEGEATAMYISKILKPL
FT                   GVKVTRIAHGVPVGGDLEYADEVTLAKALEGRIEL"
FT   misc_feature    40273..40398
FT                   /note="Pfam match to entry PF02132 RecR, RecR protein,score
FT                   67.6, E-value 2.7e-17"
FT                   /inference="protein motif:Pfam:PF02132"
FT   misc_feature    40330..40392
FT                   /note="PS01300 RecR protein signature."
FT                   /inference="protein motif:ProSite:PS01300"
FT   misc_feature    40399..40677
FT                   /note="Pfam match to entry PF01751 Toprim, Toprim
FT                   domain,score 72.8, E-value 7.3e-19"
FT                   /inference="protein motif:Pfam:PF01751"
FT   CDS_pept        40785..41075
FT                   /transl_table=11
FT                   /locus_tag="CBO0034"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   hypothetical protein Tte0043 SWALL:Q8RDI2 (EMBL:AE012979)
FT                   (90 aa) fasta scores: E(): 2e-05, 42.02 38d in 69 aa, and
FT                   to Clostridium perfringens hypothetical protein Cpe0048
FT                   SWALL:Q8XPB7 (EMBL:AP003185) (92 aa) fasta scores: E():
FT                   2.8e-05, 37.8 38d in 82 aa"
FT                   /db_xref="InterPro:IPR019644"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXS9"
FT                   /protein_id="CAL81587.1"
FT                   /translation="MSIIEIGDKMGGFFIMKKLNDGKNEKKLLLESIDSVISEINNIRR
FT                   LFENASDPKLIDYAIYMEEALKAKYIYLLKEAKEEGIKVEYCDTIKEVEVG"
FT   CDS_pept        41225..41485
FT                   /transl_table=11
FT                   /gene="bofA"
FT                   /locus_tag="CBO0035"
FT                   /product="sigma-K factor processing regulatory protein"
FT                   /note="Similar to Bacillus subtilis sigma-K factor
FT                   processing regulatory protein BofA or bsu00230
FT                   SWALL:BOFA_BACSU (SWALL:P24282) (87 aa) fasta scores: E():
FT                   0.0036, 32.92 38d in 82 aa, and to Clostridium
FT                   acetobutylicum BofA b.subtilis ortholog, sigmak-factor
FT                   processing regulatory protein cac0129 SWALL:Q97MR2
FT                   (EMBL:AE007525) (90 aa) fasta scores: E(): 2.3e-14, 54.76
FT                   id in 84 aa"
FT                   /db_xref="GOA:A5HXT0"
FT                   /db_xref="InterPro:IPR010001"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT0"
FT                   /protein_id="CAL81588.1"
FT                   /translation="MGIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLF
FT                   ILNVIGGAFNFYIGINIWTALIAGFFGIPGVIFLIIFKLFL"
FT   misc_feature    order(41237..41305,41315..41383,41402..41470)
FT                   /note="3 probable transmembrane helices predicted for
FT                   CBO0035 by TMHMM2.0 at aa 5-27, 31-53 and 60-82"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        41636..42328
FT                   /transl_table=11
FT                   /gene="sfsA"
FT                   /locus_tag="CBO0036"
FT                   /product="sugar fermentation stimulation protein"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 sugar fermentation stimulation protein A SfsA or
FT                   Sfs1 or b0146 or z0157 or ecs0150 SWALL:SFSA_ECOLI
FT                   (SWALL:P18273) (234 aa) fasta scores: E(): 4.1e-18, 31.06
FT                   id in 235 aa, and to Clostridium tetani sugar fermentation
FT                   stimulation protein ctc00070 SWALL:Q899U6 (EMBL:AE015936)
FT                   (230 aa) fasta scores: E(): 1.2e-56, 70.3 38d in 229 aa"
FT                   /db_xref="GOA:A5HXT1"
FT                   /db_xref="InterPro:IPR005224"
FT                   /db_xref="InterPro:IPR040452"
FT                   /db_xref="InterPro:IPR041465"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXT1"
FT                   /protein_id="CAL81589.1"
FT                   /translation="MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILI
FT                   PGSMVILREENNENRKTRYDLIAGYKGDMLINIDSQIPNKVVHEALMNLKIDILKEYTN
FT                   IKREKTFGKSRFDFKLEKENGEIYYLEVKGVTLENDGLTMFPDAPTERGTKHILELIDV
FT                   KNKGMGAGVLFLIQLNGVKKFTPHHKMDKNFGEALRLAKEKGVDILAYDCLVEESSISL
FT                   NNPISIEI"
FT   misc_feature    41672..42316
FT                   /note="Pfam match to entry PF03749 SfsA, Sugar fermentation
FT                   stimulation protein, score 255.5, E-value 7.6e-74"
FT                   /inference="protein motif:Pfam:PF03749"
FT   CDS_pept        42384..42872
FT                   /transl_table=11
FT                   /locus_tag="CBO0037"
FT                   /product="putative NUDIX-family hydrolase"
FT                   /note="Similar to Clostridium tetani predicted NADH
FT                   pyrophosphatase ctc00069 SWALL:Q899U7 (EMBL:AE015936) (175
FT                   aa) fasta scores: E(): 5.5e-45, 70 38d in 160 aa, and to
FT                   Clostridium acetobutylicum N-terminal Zn-ribbon domain and
FT                   C-terminal MutT domain, yjad ortholog cac0145 SWALL:Q97MP7
FT                   (EMBL:AE007526) (174 aa) fasta scores: E(): 4.7e-34,54.37
FT                   38d in 160 aa"
FT                   /db_xref="GOA:A5HXT2"
FT                   /db_xref="InterPro:IPR000086"
FT                   /db_xref="InterPro:IPR015797"
FT                   /db_xref="InterPro:IPR020084"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT2"
FT                   /protein_id="CAL81590.1"
FT                   /translation="MKFKYCPLCGEKLIEKYSWDEGGVPYCKRHNIMYFDTPKPCIVVG
FT                   VLKEDHVLLLKQSYIFKNSKVLLSGYVSSGETVEETVYREVKEEAGINIKDLRYLGSDY
FT                   LESKDIVMLTFMATYKDGILNKSEEVEWIDWIPIEEAIDHMEEDEIGKKIIKKIMKNC"
FT   misc_feature    42495..42866
FT                   /note="Pfam match to entry PF00293 NUDIX, NUDIX
FT                   domain,score 50.3, E-value 4.4e-12"
FT                   /inference="protein motif:Pfam:PF00293"
FT   misc_feature    42591..42650
FT                   /note="PS00893 mutT domain signature."
FT                   /inference="protein motif:ProSite:PS00893"
FT   CDS_pept        42990..43712
FT                   /transl_table=11
FT                   /locus_tag="CBO0038"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   enzyme with TIM-barrel fold cac0148 SWALL:Q97MP4
FT                   (EMBL:AE007526) (228 aa) fasta scores: E(): 1.9e-61,73.79
FT                   38d in 229 aa, and to Thermoanaerobacter tengcongensis
FT                   hypothetical protein Tte2521 SWALL:Q8R798 (EMBL:AE013193)
FT                   (227 aa) fasta scores: E(): 7.2e-52, 69.3 id in 215 aa"
FT                   /db_xref="GOA:A5HXT3"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT3"
FT                   /protein_id="CAL81591.1"
FT                   /translation="MSNKIEKTPKRVPEIKGVLRSHMIEVPSIIREASGIRVFGKRIKS
FT                   FVYSTDVAVIKNTNADAVIAVYPFTPQPIITQSLVLAADIPVFCGVGGGLTTGKRVVNL
FT                   ALDAEFKGAMGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNIS
FT                   GAKKTAYIVREIRKRYPDFPIIATGGPNEASIKETIEAGANAITYTPPPASDIFSEVMD
FT                   KYRVNFKKEHDREENEQS"
FT   CDS_pept        43846..44634
FT                   /transl_table=11
FT                   /locus_tag="CBO0039"
FT                   /product="putative 4Fe-4S ferredoxin"
FT                   /note="Similar to Clostridium tetani putative
FT                   polyferredoxin ctc00067 SWALL:Q899U9 (EMBL:AE015936) (258
FT                   aa) fasta scores: E(): 2.3e-44, 50.95 38d in 263 aa, and to
FT                   Clostridium acetobutylicum polyferredoxin cac2657
FT                   SWALL:Q97FS0 (EMBL:AE007763) (249 aa) fasta scores: E():
FT                   4.7e-20, 35.65 38d in 258 aa"
FT                   /db_xref="GOA:A5HXT4"
FT                   /db_xref="InterPro:IPR001226"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="InterPro:IPR026816"
FT                   /db_xref="InterPro:IPR029039"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT4"
FT                   /protein_id="CAL81592.1"
FT                   /translation="MNGMLFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVL
FT                   IKIHNYDFIIIGTPIYAEMGPKLIQDFVNNIPKVKEKIKCILYSTQGGNSGCETESMHK
FT                   ILCNKGYDVVIKVNIKMINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGEVYL
FT                   ENINKTRLFLGKIASKGFNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVF
FT                   HSNCILCLRCIYICPSNAIVYKEKRIDQIEKNIIKLLDIK"
FT   misc_feature    43858..43908
FT                   /note="PS00201 Flavodoxin signature."
FT                   /inference="protein motif:ProSite:PS00201"
FT   misc_feature    44416..44487
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 23.5, E-value 5.1e-05"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    44437..44472
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    44500..44571
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 24.6, E-value 3.3e-05"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    44521..44556
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   CDS_pept        45197..45901
FT                   /transl_table=11
FT                   /locus_tag="CBO0040"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani dinucleotide-utilizing
FT                   enzyme ctc00868 SWALL:Q896X5 (EMBL:AE015939) (246 aa) fasta
FT                   scores: E(): 1.3e-49,58.75 38d in 240 aa, and to
FT                   Clostridium acetobutylicum dinucleotide-utilizing enzyme
FT                   involved in molybdopterin and thiamine biosynthesis family
FT                   1 cac0908 SWALL:Q97KK9 (EMBL:AE007606) (251 aa) fasta
FT                   scores: E(): 6.3e-46,58.87 38d in 248 aa"
FT                   /db_xref="GOA:A5HXT5"
FT                   /db_xref="InterPro:IPR000594"
FT                   /db_xref="InterPro:IPR035985"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT5"
FT                   /protein_id="CAL81593.1"
FT                   /translation="MENWLQRTEFLIGKEAIEKLNKSKIVVLGVGGVGSFVIEALVRSG
FT                   VGNITIVDNDTIDITNINRQIHANLNTVGKSKVEVMKERILSINPNCNVKIHEEFINKD
FT                   NISELVAKDTDYVVDAIDTASSKILSIVWCDKNNINIISSMGTANKLHPTKLRIADIYD
FT                   TKVCPLAKIMRYELRKRNIKSLKVLYSEETPIKNNNRPLNDKGRPTPASIAFVPPCAGL
FT                   IIAGEVVRDIIK"
FT   misc_feature    45257..45664
FT                   /note="Pfam match to entry PF00899 ThiF, ThiF family,score
FT                   150.1, E-value 4.2e-42"
FT                   /inference="protein motif:Pfam:PF00899"
FT   CDS_pept        45960..47093
FT                   /transl_table=11
FT                   /locus_tag="CBO0041"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0058 SWALL:Q8XPA7 (EMBL:AP003185) (388 aa) fasta
FT                   scores: E(): 1.7e-59, 40.9 38d in 374 aa, and to
FT                   Caulobacter crescentus transporter, putative cc1133
FT                   SWALL:Q9A961 (EMBL:AE005791) (411 aa) fasta scores: E():
FT                   4.9e-14, 23.01 38d in 352 aa"
FT                   /db_xref="GOA:A5HXT6"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="InterPro:IPR020846"
FT                   /db_xref="InterPro:IPR036259"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT6"
FT                   /protein_id="CAL81594.1"
FT                   /translation="MLLYIFLTMILVAVCDSTRGIFIPIFKNEFNINNTKIGLMITIST
FT                   LGYTVFTYLGGILCQKKGQKRVYSIGLLIISISFLLLNFTPNYIILIILMFLINGGQAF
FT                   LAISSNTIIPIIFISFQAIIMNLAHFNYGMGLALSQRISGMLLYRGITWRRIYLYLSII
FT                   TFIVYLLLFFINIPVINKSKDDNKLKSKEIFKDKLLYFYIFALGFYVFSEIATGNWFVN
FT                   LMENGYRYNKNQSSYYIFLFSALFALGRLLGGFLVEKFNYIKAVCTSLAVALMMYTIGI
FT                   TLGQKGLILISLSGIFFSIVYPTVVLTISKVYSTNSSYVTGIVVTLSSFVNMIISFLMG
FT                   YLNDLIGIYTSYYLIPISLFISLMFMFLIHKNIKKLA"
FT   misc_feature    order(45969..46037,46068..46136,46179..46247,46266..46334,
FT                   46425..46493,46551..46619,46662..46730,46743..46811,
FT                   46821..46889,46914..46982,46995..47063)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CBO0041 by TMHMM2.0 at aa 4-26, 37-59, 74-96,
FT                   103-125,156-178, 198-220, 235-257, 262-284, 288-310,
FT                   319-341 and 346-368"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        47122..48066
FT                   /transl_table=11
FT                   /locus_tag="CBO0042"
FT                   /product="putative ribosomal-protein-alanine
FT                   acetyltransferase"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   ribosomal-protein-alanine acetyltransferase cac0152
FT                   SWALL:Q97MP0 (EMBL:AE007527) (312 aa) fasta scores: E():
FT                   4.1e-60, 49.2 38d in 315 aa, and to Clostridium perfringens
FT                   probable ribosomal-protein cpe0059 SWALL:Q8XPA6
FT                   (EMBL:AP003185) (312 aa) fasta scores: E(): 1.9e-53, 45.77
FT                   38d in 308 aa, and to Escherichia coli,Escherichia coli
FT                   O157:H7, and Shigella flexneri ribosomal-protein-alanine
FT                   acetyltransferase RimJ or b1066 or z1703 or ecs1444 or
FT                   sf1072 or s1150 SWALL:RIMJ_ECOLI (SWALL:P09454) (194 aa)
FT                   fasta scores: E(): 3.4e-14, 39.39 id in 165 aa"
FT                   /db_xref="GOA:A5HXT7"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT7"
FT                   /protein_id="CAL81595.1"
FT                   /translation="MNNKFKVSIELAKGTVDEYIVKDITGISIGRIFILELSKKNKYGC
FT                   FRLNLYRDGENSNIYLNYILKDFLQYLFYKKEVCKINIIINENMNTNVFIEYGFYLEGI
FT                   INDSRLIDGIKTSEFLFGLDIDTFRKANLYKELSIEGKNISLKLLTPINAQELLDYYIR
FT                   NERHLKSYEPTRDKTFYTLKEQRDLLMDSYKQYLNGNSLEFGIYKDKKFIGKIKISNII
FT                   MGIFKNCIVGYSIDKDFQGNGYMKEALKLLIDYTFNEIDIHRIEASTLIDNIRSQKVLE
FT                   GCGFKKLGINEKYLYIDGKWQDHVTYYIVNNNI"
FT   rRNA            48480..49921
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            50176..53077
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            53199..53315
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            53322..53397
FT                   /gene="tRNA Lys (TTT)"
FT                   /note="Cove score 84.68"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        complement(53621..54217)
FT                   /transl_table=11
FT                   /locus_tag="CBO0042A"
FT                   /product="uracyl DNA glycosilase"
FT                   /note="Similar to Clostridium acetobutylicum uracyl DNA
FT                   glycosilase cac0219 SWALL:Q97MH9 (EMBL:AE007535) (199 aa)
FT                   fasta scores: E(): 5.7e-53, 67 38d in 197 aa, and to
FT                   Clostridium tetani DNA polymerase, bacteriophage-type
FT                   ctc00062 SWALL:Q899V2 (EMBL:AE015936) (173 aa) fasta
FT                   scores: E(): 8.9e-41, 64.88 38d in 168 aa"
FT                   /db_xref="InterPro:IPR005122"
FT                   /db_xref="InterPro:IPR005273"
FT                   /db_xref="InterPro:IPR036895"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT8"
FT                   /protein_id="CAL81596.1"
FT                   /translation="MDIQESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPG
FT                   KNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRP
FT                   PKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLNRYV
FT                   FPMYHPSALTYNRSEEFHKIYENDWVKLREALGKI"
FT   rRNA            55108..56549
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   tRNA            56726..56801
FT                   /gene="tRNA Ala (TGC)"
FT                   /note="Cove score 93.93"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            56807..56883
FT                   /gene="tRNA Ile (GAT)"
FT                   /note="Cove score 99.73"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   rRNA            56957..59858
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            59991..60107
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            60114..60189
FT                   /gene="tRNA Lys (TTT)"
FT                   /note="Cove score 84.68"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        60532..61095
FT                   /transl_table=11
FT                   /locus_tag="CBO0043"
FT                   /product="putative RNA polymerase sigma factor"
FT                   /note="Similar to Clostridium tetani RNA polymerase sigma
FT                   factor ctc01788 SWALL:Q893M7 (EMBL:AE015942) (212 aa) fasta
FT                   scores: E(): 2.1e-44, 65.95 38d in 188 aa, and to
FT                   Clostridium acetobutylicum predicted sigma factor cac1766
FT                   SWALL:Q97I86 (EMBL:AE007685) (185 aa) fasta scores: E():
FT                   2.2e-20, 37.64 38d in 178 aa"
FT                   /db_xref="GOA:A5HXT9"
FT                   /db_xref="InterPro:IPR007627"
FT                   /db_xref="InterPro:IPR013249"
FT                   /db_xref="InterPro:IPR013324"
FT                   /db_xref="InterPro:IPR013325"
FT                   /db_xref="InterPro:IPR014284"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039425"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXT9"
FT                   /protein_id="CAL81597.1"
FT                   /translation="MKIDEDNFITQLKYKNSKALDFIVEEYSNIVFKIIRTVLNSNFHS
FT                   QYVEECANDVFWSVWSNIDSFDENKGNFKHWIAAISKYKAIDYKRKLFKQNNIESIDDH
FT                   ILCGDTSIEKDFILNENKEEIFEVMNYMKKEDREIFIRRYFLDEKVENIAKILGVNRNL
FT                   IDKRLSRGRKFLREKLILLKGEIL"
FT   misc_feature    60598..60816
FT                   /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70
FT                   region 2, score 26.4, E-value 6.8e-05"
FT                   /inference="protein motif:Pfam:PF04542"
FT   CDS_pept        61092..62534
FT                   /transl_table=11
FT                   /locus_tag="CBO0043A"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc01787 SWALL:Q893M8 (EMBL:AE015942) (477 aa) fasta
FT                   scores: E(): 5.7e-98, 58.62 38d in 481 aa, and to Bacillus
FT                   anthracis conserved domain protein ba1754 SWALL:Q81SB1
FT                   (EMBL:AE017029) (366 aa) fasta scores: E(): 9.9e-18, 27.1
FT                   id in 380 aa"
FT                   /db_xref="GOA:A5HXU0"
FT                   /db_xref="InterPro:IPR025436"
FT                   /db_xref="InterPro:IPR040680"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU0"
FT                   /protein_id="CAL81598.1"
FT                   /translation="MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKK
FT                   NLNNKIKRKNRSNNLKYTSIAAAITLVFSIGIVTTSPTFAKNIPVLNSIMQTLNNKYGN
FT                   RGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLK
FT                   IDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPENKKFNIDVNITEVSDIKGKWNFAFS
FT                   ASKEEISRESTVFKPNQKLDLPDSNGTIHKVVFSPIDTSIFITGYGKNKNIKAGPNGGM
FT                   FDYNYWIAFDDTGVELIPKGIGGGECDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPL
FT                   GGGGVKRDENGKEMPITIQTKKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTI
FT                   VKYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTI
FT                   FTNNFDNVEFREDLKFKIELNK"
FT   misc_feature    61275..61343
FT                   /note="1 probable transmembrane helix predicted for CBO0043
FT                   by TMHMM2.0 at aa 62-84"
FT                   /inference="protein motif:TMHMM:2.0"
FT   rRNA            63206..64647
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            64902..67803
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            67909..68025
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            68033..68108
FT                   /gene="tRNA Phe (GAA)"
FT                   /note="Cove score 85.71"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        68317..68508
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="dltB"
FT                   /locus_tag="CBO0044"
FT                   /product="putative transporter of activated D-alanine
FT                   (partial)"
FT                   /note="Similar to an internal region of Bacillus subtilis
FT                   protein DltB or Ipa-4r or bsu38510 SWALL:DLTB_BACSU
FT                   (SWALL:P39580) (395 aa) fasta scores: E(): 2.1, 36.58 38d
FT                   in 41 aa, and to Streptococcus pyogenes DltB-like protein
FT                   SWALL:Q9RIK3 (EMBL:U31918) (158 aa) fasta scores: E():
FT                   0.25, 42.5 38d in 40 aa"
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL81599.1"
FT   CDS_pept        68655..68936
FT                   /transl_table=11
FT                   /locus_tag="CBO0045"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="InterPro:IPR006998"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU2"
FT                   /protein_id="CAL81600.1"
FT                   /translation="MNISELQFYKFMFNKSIDKSYKVRASKRINLLLANSMDSIHIKSF
FT                   LHLYSKDNIFTEGLLTIMIPYYKFKHYLLSIKDKNMDENPKVKNFDWI"
FT   CDS_pept        68937..69329
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="dltD"
FT                   /locus_tag="CBO0046"
FT                   /product="putative transporter of activated D-alanine
FT                   (partial)"
FT                   /note="Similar to Bacillus subtilis protein dltd precursor
FT                   DltD or Ipa-2r or bsu38530 SWALL:DLTD_BACSU (SWALL:P39578)
FT                   (392 aa) fasta scores: E(): 4.3e-12, 40.67 38d in 118
FT                   aa,and to Bacillus anthracis dltd protein DltD-2 or ba2846
FT                   SWALL:Q81PG1 (EMBL:AE017033) (393 aa) fasta scores: E():
FT                   3e-13, 43.33 38d in 120 aa"
FT                   /note="was marked partial"
FT   rRNA            70265..71706
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            71960..74861
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            74914..75030
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            75038..75113
FT                   /gene="tRNA Phe (GAA)"
FT                   /note="Cove score 85.71"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        75254..75997
FT                   /transl_table=11
FT                   /locus_tag="CBO0047"
FT                   /product="putative peptidyl-prolyl cis-trans isomerase"
FT                   /db_xref="GOA:A5HXU3"
FT                   /db_xref="InterPro:IPR000297"
FT                   /db_xref="InterPro:IPR023058"
FT                   /db_xref="InterPro:IPR027304"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU3"
FT                   /protein_id="CAL81602.1"
FT                   /translation="MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIK
FT                   QMIDFELSYNYAKDMKFDETEDFKKQLEATKKQLLIQVAVSNALARATVSEEESKKYYE
FT                   ENKEEFRTQELITARHILVDSEEEANNIYEEIKNGLDFSEAAEKYSKCPSKAQGGSLGT
FT                   FTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNIKESMIKPFDEVKAMIDNKL
FT                   LQEKQNQQYNEFTQNLRDKYTVEIK"
FT   misc_feature    75590..75859
FT                   /note="Pfam match to entry PF00639 Rotamase, PPIC-type
FT                   PPIASE domain, score 111.1, E-value 2.3e-30"
FT                   /inference="protein motif:Pfam:PF00639"
FT   misc_feature    75677..75739
FT                   /note="PS01096 PpiC-type peptidyl-prolyl cis-trans
FT                   isomerase signature."
FT                   /inference="protein motif:ProSite:PS01096"
FT   rRNA            76546..77987
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   rRNA            78242..81143
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            81249..81365
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   CDS_pept        81736..82479
FT                   /transl_table=11
FT                   /locus_tag="CBO0048"
FT                   /product="putative regulatory protein"
FT                   /note="Similar to Clostridium tetani regulatory
FT                   protein,Sir2 family ctc00216 SWALL:Q899G3 (EMBL:AE015936)
FT                   (247 aa) fasta scores: E(): 3.6e-61, 65.84 38d in 243 aa,
FT                   and to Clostridium perfringens probable transcriptional
FT                   regulator cpe0256 SWALL:Q8XNS6 (EMBL:AP003186) (244 aa)
FT                   fasta scores: E(): 5.7e-55, 63.52 38d in 244 aa"
FT                   /db_xref="GOA:A5HXU4"
FT                   /db_xref="InterPro:IPR003000"
FT                   /db_xref="InterPro:IPR026590"
FT                   /db_xref="InterPro:IPR026591"
FT                   /db_xref="InterPro:IPR028628"
FT                   /db_xref="InterPro:IPR029035"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU4"
FT                   /protein_id="CAL81603.1"
FT                   /translation="MRLEKLKHIIDNSENIVFLGGAGVSTESNIPDFRSNNGLYKSKNN
FT                   LNYSPETILSHSFFKNNAKEFFQFYKDKMIFKDAKPNLAHYALTELEQIGKLKTIITQN
FT                   IDGLHQLSGAKNVLELHGSVHRNYCVNCGEKYNLDYILNTENSSEDIPYCKKCGSIVRP
FT                   DVVLYEEGLDMDTISKAIYYIQNADVLIVGGTSLVVYPAAGLVNYYKGKKLVLINKAET
FT                   PYDKKADLVIHDSIGSVLEKVIKKN"
FT   misc_feature    81796..82338
FT                   /note="Pfam match to entry PF02146 SIR2, Sir2 family,score
FT                   231.9, E-value 9.9e-67"
FT                   /inference="protein motif:Pfam:PF02146"
FT   tRNA            82561..82634
FT                   /gene="tRNA Cys (GCA)"
FT                   /note="Cove score 75.27"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        complement(82665..83573)
FT                   /transl_table=11
FT                   /locus_tag="CBO0049"
FT                   /product="putative muramoyl-tetrapeptide carboxypeptidase"
FT                   /note="Similar to Clostridium acetobutylicum MccF-like
FT                   protein cac0293 SWALL:Q97MA5 (EMBL:AE007544) (306 aa) fasta
FT                   scores: E(): 1.5e-62, 56.18 38d in 299 aa, and to
FT                   Clostridium perfringens hypothetical protein Cpe2458
FT                   SWALL:Q8XHM5 (EMBL:AP003194) (302 aa) fasta scores: E():
FT                   3.3e-38, 47.81 38d in 297 aa"
FT                   /db_xref="GOA:A5HXU5"
FT                   /db_xref="InterPro:IPR003507"
FT                   /db_xref="InterPro:IPR027461"
FT                   /db_xref="InterPro:IPR027478"
FT                   /db_xref="InterPro:IPR029062"
FT                   /db_xref="InterPro:IPR040449"
FT                   /db_xref="InterPro:IPR040921"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU5"
FT                   /protein_id="CAL81604.1"
FT                   /translation="MLLKHLNKGDTIGIVSPASPIEKDVVLKNIQVFKNLGFNIKLSNH
FT                   VYDKYGYLSGKDIDRANDLMDMFIDPSVYMILCSRGGYGSMRMLPYLDFNIIKNNPKIF
FT                   GGFSDITVLLNYITSKCGFTTFHCPMLSSNFNNIYTLKNFLEPLMNDFTSFEISNPNFV
FT                   PLLSQTNDIVEGNLVGGNLSLICNTLGTPYEIDTMDNILFLEEISEPPYKIDRMLTQLI
FT                   LSGKIKSCSGLILGQFTNCNINDCENDFSLDEVILDRLLSSNKPIISNLMSGHCDPNVT
FT                   LPIGSKIRLDCKNKLIKILNY"
FT   misc_feature    complement(83139..83342)
FT                   /note="Pfam match to entry PF02016
FT                   Peptidase_U61,LD-carboxypeptidase, score 110.0, E-value
FT                   4.9e-30"
FT                   /inference="protein motif:Pfam:PF02016"
FT   CDS_pept        complement(83609..84550)
FT                   /transl_table=11
FT                   /locus_tag="CBO0050"
FT                   /product="probable transporter"
FT                   /note="Similar to Clostridium perfringens probable
FT                   transport protein cpe2457 SWALL:Q8XHM6 (EMBL:AP003194) (314
FT                   aa) fasta scores: E(): 1.1e-77, 69.1 38d in 314 aa,and to
FT                   Clostridium acetobutylicum magnesium and cobalt transporter
FT                   cac0294 SWALL:Q97MA4 (EMBL:AE007544) (315 aa) fasta scores:
FT                   E(): 1.1e-77, 66.03 38d in 315 aa"
FT                   /db_xref="GOA:A5HXU6"
FT                   /db_xref="InterPro:IPR002523"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU6"
FT                   /protein_id="CAL81605.1"
FT                   /translation="MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGV
FT                   SLDFLKASLDEEETSRIDIEDNNMIVILDIPFTEMEDNSLTYDTYPLAIINTPNNIITV
FT                   CLKNSKILTDFFNNKVKSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKKLHK
FT                   SMKNRELILLLSLEKSLVYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQ
FT                   AIEMANIYSNILSGTMDAFASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIP
FT                   FSKSSQGFGLACGVTVILCIVCIIILKKKDLF"
FT   misc_feature    complement(83612..84484)
FT                   /note="Pfam match to entry PF01544 CorA, CorA-like Mg2+
FT                   transporter protein, score 20.8, E-value 6.2e-09"
FT                   /inference="protein motif:Pfam:PF01544"
FT   misc_feature    complement(order(83630..83689,83732..83800))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0050 by TMHMM2.0 at aa 251-273 and 288-307"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        84915..85418
FT                   /transl_table=11
FT                   /locus_tag="CBO0051"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00217 SWALL:Q899G2 (EMBL:AE015936) (166 aa) fasta
FT                   scores: E(): 3.1e-22, 42.51 38d in 167 aa, and to
FT                   Clostridium perfringens hypothetical protein Cpe2456
FT                   SWALL:Q8XHM7 (EMBL:AP003194) (165 aa) fasta scores: E():
FT                   4.5e-18, 38.12 38d in 160 aa"
FT                   /db_xref="GOA:A5HXU7"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU7"
FT                   /protein_id="CAL81606.1"
FT                   /translation="MGNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLD
FT                   EILNIFLLSIVILVSFLEVFKFKIKYSYFIIADQFIIHKIKGNYDKVVENIKLKDIIYF
FT                   DKCAGLRSKIDISKSKKYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYLSNK
FT                   RLAS"
FT   misc_feature    order(84951..85010,85053..85109)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0051 by TMHMM2.0 at aa 13-32 and 47-65"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(85423..86583)
FT                   /transl_table=11
FT                   /locus_tag="CBO0052"
FT                   /product="putative amidohydrolase"
FT                   /note="Similar to Staphylococcus aureus HmrA or mw2057
FT                   SWALL:Q8NVF8 (EMBL:AP004829) (394 aa) fasta scores: E():
FT                   4.7e-30, 28.68 38d in 387 aa, and to Clostridium tetani
FT                   amidohydrolase ctc00218 SWALL:Q899G1 (EMBL:AE015936) (392
FT                   aa) fasta scores: E(): 1.3e-71, 50.39 38d in 383 aa, and to
FT                   Escherichia coli aminobenzoyl-glutamate utilization protein
FT                   b abgb or b1337 SWALL:ABGB_ECOLI (SWALL:P76052) (481 aa)
FT                   fasta scores: E(): 0.0002, 25.46 38d in 326 aa"
FT                   /db_xref="GOA:A5HXU8"
FT                   /db_xref="InterPro:IPR017144"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU8"
FT                   /protein_id="CAL81607.1"
FT                   /translation="MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILK
FT                   KNNFNVQENYYNIPTSFYAEFGKGYPKICFFCEYDAPSEIGHVSGHNLVSSISLGAALS
FT                   LSKVIDNFSGTIIVMGTPGESLSGSKVTLAKQGAFKDIDVGLMIHPDEVTCQSGSSMAI
FT                   LPLKIKFRGKETLSYENTNVFSSLNGLLYTFNSINLLKQSINKNFHIDKLVINSGKDPY
FT                   ISSNTTEAKFYIRSKSISTAIYVENRIRKIVDNVNSLLNLDSEICFFELPYRELITNKR
FT                   LSRLFCHNLKEAGIIDICNEKNTVSGLSLGTVSHYIPCIHPYISILDKNSSINYFTKEF
FT                   ADETLTKHAQQNALKASQALSLTALDLIQNDMLLKEVKKEFFNKIE"
FT   CDS_pept        86837..87049
FT                   /transl_table=11
FT                   /locus_tag="CBO0052A"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR019700"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXU9"
FT                   /protein_id="CAL81608.1"
FT                   /translation="MKKQYCIICGKPLNSGIIINRKGICDVCEERMVNSDMSTDFYEFY
FT                   KKCIRKNLVQTFIKDEEMRWENYRF"
FT   CDS_pept        87028..88476
FT                   /transl_table=11
FT                   /locus_tag="CBO0053"
FT                   /product="lysine decarboxylase"
FT                   /EC_number="4.1.1.18"
FT                   /note="Similar to Bacillus subtilis lysine decarboxylase
FT                   Cad or bsu14630 SWALL:DCLY_BACSU (SWALL:P21885) (490 aa)
FT                   fasta scores: E(): 1.9e-43, 31.13 38d in 485 aa, and to
FT                   Clostridium acetobutylicum lysine decarboxylase cac0297
FT                   SWALL:Q97MA1 (EMBL:AE007544) (481 aa) fasta scores: E():
FT                   7.2e-94, 53.95 38d in 480 aa"
FT                   /db_xref="GOA:A5HXV0"
FT                   /db_xref="InterPro:IPR000310"
FT                   /db_xref="InterPro:IPR008286"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV0"
FT                   /protein_id="CAL81609.1"
FT                   /translation="MGELPILNGVLKYIKEKNILFSMPGHKGSLGFLFTKEGKKFCENM
FT                   PQCDLTEVEGLDNLHNSEGIIKESGYLLSRFYNSKKSYFLVNGSTSGNLAMIFSCFKEE
FT                   DKIIVERNCHRSIFNGIIMRKLKPIYIKNKVYRQFNAPLSIDLEHFLSLIKENKDAKGI
FT                   VITYPNYYGVCPNLKVIIKEAKKYDMKVLIDSAHGAHFGVCEKLPKSALELGADMVVMS
FT                   AHKTLPSLTQTAFLHIGKDSIIDINKVDFYISAFSSTSPSYLFLCSMDYSRFYLEKYGQ
FT                   EHYNELINRANYYRKKINLLDSFYVLNHSDIKHLNLKYKDVMDIDLTRYTINIKNGLNA
FT                   NCLSKYLRECGIQCEMSDGNNIILILSPFYNEDVMDRLYESLYEWDKNYNKDKYNYNIN
FT                   YNYIETNMNMYPYEVLEKEYLWIDYKDSLGKISYNNIVPYPPGVPIIMAGEIINKEIID
FT                   AICYYKNNGIDALGLKDNKIQIVK"
FT   misc_feature    87040..88200
FT                   /note="Pfam match to entry PF01276 OKR_DC_1, Orn/Lys/Arg
FT                   decarboxylase, major domain, score 228.0, E-value 1.4e-65"
FT                   /inference="protein motif:Pfam:PF01276"
FT   misc_feature    88006..88071
FT                   /note="Predicted helix-turn-helix motif with score 984.000,
FT                   SD 2.54 at aa 327-348, sequence LTRYTINIKNGLNANCLSKYLR"
FT   misc_feature    88123..88470
FT                   /note="Pfam match to entry PF03711 OKR_DC_1_C, Orn/Lys/Arg
FT                   decarboxylase, C-terminal domain, score -4.1, E-value
FT                   0.00071"
FT                   /inference="protein motif:Pfam:PF03711"
FT   CDS_pept        88500..89195
FT                   /transl_table=11
FT                   /locus_tag="CBO0054"
FT                   /product="thymidylate kinase"
FT                   /EC_number="2.7.4.9"
FT                   /note="Similar to Clostridium tetani thymidylate kinase
FT                   ctc00220 SWALL:Q899F9 (EMBL:AE015936) (228 aa) fasta
FT                   scores: E(): 5.8e-52, 62.16 38d in 222 aa, and to
FT                   Fusobacterium nucleatum subsp. vincentii ATCC 49256
FT                   thymidylate kinase fnv0225 SWALL:EAA23262
FT                   (EMBL:AABF01000172) (228 aa) fasta scores: E():
FT                   9.6e-42,51.54 38d in 227 aa"
FT                   /db_xref="GOA:A5HXV1"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR039430"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV1"
FT                   /protein_id="CAL81610.1"
FT                   /translation="MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKS
FT                   ESSALIKMYLSGEFGRNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTT
FT                   SNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNK
FT                   FTGEKEKDIHENNYEYLLESYNNSKYISEKYDWNRIECTNKDKIKSIDQINDDIIKIIT
FT                   QYIDFSEQR"
FT   misc_feature    88524..89117
FT                   /note="Pfam match to entry PF02223
FT                   Thymidylate_kin,Thymidylate kinase, score 11.7, E-value
FT                   1.6e-05"
FT                   /inference="protein motif:Pfam:PF02223"
FT   misc_feature    88719..88748
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00339"
FT   CDS_pept        89276..89605
FT                   /transl_table=11
FT                   /locus_tag="CBO0055"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum protein from
FT                   nitrogen regulatory protein P-II cac0299 SWALL:Q97M99
FT                   (EMBL:AE007544) (109 aa) fasta scores: E(): 4.1e-29,76.14
FT                   38d in 109 aa, and to Clostridium perfringens hypothetical
FT                   protein Cpe2450 SWALL:Q8XHN3 (EMBL:AP003194) (109 aa) fasta
FT                   scores: E(): 7.9e-23, 60.55 38d in 109 aa"
FT                   /db_xref="InterPro:IPR010375"
FT                   /db_xref="InterPro:IPR011322"
FT                   /db_xref="InterPro:IPR015867"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV2"
FT                   /protein_id="CAL81611.1"
FT                   /translation="MKLVIAIVQDDDASDLIDEITEEGFRVTKLATTGGFLKAGNTTLM
FT                   IGVEEKDVDRLIKKVEDICKTRKQIVTAPSPINGSTGMYVSYPIEVEVGGATIFVVDVD
FT                   KFARV"
FT   misc_feature    89276..89602
FT                   /note="Pfam match to entry PF06153 DUF970, Protein of
FT                   unknown function (DUF970), score 237.2, E-value 2.5e-68"
FT                   /inference="protein motif:Pfam:PF06153"
FT   CDS_pept        89623..90567
FT                   /transl_table=11
FT                   /locus_tag="CBO0056"
FT                   /product="DNA polymerase III, delta' subunit"
FT                   /EC_number="2.7.7.7"
FT                   /note="Similar to Escherichia coli DNA polymerase
FT                   III,delta' subunit HolB or b1099 SWALL:HOLB_ECOLI
FT                   (SWALL:P28631) (334 aa) fasta scores: E(): 1.3e-05, 22.05
FT                   id in 263 aa, and to Clostridium tetani DNA polymerase III
FT                   delta subunit ctc00221 SWALL:Q899F8 (EMBL:AE015936) (322
FT                   aa) fasta scores: E(): 1.1e-52, 53.35 38d in 313 aa"
FT                   /db_xref="GOA:A5HXV3"
FT                   /db_xref="InterPro:IPR015199"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV3"
FT                   /protein_id="CAL81612.1"
FT                   /translation="MDSHTIIGHENIKNRIKNSIIKGKFPHASIIVGEDGIGKSIIAKE
FT                   MAMIILEKSQQRSYADLIEFKPINKKSIGIDDIRNLIEEINKKPIEGNKKVIIIYKSEL
FT                   ITEVAQNAFLKTIEEPPKGVYIILLCENMEQMLDTIKSRCEIFKLNRLKPCDIENFIKY
FT                   KYKDIKKENINSAIAFSDGIPGKAERFIEDESLKYIRDMSLGILKDSKDLSNYNYLIKY
FT                   ENFLINYKENWEEILTCILSYLRDSLLFKETGDEELLLNVDKKEYIKHISEKYSYINLD
FT                   KMVSIINDTRDKLSKNINSTLVFDAMLIKMQEV"
FT   misc_feature    89719..89742
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        90569..91483
FT                   /transl_table=11
FT                   /locus_tag="CBO0057"
FT                   /product="putative signal peptidase II"
FT                   /note="Similar to Treponema pallidum Tpl protein or tp0046
FT                   SWALL:TPL_TREPA (SWALL:P45685) (233 aa) fasta scores: E():
FT                   5.7e-21, 37.68 38d in 207 aa, and to Clostridium tetani Tpl
FT                   protein ctc00222 SWALL:Q899F7 (EMBL:AE015936) (302 aa)
FT                   fasta scores: E(): 6.2e-79, 72.36 38d in 304 aa"
FT                   /db_xref="GOA:A5HXV4"
FT                   /db_xref="InterPro:IPR007557"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV4"
FT                   /protein_id="CAL81613.1"
FT                   /translation="MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAV
FT                   IAKKQINESEIVAPLKNVIRKATEEDIKKHHENKEKEKYALETCLQKIQEHKLNMKLID
FT                   VEYTFDNNKVIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGPCGR
FT                   PMCCSIFLGDFAPVSIKMAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKI
FT                   GSIVKTPYGQGEVVDNNVVKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVD
FT                   EEEINIEIDDADETIIKELLKDE"
FT   misc_feature    90743..91006
FT                   /note="Pfam match to entry PF04468 PSP1, PSP1 C-terminal
FT                   conserved region, score 187.2, E-value 2.8e-53"
FT                   /inference="protein motif:Pfam:PF04468"
FT   CDS_pept        91495..91698
FT                   /transl_table=11
FT                   /locus_tag="CBO0058"
FT                   /product="putative metal-binding protein"
FT                   /note="Similar to Pseudomonas sp periplasmic mercuric ion
FT                   binding protein MerP SWALL:Q936U4 (EMBL:Y18360) (92 aa)
FT                   fasta scores: E(): 0.64, 36.95 38d in 46 aa, and to
FT                   Clostridium acetobutylicum predicted metal-binding protein
FT                   of ferredoxin fold cac0302 SWALL:Q97M96 (EMBL:AE007544) (67
FT                   aa) fasta scores: E(): 7.5e-09, 43.28 38d in 67 aa"
FT                   /db_xref="GOA:A5HXV5"
FT                   /db_xref="InterPro:IPR006121"
FT                   /db_xref="InterPro:IPR036163"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV5"
FT                   /protein_id="CAL81614.1"
FT                   /translation="MKALLKVWDMRTIQDINKVKSAVANNEGVVACEISKEKKEVSVIY
FT                   DDYFVDVDKIIESIENIGYTVI"
FT   misc_feature    91504..91695
FT                   /note="Pfam match to entry PF00403
FT                   HMA,Heavy-metal-associated domain, score 11.0, E-value
FT                   0.071"
FT                   /inference="protein motif:Pfam:PF00403"
FT   CDS_pept        91780..91950
FT                   /transl_table=11
FT                   /locus_tag="CBO0059"
FT                   /product="ferredoxin"
FT                   /note="Similar to Clostridium pasteurianum ferredoxin
FT                   SWALL:FER_CLOPA (SWALL:P00195) (55 aa) fasta scores: E():
FT                   1.6e-18, 90.9 38d in 55 aa"
FT                   /db_xref="GOA:A5HXV6"
FT                   /db_xref="InterPro:IPR000813"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV6"
FT                   /protein_id="CAL81615.1"
FT                   /translation="MAYKITDACVSCGACAAECPVNAISQGDSIFDIDADTCIDCGNCA
FT                   NVCPVGAPVQD"
FT   misc_feature    91783..91854
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 34.4, E-value 2.8e-07"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    91804..91839
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    91870..91941
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 33.1, E-value 6.9e-07"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    91891..91926
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   CDS_pept        92071..92811
FT                   /transl_table=11
FT                   /locus_tag="CBO0060"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum SAM-dependent
FT                   methyltransferase cac0306 SWALL:Q97M92 (EMBL:AE007545) (244
FT                   aa) fasta scores: E(): 1e-56, 61.47 38d in 244 aa,and to
FT                   Clostridium perfringens hypothetical protein Cpe0279
FT                   SWALL:Q8XNQ3 (EMBL:AP003186) (256 aa) fasta scores: E():
FT                   1e-52, 57.61 38d in 243 aa"
FT                   /db_xref="GOA:A5HXV7"
FT                   /db_xref="InterPro:IPR007848"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV7"
FT                   /protein_id="CAL81616.1"
FT                   /translation="MDRIIKEDETLDDLQLKGIHVIQKKQAFRFGIDAVLLANFPTIKN
FT                   GAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSIKYNNLQEKVKFIEGD
FT                   LKNLKLLKDIEKVDVVTVNPPYKTQGTGIININDKNAISRHEICCTLDDVVKAAKVLLK
FT                   DKGKLYMIHRPDRIVDIMNVMRKYYIEPKLIRTIHPAVDKAPSMILIEGQKNGGKFLKW
FT                   DRPLYIYDENNKYTNEVKRIYGIE"
FT   CDS_pept        92831..93685
FT                   /transl_table=11
FT                   /locus_tag="CBO0061"
FT                   /product="putative corrin/porphyrin methyltransferase"
FT                   /EC_number="2.1.1.-"
FT                   /note="Similar to Clostridium tetani corrin/porphyrin
FT                   methyltransferase ctc00226 SWALL:Q899F5 (EMBL:AE015936)
FT                   (281 aa) fasta scores: E(): 2.6e-62, 63.79 38d in 279
FT                   aa,and to Clostridium perfringens hypothetical protein
FT                   Cpe0280 SWALL:Q8XNQ2 (EMBL:AP003186) (280 aa) fasta scores:
FT                   E(): 9.9e-63, 64.02 38d in 278 aa"
FT                   /db_xref="GOA:A5HXV8"
FT                   /db_xref="InterPro:IPR000878"
FT                   /db_xref="InterPro:IPR008189"
FT                   /db_xref="InterPro:IPR014776"
FT                   /db_xref="InterPro:IPR014777"
FT                   /db_xref="InterPro:IPR018063"
FT                   /db_xref="InterPro:IPR035996"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV8"
FT                   /protein_id="CAL81617.1"
FT                   /translation="MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTL
FT                   KLLNHFNIKKTLISYHKFNEEDKSINIINNLKEGKKIALVSDAGMPGISDPGYVLIKKC
FT                   IEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIF
FT                   YESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVL
FT                   VLQGKSIEEIEKEKEMEWSSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYS
FT                   IDI"
FT   misc_feature    92852..93454
FT                   /note="Pfam match to entry PF00590
FT                   TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases,
FT                   score 149.7,E-value 5.3e-42"
FT                   /inference="protein motif:Pfam:PF00590"
FT   misc_feature    93086..93121
FT                   /note="PS01296 Uncharacterized protein family UPF0011
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01296"
FT   CDS_pept        93841..94944
FT                   /transl_table=11
FT                   /locus_tag="CBO0062"
FT                   /product="putative exported peptidoglycan lytic protein"
FT                   /note="Similar to Listeria monocytogenes p45 precursor spl
FT                   or lmo2505 SWALL:Q9RE04 (EMBL:AJ250194) (401 aa) fasta
FT                   scores: E(): 2.4e-15, 31.18 38d in 388 aa, and to
FT                   Clostridium acetobutylicum cell wall-associated hydrolase
FT                   cac0308 SWALL:Q97M90 (EMBL:AE007545) (392 aa) fasta scores:
FT                   E(): 2.2e-27, 36.84 38d in 380 aa"
FT                   /db_xref="InterPro:IPR000064"
FT                   /db_xref="InterPro:IPR038765"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXV9"
FT                   /protein_id="CAL81618.1"
FT                   /translation="MNKKVLSAVIALALAVSINAKVMAAPSSGQAHDKTLELEEKIQNM
FT                   DNSIQNLMYKIEDNNKDIEKNKEDISKLGKDIEKAQKQIESREDLFNKRVRAMYISGFD
FT                   SYADIILESKGLSDLITRVDTVKKVMGFDQGVIKELKTKKEEIKEKKVALDKKSTEIVQ
FT                   LKAENEKKLSSMKSEKTKQEVVLKDLRDQEIKAAAEAAQKKAAERQVAQSQASVSQSRG
FT                   GNSVSVEAPASSGSSSSSSSSNSSNKPSNPAPPATHGDVVGYAMQFKGVPYVWGGTSPS
FT                   GFDCSGFVQYVYRNAAGIELPRDTYGQIGAGTRVSQDQLQPGDLVFPHTGHVGIYIGGG
FT                   QMIHAPQTGDVVKISSVWKFYAGVRVR"
FT   sig_peptide     93841..93910
FT                   /locus_tag="CBO0062"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.730 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    94648..94938
FT                   /note="Pfam match to entry PF00877 NLPC_P60, NlpC/P60
FT                   family, score 171.2, E-value 1.8e-48"
FT                   /inference="protein motif:Pfam:PF00877"
FT   CDS_pept        complement(95044..95289)
FT                   /transl_table=11
FT                   /gene="abrB"
FT                   /gene_synonym="cpsX"
FT                   /locus_tag="CBO0063"
FT                   /product="transition state regulatory protein"
FT                   /note="Similar to Bacillus subtilis transition state
FT                   regulatory protein AbrB or CpsX or bsu00370
FT                   SWALL:ABRB_BACSU (SWALL:P08874) (96 aa) fasta scores: E():
FT                   1.4e-12, 74.19 38d in 62 aa, and to Clostridium
FT                   acetobutylicum transition state regulatory protein AbrB
FT                   cac3647 SWALL:Q97D34 (EMBL:AE007860) (81 aa) fasta scores:
FT                   E(): 1.2e-26, 90.12 38d in 81 aa"
FT                   /db_xref="GOA:A5HXW0"
FT                   /db_xref="InterPro:IPR007159"
FT                   /db_xref="InterPro:IPR037914"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW0"
FT                   /protein_id="CAL81619.1"
FT                   /translation="MKSTGVVRRVDELGRIVIPIELRRTLDIAEKDALEIYVDGEQIIL
FT                   KKYEPACIFCGDARDVINYKGKNICKNCLNEIKDNK"
FT   misc_feature    complement(95104..95271)
FT                   /note="Pfam match to entry PF04014 SpoVT_AbrB, SpoVT / AbrB
FT                   like domain, score 58.0, E-value 2.2e-14"
FT                   /inference="protein motif:Pfam:PF04014"
FT   CDS_pept        96096..96707
FT                   /transl_table=11
FT                   /locus_tag="CBO0064"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0282 SWALL:Q8XNQ0 (EMBL:AP003186) (199 aa) fasta
FT                   scores: E(): 9.2e-42, 63.59 38d in 195 aa, and to
FT                   Clostridium acetobutylicum uncharacterized protein homolog
FT                   ykrk b. subtilis cac0314 SWALL:Q97M84 (EMBL:AE007546) (197
FT                   aa) fasta scores: E(): 6.5e-41, 59.89 38d in 187 aa"
FT                   /db_xref="InterPro:IPR014975"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW1"
FT                   /protein_id="CAL81620.1"
FT                   /translation="MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLN
FT                   DKFEEEDYTNNIVQNYIKNEVISKPQDGKKRGYTKLHLVQLVLLSYMRPLLTTEEIKNV
FT                   FTLAFNEINDRGDDIISWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLELNSD
FT                   EENRITIFLIVMTLICQASAIKKLVKKIVNDYTDKLDYNE"
FT   CDS_pept        97129..98340
FT                   /transl_table=11
FT                   /gene="arcA1"
FT                   /locus_tag="CBO0065"
FT                   /product="arginine deiminase"
FT                   /EC_number="3.5.3.6"
FT                   /note="Similar to Enterococcus faecalis arginine deiminase
FT                   ArcA or ef0104 SWALL:Q93K67 (EMBL:AJ312276) (408 aa) fasta
FT                   scores: E(): 1.6e-80, 55.06 38d in 405 aa, and to Bacillus
FT                   licheniformis arginine deiminase ArcA SWALL:ARCA_BACLI
FT                   (SWALL:O86131) (413 aa) fasta scores: E(): 3.7e-77, 51.22
FT                   id in 408 aa"
FT                   /note="Also similar to CBO1587 (57.03 38d)."
FT                   /db_xref="GOA:A5HXW2"
FT                   /db_xref="InterPro:IPR003876"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW2"
FT                   /protein_id="CAL81621.1"
FT                   /translation="MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIP
FT                   YLKVAQEEHDIFADTLRSNGVEVLYLEDLAAEAIQNKEIREKFIEEAIKESGTTDKTYL
FT                   EKIKKYLESMKEKELVCKIMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFASIGK
FT                   GITINAMRTKTRRRETMFAKYIFKYHPEFKDSDIPLWYDRTGEHCIEGGDELVLSDEVL
FT                   AIGHSERTDSESVLKVAKNIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVH
FT                   GEIEGTLKVNAITYDEKTKELVIKEEIDSLEGILSKYLKRDIKVIRCGGGDKIISAREQ
FT                   WNDGSNTLAISPGKVITYERNYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFR
FT                   KDLK"
FT   misc_feature    97159..98325
FT                   /note="Pfam match to entry PF02274
FT                   Amidinotransf,Amidinotransferase, score 570.6, E-value
FT                   1.1e-168"
FT                   /inference="protein motif:Pfam:PF02274"
FT   CDS_pept        complement(98426..98893)
FT                   /transl_table=11
FT                   /gene="ispF"
FT                   /locus_tag="CBO0066"
FT                   /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
FT                   synthase"
FT                   /EC_number="4.6.1.12"
FT                   /note="Similar to Bacillus subtilis 2-C-methyl-D-erythritol
FT                   2,4-cyclodiphosphate synthase IspF or bsu00910
FT                   SWALL:ISPF_BACSU (SWALL:Q06756) (158 aa) fasta scores: E():
FT                   1.3e-32, 60.13 38d in 153 aa, and to Clostridium
FT                   perfringens 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
FT                   synthase IspF or cpe2316 SWALL:ISPF_CLOPE (SWALL:Q8XI08)
FT                   (156 aa) fasta scores: E(): 2.9e-38, 69.48 38d in 154 aa"
FT                   /db_xref="GOA:A5HXW3"
FT                   /db_xref="InterPro:IPR003526"
FT                   /db_xref="InterPro:IPR020555"
FT                   /db_xref="InterPro:IPR036571"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXW3"
FT                   /protein_id="CAL81622.1"
FT                   /translation="MRIGLGYDVHKLVENRPLIIGGVTIPHDKGLLGHSDADVLVHAIM
FT                   DALLGAAALGDIGKHFPDSDKNFKNISSLLLLSKVKDLINKEGYKIVNIDCTIIAQKPK
FT                   MLYHIDAMKKNICKCLKLDNNMLNIKATTEEGLGFTGKEEGISANAICLLD"
FT   misc_feature    complement(98429..98440)
FT                   /note="PS00294 Prenyl group binding site (CAAX box)."
FT                   /inference="protein motif:ProSite:PS00294"
FT   misc_feature    complement(98429..98893)
FT                   /note="Pfam match to entry PF02542 YgbB, YgbB family,score
FT                   271.4, E-value 1.3e-78"
FT                   /inference="protein motif:Pfam:PF02542"
FT   CDS_pept        complement(98969..99301)
FT                   /transl_table=11
FT                   /locus_tag="CBO0067"
FT                   /product="putative membrane protein"
FT                   /note="No significant database matches"
FT                   /db_xref="GOA:A5HXW4"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW4"
FT                   /protein_id="CAL81623.1"
FT                   /translation="MCNLWTTYIILNIILLNKNIKFEIVSIFLTFVKSYVIIIIGIFVK
FT                   GRVYMGEKIIYVNFKKRVISNSYKRPFLLFLHNFLRKKLLFFYNKHLNKSIKLIYYKKN
FT                   DNKNIS"
FT   misc_feature    complement(99170..99238)
FT                   /note="1 probable transmembrane helix predicted for CBO0067
FT                   by TMHMM2.0 at aa 22-44"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        99629..100498
FT                   /transl_table=11
FT                   /locus_tag="CBO0068"
FT                   /product="probable polysaccharide deacetylase"
FT                   /note="Similar to Clostridium tetani putative
FT                   polysaccharide deacetylase ctc00229 SWALL:Q899F2
FT                   (EMBL:AE015936) (293 aa) fasta scores: E(): 4.7e-50,52.05
FT                   38d in 292 aa, and to Clostridium acetobutylicum predicted
FT                   xylanase/chitin deacetilase, similar to yxkh b.subtilis
FT                   cac0436 SWALL:Q97LW8 (EMBL:AE007558) (295 aa) fasta scores:
FT                   E(): 8.6e-38, 47.03 38d in 253 aa"
FT                   /db_xref="GOA:A5HXW5"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="InterPro:IPR011330"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW5"
FT                   /protein_id="CAL81624.1"
FT                   /translation="MKNKKSLIFFAFIMMIAVLFSGCKKNNNVDDNNISEKKAQSKKQE
FT                   RNIKNTDVRSFTKEPLIYNDKSVPVLMYHSIDYEKGNELRVPKEQFKEQMEYLKDNGYT
FT                   TLTLNELYNFLEKNKPIPEKSIVITLDDGYVDNYTNAYPILKELGFNATVFVVTSNIDK
FT                   DKRTLTSKQIKEMDEAGIQIASHTYNHDKLDDLSYEKQLQTMKKSKDDLEKILNHKVDF
FT                   IAYPYGKWNEESIKAAKDSGYKMAFTTQGGWSNKQDGIYTLNRVYISSLKGIDNFKDRI
FT                   TNPNYNKS"
FT   sig_peptide     99629..99713
FT                   /locus_tag="CBO0068"
FT                   /note="probabilty 0.997, with cleavage site probability
FT                   0.553 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    99665..99697
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    99983..100366
FT                   /note="Pfam match to entry PF01522
FT                   Polysacc_deacet,Polysaccharide deacetylase, score 148.1,
FT                   E-value 1.6e-41"
FT                   /inference="protein motif:Pfam:PF01522"
FT   CDS_pept        complement(100767..101009)
FT                   /transl_table=11
FT                   /locus_tag="CBO0069"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   metal-binding protein cac0438 SWALL:Q97LW6 (EMBL:AE007558)
FT                   (80 aa) fasta scores: E(): 1.4e-16, 53.75 38d in 80 aa. No
FT                   similarity to any other protein in the database."
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW6"
FT                   /protein_id="CAL81625.1"
FT                   /translation="MTLREIMKYIESEFSIINKTPCDICGGSYLTKDLSINLLDSIPYD
FT                   ICDCVCSNCGHKKVFKFYAPFIDESKKENYSKIIN"
FT   CDS_pept        101129..101704
FT                   /transl_table=11
FT                   /gene="spmA"
FT                   /locus_tag="CBO0070"
FT                   /product="spore maturation protein A"
FT                   /note="Similar to Bacillus subtilis spore maturation
FT                   protein A SpmA or bsu23180 SWALL:SPMA_BACSU (SWALL:P35157)
FT                   (196 aa) fasta scores: E(): 6.1e-26, 40.83 38d in 191
FT                   aa,and to Clostridium tetani spore maturation protein A
FT                   ctc00238 SWALL:Q899E4 (EMBL:AE015936) (197 aa) fasta
FT                   scores: E(): 3.7e-46, 61.78 38d in 191 aa"
FT                   /db_xref="GOA:A5HXW7"
FT                   /db_xref="InterPro:IPR011642"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW7"
FT                   /protein_id="CAL81626.1"
FT                   /translation="MVNIIWGIIFLVGVMFGVFSGNGEQLSKSIIESTNSTVKLVIGLV
FT                   GVMSLWCGIMKIAEESGLTDKIAKCIKPILKVIFKDSKNDNKALGAITMNLTANMMGLS
FT                   NAATPFGIKAMKELKRLNVKEEEASNDMALFLVLNAACIQLVPTTVISIRAAMGSKNPG
FT                   EIIIPAIIVTSTAAFCGVIFCKILQKYF"
FT   misc_feature    101129..101701
FT                   /note="Pfam match to entry PF04291 Spore_mat_A, Spore
FT                   maturation protein A, score 321.3, E-value 1.2e-93"
FT                   /inference="protein motif:Pfam:PF04291"
FT   misc_feature    order(101138..101197,101234..101302,101396..101464,
FT                   101525..101593,101621..101689)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0070 by TMHMM2.0 at aa 4-23, 36-58, 90-112, 133-155 and
FT                   165-187"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        101717..102235
FT                   /transl_table=11
FT                   /gene="spmB"
FT                   /locus_tag="CBO0071"
FT                   /product="spore maturation protein B"
FT                   /note="Similar to Bacillus subtilis spore maturation
FT                   protein B SpmB or bsu23170 SWALL:SPMB_BACSU (SWALL:P35158)
FT                   (179 aa) fasta scores: E(): 4.1e-25, 41.61 38d in 173
FT                   aa,and to Clostridium acetobutylicum spore maturation
FT                   protein B cac0470 SWALL:Q97LT4 (EMBL:AE007561) (173 aa)
FT                   fasta scores: E(): 2.7e-45, 69.59 38d in 171 aa"
FT                   /db_xref="GOA:A5HXW8"
FT                   /db_xref="InterPro:IPR011642"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW8"
FT                   /protein_id="CAL81627.1"
FT                   /translation="MNYIVKAIIPIIILLIIAYGMIKRVKVYECFVEGAKDGISICIKI
FT                   FPYLLAMMVAIAVFRESKALDCLINILRPVSNLIGLPGELVPLVLIKPLSGSGALGVFA
FT                   DILKQFGPDSNVGKMASIIMGSTETIFYTITVYFGAVGIKKIRHTLWAAIFADMVAIIM
FT                   AVLVTNIIL"
FT   misc_feature    order(101723..101782,101825..101893,101948..102016,
FT                   102074..102142,102161..102229)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0071 by TMHMM2.0 at aa 3-22, 37-59, 78-100, 120-142 and
FT                   149-171"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    101768..102232
FT                   /note="Pfam match to entry PF03751 Spore_mat_B, Spore
FT                   maturation protein B, score 208.8, E-value 8.8e-60"
FT                   /inference="protein motif:Pfam:PF03751"
FT   repeat_region   complement(102378..102433)
FT   repeat_region   102383..102422
FT   CDS_pept        complement(102480..103817)
FT                   /transl_table=11
FT                   /locus_tag="CBO0072"
FT                   /product="putative Na+ driven multidrug efflux pump"
FT                   /note="Similar to Vibrio parahaemolyticus multidrug
FT                   resistance protein NorM or vp1479 SWALL:NORM_VIBPA
FT                   (SWALL:O82855) (456 aa) fasta scores: E(): 8.1e-23, 26.57
FT                   id in 414 aa, and to Clostridium tetani Na+ driven
FT                   multidrug efflux pump ctc01799 SWALL:Q893L8 (EMBL:AE015942)
FT                   (455 aa) fasta scores: E(): 6.5e-93,52.71 38d in 442 aa"
FT                   /db_xref="GOA:A5HXW9"
FT                   /db_xref="InterPro:IPR002528"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXW9"
FT                   /protein_id="CAL81628.1"
FT                   /translation="MKINRENIKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAV
FT                   STVGLSSEIIYTFTNIFIAVGLSIGITSIVARSYGSDNLHLAEEYASIGLSIGILIAFF
FT                   ISIILFIFPKTILSLANAKEAVLINGTIYMKIISLGIFFSMLTSLMNSIVRGYGNTKTP
FT                   LFISILINIVNLTLDYGLIFGKLGFPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIK
FT                   PKIKYIKNINISRFKYLIRLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTV
FT                   ESISFMPGWGFAVAATTLTGHKIGEKNIEKARDYSHTCTFLGICIMGITGLIFLIFPSF
FT                   IIKLFITNSEKQVITLGSRCLMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSW
FT                   LLRLPLMFYFIYIVKSSVTYVWWITSIQWIFEAICLIILSRKKFNK"
FT   misc_feature    complement(order(102501..102569,102579..102647,
FT                   102666..102734,102792..102860,103170..103238,
FT                   103266..103334,103371..103439,103482..103550,
FT                   103587..103655,103725..103784))
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0072 by TMHMM2.0 at aa 12-31, 55-77, 90-112,
FT                   127-149,162-184, 194-216, 320-342, 362-384, 391-413 and
FT                   417-439"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(102594..103085)
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score 151.7,
FT                   E-value 1.3e-42"
FT                   /inference="protein motif:Pfam:PF01554"
FT   misc_feature    complement(103278..103769)
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score 119.7,
FT                   E-value 5.9e-33"
FT                   /inference="protein motif:Pfam:PF01554"
FT   CDS_pept        103961..104533
FT                   /transl_table=11
FT                   /locus_tag="CBO0073"
FT                   /product="putative uracil-DNA glycosylase"
FT                   /note="Similar to Clostridium tetani DNA
FT                   polymerase,bacteriophage-type ctc00242 SWALL:Q899E0
FT                   (EMBL:AE015936) (188 aa) fasta scores: E(): 1e-52, 63.97
FT                   38d in 186 aa,and to Thermoanaerobacter tengcongensis
FT                   uracil-DNA glycosylase tte0077 SWALL:Q8RDF7 (EMBL:AE012981)
FT                   (186 aa) fasta scores: E(): 4.2e-42, 56.21 38d in 185 aa"
FT                   /db_xref="InterPro:IPR005122"
FT                   /db_xref="InterPro:IPR005273"
FT                   /db_xref="InterPro:IPR036895"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX0"
FT                   /protein_id="CAL81629.1"
FT                   /translation="MLKWSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPG
FT                   ADEDRTGRPFVGKAGQLLTKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLP
FT                   YLRNQVALVKPKIMICLGATALKYIMGEQFRITRDRGKWIERKGYYIMATFHPAALFRD
FT                   ESKKKLLWQDLKSIREKYDELIKNNIV"
FT   misc_feature    104048..104497
FT                   /note="Pfam match to entry PF03167 UDG, Uracil DNA
FT                   glycosylase superfamily, score 92.8, E-value 7.1e-25"
FT                   /inference="protein motif:Pfam:PF03167"
FT   CDS_pept        104562..104996
FT                   /transl_table=11
FT                   /locus_tag="CBO0074"
FT                   /product="MarR-family transcriptional regulator"
FT                   /note="Similar to Bacillus subtilis organic hydroperoxide
FT                   resistance transcriptional regulator OhrR or bsu13150
FT                   SWALL:OHRR_BACSU (SWALL:O34777) (147 aa) fasta scores: E():
FT                   0.00012, 27.27 38d in 143 aa, and to Staphylococcus aureus
FT                   hypothetical protein sav2386 or sa2174 SWALL:Q99RP3
FT                   (EMBL:AP003365) (148 aa) fasta scores: E(): 1.4e-05,28.87
FT                   38d in 142 aa"
FT                   /db_xref="GOA:A5HXX1"
FT                   /db_xref="InterPro:IPR000835"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX1"
FT                   /protein_id="CAL81630.1"
FT                   /translation="MDNMELSKELIKFIITMKKQIKKYLNLNSTLKLTEQQFVTLFILK
FT                   KNKKITLKKLSTYICVSTSSLCIMLTRMMEEELVYREVDERDRRNTFYSLTEKGVNLID
FT                   KEIEGKVDNIEEKIMNLSLSQKEKLYEAIKNIEEIIDILE"
FT   misc_feature    104658..104969
FT                   /note="Pfam match to entry PF01047 MarR, MarR family,score
FT                   65.4, E-value 1.3e-16"
FT                   /inference="protein motif:Pfam:PF01047"
FT   misc_feature    104709..104774
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1182.000, SD 3.21 at aa 50-71, sequence
FT                   ITLKKLSTYICVSTSSLCIMLT"
FT   CDS_pept        105378..107315
FT                   /transl_table=11
FT                   /gene="metG"
FT                   /gene_synonym="metS"
FT                   /locus_tag="CBO0075"
FT                   /product="methionyl-tRNA synthetase"
FT                   /EC_number="6.1.1.10"
FT                   /note="Similar to Bacillus stearothermophilus
FT                   methionyl-tRNA synthetase MetG or MetS SWALL:SYM_BACST
FT                   (SWALL:P23920) (649 aa) fasta scores: E(): 3.3e-151,61.13
FT                   38d in 651 aa, and to Clostridium acetobutylicum
FT                   methionyl-tRNA synthetase MetG or cac2991 SWALL:SYM_CLOAB
FT                   (SWALL:Q97EW5) (644 aa) fasta scores: E(): 8.3e-193,76.67
FT                   38d in 643 aa"
FT                   /db_xref="GOA:A5HXX2"
FT                   /db_xref="InterPro:IPR001412"
FT                   /db_xref="InterPro:IPR002547"
FT                   /db_xref="InterPro:IPR004495"
FT                   /db_xref="InterPro:IPR009080"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="InterPro:IPR013155"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR014758"
FT                   /db_xref="InterPro:IPR015413"
FT                   /db_xref="InterPro:IPR023457"
FT                   /db_xref="InterPro:IPR033911"
FT                   /db_xref="InterPro:IPR041872"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX2"
FT                   /protein_id="CAL81631.1"
FT                   /translation="MSKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVM
FT                   FLTGTDEHGQKIQRLAEAKKVTPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVEL
FT                   VQKIFKTLYDKGDIYKSEYSGWYCTPCESFWTETQLEDGKCPDCGRSVEKAKEEAYFFK
FT                   MSKYAPKLIEYIESHPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKH
FT                   VIYVWIDALANYITALGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIP
FT                   LPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNE
FT                   IFIKKINSDLANDLGNLLSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEE
FT                   NMEKLRIPEALEEIWTFIGRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISV
FT                   CISAFIPETSIKINEQINADVLNWDSLSKFNGTKVGTKVKKGEAIFPRIDVEKKIEELN
FT                   KLKEEQLKQNKAKNIAPIKEEITIDDFEKIDLRVAKVLECEPIKGAKKLLKLKVSLGGE
FT                   ERQVVSGIAKYYKPEDLIGKKVVLVANLKPVKLRGELSQGMILAASTEDDSELFVASID
FT                   GDIEEGNIVR"
FT   misc_feature    105384..106388
FT                   /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA
FT                   synthetases class I (I, L, M and V), score -113.3, E-value
FT                   7.3e-10"
FT                   /inference="protein motif:Pfam:PF00133"
FT   misc_feature    105420..105449
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00178"
FT   misc_feature    107022..107306
FT                   /note="Pfam match to entry PF01588 tRNA_bind, Putative tRNA
FT                   binding domain, score 160.3, E-value 3.5e-45"
FT                   /inference="protein motif:Pfam:PF01588"
FT   CDS_pept        107480..108985
FT                   /transl_table=11
FT                   /locus_tag="CBO0076"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe2521 SWALL:Q8XHG4 (EMBL:AP003194) (499 aa) fasta
FT                   scores: E(): 1.5e-43, 34.32 38d in 507 aa, and to Listeria
FT                   monocytogenes hypothetical protein Lmo2224 SWALL:Q8Y552
FT                   (EMBL:AL591982) (377 aa) fasta scores: E(): 1.6e-08, 23.49
FT                   38d in 498 aa"
FT                   /db_xref="GOA:A5HXX3"
FT                   /db_xref="InterPro:IPR007383"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX3"
FT                   /protein_id="CAL81632.1"
FT                   /translation="MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGL
FT                   IPKEKTRIAKSVGNAIGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLED
FT                   KFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITN
FT                   NYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIK
FT                   VYVYRKKDNLSNYINEMLKEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVF
FT                   LEGYLQREETKEEMVSLVNKSIDKILDTDLQDIIENIPENNKDVILNETVDILCQKFQN
FT                   TEMILEMIEKIESHFQGKNSLNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISD
FT                   IIENFMKTPIYELTQGNEEGILNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRIN
FT                   EFDVYLAEEIILEISSKELKAITWLGGLLGALIGILSPILSKI"
FT   misc_feature    order(107486..107545,108914..108973)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0076 by TMHMM2.0 at aa 3-22 and 479-498"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    107501..108982
FT                   /note="Pfam match to entry PF04286 DUF445, Protein of
FT                   unknown function (DUF445), score 82.7, E-value 7.7e-22"
FT                   /inference="protein motif:Pfam:PF04286"
FT   CDS_pept        109136..109930
FT                   /transl_table=11
FT                   /locus_tag="CBO0077"
FT                   /product="putative TatD-family hydrolase"
FT                   /note="Similar to Clostridium acetobutylicum php
FT                   superfamily hydrolase, yabd ortholog cac2989 SWALL:Q97EW7
FT                   (EMBL:AE007795) (253 aa) fasta scores: E(): 1e-64, 68.65 id
FT                   in 252 aa, and to Clostridium perfringens hypothetical
FT                   protein Cpe2520 SWALL:Q8XHG5 (EMBL:AP003194) (256 aa) fasta
FT                   scores: E(): 1e-61, 63.92 38d in 255 aa"
FT                   /db_xref="GOA:A5HXX4"
FT                   /db_xref="InterPro:IPR001130"
FT                   /db_xref="InterPro:IPR015991"
FT                   /db_xref="InterPro:IPR018228"
FT                   /db_xref="InterPro:IPR032466"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX4"
FT                   /protein_id="CAL81633.1"
FT                   /translation="MKKYRIFDAHAHYDDEAFDEDRSEVIKELEDFGILGVLNCGSSLD
FT                   TSKTSVELSNKYNFFYAAVGVHPENAEEINEKTLNKIEALSENKKVKAIGEIGLDYYYE
FT                   ENPKRDIQIKAFKKQMELAEKLNLPVVIHDRDAHKDTLDIIKQFPNIKGEVHCFSGSVE
FT                   FAKQCVDLGYYIGVTGVVTFKNAKKIVEVIKSVPMDRILVETDCPYMAPTPLRGKRNRS
FT                   EYIKYMVDKIAEIKEISSEEVTSQILINIKDLFNIDVIKNKD"
FT   misc_feature    109145..109906
FT                   /note="Pfam match to entry PF01026 TatD_DNase, TatD related
FT                   DNase, score 389.4, E-value 3.7e-114"
FT                   /inference="protein motif:Pfam:PF01026"
FT   CDS_pept        109957..110100
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CBO0078"
FT                   /product="putative enterocin immunity protein (partial)"
FT                   /note="Similar to an internal region of Enterococcus
FT                   faecalis Enti1071 enti1071 SWALL:Q8GFE1 (EMBL:AF164559)
FT                   (125 aa) fasta scores: E(): 0.22, 40.42 38d in 47 aa"
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL81634.1"
FT   misc_feature    110008..110076
FT                   /note="1 probable transmembrane helix predicted for CBO0078
FT                   by TMHMM2.0 at aa 18-40"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        110158..111216
FT                   /transl_table=11
FT                   /locus_tag="CBO0079"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium tetani hypothetical membrane
FT                   associated protein ctc00245 SWALL:Q899D7 (EMBL:AE015936)
FT                   (368 aa) fasta scores: E(): 2.6e-61, 54.98 38d in 351 aa"
FT                   /db_xref="GOA:A5HXX6"
FT                   /db_xref="InterPro:IPR007137"
FT                   /db_xref="InterPro:IPR010611"
FT                   /db_xref="InterPro:IPR011098"
FT                   /db_xref="InterPro:IPR036908"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX6"
FT                   /protein_id="CAL81635.1"
FT                   /translation="MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSI
FT                   DGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVD
FT                   GKKLAIQSAENNIGDMLKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKSKKN
FT                   MDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSK
FT                   VVAMGTKVTTVNALSRGGSVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGT
FT                   TARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSN
FT                   WGSRWVNVYILD"
FT   sig_peptide     110158..110269
FT                   /locus_tag="CBO0079"
FT                   /note="probabilty 0.857, with cleavage site probability
FT                   0.329 between residues 37 and 38"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    110194..110262
FT                   /note="1 probable transmembrane helix predicted for CBO0079
FT                   by TMHMM2.0 at aa 12-34"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    110206..110253
FT                   /note="PS00038 Myc-type, 'helix-loop-helix' dimerization
FT                   domain signature."
FT                   /inference="protein motif:ProSite:PS00038"
FT   misc_feature    110236..110406
FT                   /note="Pfam match to entry PF03990 DUF348, Domain of
FT                   unknown function (DUF348), score 35.7, E-value 1.1e-07"
FT                   /inference="protein motif:Pfam:PF03990"
FT   misc_feature    110410..110577
FT                   /note="Pfam match to entry PF03990 DUF348, Domain of
FT                   unknown function (DUF348), score 46.3, E-value 7e-11"
FT                   /inference="protein motif:Pfam:PF03990"
FT   CDS_pept        111289..111834
FT                   /transl_table=11
FT                   /locus_tag="CBO0080"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum primase-like
FT                   protein, containing toprim domain, yabf b.subtilis ortholog
FT                   cac2987 SWALL:Q97EW9 (EMBL:AE007795) (185 aa) fasta scores:
FT                   E(): 7.2e-43, 71.34 38d in 178 aa"
FT                   /db_xref="GOA:A5HXX7"
FT                   /db_xref="InterPro:IPR004466"
FT                   /db_xref="InterPro:IPR006171"
FT                   /db_xref="InterPro:IPR025156"
FT                   /db_xref="InterPro:IPR034141"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HXX7"
FT                   /protein_id="CAL81636.1"
FT                   /translation="MIKEVIVVEGRDDITAVKRAVDAEMIAVGGFGINSKVIKKIREAQ
FT                   KRQGVIVLTDPDYAGEKIRKYICNRVKGVKHAYISQEEGTKEDDIGVENAAPEAIIRAL
FT                   NLAKCEVKQERKEFDMNDMIFFKLTANEESKERREKLGMALGIGYCNTNQFIKRLNNFG
FT                   ITKEEFIKAIKDLDKGNE"
FT   misc_feature    111295..111528
FT                   /note="Pfam match to entry PF01751 Toprim, Toprim
FT                   domain,score 43.2, E-value 6.2e-10"
FT                   /inference="protein motif:Pfam:PF01751"
FT   CDS_pept        111827..112663
FT                   /transl_table=11
FT                   /gene="ksgA"
FT                   /gene_synonym="rsmA"
FT                   /locus_tag="CBO0081"
FT                   /product="dimethyladenosine transferase"
FT                   /EC_number="2.1.1.-"
FT                   /note="Similar to Escherichia coli dimethyladenosine
FT                   transferase KsgA or RsmA or b0051 SWALL:KSGA_ECOLI
FT                   (SWALL:P06992) (273 aa) fasta scores: E(): 5.9e-25, 36.32
FT                   id in 256 aa, and to Clostridium acetobutylicum
FT                   dimethyladenosine transferase KsgA or cac2986
FT                   SWALL:KSGA_CLOAB (SWALL:Q97EX0) (276 aa) fasta scores: E():
FT                   6.7e-69, 67.63 38d in 275 aa"
FT                   /db_xref="GOA:A5HXX8"
FT                   /db_xref="InterPro:IPR001737"
FT                   /db_xref="InterPro:IPR011530"
FT                   /db_xref="InterPro:IPR020596"
FT                   /db_xref="InterPro:IPR020598"
FT                   /db_xref="InterPro:IPR023165"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX8"
FT                   /protein_id="CAL81637.1"
FT                   /translation="MNNMNTKEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKED
FT                   TVIEIGPGVGTLTKELLERAKEVYSIELDGDLIPILQEELKEYNNFTLIHKDALKIDFN
FT                   ELMENKDSIKLVANLPYYVTTPIISRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYG
FT                   SLTVLVQYYCNTKIIRKVSPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSS
FT                   FNMRRKTLWNSLKSLNIDKESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYDIL"
FT   misc_feature    111893..112642
FT                   /note="Pfam match to entry PF00398 RrnaAD, Ribosomal RNA
FT                   adenine dimethylase, score 281.6, E-value 1e-81"
FT                   /inference="protein motif:Pfam:PF00398"
FT   misc_feature    111965..112048
FT                   /note="PS01131 Ribosomal RNA adenine dimethylases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01131"
FT   CDS_pept        112742..113983
FT                   /transl_table=11
FT                   /locus_tag="CBO0082"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00249 SWALL:Q899D4 (EMBL:AE015936) (438 aa) fasta
FT                   scores: E(): 3.8e-27, 45.7 38d in 431 aa, and to
FT                   Clostridium acetobutylicum hypothetical protein Cac2985
FT                   SWALL:Q97EX1 (EMBL:AE007795) (491 aa) fasta scores: E():
FT                   5.8e-27, 40.65 38d in 487 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXX9"
FT                   /protein_id="CAL81638.1"
FT                   /translation="MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKIS
FT                   YYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINA
FT                   DKISGAAIVKFIDSNIISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTIFDK
FT                   YEESIEEIKIKDSNSANKDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEK
FT                   ANEKPNEKPNEKANEKPNEKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLE
FT                   GKYFRSLVEDLDSIDNITDEIKNCIWYKIDAKDEDDMRNTCNYDKFMVLYNPMLGYYPY
FT                   IKKHGHYILGYKCDISGNMKYLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLM
FT                   FYDYKTNNILIPVK"
FT   CDS_pept        114140..114727
FT                   /transl_table=11
FT                   /locus_tag="CBO0083"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac2984 SWALL:Q97EX2 (EMBL:AE007795) (221 aa) fasta
FT                   scores: E(): 6.8e-24, 36.92 38d in 195 aa, and to
FT                   Clostridium tetani conserved membrane-associated protein
FT                   ctc00250 SWALL:Q899D3 (EMBL:AE015936) (196 aa) fasta
FT                   scores: E(): 6.2e-19, 34.02 38d in 194 aa"
FT                   /db_xref="GOA:A5HXY0"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY0"
FT                   /protein_id="CAL81639.1"
FT                   /translation="MKVLIINKKRFGVTMIIIGLMLILFGLEKNFDNRLKIAALIHNNV
FT                   SSFKEYNILNGKISYKLPSNWEINEEIINGEDIIYSNSFIDKKNNMKGFIQLWNYKGDL
FT                   KAFIKHSKEVSDKQQVDYTKYNVVPVDLNNMKGYLAQYSILKENKEYVAYEYFFKVEEG
FT                   FIRVSFFVPEKYYQESIETVFNTILKNIVYKH"
FT   sig_peptide     114140..114227
FT                   /locus_tag="CBO0083"
FT                   /note="probabilty 0.829, with cleavage site probability
FT                   0.329 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    114167..114220
FT                   /note="1 probable transmembrane helix predicted for CBO0083
FT                   by TMHMM2.0 at aa 13-30"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        114896..115729
FT                   /transl_table=11
FT                   /locus_tag="CBO0084"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00252 SWALL:Q899D1 (EMBL:AE015936) (279 aa) fasta
FT                   scores: E(): 2e-49, 52.51 38d in 278 aa, and to Clostridium
FT                   acetobutylicum hypothetical protein Cac2983 cac2983
FT                   SWALL:Q97EX3 (EMBL:AE007795) (284 aa) fasta scores: E():
FT                   1.4e-40, 45.93 38d in 283 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY1"
FT                   /protein_id="CAL81640.1"
FT                   /translation="MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIK
FT                   ENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGN
FT                   KAYKFSYIAGLDKKEAGNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIE
FT                   VLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHN
FT                   IEVSVDTEGYKSTMYKAVIKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF"
FT   sig_peptide     114896..114968
FT                   /locus_tag="CBO0084"
FT                   /note="probabilty 0.958, with cleavage site probability
FT                   0.533 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    114914..114967
FT                   /note="1 probable transmembrane helix predicted for CBO0084
FT                   by TMHMM2.0 at aa 7-24"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    114935..114967
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        115897..116958
FT                   /transl_table=11
FT                   /locus_tag="CBO0085"
FT                   /product="putative exported protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   membrane-fusion protein acra2 or tte1200 SWALL:Q8RAL3
FT                   (EMBL:AE013082) (390 aa) fasta scores: E(): 1.4e-23,37.98
FT                   38d in 387 aa, and to Clostridium tetani conserved
FT                   membrane-associated protein ctc00484 SWALL:Q898G8
FT                   (EMBL:AE015937) (437 aa) fasta scores: E(): 9e-15, 25.87 id
FT                   in 429 aa"
FT                   /db_xref="GOA:A5HXY2"
FT                   /db_xref="InterPro:IPR006143"
FT                   /db_xref="InterPro:IPR032317"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY2"
FT                   /protein_id="CAL81641.1"
FT                   /translation="MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVE
FT                   SYLSTTGNVVSKNKKEYFGGQAKVKKVNVKVGDKVKKGQSLLNFDMSELENDRQVAQME
FT                   YDNAISQKKALKSQKNSEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEETVA
FT                   DIDGIVTEVNAQAGGISTGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDD
FT                   KKYEAKVDFIAPTAKKTVKEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESK
FT                   NVLKIPLESIKTDKYNKSHVYVVEEGKVKEKPVQLGTQSDMEAEIISGLKSGEKVILNP
FT                   NASIKTGVSVQEK"
FT   sig_peptide     115897..115972
FT                   /locus_tag="CBO0085"
FT                   /note="probabilty 0.998, with cleavage site probability
FT                   0.509 between residues 26 and 27"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    115915..115968
FT                   /note="1 probable transmembrane helix predicted for CBO0085
FT                   by TMHMM2.0 at aa 7-24"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        116969..117664
FT                   /transl_table=11
FT                   /locus_tag="CBO0086"
FT                   /product="ABC transporter ATP-binding protein"
FT                   /note="Similar to Clostridium tetani ABC transporter
FT                   ATP-binding protein ctc00485 SWALL:Q898G7 (EMBL:AE015937)
FT                   (238 aa) fasta scores: E(): 1.8e-49, 64.31 38d in 227
FT                   aa,and to Thermoanaerobacter tengcongensis ABC-type
FT                   transport systems, involved in lipoprotein release, ATPase
FT                   components phnl2 or tte1199 SWALL:Q8RAL4 (EMBL:AE013082)
FT                   (231 aa) fasta scores: E(): 9e-49, 62.55 38d in 227 aa"
FT                   /db_xref="GOA:A5HXY3"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY3"
FT                   /protein_id="CAL81642.1"
FT                   /translation="MLIVKDIEKTYNTGEISFKALKGISLKIERGEFTSIMGPSGSGKS
FT                   TFMNILGCLDKMDKGEYILNGKDVTDLTENDLAYVRNKEIGFVFQAFNLLPRMTILDNV
FT                   ELPMVYAGVPLKERKERALSALERVGLIERINHRPNEISGGQKQRVAIARAIVNNPSVI
FT                   MADEPTGNLDTKSSLDIMRIFQNLNEEGSTIIMVTHEPDIAKYTKRVVKFRDGHIVSDE
FT                   KVLNREIVE"
FT   misc_feature    117059..117616
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 197.5, E-value 2.2e-56"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    117080..117103
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    117335..117364
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00339"
FT   misc_feature    117392..117436
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        117661..118869
FT                   /transl_table=11
FT                   /locus_tag="CBO0087"
FT                   /product="ABC transporter permease protein"
FT                   /note="Similar to Clostridium tetani ABC transporter
FT                   permease protein ctc00486 SWALL:Q898G6 (EMBL:AE015937) (404
FT                   aa) fasta scores: E(): 1e-60, 47.66 38d in 407 aa,and to
FT                   Thermoanaerobacter tengcongensis ABC-type transport
FT                   systems, involved in lipoprotein release, permease
FT                   components tte1198 SWALL:Q8RAL5 (EMBL:AE013082) (405 aa)
FT                   fasta scores: E(): 4.1e-65, 50.73 38d in 406 aa"
FT                   /db_xref="GOA:A5HXY4"
FT                   /db_xref="InterPro:IPR003838"
FT                   /db_xref="InterPro:IPR025857"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY4"
FT                   /protein_id="CAL81643.1"
FT                   /translation="MKFLENLKMALDSIKSNKMRSFLTMLGIIIGISSVITIVSLGKGG
FT                   QNTITGEFEKIGSATVSIKVDGSKASSNDYIKQEDVDIIKNKIEKVKYVAPIVSRPGSV
FT                   TEGTKNKKLYIDGSTPDVQYVTNAEMVYGRFFNEGEHVEGKPVVIIDERSARNIFGTED
FT                   VVGRKLKISAKTSSKQVTVIGVSKSESGPFSGGGEDSPIFLTCPINFLKDLYPEDFIID
FT                   SLYIIATDKNDTEEVGVMAKNILENRHHNKGKDMYKVENMLKQLDEVNKVIGIFTTFIG
FT                   AVAAISLLVGGIGVMNIMLVSVTERTREIGIRKALGATTKNILIQFLTESVIISLIGGL
FT                   IGMILGIVFAEIIGKFIKISPSVSIAAILIAILFSSSVGIFFGIYPAKKAAKLNPIDAL
FT                   RYE"
FT   sig_peptide     117661..117784
FT                   /locus_tag="CBO0087"
FT                   /note="probabilty 0.948, with cleavage site probability
FT                   0.345 between residues 42 and 43"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(117721..117780,118474..118542,118651..118719,
FT                   118747..118815)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0087 by TMHMM2.0 at aa 21-40, 272-294, 331-353 and
FT                   363-385"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    118477..118845
FT                   /note="Pfam match to entry PF02687 FtsX, Predicted
FT                   permease, score 150.1, E-value 4.1e-42"
FT                   /inference="protein motif:Pfam:PF02687"
FT   CDS_pept        118951..119793
FT                   /transl_table=11
FT                   /locus_tag="CBO0088"
FT                   /product="putative ATP-binding protein"
FT                   /note="Similar to Escherichia coli, and Escherichia coli O6
FT                   Mrp protein or b2113 or c2641 SWALL:MRP_ECOLI
FT                   (SWALL:P21590) (369 aa) fasta scores: E(): 6.7e-31, 42.33
FT                   id in 248 aa, and to Clostridium tetani Mrp protein
FT                   ctc00253 SWALL:Q899D0 (EMBL:AE015936) (280 aa) fasta
FT                   scores: E(): 8.9e-72, 73.4 38d in 282 aa"
FT                   /db_xref="GOA:A5HXY5"
FT                   /db_xref="InterPro:IPR000808"
FT                   /db_xref="InterPro:IPR019591"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR033756"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY5"
FT                   /protein_id="CAL81644.1"
FT                   /translation="MSNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKS
FT                   TITGILATKLREEGYKVGVLDGDITGPSMPRFFGISDKRATIIPTGENEEVKIIPVETK
FT                   TGIKVMSLNLLTEQEEAPVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDIALT
FT                   VMQSLPVTNMVVVSTPQDMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNV
FT                   FSKKSAEEQAEYLNIPLIADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK"
FT   misc_feature    119062..119085
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    119377..119427
FT                   /note="PS01215 Mrp family signature."
FT                   /inference="protein motif:ProSite:PS01215"
FT   CDS_pept        119933..120124
FT                   /transl_table=11
FT                   /locus_tag="CBO0089"
FT                   /product="ferredoxin"
FT                   /note="Similar to Thermotoga maritima ferredoxin Fdx or
FT                   tm0927 SWALL:FER_THEMA (SWALL:P46797) (60 aa) fasta scores:
FT                   E(): 0.00016, 38.98 38d in 59 aa, and to Clostridium
FT                   perfringens ferredoxin Fer or cpe2511 SWALL:Q8XHH3
FT                   (EMBL:AP003194) (62 aa) fasta scores: E(): 3.4e-07, 45.76
FT                   38d in 59 aa"
FT                   /db_xref="GOA:A5HXY6"
FT                   /db_xref="InterPro:IPR001080"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY6"
FT                   /protein_id="CAL81645.1"
FT                   /translation="MKIEIDKDKCIGCGLCEEIGDGLFKVGDEDKAELTIDPIPIMKEQ
FT                   YGKEAEYVCPVNAIRTII"
FT   misc_feature    119939..120004
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 11.5, E-value 0.0039"
FT                   /inference="protein motif:Pfam:PF00037"
FT   CDS_pept        120139..120333
FT                   /transl_table=11
FT                   /locus_tag="CBO0090"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Borrelia turicatae repeat motif protein
FT                   BdrA6- SWALL:Q9RGH2 (EMBL:AF128449) (62 aa) fasta scores:
FT                   E(): 2.8, 36.36 38d in 55 aa, and to Plasmodium yoelii
FT                   yoelii hypothetical protein py07231 SWALL:EAA19615
FT                   (EMBL:AABL01002604) (76 aa) fasta scores: E(): 2.7, 31.25
FT                   id in 48 aa"
FT                   /db_xref="GOA:A5HXY7"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY7"
FT                   /protein_id="CAL81646.1"
FT                   /translation="MLLNKINIFDRFTKFVIFGIMNVVINLCMILVKFLQNLSFIKIYK
FT                   ILQESIVMSFPYITIDIAF"
FT   misc_feature    120181..120243
FT                   /note="1 probable transmembrane helix predicted for CBO0090
FT                   by TMHMM2.0 at aa 15-35"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(120570..120746)
FT                   /transl_table=11
FT                   /locus_tag="CBO0091"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY8"
FT                   /protein_id="CAL81647.1"
FT                   /translation="MLGEIIDINENNIIVKFSNGLSLAVAIEDLHDNAKIGDKININPC
FT                   TEQTPYNKIINFF"
FT   CDS_pept        120824..121894
FT                   /transl_table=11
FT                   /locus_tag="CBO0092"
FT                   /product="putative signaling protein"
FT                   /note="Similar to Clostridium tetani signaling protein
FT                   ctc01837 SWALL:Q893I5 (EMBL:AE015942) (449 aa) fasta
FT                   scores: E(): 1.8e-10, 26.93 38d in 427 aa, and to
FT                   Shewanella oneidensis cyclic nucleotide
FT                   phosphodiesterase,putative so3556 SWALL:Q8EBG2
FT                   (EMBL:AE015792) (420 aa) fasta scores: E(): 3.6e-15, 24.37
FT                   38d in 357 aa"
FT                   /db_xref="GOA:A5HXY9"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="InterPro:IPR029016"
FT                   /db_xref="InterPro:IPR029787"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXY9"
FT                   /protein_id="CAL81648.1"
FT                   /translation="MLYVLIITLFLIMIVYESIIIINLRKNIKKLEYSKRMIYNMTKNV
FT                   NKEKTIDNVYEIMLKTAINLIPKATQGSILTMDKEENFNYVAILGYDNKLKNIKLNKKE
FT                   VYLYKINRFKETAIIENPIKLDEKILNKEKINEFKELEALNISCIISAPIYIDNKLFGQ
FT                   INIDCTKENYKFKKEDLELMDHIKDELQLIIKSFMVKEELIHKANYDELTKIFNRRYFN
FT                   EIMKNEIKEGNKILVLIDIDNFKTINDIYGHSTGDFILRVFANLIKRYLGDKDLFFRFG
FT                   GDEFIVLFDDLDDKSVISFMENIRQKINKDKIKGINIDFSYGISKLKNYNMTNYEDIIN
FT                   LADKNMYINKNKKIIV"
FT   misc_feature    120827..120895
FT                   /note="1 probable transmembrane helix predicted for CBO0092
FT                   by TMHMM2.0 at aa 2-24"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    121430..121882
FT                   /note="Pfam match to entry PF00990 GGDEF, GGDEF
FT                   domain,score 141.5, E-value 1.6e-39"
FT                   /inference="protein motif:Pfam:PF00990"
FT   CDS_pept        121951..122679
FT                   /transl_table=11
FT                   /locus_tag="CBO0093"
FT                   /product="putative cations transporter"
FT                   /note="Similar to Bacillus subtilis SapB protein or
FT                   bsu06650 SWALL:SAPB_BACSU (SWALL:Q45514) (232 aa) fasta
FT                   scores: E(): 7.7e-13, 28.15 38d in 206 aa, and to
FT                   Clostridium perfringens probable Mg2+ transport protein
FT                   cpe0592 SWALL:Q8XMU6 (EMBL:AP003187) (241 aa) fasta scores:
FT                   E(): 1.2e-27, 39.24 38d in 237 aa"
FT                   /db_xref="GOA:A5HXZ0"
FT                   /db_xref="InterPro:IPR003416"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ0"
FT                   /protein_id="CAL81649.1"
FT                   /translation="MDRKQVVFRIFLSIVIGGAIGFERERKNRPAGFRTHILVCIGSCI
FT                   AVMIQLYIIQYMKEMIQMDGDFKYLLSADISRMASQVITGVGFLGAGTIIRDKGAVKGL
FT                   TTAASIWVVACIGISVGLGFYFLSLVGFLGLIVSLIVFENIESSVIDKNKEYNINIEYL
FT                   PKNNVIEYIIDELLKNEITIKSIRIFDKNINENRTIKIKLTISTNNRLNFLSVIQNLQS
FT                   NKNIHDIDILKINKIKNRIL"
FT   misc_feature    order(121963..122016,122053..122121,122179..122235,
FT                   122272..122340)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0093 by TMHMM2.0 at aa 5-22, 35-57, 77-95 and 108-130"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    121978..122403
FT                   /note="Pfam match to entry PF02308 MgtC, MgtC family,score
FT                   130.5, E-value 3.2e-36"
FT                   /inference="protein motif:Pfam:PF02308"
FT   misc_feature    122263..122295
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        122969..125110
FT                   /transl_table=11
FT                   /gene="nrdD"
FT                   /locus_tag="CBO0094"
FT                   /product="anaerobic ribonucleoside-triphosphate reductase"
FT                   /EC_number="1.17.4.2"
FT                   /note="Similar to Escherichia coli anaerobic
FT                   ribonucleoside-triphosphate reductase NrdD or b4238
FT                   SWALL:NRDD_ECOLI (SWALL:P28903) (712 aa) fasta scores: E():
FT                   3.3e-50, 32.23 38d in 726 aa, and to Clostridium
FT                   acetobutylicum oxygen-sensitive ribonucleoside-triphosphate
FT                   reductase NrdD cac0480 SWALL:Q97LS4 (EMBL:AE007562) (702
FT                   aa) fasta scores: E(): 1.2e-139, 74.07 38d in 706 aa"
FT                   /db_xref="GOA:A5HXZ1"
FT                   /db_xref="InterPro:IPR005144"
FT                   /db_xref="InterPro:IPR012833"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ1"
FT                   /protein_id="CAL81650.1"
FT                   /translation="MLYVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQK
FT                   VIKKIEDSNKEEISVEDIQNLVEHVLIDSGFKEIGYAYSNYRRERTKIREIKSELMTAI
FT                   EKIGVETDRDNANVGNNFSSKLLRIASESNKWYNLGVMPKHLAKLHENGDIYYHDLDSY
FT                   NLTVNCLNIDTGRILQRGFNTGYGTINAPKRIESAAELSCILLQSTQNDMFGGQAHVNF
FT                   DNDMALFIPNTRSEIRKEILENLKGLEVQEEVLNKEKIDELVEERLRLRIHQAMQGIVY
FT                   NLNTMHSRAGSQVPFSSINIGIPKDKDAALICEIFLKEYEKGLGKGEQPIFPNIIFRVK
FT                   EGVNREEKDPYYYLFKLAAKIAGKRMNPTFMNMDSDFNKEYYDKGIIPATMGCRTYVCS
FT                   NISGEEGPAGRGNIAPTTINLPRVGILAKKDINKFFNLLDNRLELARESLLHRYNVLKK
FT                   LRVKDLPFVVGEGLMKGSENLLPDDSIEPILKQGSWAIGFIGIAETLTALIGSHHGETE
FT                   EAKELGVKIVSHIRDFCDKYKEIDKLNWSCYATPAEGLSGKFILQDKKVFGEIKGVTDK
FT                   NYYTNSYHIPVGFPISIKEKINIEAPYHKICNGGHISYIELDDYPSEEVIMDIIQYAYR
FT                   NTNISYMGINFHIKYCRECGTYLGVEEEACNNCGSTNIQGISRVTGYLSLDERFGSGKV
FT                   AERADRTSNNSSHRKIYNA"
FT   misc_feature    122972..123250
FT                   /note="Pfam match to entry PF03477 ATP-cone, ATP cone
FT                   domain, score 79.2, E-value 8.6e-21"
FT                   /inference="protein motif:Pfam:PF03477"
FT   CDS_pept        125127..125642
FT                   /transl_table=11
FT                   /gene="nrdG"
FT                   /locus_tag="CBO0095"
FT                   /product="anaerobic ribonucleoside-triphosphate reductase
FT                   activating protein"
FT                   /EC_number="1.97.1.4"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 anaerobic ribonucleoside-triphosphate reductase
FT                   activating protein NrdG or b4237 or z5847 or ecs5214
FT                   SWALL:NRDG_ECOLI (SWALL:P39329) (154 aa) fasta scores: E():
FT                   1.3e-09, 34.24 38d in 146 aa, and to Clostridium tetani
FT                   anaerobic ribonucleoside-triphosphate reductase activating
FT                   protein ctc00258 SWALL:Q899C6 (EMBL:AE015936) (169 aa)
FT                   fasta scores: E(): 2.1e-34, 61.58 38d in 164 aa"
FT                   /db_xref="GOA:A5HXZ2"
FT                   /db_xref="InterPro:IPR001989"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="InterPro:IPR012837"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="InterPro:IPR034457"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ2"
FT                   /protein_id="CAL81651.1"
FT                   /translation="MENKYLQVAGFLDNSLVNGLGLRSVVFVSGCKHNCKECQNKEMQS
FT                   FCYGDKISLKDILKRIESNVPLIRGVTFSGGEPLEHIKELSSLAEEIKSLGLNIWCYTG
FT                   YTFEYIKKEINKNHDLKKLIESIDVLVDGKYDKSKKDSSLKYKGSSNQRIIDVNKSLDR
FT                   DEIVILDL"
FT   misc_feature    125181..125246
FT                   /note="PS01087 Radical activating enzymes signature."
FT                   /inference="protein motif:ProSite:PS01087"
FT   misc_feature    125199..125609
FT                   /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM
FT                   superfamily, score 8.3, E-value 0.063"
FT                   /inference="protein motif:Pfam:PF04055"
FT   CDS_pept        complement(126179..126853)
FT                   /transl_table=11
FT                   /locus_tag="CBO0096"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum membrane
FT                   protein cap0154 SWALL:Q97TF0 (EMBL:AE001438) (225 aa) fasta
FT                   scores: E(): 3.1e-26, 39.64 38d in 222 aa, and to Bacillus
FT                   cereus hypothetical protein bc4207 SWALL:Q818P2
FT                   (EMBL:AE017011) (226 aa) fasta scores: E(): 4.2e-06,24.31
FT                   38d in 218 aa"
FT                   /db_xref="GOA:A5HXZ3"
FT                   /db_xref="InterPro:IPR008316"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ3"
FT                   /protein_id="CAL81652.1"
FT                   /translation="MNNIKELVKSTNELSKSLNDANDETFTNITCYLRTSSLSESQCEE
FT                   SIHEILAMFLTAENNNESIENIIGNDSQKFCDEIIESYATKKFSKENVIVNLKIILSCF
FT                   FILWSINIVFDYIPNMIKSKSLLLNYNFSLPFIINTVLITFLSFAVFNYMGKTAFKEES
FT                   NKIFVIKFMLLYIIFIIISVFMWKKLSKIILFTTKIHYVLIFIAISYLILFLLSQYTYK
FT                   QK"
FT   misc_feature    complement(order(126191..126259,126296..126355,
FT                   126392..126460,126503..126571))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0096 by TMHMM2.0 at aa 95-117, 132-154, 167-186 and
FT                   199-221"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(126855..127193)
FT                   /transl_table=11
FT                   /locus_tag="CBO0097"
FT                   /product="PadR-family transcriptional regulator"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   transcriptional regulator cap0153 SWALL:Q97TF1
FT                   (EMBL:AE001438) (115 aa) fasta scores: E(): 2.3e-29,73.45
FT                   38d in 113 aa, and to Clostridium tetani putative
FT                   transcriptional regulator PadR or ctc00601 SWALL:Q897X0
FT                   (EMBL:AE015938) (106 aa) fasta scores: E(): 3.6e-20,52.88
FT                   38d in 104 aa"
FT                   /db_xref="InterPro:IPR005149"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ4"
FT                   /protein_id="CAL81653.1"
FT                   /translation="MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEG
FT                   TIYPLLIRLEKNNFLNSTKKPSPYGPKRKYYTLSEKGVEELNYFYTNWLELKNSVDKIF
FT                   SNYSKGED"
FT   misc_feature    complement(126927..127178)
FT                   /note="Pfam match to entry PF03551 PadR, Transcriptional
FT                   regulator PadR-like family, score 102.3, E-value 9.7e-28"
FT                   /inference="protein motif:Pfam:PF03551"
FT   CDS_pept        complement(127314..127952)
FT                   /transl_table=11
FT                   /locus_tag="CBO0098"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum Zn-dependent
FT                   hydrolases of the metallo-beta-lactamase superfamily
FT                   cac0482 SWALL:Q97LS2 (EMBL:AE007563) (211 aa) fasta scores:
FT                   E(): 2e-35, 44.07 38d in 211 aa, and to Thermoanaerobacter
FT                   tengcongensis predicted Zn-dependent hydrolases of the
FT                   beta-lactamase fold tte2532 SWALL:Q8R787 (EMBL:AE013195)
FT                   (212 aa) fasta scores: E(): 1.4e-31, 44.5 id in 200 aa"
FT                   /db_xref="InterPro:IPR036866"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ5"
FT                   /protein_id="CAL81654.1"
FT                   /translation="MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTIS
FT                   HNHFDHNFKDELNKNCIIIDTPIEYKYEDLKIKGFKSYHDKLNGLKRGNNIIFKFNIDG
FT                   FNVCHLGDLGHLLPKNFIYNLGPIDVLLVPIGGNYTLNGKEAATLCKNLNSHIVIPMHF
FT                   GLNNIKIKLDGLEDFLIHMDKNLEIGSNIITLENNIKNYNNMVYILNMI"
FT   misc_binding    128105..128364
FT                   /locus_tag="CBO0099"
FT                   /bound_moiety="tRNA"
FT                   /note="T-box leader"
FT   CDS_pept        128388..131510
FT                   /transl_table=11
FT                   /locus_tag="CBO0099"
FT                   /product="isoleucyl-tRNA synthetase"
FT                   /note="Similar to Pseudomonas fluorescens isoleucyl-tRNA
FT                   synthetase 2 IleS2 SWALL:Q8L1B1 (EMBL:AB062785) (1030 aa)
FT                   fasta scores: E(): 7.8e-137, 36.38 38d in 1006 aa, and to
FT                   Clostridium acetobutylicum isoleucyl-tRNA synthetase
FT                   cac3038 SWALL:Q97ES0 (EMBL:AE007801) (1035 aa) fasta
FT                   scores: E(): 0, 77.71 38d in 1032 aa"
FT                   /db_xref="GOA:A5HXZ6"
FT                   /db_xref="InterPro:IPR001412"
FT                   /db_xref="InterPro:IPR002300"
FT                   /db_xref="InterPro:IPR002301"
FT                   /db_xref="InterPro:IPR009008"
FT                   /db_xref="InterPro:IPR009080"
FT                   /db_xref="InterPro:IPR013155"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR023586"
FT                   /db_xref="InterPro:IPR033709"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ6"
FT                   /protein_id="CAL81655.1"
FT                   /translation="MGMYNKIDSNKSFVQREKGIADLWKDRGVIEKSFNLNEDGEYFTF
FT                   YDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELEIEKKLGI
FT                   SGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNYIESVWW
FT                   ALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYKDVKEATAFVKFKIKGKENKYF
FT                   LAWTTTPWTLPSNVTLAINKSYDYVEILNNDEHYILAKELLGKVIEGEYEVVKEFKGEE
FT                   IVGVEYEQLFKFEVPEKKAFYVVHADYVTLTDGTGIVHTAPAYGDDDSKTGKKYDLPLI
FT                   NLVDSEGKFVDSVEPWKGMFVKKADPKILEYLKENGMLYKSEKFTHSYPHCWRCNTPLL
FT                   YYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFVENVIDWGISRDRYWGTPL
FT                   PIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKLNCPHCGKEMTRTNEVID
FT                   CWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGWFYTLLAISTALFGKSSY
FT                   ENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPWLPTRFSEED
FT                   VKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDKWILSKLNSLIKNVEE
FT                   HLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGAYTTLYTVLTTVIKV
FT                   AAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWPSYNESTMDKDLEEKMGLAYKIVKLG
FT                   RSARNSVNIKNRQPLKKMLVSTKELPEYYEDIIREELNIKEILSGADLSDYVNFEIKPN
FT                   LPILGKKYGKFIPAIRKEISSMNQMELAQSINNSRSVFINVEGCEDQIELTAENLLVTM
FT                   QGLEGFAFAGEGEIGVVLDTHITEELKEEGFLREILSKVQNMRKESGFEVADKINLYVS
FT                   GNNTLNAIVKKYEDEIKVETLSVKVMYDENKDYIECKINGENYNIAMEVVK"
FT   misc_feature    128442..130283
FT                   /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA
FT                   synthetases class I (I, L, M and V), score 845.2, E-value
FT                   2.4e-251"
FT                   /inference="protein motif:Pfam:PF00133"
FT   misc_feature    128535..128570
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00178"
FT   misc_feature    131217..131237
FT                   /note="PS00307 Legume lectins beta-chain signature."
FT                   /inference="protein motif:ProSite:PS00307"
FT   CDS_pept        131661..132659
FT                   /transl_table=11
FT                   /gene="ccpA"
FT                   /gene_synonym="regA"
FT                   /gene_synonym="repA"
FT                   /locus_tag="CBO0100"
FT                   /product="LacI-family transcriptional regulator (catabolite
FT                   control protein)"
FT                   /note="Similar to Clostridium saccharobutylicum hth-type
FT                   transcriptional regulator RegA or RepA SWALL:REGA_CLOSA
FT                   (SWALL:Q45831) (332 aa) fasta scores: E(): 1.2e-72, 65.75
FT                   id in 330 aa, and to Bacillus megaterium glucose-resistance
FT                   amylase regulator CcpA SWALL:CCPA_BACME (SWALL:P46828) (332
FT                   aa) fasta scores: E(): 3.2e-45, 44.61 id in 334 aa"
FT                   /db_xref="GOA:A5HXZ7"
FT                   /db_xref="InterPro:IPR000843"
FT                   /db_xref="InterPro:IPR001761"
FT                   /db_xref="InterPro:IPR010982"
FT                   /db_xref="InterPro:IPR028082"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ7"
FT                   /protein_id="CAL81656.1"
FT                   /translation="MAVSIKDVAKEAQVSIATVSRVLNNIDVVNEDTKKKVLDAIDKLG
FT                   YRPNIVARSLKTQKSKTIGIIIPDISNQFYPEIVRGAEDVANIYDYNIMLCNTDLDPEK
FT                   EMEYLRVLREKMADGVLYMSNSLEKNILELIKSLQLPVVLVETKDSEEKLPSVTIDNLK
FT                   ASLDATEYLINKGNKNIAYIGLHEDMANAAVLRYEGYKLALRKNNIKENKDLVYLGGMK
FT                   VRDGYEGINKILEKEKIDAIFCADDEIAMGAINALRDKNIKVPDEIDVMGFNNIYSSNV
FT                   FYPKLTTIGQPMYDMGSVGMRMLIKIINKEELENDNYVLQHKIVERDSCKK"
FT   misc_feature    131667..131732
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1870.000, SD 5.56 at aa 3-24, sequence
FT                   VSIKDVAKEAQVSIATVSRVLN"
FT   misc_feature    131667..131744
FT                   /note="Pfam match to entry PF00356 lacI, Bacterial
FT                   regulatory proteins, lacI family, score 41.5, E-value
FT                   2e-09"
FT                   /inference="protein motif:Pfam:PF00356"
FT   misc_feature    131673..131729
FT                   /note="PS00356 Bacterial regulatory proteins, lacI family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00356"
FT   misc_feature    131838..132644
FT                   /note="Pfam match to entry PF00532
FT                   Peripla_BP_like,Periplasmic binding proteins and sugar
FT                   binding domain of the LacI family, score 121.2, E-value
FT                   2e-33"
FT                   /inference="protein motif:Pfam:PF00532"
FT   CDS_pept        132875..136927
FT                   /transl_table=11
FT                   /locus_tag="CBO0101"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani DNA helicase ctc00264
FT                   SWALL:Q899C1 (EMBL:AE015936) (1352 aa) fasta scores: E():
FT                   1e-180, 40.17 38d in 1359 aa, and to Clostridium
FT                   acetobutylicum superfamily i DNA helicase cac3036
FT                   SWALL:Q97ES1 (EMBL:AE007800) (1351 aa) fasta scores: E():
FT                   2.2e-177, 41.54 38d in 1343 aa"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR041677"
FT                   /db_xref="InterPro:IPR041679"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ8"
FT                   /protein_id="CAL81657.1"
FT                   /translation="MKCSEKIKNIFYYLLRIKRMNKCSSDVRTYEALYTKKDILNNSYC
FT                   NVSRDKEDNVTIKISKEAGKIYDKIYKQYLDGGNENEIILGQAILALRKNKNIIHPVIT
FT                   SKVKVDFIDKENVLSLKIPSNIKLEIEVCDCLNKTLFKKIISRKNDWEKEKIDIMNYDN
FT                   IKNKIQLLLNNDSEIVFKDIEDLNKIEITEEPVIYNCPILVIRKADNSLWSKEFQSIVE
FT                   EIDNGYDIPKTIEALVEEKEIEDDYIHKDQWKECKEDILFPLDANEEQISIVKKICENE
FT                   AILVQGPPGTGKSHTIANLICHFLAHGKKVLITSETSRALRVLINKIPKDIKPLCVNLL
FT                   DDNNGEYELEQCIKNISDNLCKNPSEIIDDIYILNNERKECKKNQQVLYNKLKEIEFME
FT                   NKKIHCKGNYYKLIHIGSWLNENEYKYGWIRDNIRYEDIKPVNEDQFNKLIELLKNNGK
FT                   EYIGNINELIFICNKIPSYNEVENKLDRMIYLESNLNFYKNKIKGWYIPAECKCNYDIL
FT                   SDFLYDCIEKMKSIIEEPILGKMFELYYSSEIFRDSINNFMLNLNSSKEKLIKIRENIN
FT                   QYSIEIKEIKDKDMFIKDYEKVYSKIKGKKKISKIFKAINSKYDYIFKNCYINGENIKS
FT                   IEQLNIINDYIEERKIYNFLNRLWENIINSYIQEDSNYNIDNLISIERITNNLDTIMNW
FT                   NREYRDKIIKLLGRIRIPININWYEINTYEYFIQCIECIKAINEYNDLKAFMEIIKKQV
FT                   RNFQSLNSIIKGIDKENIDYIKEAYSYIEKIMSMKSDMDEINYVYKKLEESCPRTLEFI
FT                   LENYKKNYKFNSWENAWKWAQYNNLFKKLEKIDEKTLQGQLIEEKNKEKEIINQIISKK
FT                   AWKNIILNINEEEKRSLFSWVQAVKRIGKGRGKFVLQYSNIAKKEMEKCKSIIPVWIMP
FT                   LEKVIENIKPSKEQFDVVIFDESSQSNIFAISALMRAKKAIIVGDDKQISPEIVGMDQG
FT                   MISNFIDKYLDGIPHNQWFDLQTSLYDTALRTFKDRIMLKEHFRSVPEIVQFSNKLCYG
FT                   DLIVPLRYPKIREAFNSPIKCIKVEDGYREKTKQININEAEALVNKLLECCRDSKYNGM
FT                   TMGVISLLGDAQSEFIENLLKNNLSKEEIKRRKLVCGDAYSFQGDERDIIFLSMVVGDN
FT                   MKYTALTKETDIKRFNVAVSRARNQIFLFYSIDYKNINNDCVRYKLIDYCNNYKNYKSK
FT                   LPDINYVMESKFQKDIYNNIRNLKCDIKSNIKLGKYIIDFILEGEHNRIAIICDDGNLY
FT                   ENNNVEKVLNLEMDLTRLGWAFYKIRGSKFYRNPEVEVEKLHKFLIESGLYKDDSKEIL
FT                   KNNLLVV"
FT   misc_feature    133733..133756
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        137002..138069
FT                   /transl_table=11
FT                   /locus_tag="CBO0102"
FT                   /product="mannose-1-phosphate guanylyltransferase"
FT                   /EC_number="2.7.7.22"
FT                   /note="Similar to Escherichia coli mannose-1-phosphate
FT                   guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI
FT                   (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51
FT                   id in 356 aa, and to Clostridium tetani mannose-6-phosphate
FT                   isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa)
FT                   fasta scores: E(): 5.9e-94,70.33 38d in 354 aa"
FT                   /db_xref="GOA:A5HXZ9"
FT                   /db_xref="InterPro:IPR005835"
FT                   /db_xref="InterPro:IPR029044"
FT                   /db_xref="UniProtKB/TrEMBL:A5HXZ9"
FT                   /protein_id="CAL81658.1"
FT                   /translation="MLYALILAGGKGTRLYPLSRSENPKQFLKVINNRSFLRATVDRIK
FT                   PLVNNDNIYIVTNEEYMDKIYEELPEIKKENIFAEPYNRETATCIGFSAVKLLKKDKDA
FT                   SMIVLPSDHYIENEKEFTDVIKQGVDIVEKKRGLVTIGIKPLRPETGYGYIKMGDKVNS
FT                   QSFTYKVERFLEKPNLEIARDLVSSEEYLWNSGMFIWRADVYLREMEKYLPKIYKSMMR
FT                   IYANIDTDQEEKVIREEYEVIEGISVDFGIMQKTRKAYVIESNFKWDDMGSFTALSRFL
FT                   NSCRDNSICSNSYLKESENCSVITKDKLVIGFGIKDLVIVDGGDVLLIMDKYKDQEIKH
FT                   LVQELKANESLKKYI"
FT   misc_feature    137008..137862
FT                   /note="Pfam match to entry PF00483
FT                   NTP_transferase,Nucleotidyl transferase, score 194.3,
FT                   E-value 1.9e-55"
FT                   /inference="protein motif:Pfam:PF00483"
FT   misc_feature    137890..138048
FT                   /note="Pfam match to entry PF01050
FT                   MannoseP_isomer,Mannose-6-phosphate isomerase, score 39.8,
FT                   E-value 5.4e-10"
FT                   /inference="protein motif:Pfam:PF01050"
FT   CDS_pept        138405..139694
FT                   /transl_table=11
FT                   /locus_tag="CBO0103"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   upf0272 protein Cac0774 SWALL:Y774_CLOAB (SWALL:Q97KZ2)
FT                   (420 aa) fasta scores: E(): 5e-86, 59.19 38d in 424 aa,and
FT                   to Wolinella succinogenes hypothetical protein ws0139
FT                   SWALL:CAE09302 (EMBL:BX571657) (396 aa) fasta scores: E():
FT                   4e-48, 44.26 38d in 427 aa"
FT                   /db_xref="GOA:A5HY00"
FT                   /db_xref="InterPro:IPR002822"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY00"
FT                   /protein_id="CAL81659.1"
FT                   /translation="MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEF
FT                   EIKINKDSRKGISGTKVDVILKNLHEHNHEHEHSHDYVHSRGHEHEHNHEHSHEHEHNH
FT                   AHDHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDS
FT                   IVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILKDIPMVSSEE
FT                   IPFEATTPTGAAIVASTVYKFTQNKNFYIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQE
FT                   ENDIEKEEALILECNIDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLC
FT                   ENKLENIMREIIFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNS
FT                   KPEYEDCKKIALENNIPIKEVYEAVNERKE"
FT   misc_feature    138414..139691
FT                   /note="Pfam match to entry PF01969 DUF111, Protein of
FT                   unknown function DUF111, score 382.4, E-value 4.7e-112"
FT                   /inference="protein motif:Pfam:PF01969"
FT   CDS_pept        139699..140505
FT                   /transl_table=11
FT                   /locus_tag="CBO0104"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum ATP-utilizing
FT                   enzyme of the pp-loop superfamily cac0775 SWALL:Q97KZ1
FT                   (EMBL:AE007592) (271 aa) fasta scores: E(): 9.6e-58,59.62
FT                   38d in 265 aa, and to Thermoanaerobacter tengcongensis
FT                   ATP-utilizing enzymes of the pp-loop superfamily tte0769
FT                   SWALL:Q8RBP5 (EMBL:AE013044) (255 aa) fasta scores: E():
FT                   7.3e-44, 54.09 38d in 244 aa"
FT                   /db_xref="GOA:A5HY01"
FT                   /db_xref="InterPro:IPR005232"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR022310"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY01"
FT                   /protein_id="CAL81660.1"
FT                   /translation="MNINDKYNNLINYLKDLKSVAVAFSGGVDSTLLLKSAKEALGDNA
FT                   ISITIVSPYIPKWEIREARELVDKIGIKSYFVEVPMLEEIRSNPEDRCYICKKSVFNKI
FT                   KDLAREKGIKYIVDGTNADDTKDYRPGMRALKELDVKSPLLDNSINKEEIRVLSKELQL
FT                   DTWDKPAYACLLSRIPYNQKIKEKDLDRIEKAEVYMMKLGFRAVRVRSHGNLARIEVPQ
FT                   KERVKLFNEDILDKISKELKELGFKYVTVDIEGYKMGSLNAEINMK"
FT   CDS_pept        140525..141271
FT                   /transl_table=11
FT                   /locus_tag="CBO0105"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Myxococcus xanthus phosphoribosyl amino
FT                   imidizole carboxylase-like protein SWALL:Q8VQZ2
FT                   (EMBL:AF449411) (250 aa) fasta scores: E(): 2.7e-43,52.43
FT                   38d in 246 aa, and to Clostridium acetobutylicum ncair
FT                   mutase cac0776 SWALL:Q97KZ0 (EMBL:AE007592) (248 aa) fasta
FT                   scores: E(): 4.2e-63, 71.37 38d in 248 aa"
FT                   /db_xref="GOA:A5HY02"
FT                   /db_xref="InterPro:IPR000031"
FT                   /db_xref="InterPro:IPR035893"
FT                   /db_xref="InterPro:IPR039476"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY02"
FT                   /protein_id="CAL81661.1"
FT                   /translation="MNTEDIKKLLLDIKSDKISLEDGVDILQDLPFKDLGYAKIDNHRE
FT                   MRVGYPEVIYCAGKTVDQIKGIIEFMLTKENNILGTRATKEAYEEVKKICPEAEYDELA
FT                   RTIVIKKREVKSKGGYIAVVTAGTSDIPVSEEAAVTAEIFGNKVERIYDVGVAGIHRLF
FT                   DKLELIRGARVIVVAAGMEGALASVVGGLVDKPVIAVPTSIGYGANFQGLSALLSMLNS
FT                   CASGVSVVNIDNGFGAGYLASMINNL"
FT   CDS_pept        141496..142878
FT                   /transl_table=11
FT                   /locus_tag="CBO0106"
FT                   /product="radical SAM superfamily protein"
FT                   /note="Similar to Clostridium tetani Fe-s oxidoreductase
FT                   ctc00266 SWALL:Q899B9 (EMBL:AE015936) (460 aa) fasta
FT                   scores: E(): 2.1e-137, 71.08 38d in 460 aa, and to
FT                   Clostridium acetobutylicum moaa/nirj family fe-s
FT                   oxidoreductase cac2791 SWALL:Q97FE9 (EMBL:AE007776) (461
FT                   aa) fasta scores: E(): 2.8e-119, 61.6 38d in 461 aa"
FT                   /db_xref="GOA:A5HY03"
FT                   /db_xref="InterPro:IPR006638"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY03"
FT                   /protein_id="CAL81662.1"
FT                   /translation="MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKD
FT                   EDNLKRLKVVEDEYHNNPSTHEFVQNLFKTTDKNCIQKFFTNFFANAVWYGMPKREKLF
FT                   KEDGIKTPFVILISPSMRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYYFIV
FT                   LGGEPFFNEYMLDIYEKYNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKET
FT                   DARRGKGVFKQVMHGMDLLRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWY
FT                   FIFMPVGEDPDFNLMLTPEQRIYLGKEVRKIRNEKPYFAIDFFNDAPYVGGCIAGKYYC
FT                   HINSHEDVEPCIFAHFATDNLKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPK
FT                   VIREVASKTGARPTDKGAEMMLHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMS
FT                   KG"
FT   misc_feature    141844..142299
FT                   /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM
FT                   superfamily, score 79.0, E-value 1e-20"
FT                   /inference="protein motif:Pfam:PF04055"
FT   CDS_pept        143065..144339
FT                   /transl_table=11
FT                   /locus_tag="CBO0107"
FT                   /product="solute-binding protein"
FT                   /note="Similar to Agrobacterium radiobacter lactose-binding
FT                   protein precursor LacE SWALL:LACE_AGRRD (SWALL:P29822) (422
FT                   aa) fasta scores: E(): 1.9e-12, 21.24 id in 386 aa, and to
FT                   Clostridium acetobutylicum sugar-binding periplasmic
FT                   protein cac2912 SWALL:Q97F41 (EMBL:AE007788) (432 aa) fasta
FT                   scores: E(): 4.3e-18,22.63 38d in 433 aa"
FT                   /db_xref="GOA:A5HY04"
FT                   /db_xref="InterPro:IPR006059"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY04"
FT                   /protein_id="CAL81663.1"
FT                   /translation="MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVK
FT                   NNQAMNEGVKAFKEKYPNVEVEFYNKNRENMIDEFSKIKDKNSYPNIICLDDKDIKEFG
FT                   ARYYKDLIILNEIMKNNIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEKYNI
FT                   NSEDIKTWDDFIKAGEEIYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQI
FT                   DQPGYIDAFNILKRIESSNIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENG
FT                   KWKIMKLPSFEVGGKNSAIAGGTSIVGIKSCKESKDKLSMELIKNIALNKQSLNKGFLN
FT                   YGQFPSYKPTYEYARFFQNVNYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFK
FT                   KELLNSNDVEKELKNIKIFINSITK"
FT   sig_peptide     143065..143146
FT                   /locus_tag="CBO0107"
FT                   /note="probabilty 0.984, with cleavage site probability
FT                   0.394 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    143092..144066
FT                   /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial
FT                   extracellular solute-binding protein, score 28.8, E-value
FT                   1.3e-05"
FT                   /inference="protein motif:Pfam:PF01547"
FT   CDS_pept        complement(144441..145556)
FT                   /transl_table=11
FT                   /locus_tag="CBO0108"
FT                   /product="putative glycosyl transferase"
FT                   /note="Similar to Escherichia coli mannosyltransferase B
FT                   MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E():
FT                   2.5e-24, 30.58 38d in 291 aa, and to Clostridium tetani
FT                   mannosyltransferase ctc00268 SWALL:Q899B7 (EMBL:AE015936)
FT                   (374 aa) fasta scores: E(): 2.1e-77,55.94 38d in 370 aa"
FT                   /note="Also similar to the nearby CDS, CBO0113, (44.892
FT                   ide. in 372 aa overlap)"
FT                   /db_xref="GOA:A5HY05"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="InterPro:IPR028098"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY05"
FT                   /protein_id="CAL81664.1"
FT                   /translation="MNISIDGRGINWYKGTGIGTYTEKVLTNMIGKTTEDSFNIYWSGD
FT                   DYLKFKKHNTNIILTSKKHSKFFEQTYIPYDLNNINSDIYHIPQNGIGISENISCKIIV
FT                   TIHDLIPYIMPETVGKGYLNKFLKDMPRIIELSDKIITVSEWSKKDILKFFPMREDKIE
FT                   VIPLAADSKYRPLNKLYCKNILKKKYGINLPYILYLGGFSSRKNVDSIIKAFEKIYAKL
FT                   PQEHALVIVGSKKDEGEKLYEFSSKLKISSNIIFTDFVEEQDLPIFYNGCSVFIYPSLY
FT                   EGFGLPPLEAMSCGCAVIASNVTSIPEVTSDCCINIDPLDIDDMSNSIENILKNPDLKD
FT                   TLSKKAFERSMLFSWSKTAENTLNLYKSVLK"
FT   misc_feature    complement(144510..145013)
FT                   /note="Pfam match to entry PF00534 Glycos_transf_1,Glycosyl
FT                   transferases group 1, score 135.9, E-value 7.8e-38"
FT                   /inference="protein motif:Pfam:PF00534"
FT   CDS_pept        145722..146732
FT                   /transl_table=11
FT                   /locus_tag="CBO0109"
FT                   /product="spore coat protein"
FT                   /note="Similar to Bacillus subtilis spore coat protein S
FT                   CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa)
FT                   fasta scores: E(): 4.6e-06, 19.63 38d in 331 aa, and to
FT                   Clostridium acetobutylicum spore coat protein CotS related
FT                   cac2910 SWALL:Q97F43 (EMBL:AE007788) (335 aa) fasta scores:
FT                   E(): 3.8e-69, 52.25 38d in 333 aa"
FT                   /db_xref="GOA:A5HY06"
FT                   /db_xref="InterPro:IPR002575"
FT                   /db_xref="InterPro:IPR011009"
FT                   /db_xref="InterPro:IPR014255"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY06"
FT                   /protein_id="CAL81665.1"
FT                   /translation="MDKSEIISIVENNYNININSIEKIKNVYKIISDSNKTYAFKIIKY
FT                   EFNHFLFIISCMKHLQYNNFSKIPQIIPNNKGLDYIKIGDFYGYITEWIEGSRQCNYSN
FT                   PVEVMMAANKLGQLHEKSKNFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILNKNK
FT                   KSEFDNFYINILEDEIERADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSE
FT                   NQIYIIDFDYCMLDTKLHDLASILIRVMKNGKWDLKSAELILNSYRKESYIDKESIPII
FT                   AAFMEFPQDYWQIGIQHYWEKQPWSEEFFFNKLNRYHEDREERQEFIEKFRRINI"
FT   misc_feature    146340..146378
FT                   /note="PS00109 Tyrosine protein kinases specific
FT                   active-site signature."
FT                   /inference="protein motif:ProSite:PS00109"
FT   CDS_pept        146747..146941
FT                   /transl_table=11
FT                   /locus_tag="CBO0110"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY07"
FT                   /protein_id="CAL81666.1"
FT                   /translation="MSRKKKYYEDIKENMSELDKYEEELQELKKSVKKLKEIKKRKKKI
FT                   NKLKDEEKEVLKKIRKKYK"
FT   CDS_pept        146968..147735
FT                   /transl_table=11
FT                   /locus_tag="CBO0111"
FT                   /product="spore coat protein"
FT                   /note="Similar to Clostridium tetani putative spore coat
FT                   protein ctc00270 SWALL:Q899B5 (EMBL:AE015936) (256 aa)
FT                   fasta scores: E(): 1.2e-19, 35.84 38d in 226 aa, and to
FT                   Clostridium acetobutylicum spore coat protein CotS related
FT                   cac2909 SWALL:Q97F44 (EMBL:AE007788) (251 aa) fasta scores:
FT                   E(): 1.5e-18, 31.78 38d in 258 aa"
FT                   /db_xref="GOA:A5HY08"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY08"
FT                   /protein_id="CAL81667.1"
FT                   /translation="MDSLKKITDISHYLKSKDINIIKDFKDDNRELDNLSEELVIEQLR
FT                   IISLFHKNTLGNKSYIRGGIKNKTGSIVEKYKLDLKKINKYIRSLKDKEINNTDLEKLI
FT                   LDYMPNYINRAEKVIENIYENGYINLVWRSMDRKEICLGKTYFNNIRYNKGIEVIDINK
FT                   CSYNMVEMDCIELLYKVNKKNSSVDIERLCKIFCEFESLNDESYKFILYMLSYPYSLIK
FT                   CCTKYMKEKDSDKEKHYMDRFNKAMKLDSNSFV"
FT   CDS_pept        147748..148761
FT                   /transl_table=11
FT                   /locus_tag="CBO0112"
FT                   /product="spore coat protein"
FT                   /note="Similar to Bacillus subtilis spore coat protein S
FT                   CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa)
FT                   fasta scores: E(): 5.4e-11, 25.43 38d in 342 aa, and to
FT                   Clostridium acetobutylicum spore coat protein CotS related
FT                   cac2908 SWALL:Q97F45 (EMBL:AE007788) (344 aa) fasta scores:
FT                   E(): 6.1e-61, 49.84 38d in 331 aa. Also similar to CBO0114
FT                   (32.390 38d), CBO0109 (32.537) and to CBO0111 (21.756)."
FT                   /db_xref="GOA:A5HY09"
FT                   /db_xref="InterPro:IPR011009"
FT                   /db_xref="InterPro:IPR014255"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY09"
FT                   /protein_id="CAL81668.1"
FT                   /translation="MDKLNKNYLKKYNLSSDLFDQYDFIIKDIYPIRNVYIIDTSKGKK
FT                   ILKKVNYTVEELKFIEEIIDYIKIGFKRIMDFEKNIQGDIYTIYKGEMYCLMDLIDGRE
FT                   CQFSNPLDLKISSVALAQMHKASKGFTTNFNKRVLNGKSIEKFKIQKEEMNFFKKIANI
FT                   HKNKNEFDDLFLSEIDSYIDEISKSINILENSHYYDICKENDKISICHHDLAYHNILIK
FT                   EDEAYFIDFDYAILDLKVNDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEV
FT                   LYGLLSFPYDFYDISKNYYTKRKDWEDEVFLNRLIKKCNYKEDRKEFLKNFKDNIL"
FT   misc_feature    148372..148410
FT                   /note="PS00109 Tyrosine protein kinases specific
FT                   active-site signature."
FT                   /inference="protein motif:ProSite:PS00109"
FT   repeat_region   complement(148769..148955)
FT                   /note="intergenic repeat 1"
FT   CDS_pept        complement(149116..150243)
FT                   /transl_table=11
FT                   /locus_tag="CBO0113"
FT                   /product="putative glycosyl transferase"
FT                   /note="Similar to Escherichia coli mannosyltransferase B
FT                   MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E():
FT                   8.8e-32, 32.55 38d in 384 aa, and to Clostridium tetani
FT                   mannosyltransferase ctc00272 SWALL:Q899B3 (EMBL:AE015936)
FT                   (384 aa) fasta scores: E(): 1.5e-84,60.85 38d in 373 aa"
FT                   /note="Also similar to the nearby CDS, CBO0108, (44.892
FT                   ide. in 372 aa overlap)"
FT                   /db_xref="GOA:A5HY10"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="InterPro:IPR028098"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY10"
FT                   /protein_id="CAL81669.1"
FT                   /translation="MRIGIDGRPAYWYRGTGIGTYTYQLISSLNKVDKKNDYLIFNPEF
FT                   SNSPLKLNNNFNIKNINAHSPKNFWNEVNIPAILKNNSMDIYHVPQNGVGLPKNKNCKF
FT                   IITLHDVIPYRMPETVSDRYLKIFSEEIPKIVSSADGIITVSDFSKKDIMKSFNYPEDK
FT                   IFVTHLASEDIYMPLNKEFCRNILKMKYNINKNFILYVGGFSPRKNILGLIDAFYNLIN
FT                   IYKKDISLVIVGRKGKIYEKYIERVRELNMEDKVFFPGFISVKDLPYFYNCAEIFVYPS
FT                   FYEGFGLPPIEAMACGTPVITSNVTSIPEITKDAAMLINPYDTDSICKAMYTALSNENM
FT                   KNILIKRGLNRTSQLTWNNCAKSTLLAYKKILCSN"
FT   misc_feature    complement(149191..149694)
FT                   /note="Pfam match to entry PF00534 Glycos_transf_1,Glycosyl
FT                   transferases group 1, score 164.8, E-value 1.6e-46"
FT                   /inference="protein motif:Pfam:PF00534"
FT   CDS_pept        150360..151364
FT                   /transl_table=11
FT                   /locus_tag="CBO0114"
FT                   /product="spore coat protein"
FT                   /note="Similar to Bacillus subtilis YtaA protein
FT                   SWALL:O34656 (EMBL:Z99119) (357 aa) fasta scores: E():
FT                   1.3e-20, 28.1 38d in 306 aa, and to Clostridium tetani
FT                   spore coat protein ctc00273 SWALL:Q899B2 (EMBL:AE015936)
FT                   (337 aa) fasta scores: E(): 8.4e-95, 71.85 38d in 334 aa.
FT                   Also similar to CBO0112 (32.390 38d), CBO0109 (31.077)."
FT                   /db_xref="GOA:A5HY11"
FT                   /db_xref="InterPro:IPR011009"
FT                   /db_xref="InterPro:IPR014255"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY11"
FT                   /protein_id="CAL81670.1"
FT                   /translation="MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQK
FT                   LLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLI
FT                   SAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFD
FT                   LSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNDTINV
FT                   IDFDYCKREIKTYDISNFMIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLL
FT                   FPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE"
FT   misc_feature    150963..151001
FT                   /note="PS00109 Tyrosine protein kinases specific
FT                   active-site signature."
FT                   /inference="protein motif:ProSite:PS00109"
FT   CDS_pept        151488..152390
FT                   /transl_table=11
FT                   /locus_tag="CBO0115"
FT                   /product="probable peptidase"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00279 SWALL:Q899A6 (EMBL:AE015936) (300 aa) fasta
FT                   scores: E(): 3.5e-69, 65.21 38d in 299 aa, and to
FT                   Clostridium acetobutylicum uncharacterized protein, yabg
FT                   b.subtilis ortholog cac2905 SWALL:Q97F48 (EMBL:AE007788)
FT                   (300 aa) fasta scores: E(): 8.1e-69, 61.79 38d in 301 aa"
FT                   /db_xref="InterPro:IPR008764"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY12"
FT                   /protein_id="CAL81671.1"
FT                   /translation="MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADS
FT                   PYEDLEEVSVATMTKKEEVFTSKVNDSIKKILDDRKFRGGDKGKHLNKKSKIEKMYRTN
FT                   KNIKTKELYFGRPGKILHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILSLVK
FT                   LYKPDIVVITGHDAVLKEAENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQ
FT                   SCYEAILDAGANYASSPGRVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGI
FT                   GGLQTRGKYREGFPKSEYV"
FT   misc_feature    151488..152384
FT                   /note="Pfam match to entry PF05582 Peptidase_U57, YabG
FT                   peptidase U57, score 596.9, E-value 1.3e-176"
FT                   /inference="protein motif:Pfam:PF05582"
FT   CDS_pept        152586..152822
FT                   /transl_table=11
FT                   /locus_tag="CBO0116"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus subtilis Veg protein or bsu00440
FT                   SWALL:VEG_BACSU (SWALL:P37466) (86 aa) fasta scores: E():
FT                   5.9e-12, 52.77 38d in 72 aa, and to Clostridium
FT                   acetobutylicum uncharacterized protein, Veg b.subtilis
FT                   ortholog cac2904 SWALL:Q97F49 (EMBL:AE007788) (78 aa) fasta
FT                   scores: E(): 3.2e-18, 69.73 38d in 76 aa"
FT                   /db_xref="GOA:A5HY13"
FT                   /db_xref="InterPro:IPR009366"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY13"
FT                   /protein_id="CAL81672.1"
FT                   /translation="MERKNVIANIKRDIESHVGERVTLKANGGRRKTFVNEGVLEEAYP
FT                   SIFVIRLEDDTQRKVTYSYSDVLTKTVQLDFVL"
FT   misc_feature    152604..152819
FT                   /note="Pfam match to entry PF06257 DUF1021, Protein of
FT                   unknown function (DUF1021), score 143.9, E-value 3e-40"
FT                   /inference="protein motif:Pfam:PF06257"
FT   CDS_pept        152927..154489
FT                   /transl_table=11
FT                   /locus_tag="CBO0117"
FT                   /product="putative peptidoglycan binding protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00280 SWALL:Q899A5 (EMBL:AE015936) (520 aa) fasta
FT                   scores: E(): 8e-105, 53.07 38d in 520 aa, and to
FT                   Clostridium acetobutylicum lysm domain containing membrane
FT                   protein cac2903 SWALL:Q97F50 (EMBL:AE007787) (520 aa) fasta
FT                   scores: E(): 1.9e-86, 45.76 38d in 520 aa"
FT                   /db_xref="InterPro:IPR018392"
FT                   /db_xref="InterPro:IPR024300"
FT                   /db_xref="InterPro:IPR036779"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY14"
FT                   /protein_id="CAL81673.1"
FT                   /translation="MDLNLLKENIECEQLLGENFVNTPVKGEYVIPDTHPDVYEVLMLD
FT                   AKPYITSKEVMQDKLYMEGYIDYNILYLAKEEEKGVLYNTRYSSKFSNDIQISGTEKDM
FT                   LCEAECFVEDMYCKIVNERKISIEGIVRLKGAVYKKYNFEIIKDLDALQDIQMLRNPIS
FT                   IDKIAGTATGELLVKTSVKIGADKPEIGSILKTNLNIHKKKITVLDDKVNVEAFAKIEL
FT                   IYRAKESRDICYVVDDIFIDKEVELKGVNSFMESYTDFTVDGINTEPKEDDLGESRIID
FT                   VEALVKSNTRVMYKKEIEVIEDMYSPNMLLNMNKEDYELNVMQGHSKNESIVKENIEIA
FT                   SSMPSIREIIMTEGKAYITEKKIVEDKVVVEGILNAEVMYKTTEDGKYIYNLKEDIPFS
FT                   CAVDIPGAKIDMQCMTKVVLEDVEANIEANTVAVKALIEVYSRVNYTSHKEFLVNVEPM
FT                   EEEVPEKKSSITIYVVQQGDTLWKIAKRYYTTVDNLVLINEIDNPDVIKPGQKLIIPGK
FT                   AII"
FT   misc_feature    154340..154471
FT                   /note="Pfam match to entry PF01476 LysM, LysM domain,score
FT                   73.5, E-value 4.7e-19"
FT                   /inference="protein motif:Pfam:PF01476"
FT   repeat_region   154634..154692
FT   repeat_region   complement(154634..154724)
FT                   /note="intergenic repeat 1"
FT   CDS_pept        154869..155669
FT                   /transl_table=11
FT                   /gene="cphB"
FT                   /locus_tag="CBO0119"
FT                   /product="cyanophycinase"
FT                   /note="Similar to Synechococcus elongatus cyanophycinase
FT                   CphB or tlr2169 SWALL:CPHB_SYNEL (SWALL:Q9F2I8) (322 aa)
FT                   fasta scores: E(): 3.5e-32, 38.28 38d in 256 aa, and to
FT                   Clostridium tetani cyanophycinase ctc00281 SWALL:Q899A4
FT                   (EMBL:AE015936) (268 aa) fasta scores: E(): 8e-68, 69.58 id
FT                   in 263 aa"
FT                   /db_xref="GOA:A5HY15"
FT                   /db_xref="InterPro:IPR005320"
FT                   /db_xref="InterPro:IPR011811"
FT                   /db_xref="InterPro:IPR029062"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY15"
FT                   /protein_id="CAL81674.1"
FT                   /translation="MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVA
FT                   SELPEELGEEYTNIFKNLGVKNVKILNINNRKDTHYEGNVNLIKNASLIFFTGGDQLRI
FT                   TSLLGGTPLYRALERAYKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAPGLS
FT                   LIRGVIIDQHFAQRGRIGRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYI
FT                   IDGTEISGTNVSEQYPDEILSIFDVKLHVLKNRDKFDLNYRRPI"
FT   misc_feature    155010..155666
FT                   /note="Pfam match to entry PF03575 Peptidase_S51,Peptidase
FT                   family S51, score 244.5, E-value 1.6e-70"
FT                   /inference="protein motif:Pfam:PF03575"
FT   CDS_pept        155713..158334
FT                   /transl_table=11
FT                   /gene="cphA"
FT                   /locus_tag="CBO0120"
FT                   /product="cyanophycin synthetase"
FT                   /EC_number="6.-.-.-"
FT                   /note="Similar to Anabaena variabilis cyanophycin
FT                   synthetase CphA SWALL:CPHA_ANAVA (SWALL:O86109) (901 aa)
FT                   fasta scores: E(): 5.5e-116, 39.86 38d in 868 aa, and to
FT                   Clostridium tetani cyanophycin synthetase ctc00282
FT                   SWALL:Q899A3 (EMBL:AE015936) (874 aa) fasta scores: E():
FT                   3e-189, 57.98 38d in 864 aa"
FT                   /db_xref="GOA:A5HY16"
FT                   /db_xref="InterPro:IPR004101"
FT                   /db_xref="InterPro:IPR011761"
FT                   /db_xref="InterPro:IPR011810"
FT                   /db_xref="InterPro:IPR013221"
FT                   /db_xref="InterPro:IPR013651"
FT                   /db_xref="InterPro:IPR013815"
FT                   /db_xref="InterPro:IPR018109"
FT                   /db_xref="InterPro:IPR036565"
FT                   /db_xref="InterPro:IPR036615"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY16"
FT                   /protein_id="CAL81675.1"
FT                   /translation="MKIENIRVFEGRNIYSHKKCIRMDVDLEGYSNISSKEIQEFNKTL
FT                   LNYVPELREHCCCVGKKGGFVERLYEGTYLSHICEHVIIALQNRIGIDVSYGKAREIEG
FT                   EKYYIIYQYKYKNMAIECGKIAVDLINNIINGKRYNIKTKTRELVCLLKTEELGPSTLS
FT                   IIQEAKKRNIPVTKIGEDSMFQLGYGIKGKTIEATICNSTSAVSVDIACDKLLSKNILM
FT                   DQCIPVAEGYKVKNYIDLLFKAEKLGYPVVLKPRFGNQGKGVVVNIKNQKELVNAYSIV
FT                   NKKFQDIMIEKYINGKDYRACVVDGKVVAVAQRIPPYIIGNGKSTIYELIKELNRDERR
FT                   GDGHEKPLTKVKIDKDLKNNINKEGYTLGYILPEEYKLELRHNANLSTGGVAIDCTDLI
FT                   CTETREVCERAAKAIGLNICGIDICCSDISKPLKENEGIMEVNAAPGIRMHQYPYKGKS
FT                   RNVAKAIVDMMFKEYDGNIPIISITGTNGKTTTTRLIAHILSFSGKKVGMTTTGGIYIN
FT                   NKCINKGDTTGYYSAKTVLTNKEAEVAVLELARGGLIRDGLPYDLADVGIITNVTEDHL
FT                   GLGGINTLEDMAYVKALVGEAIKKDGYVVINADDEASISIINRMKSKIILFTKNKNNPI
FT                   ISQYLDNKNLVLYLDEDTIYLKKLNKNEEIINVNKIPITLGGKLIYNVENAMAAIAALI
FT                   ALGIDVNTIRQGLESFSNEEQNPGRFNMYNVHGTNVILDYGHNIEGYKVVLESIKKIKH
FT                   KRIIGVVGVPGDRTNSSTLKVGNICGENFDYVYIKEDRDKRGRKHGEIADLLKKGILET
FT                   GFKNSKLNIILDEEEALKKAIEFSNPGDLVIMFFEEFEPAENIVKDKIKKGKITKRETA
FT                   LA"
FT   misc_feature    156271..156294
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    156952..157824
FT                   /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase
FT                   family, catalytic domain, score 126.5, E-value 5.2e-35"
FT                   /inference="protein motif:Pfam:PF01225"
FT   misc_feature    157150..157221
FT                   /note="PS01011 Folylpolyglutamate synthase signature 1."
FT                   /inference="protein motif:ProSite:PS01011"
FT   misc_feature    157858..158124
FT                   /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase
FT                   family, glutamate ligase domain, score 46.8,E-value
FT                   5.1e-11"
FT                   /inference="protein motif:Pfam:PF02875"
FT   CDS_pept        158427..159269
FT                   /transl_table=11
FT                   /gene="ispE"
FT                   /gene_synonym="ipk"
FT                   /locus_tag="CBO0121"
FT                   /product="4-diphosphocytidyl-2-c-methyl-D-erythritol
FT                   kinase"
FT                   /EC_number="2.7.1.148"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
FT                   IspE or Ipk or b1208 or z1979 or ecs1713 SWALL:ISPE_ECOLI
FT                   (SWALL:P24209) (283 aa) fasta scores: E(): 2.2e-13, 32.44
FT                   id in 262 aa, and to Clostridium perfringens
FT                   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE or
FT                   Ipk or cpe2212 SWALL:ISPE_CLOPE (SWALL:Q8XIA9) (288 aa)
FT                   fasta scores: E(): 2e-59, 61.48 38d in 283 aa"
FT                   /db_xref="GOA:A5HY17"
FT                   /db_xref="InterPro:IPR004424"
FT                   /db_xref="InterPro:IPR006204"
FT                   /db_xref="InterPro:IPR013750"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="InterPro:IPR020568"
FT                   /db_xref="InterPro:IPR036554"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY17"
FT                   /protein_id="CAL81676.1"
FT                   /translation="MLSKAHAKINLSLDVIGKRKDGYHLLKMLMQTIDLYDLIEIKKIK
FT                   KDIIIDCDREYIPKDRRNLAYKAATLFLDRYNIDSGVRINITKNIPVAAGLAGGSTDAA
FT                   TVLKIMRDIFEPDISNEELKEIALDIGADVPFCIEGGTALCEGIGEKITPIKNFKNHIL
FT                   VLVKPNFGLSTKDVYNNLKVEKIYIHPNTTKLIQSIEEDNLKSVARNMRNVLENVTLRK
FT                   YKALNSIKSNFIELGALGSMMSGSGPSVFGLFDDMLKAQICYDNMREKYKEVFITRTI"
FT   misc_feature    158667..159266
FT                   /note="Pfam match to entry PF00288 GHMP_kinases, GHMP
FT                   kinases putative ATP-binding protein, score 107.5, E-value
FT                   2.8e-29"
FT                   /inference="protein motif:Pfam:PF00288"
FT   CDS_pept        159435..159632
FT                   /transl_table=11
FT                   /locus_tag="CBO0122"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   hypothetical protein Tte2556 tte2556 SWALL:Q8R768
FT                   (EMBL:AE013196) (80 aa) fasta scores: E(): 1.3, 32.75 38d
FT                   in 58 aa"
FT                   /db_xref="GOA:A5HY18"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY18"
FT                   /protein_id="CAL81677.1"
FT                   /translation="MGRIIGIFDKYFLILMLIEGGITMFMDAPSFKKSNMMKSYKQARW
FT                   IGIFIITISLILYILQRILF"
FT   misc_feature    order(159465..159518,159561..159614)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0122 by TMHMM2.0 at aa 11-28 and 43-60"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        159692..161212
FT                   /transl_table=11
FT                   /locus_tag="CBO0123"
FT                   /product="spore germination protein"
FT                   /note="Similar to Bacillus cereus spore germination protein
FT                   GerlA SWALL:Q93N70 (EMBL:AF387344) (492 aa) fasta scores:
FT                   E(): 7.4e-71, 40.43 38d in 502 aa, and to Clostridium
FT                   tetani spore germination protein b1 ctc00285 SWALL:Q899A1
FT                   (EMBL:AE015936) (492 aa) fasta scores: E(): 3.1e-111, 64.34
FT                   38d in 502 aa"
FT                   /db_xref="GOA:A5HY19"
FT                   /db_xref="InterPro:IPR004995"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY19"
FT                   /protein_id="CAL81678.1"
FT                   /translation="MKEVVNDEISKSIDENIKYIKELLEGNSDMVFREFLIGDKKAFIM
FT                   YIDGMADKDLLNDYVLESLMLESEKLGNISDIKNRISNKRYESNDKCNVNDIKNKILTV
FT                   TDVSEKDKLSKAIDLVLSGDTLLLIEGMDKAYVIATRLWPVRGVGEPESETTIKGSRDG
FT                   FTETIRFNTALVRRRIKDTRLKIKSKTLGVRSKTDMAIIYIEDIVNQDVLNNIYDRLEK
FT                   IDIDAILGSGYIEHLIEDGKWSLFPTTRSTERPDVVASALYEGKVAILVDNSPFAIIVP
FT                   TTLPSLFQSPDDYYEKWIHSSIIRIIRLFSIIISIILPSMYVAVTSYHSDIIPTKLAYF
FT                   IAASREGVPFPAYMEALIMEFSLAFLMESIIRLPKPIGATIGIVGGLIIGQAAVSAGIV
FT                   SPIMIIIVSITTITSFTAPSYDASLSFRIIRFLLIIAASFLGLYGIILGLIVLLIHLVR
FT                   LKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTRDKIRQR"
FT   misc_feature    159692..161185
FT                   /note="Pfam match to entry PF03323
FT                   GerA,Bacillus/Clostridium GerA spore germination protein,
FT                   score 714.1, E-value 6.6e-212"
FT                   /inference="protein motif:Pfam:PF03323"
FT   misc_feature    order(160607..160675,160799..160858,160871..160939,
FT                   160982..161050)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0123 by TMHMM2.0 at aa 306-328, 370-389, 394-416 and
FT                   431-453"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        161232..162329
FT                   /transl_table=11
FT                   /locus_tag="CBO0124"
FT                   /product="spore germination protein"
FT                   /note="Similar to Bacillus subtilis spore germination
FT                   protein A2 GerAb or GerA2 or bsu33060 SWALL:GRAB_BACSU
FT                   (SWALL:P07869) (365 aa) fasta scores: E(): 4.9e-24, 27.92
FT                   id in 351 aa, and to Clostridium tetani spore germination
FT                   protein A2 ctc00286 SWALL:Q899A0 (EMBL:AE015936) (369 aa)
FT                   fasta scores: E(): 1.3e-72, 50.13 38d in 363 aa"
FT                   /db_xref="GOA:A5HY20"
FT                   /db_xref="InterPro:IPR004761"
FT                   /db_xref="InterPro:IPR034804"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY20"
FT                   /protein_id="CAL81679.1"
FT                   /translation="MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLANIVGNDGWIVI
FT                   IISALINFGLIYIMYLIIKFNNYNEFYKIVNDNFGKYLGKIIVLSFIIYNVIYISNGLR
FT                   VFVEEIKLYLLEKTPTEFLIIISVIVASYLIRGEVDTLVKFNEVVFWFSFIPVIFVLLF
FT                   AFYQGDFTNLLPVLQNKPSSYITATWATINRFKGIEIIFLLLPFMKKKNKTSKILFNSL
FT                   FFIGIFYILVVILSVTMFSTEQVKLMLWPGITMIKSIDIPGTFIERWEGIIMAIWTLFF
FT                   FTTFTNIYYFSADILKDMLHIEDIKISSLFIMPFVYIIALYPENVVEVIDVGKNLMPIL
FT                   FIINMVVIPIILFLISKSKLSKRKR"
FT   sig_peptide     161232..161319
FT                   /locus_tag="CBO0124"
FT                   /note="probabilty 0.863, with cleavage site probability
FT                   0.642 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    161250..162218
FT                   /note="Pfam match to entry PF03845 Spore_permease, Spore
FT                   germination protein, score 160.8, E-value 2.4e-45"
FT                   /inference="protein motif:Pfam:PF03845"
FT   misc_feature    order(161253..161321,161358..161426,161487..161555,
FT                   161583..161636,161673..161741,161784..161852,
FT                   161886..161954,162042..162110,162144..162197,
FT                   162240..162299)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0124 by TMHMM2.0 at aa 7-29, 42-64, 85-107,
FT                   117-134,147-169, 184-206, 218-240, 270-292, 304-321 and
FT                   336-355"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        162379..163560
FT                   /transl_table=11
FT                   /locus_tag="CBO0125"
FT                   /product="spore germination protein"
FT                   /note="Similar to Bacillus cereus spore germination protein
FT                   GerlC SWALL:Q93N68 (EMBL:AF387344) (390 aa) fasta scores:
FT                   E(): 1.8e-14, 27.36 38d in 402 aa, and to Clostridium
FT                   tetani spore germination protein A3 ctc00287 SWALL:Q898Z9
FT                   (EMBL:AE015936) (394 aa) fasta scores: E(): 1.6e-56, 37.72
FT                   38d in 395 aa"
FT                   /db_xref="GOA:A5HY21"
FT                   /db_xref="InterPro:IPR008844"
FT                   /db_xref="InterPro:IPR038501"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY21"
FT                   /protein_id="CAL81680.1"
FT                   /translation="MKSKKCLAIILILSTICMTGCWDKIEINERAFASVLGVDAGKDIG
FT                   KEKQLKEISESASFTGSKFDKIKVTYAFPDISKLGPEKGGTAVDNTMSVDAYSMQNSIN
FT                   EVINKSSRTLSFGHLKLIVLNTSILDYSNTFKEVIDYLQRQPAINRTIYIVFSEDKSEE
FT                   ILKFKPNMEKSIENYIIGILENNKKSNTSFPLTLNEFLEKTGQNNITLMPVINIDKENK
FT                   DLKISKVAVIKNDKIKGYISTEQANSIQLINKRFKGGTRTIIRDGSPLDYSIENNERKI
FT                   NIKDKKKLSVDIKLNLEGQIKGYNIDKQISSNEENIKKIESNLDKAITQDIKEVIRISQ
FT                   TEYNTDILDLGEFIHKYHPKLWKEIKGDWNQLYKTVDINVSVDTKVRRIGGIK"
FT   sig_peptide     162379..162475
FT                   /locus_tag="CBO0125"
FT                   /note="probabilty 0.904, with cleavage site probability
FT                   0.719 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    163054..163557
FT                   /note="Pfam match to entry PF05504 Spore_GerAC, Spore
FT                   germination B3/ GerAC like, C-terminal, score 120.7,E-value
FT                   2.8e-33"
FT                   /inference="protein motif:Pfam:PF05504"
FT   CDS_pept        163633..164265
FT                   /transl_table=11
FT                   /locus_tag="CBO0126"
FT                   /product="stage II sporulation protein"
FT                   /note="Similar to Bacillus subtilis stage II sporulation
FT                   protein R SpoIIR or Ipc-27d or bsu36970 SWALL:SP2R_BACSU
FT                   (SWALL:P39151) (224 aa) fasta scores: E(): 1.9e-18, 35.71
FT                   id in 224 aa, and to Clostridium perfringens stage II
FT                   sporulation protein R SpoIIR or cpe2211 SWALL:Q8XIB0
FT                   (EMBL:AP003193) (209 aa) fasta scores: E(): 1.5e-37,55.34
FT                   38d in 206 aa"
FT                   /db_xref="InterPro:IPR014202"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY22"
FT                   /protein_id="CAL81681.1"
FT                   /translation="MKKILVFMLSIIVVFFISFKSFNLFHKSTSVEQKDISNKIIRFHV
FT                   LANSDSIEDQGLKLKVKDEIIKYMMPKLDKSSSIDESRKILKENDKEIKKIAENIINKN
FT                   GYKYSVNTYLGQDQFPIKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFVDVT
FT                   KGEVSTKKTEQKMKKVLKEEELKCINNSKNSYEIKFKVVEKINKLKR"
FT   sig_peptide     163633..163723
FT                   /locus_tag="CBO0126"
FT                   /note="probabilty 0.963, with cleavage site probability
FT                   0.440 between residues 31 and 32"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(164302..165543)
FT                   /transl_table=11
FT                   /locus_tag="CBO0127"
FT                   /product="putative cell wall synthesis protein"
FT                   /note="Similar to Clostridium tetani 1,2-diacylglycerol
FT                   3-glucosyltransferase ctc00289 SWALL:Q898Z7 (EMBL:AE015936)
FT                   (389 aa) fasta scores: E(): 1.7e-81,59.38 38d in 389 aa,
FT                   and to Clostridium acetobutylicum predicted
FT                   udp-glucuronosyltransferase, ypfp b/subtilis ortholog
FT                   cac2897 SWALL:Q97F56 (EMBL:AE007787) (384 aa) fasta scores:
FT                   E(): 4.3e-80, 59.53 38d in 383 aa"
FT                   /db_xref="GOA:A5HY23"
FT                   /db_xref="InterPro:IPR007235"
FT                   /db_xref="InterPro:IPR009695"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY23"
FT                   /protein_id="CAL81682.1"
FT                   /translation="MKILILSVSAGGGHIHAAEALKSYIKLNNNKAEITVIDTLKYINP
FT                   LIDKVIIGSYLKTLKVTPSLFGKLYDHSEDDEGLATVISSNLSKIMTYKLSHLVNELNP
FT                   DIIICTHPFPAEMISIMKDKGKLNIPSLTILTDYAPHSFWIQEHTDAYVVSNSDMIDEM
FT                   VARNVPKNKIFDFGIPVNPSFLKKYDKEKTLKELDLNINIPTFLIMGGSLGIGKISDLY
FT                   SELIKIDQNMQIIIITGNNKKLYSELNKLKENSNKETRIIGFTDKVNKYMQCCDLLLTK
FT                   PGGLTITEALVSNIPMAVFSPIPGQEEKNAKFLLRHNLAISIDSIEDTKDIISDLLKSE
FT                   SSLKTMSLNCNKFAKPNCGNDIYNLLEFLISIKKNDSSKNKMYVSNPVISHKSKNLFKS
FT                   IEKYFIKTAEKFLL"
FT   CDS_pept        165916..167286
FT                   /transl_table=11
FT                   /locus_tag="CBO0128"
FT                   /product="sporulation protein"
FT                   /note="Similar to Bacillus subtilis sporulation protein
FT                   YpeB or JoeB or bsu22920 SWALL:YPEB_BACSU (SWALL:P38490)
FT                   (450 aa) fasta scores: E(): 1e-27, 26.57 38d in 444 aa,and
FT                   to Clostridium tetani conserved membrane-associated protein
FT                   ctc00290 SWALL:Q898Z6 (EMBL:AE015936) (455 aa) fasta
FT                   scores: E(): 2.7e-92, 57.54 38d in 457 aa"
FT                   /db_xref="GOA:A5HY24"
FT                   /db_xref="InterPro:IPR014239"
FT                   /db_xref="InterPro:IPR025711"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY24"
FT                   /protein_id="CAL81683.1"
FT                   /translation="MKKSTRRIVYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSK
FT                   SLHELITSVQNIRVNLSKASIIGSRDQEIVTFEEIFKYSSMANDKLHSLPIDQNTIANT
FT                   SKFLSQVGDFSNSLGKSIVKNNNLSKKDYENIERLKKESLQLENQLNNVVTDINEGRVK
FT                   WGDIRKKVGGVLAKENPNSVKGQFNNMQKQVMQYPALIYDGPFSDNTLKITPKVNSEKN
FT                   ISESQAQKIAENIIGKDKIKAIKLDTNEGKTNIGTYRFIADIKGRDNKNGNVTCEISKH
FT                   GGKLVYLIDSRSIGQPKIDSKKAKSIGNNYLKKLKISNMVPTYTLNYENVAVINYVYKQ
FT                   DDVIVYPDQIKLKIALDTGEIIGVDSQKYLIAHHDRDINKNIKVSQKEAQKKVGKNLNI
FT                   TNIRLSIIPTEANTEVLCYEFSGTYKNDKFKMFINANTGYEERILQILDTPNGELTI"
FT   sig_peptide     165916..166009
FT                   /locus_tag="CBO0128"
FT                   /note="probabilty 0.995, with cleavage site probability
FT                   0.621 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        167389..168369
FT                   /transl_table=11
FT                   /locus_tag="CBO0129"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00292 SWALL:Q898Z4 (EMBL:AE015936) (326 aa) fasta
FT                   scores: E(): 7.2e-89, 71.77 38d in 326 aa, and to
FT                   Clostridium perfringens hypothetical protein Cpe2210
FT                   cpe2210 SWALL:Q8XIB1 (EMBL:AP003193) (326 aa) fasta scores:
FT                   E(): 1.1e-78, 67.79 38d in 326 aa"
FT                   /db_xref="GOA:A5HY25"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR020536"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY25"
FT                   /protein_id="CAL81684.1"
FT                   /translation="MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAER
FT                   MTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFI
FT                   ITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNI
FT                   SGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYG
FT                   RHFRISENCKIISTRTKEEGDIIKNYLDSKDYMLLACDYNGSTVIIIGEPNKDDIKLAA
FT                   EITGRYSKGKDEDEIKVKYGKVNTDLNNIIKVKPASDDYLKKFII"
FT   misc_feature    167629..167646
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00190"
FT   CDS_pept        168394..168822
FT                   /transl_table=11
FT                   /locus_tag="CBO0130"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00293 SWALL:Q898Z3 (EMBL:AE015936) (143 aa) fasta
FT                   scores: E(): 1.5e-24, 54.22 38d in 142 aa, and to
FT                   Clostridium acetobutylicum uncharacterized protein, ywib
FT                   b.subtilis homolog cac2894 SWALL:Q97F59 (EMBL:AE007787)
FT                   (137 aa) fasta scores: E(): 1.7e-20, 52.55 38d in 137 aa"
FT                   /db_xref="InterPro:IPR012674"
FT                   /db_xref="InterPro:IPR015231"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY26"
FT                   /protein_id="CAL81685.1"
FT                   /translation="MKKKALIHVLSSIPDVKEKDDSIEVVTPGNFYKKDKNYYAVYEET
FT                   AISGMEGTTTTLKIGEKNFSLIRMGNTSTKMDFTLNKKSMSMYSTPYGTLEININTKKL
FT                   DINIDDNGGSIYIDYILGVEGQKPQNTILSINISPEKK"
FT   CDS_pept        168954..169253
FT                   /transl_table=11
FT                   /locus_tag="CBO0131"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani hypothetical protein
FT                   ctc00294 SWALL:Q898Z2 (EMBL:AE015936) (113 aa) fasta
FT                   scores: E(): 3.3e-15, 49 38d in 100 aa, and to Clostridium
FT                   acetobutylicum hypothetical protein Cac2893 SWALL:Q97F60
FT                   (EMBL:AE007787) (95 aa) fasta scores: E(): 1.9e-09, 36.66
FT                   id in 90 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY27"
FT                   /protein_id="CAL81686.1"
FT                   /translation="MNYFTNSKYENIIKLLCKYKGLSEYEIIKIMGDNECRYLLFLLLR
FT                   KYNCIEIENLKKDFNINDYEGICNNIEEAEKKLLLNKKIRDMFFEAGEILDNIK"
FT   CDS_pept        169487..171088
FT                   /transl_table=11
FT                   /gene="pyrG"
FT                   /locus_tag="CBO0132"
FT                   /product="CTP synthase"
FT                   /EC_number="6.3.4.2"
FT                   /note="Similar to Lactococcus lactis CTP synthase PyrG
FT                   SWALL:PYRG_LACLC (SWALL:O87761) (535 aa) fasta scores: E():
FT                   1.1e-123, 59.39 38d in 532 aa, and to Clostridium
FT                   acetobutylicum CTP synthase PyrG or cac2892
FT                   SWALL:PYRG_CLOAB (SWALL:Q97F61) (535 aa) fasta scores: E():
FT                   3.9e-165, 79.88 38d in 527 aa"
FT                   /db_xref="GOA:A5HY28"
FT                   /db_xref="InterPro:IPR004468"
FT                   /db_xref="InterPro:IPR017456"
FT                   /db_xref="InterPro:IPR017926"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR029062"
FT                   /db_xref="InterPro:IPR033828"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY28"
FT                   /protein_id="CAL81687.1"
FT                   /translation="MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYI
FT                   NIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDENLSQNNNVTTGKIYWSVISKER
FT                   KGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIK
FT                   YEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEEL
FT                   KGKIGLFCNVDKEDVIQNLDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISM
FT                   VNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYANDTKVNIKWINSEEVNENNF
FT                   EQYLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNY
FT                   KGAHSAEIDPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYE
FT                   RHRHRYEFNNEYRSKLTEAGLILSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNK
FT                   PHPLFKDFVKATLDKK"
FT   misc_feature    170390..171070
FT                   /note="Pfam match to entry PF00117 GATase, Glutamine
FT                   amidotransferase class-I, score 280.0, E-value 3.3e-81"
FT                   /inference="protein motif:Pfam:PF00117"
FT   misc_feature    170615..170650
FT                   /note="PS00442 Glutamine amidotransferases class-I active
FT                   site."
FT                   /inference="protein motif:ProSite:PS00442"
FT   repeat_region   171176..171363
FT                   /note="intergenic repeat 1"
FT   CDS_pept        171527..171880
FT                   /transl_table=11
FT                   /locus_tag="CBO0133"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani hypothetical protein
FT                   ctc00295 SWALL:Q898Z1 (EMBL:AE015936) (120 aa) fasta
FT                   scores: E(): 3.3e-08, 32.45 38d in 114 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY29"
FT                   /protein_id="CAL81688.1"
FT                   /translation="MGPMIIQTELGIAIKNTFGKYELIDFSLFNTSKINEYELGLTINK
FT                   SNKGSITITAKCHICNNIHKYNYNIDEFLKREIIVGGCEILGIPLFYIGNKSTIEERVY
FT                   KQNQIFDKIYMMV"
FT   CDS_pept        172052..173497
FT                   /transl_table=11
FT                   /gene="rho"
FT                   /locus_tag="CBO0134"
FT                   /product="transcription termination factor Rho"
FT                   /note="Similar to Bacillus subtilis transcription
FT                   termination factor Rho or bsu37080 SWALL:RHO_BACSU
FT                   (SWALL:Q03222) (427 aa) fasta scores: E(): 4.3e-71, 56.89
FT                   id in 406 aa, and to Clostridium tetani transcription
FT                   termination factor Rho ctc00296 SWALL:Q898Z0
FT                   (EMBL:AE015936) (499 aa) fasta scores: E(): 2.9e-119,74.38
FT                   38d in 488 aa"
FT                   /db_xref="GOA:A5HY30"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR004665"
FT                   /db_xref="InterPro:IPR011112"
FT                   /db_xref="InterPro:IPR011113"
FT                   /db_xref="InterPro:IPR011129"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR036269"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY30"
FT                   /protein_id="CAL81689.1"
FT                   /translation="MINKDYESMTVKELREIAKKLDIKNISKFKKNELIEEIKTSKSTA
FT                   IEKDGKILVEKISPKIIKSENNIHSKITKENGINEEKTSSLMKNNEENKAERLKEMINE
FT                   SQRAKGVLEIIENNNYGFLRGQNYLSGPEDIYISPSQIRRFNLRTGDEVEGKVRIPKDG
FT                   EKFKALIYVERVNGENPEKAVGRKPFESLVPIYPNERIKLETNSQDLSTRLMDIISPIG
FT                   KGQRGMIVAPPKAGKTTLLKKIAQSISRNNPLCKLIVLLIDERPEEVTDMQRSIKGEVI
FT                   YSTFDEEPEHHTKVTYMVLERAKRMVEQGQDVVILLDSITRLSRAYNLTITPTGRTLSG
FT                   GLDPGALVMPKKFFGAARNIENGGSLTILATALTETGSRMDDMIFEEFKGTGNMEVHLN
FT                   RKLQERRIFPALDIYKSGTRRDDLLFTDSLEKETAFNIRKLLYEENNVENVTEQVLSIL
FT                   SKTKTNEEFVNIISKMDMNKNNR"
FT   misc_feature    172742..172765
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    172811..173323
FT                   /note="Pfam match to entry PF00006 ATP-synt_ab, ATP
FT                   synthase alpha/beta family, nucleotide-binding domain,score
FT                   106.3, E-value 6.2e-29"
FT                   /inference="protein motif:Pfam:PF00006"
FT   CDS_pept        complement(173537..173755)
FT                   /transl_table=11
FT                   /gene="rpmE"
FT                   /locus_tag="CBO0135"
FT                   /product="50S ribosomal protein L31"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 50S ribosomal protein L31 RpmE or b3936 or z5484 or
FT                   ecs4863 SWALL:RL31_ECOLI (SWALL:P02432) (70 aa) fasta
FT                   scores: E(): 6.4e-12, 50.74 38d in 67 aa, and to
FT                   Clostridium perfringens 50S ribosomal protein L31 RpmE or
FT                   cpe2205 SWALL:RL31_CLOPE (SWALL:Q8XIB6) (68 aa) fasta
FT                   scores: E(): 5.7e-23, 85.07 38d in 67 aa"
FT                   /db_xref="GOA:A5HY31"
FT                   /db_xref="InterPro:IPR002150"
FT                   /db_xref="InterPro:IPR027491"
FT                   /db_xref="InterPro:IPR034704"
FT                   /db_xref="InterPro:IPR042105"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY31"
FT                   /protein_id="CAL81690.1"
FT                   /translation="MREGIHPEYNHDVVVKCACGNTFTTGSTNKELKVEICSKCHPFFT
FT                   GKQKIVDAGGRVDKFMKKFNLSNEDVK"
FT   misc_feature    complement(173555..173755)
FT                   /note="Pfam match to entry PF01197 Ribosomal_L31,Ribosomal
FT                   protein L31, score 144.8, E-value 1.6e-40"
FT                   /inference="protein motif:Pfam:PF01197"
FT   misc_feature    complement(173579..173635)
FT                   /note="PS01143 Ribosomal protein L31 signature."
FT                   /inference="protein motif:ProSite:PS01143"
FT   misc_feature    complement(173630..173647)
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00190"
FT   CDS_pept        173982..174557
FT                   /transl_table=11
FT                   /gene="tdK"
FT                   /locus_tag="CBO0136"
FT                   /product="thymidine kinase"
FT                   /EC_number="2.7.1.21"
FT                   /note="Similar to Rhodothermus sp. thymidine kinase Tdk
FT                   SWALL:KITH_RHOSI (SWALL:Q9ZIG2) (213 aa) fasta scores: E():
FT                   2.6e-34, 53.26 38d in 184 aa, and to Clostridium
FT                   acetobutylicum thymidine kinase cac2887 SWALL:Q97F65
FT                   (EMBL:AE007786) (195 aa) fasta scores: E(): 5.1e-56,77.48
FT                   38d in 191 aa"
FT                   /db_xref="GOA:A5HY32"
FT                   /db_xref="InterPro:IPR001267"
FT                   /db_xref="InterPro:IPR020633"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY32"
FT                   /protein_id="CAL81691.1"
FT                   /translation="MYGPKDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPE
FT                   IDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLLDDTDVIGIDEAQFFDDFLVEIVSKI
FT                   ANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKP
FT                   AKKSDPVVLIGAQESYEARCRKCHRVPR"
FT   misc_feature    174003..174542
FT                   /note="Pfam match to entry PF00265 TK, Thymidine
FT                   kinase,score 291.8, E-value 8.6e-85"
FT                   /inference="protein motif:Pfam:PF00265"
FT   misc_feature    174024..174047
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    174501..174542
FT                   /note="PS00603 Thymidine kinase cellular-type signature."
FT                   /inference="protein motif:ProSite:PS00603"
FT   misc_feature    174528..174545
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00190"
FT   CDS_pept        174574..175491
FT                   /transl_table=11
FT                   /locus_tag="CBO0137"
FT                   /product="uputative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein, predicted
FT                   metal-dependent enzyme, yqhq b.subtilis ortholog cac2886
FT                   SWALL:Q97F66 (EMBL:AE007786) (317 aa) fasta scores: E():
FT                   6.8e-73, 60.39 38d in 308 aa, and to Clostridium tetani
FT                   conserved protein ctc00300 SWALL:Q898Y7 (EMBL:AE015936)
FT                   (249 aa) fasta scores: E(): 2.2e-65, 67.33 38d in 248 aa"
FT                   /db_xref="GOA:A5HY33"
FT                   /db_xref="InterPro:IPR010787"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY33"
FT                   /protein_id="CAL81692.1"
FT                   /translation="MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPY
FT                   TKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADN
FT                   ILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLI
FT                   SNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILL
FT                   FSLTGWNNIWQRILYRIILLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKE
FT                   PDLRQLEVAIMALKAAEGIESSME"
FT   misc_feature    order(174718..174786,174892..174960,174994..175062,
FT                   175201..175269)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0137 by TMHMM2.0 at aa 49-71, 107-129, 141-163 and
FT                   210-232"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        175499..176350
FT                   /transl_table=11
FT                   /locus_tag="CBO0138"
FT                   /product="protein methyltransferase"
FT                   /EC_number="2.1.1.-"
FT                   /note="Similar to Escherichia coli, and Shigella flexneri
FT                   protein methyltransferase HemK or b1212 or sf1215 or s1299
FT                   SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E():
FT                   2.3e-16, 30.88 38d in 259 aa, and to Clostridium tetani
FT                   methyltransferase ctc00301 SWALL:Q898Y6 (EMBL:AE015936)
FT                   (292 aa) fasta scores: E(): 1.1e-58,58.69 38d in 276 aa"
FT                   /db_xref="GOA:A5HY34"
FT                   /db_xref="InterPro:IPR002052"
FT                   /db_xref="InterPro:IPR004556"
FT                   /db_xref="InterPro:IPR007848"
FT                   /db_xref="InterPro:IPR019874"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="InterPro:IPR040758"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY34"
FT                   /protein_id="CAL81693.1"
FT                   /translation="MILKDLLIEGYGVLKKASIGSYQIDAQLLLGKVLKKDRLFILTNP
FT                   DYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNFNIKKGVLIPRPDTEILVETV
FT                   LEEIKNKNYKQICDVCCGSGIIGITIGYTLNNTEIICYDIEDIPYNTTKENILKHNLQD
FT                   RVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIETLMDDVKKYEPFEALCGGKDGLF
FT                   FYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEYGFKDVLCIKDLAGKDRVIKAR
FT                   KY"
FT   misc_feature    176054..176074
FT                   /note="PS00092 N-6 Adenine-specific DNA methylases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00092"
FT   CDS_pept        176432..177508
FT                   /transl_table=11
FT                   /gene="prfA"
FT                   /locus_tag="CBO0139"
FT                   /product="peptide chain release factor 1"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Escherichia coli O157:H7, and Shigella flexneri peptide
FT                   chain release factor 1 SWALL:RF1_ECOLI (SWALL:P07011) (360
FT                   aa) fasta scores: E(): 1.5e-63, 50.98 38d in 355 aa, and to
FT                   Clostridium tetani peptide chain release factor 1 prfa or
FT                   ctc00302 SWALL:RF1_CLOTE (SWALL:Q898Y5) (355 aa) fasta
FT                   scores: E(): 9.1e-101, 78.53 38d in 354 aa"
FT                   /db_xref="GOA:A5HY35"
FT                   /db_xref="InterPro:IPR000352"
FT                   /db_xref="InterPro:IPR004373"
FT                   /db_xref="InterPro:IPR005139"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY35"
FT                   /protein_id="CAL81694.1"
FT                   /translation="MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIV
FT                   NTYREYKKAQEDLESDKEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDP
FT                   NDDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTV
FT                   AVKGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRI
FT                   DVYRASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE
FT                   AERAASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIE
FT                   ALVTEDQAEKMKDLGRVN"
FT   misc_feature    176618..176962
FT                   /note="Pfam match to entry PF03462 PCRF, PCRF domain,score
FT                   243.9, E-value 2.4e-70"
FT                   /inference="protein motif:Pfam:PF03462"
FT   misc_feature    177053..177388
FT                   /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA
FT                   hydrolase domain, score 263.4, E-value 3.2e-76"
FT                   /inference="protein motif:Pfam:PF00472"
FT   misc_feature    177107..177157
FT                   /note="PS00745 Prokaryotic-type class I peptide chain
FT                   release factors signature."
FT                   /inference="protein motif:ProSite:PS00745"
FT   CDS_pept        177536..178144
FT                   /transl_table=11
FT                   /locus_tag="CBO0140"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani hypothetical membrane
FT                   protein ctc00303 SWALL:Q898Y4 (EMBL:AE015936) (200 aa)
FT                   fasta scores: E(): 1.4e-28, 46.19 38d in 197 aa, and to
FT                   Clostridium acetobutylicum predicted membrane protein
FT                   cac2883 SWALL:Q97F69 (EMBL:AE007785) (192 aa) fasta scores:
FT                   E(): 1.2e-26, 40.1 38d in 197 aa"
FT                   /db_xref="GOA:A5HY36"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY36"
FT                   /protein_id="CAL81695.1"
FT                   /translation="MDLNKGRRNQKRSYERFVVIMSFIFILLPLFLYLYNKIYDIFYVS
FT                   YLIIIEILIVMAIIIRTDKEKLKFQYSNNRLKIVLGIMNRKLNIVCDKVVLVHIEQYNN
FT                   IYDVEDFRIILLTTSKFRNNKIIKVNEKFLKLHDYAANFYYKLKKIDPEKDFYYTIIKR
FT                   GGLKKYYLLDTLYRTCVYAHFTEECIEKIKELRKEMEID"
FT   misc_feature    order(177572..177640,177656..177715)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0140 by TMHMM2.0 at aa 13-35 and 41-60"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        178204..178923
FT                   /transl_table=11
FT                   /locus_tag="CBO0141"
FT                   /product="putative zinc transporter"
FT                   /note="Similar to Escherichia coli, Escherichia coli O6,and
FT                   Escherichia coli O157:H7 zinc transporter ZupTt or b3040 or
FT                   c3789 or z4397 or ecs3928 SWALL:ZUPT_ECOLI (SWALL:P24198)
FT                   (257 aa) fasta scores: E(): 3.9e-08, 27.53 id in 247 aa,
FT                   and to Clostridium tetani zinc uptake transporter ctc00304
FT                   SWALL:Q898Y3 (EMBL:AE015936) (236 aa) fasta scores: E():
FT                   8.5e-49, 53.81 38d in 236 aa"
FT                   /db_xref="GOA:A5HY37"
FT                   /db_xref="InterPro:IPR003689"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY37"
FT                   /protein_id="CAL81696.1"
FT                   /translation="MSKLLFIIVMGTIISLSGTMIGAIIGISLKDPSEKLLCKFMGFSA
FT                   GLMLSIVVFDLIPEALNSWDFYGVLIFLILGMLIVYFIDKNTNSIDINMHKKVAFMTAL
FT                   GLILHNFPEGILMGVGFQAGNRLGLKMAIIISIHDIPEGIAVATPLIASNEKKSKTLFY
FT                   VFLTAIPTLFGVFLGSYVATISKNFLSILLALASGIMLYVVCAEMIPESRNLGDKLTSY
FT                   FYMIVGIIAGLVIIKLL"
FT   sig_peptide     178204..178270
FT                   /locus_tag="CBO0141"
FT                   /note="probabilty 0.991, with cleavage site probability
FT                   0.476 between residues 23 and 24"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    178204..178911
FT                   /note="Pfam match to entry PF02535 Zip, ZIP Zinc
FT                   transporter, score 75.3, E-value 1.3e-19"
FT                   /inference="protein motif:Pfam:PF02535"
FT   misc_feature    order(178216..178284,178327..178386,178399..178452,
FT                   178495..178563,178687..178755,178765..178821,
FT                   178858..178911)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0141 by TMHMM2.0 at aa 5-27, 42-61, 66-83,
FT                   98-120,162-184, 188-206 and 219-236"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        178944..179999
FT                   /transl_table=11
FT                   /locus_tag="CBO0142"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   translation factor cac2882 SWALL:Q97F70 (EMBL:AE007785)
FT                   (350 aa) fasta scores: E(): 3.6e-85, 68.57 38d in 350
FT                   aa,and to Clostridium tetani sua5 protein ctc00305
FT                   SWALL:Q898Y2 (EMBL:AE015936) (350 aa) fasta scores: E():
FT                   5.9e-83, 66.28 38d in 350 aa"
FT                   /db_xref="GOA:A5HY38"
FT                   /db_xref="InterPro:IPR005145"
FT                   /db_xref="InterPro:IPR006070"
FT                   /db_xref="InterPro:IPR010923"
FT                   /db_xref="InterPro:IPR017945"
FT                   /db_xref="InterPro:IPR038385"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY38"
FT                   /protein_id="CAL81697.1"
FT                   /translation="MKTKVMRLDENNIDEHVISEAGDILRQGGLVVFPTETVYGLGANA
FT                   LDKNAVKGIFQAKGRPQDNPLIVHISKMKDIEKLVQKIPSVAEKLMDKFWPGPMTIILK
FT                   KKDIIPNETSAGLDSIGIRMPSNKIAMKLISMAGVPIAAPSANLSGKPSPTDVETCIED
FT                   LDGKVNIILGGDNSEVGVESTVIDCTINPPCILRPGGITLEMVKEVDSNIYIDPAIMKK
FT                   PDKDLKPKAPGMKYRHYAPKAPLKIIKGDLNKTIEKINEMVQNYIDAEKKVGIIATDET
FT                   IDNYRKGDVVSIGSRKDLNTIAHNLFYVLRSFDEKNVDLILSEAFEEKDMGVAIMNRLK
FT                   KSAGYDIINLD"
FT   misc_feature    179010..179540
FT                   /note="Pfam match to entry PF01300 Sua5_yciO_yrdC, yrdC
FT                   domain, score 230.4, E-value 2.8e-66"
FT                   /inference="protein motif:Pfam:PF01300"
FT   misc_feature    179031..179069
FT                   /note="PS01147 SUA5/yciO/yrdC family signature."
FT                   /inference="protein motif:ProSite:PS01147"
FT   misc_feature    179544..179987
FT                   /note="Pfam match to entry PF03481 SUA5, SUA5 domain,score
FT                   204.2, E-value 2e-58"
FT                   /inference="protein motif:Pfam:PF03481"
FT   CDS_pept        180008..180460
FT                   /transl_table=11
FT                   /locus_tag="CBO0143"
FT                   /product="low molecular weight
FT                   protein-tyrosine-phosphatase"
FT                   /EC_number="3.1.3.48"
FT                   /note="Similar to Acinetobacter johnsonii low molecular
FT                   weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO
FT                   (SWALL:O52787) (142 aa) fasta scores: E(): 4.2e-06, 33.59
FT                   id in 128 aa, and to Clostridium tetani phosphotyrosine
FT                   protein phosphatase ctc00306 SWALL:Q898Y1 (EMBL:AE015936)
FT                   (154 aa) fasta scores: E(): 1.9e-24, 54.05 38d in 148 aa"
FT                   /db_xref="GOA:A5HY39"
FT                   /db_xref="InterPro:IPR017867"
FT                   /db_xref="InterPro:IPR023485"
FT                   /db_xref="InterPro:IPR036196"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY39"
FT                   /protein_id="CAL81698.1"
FT                   /translation="MNILFVCTGNTCRSFMAEAIFNSLNNMEELTAKSAGIAVVPGSVS
FT                   SSNACKIINEDINVDLSNREAIQLDEEILDQSDLILTMTYSAKDLLSNLSLEDSDRIFC
FT                   ITEYVGQKGEILDPFGGDIEVYKNTYEQLKNIILLLLKKLKEDRQN"
FT   misc_feature    180008..180436
FT                   /note="Pfam match to entry PF01451 LMWPc, Low molecular
FT                   weight phosphotyrosine protein phosphatase, score
FT                   85.8,E-value 9.3e-23"
FT                   /inference="protein motif:Pfam:PF01451"
FT   CDS_pept        180520..180957
FT                   /transl_table=11
FT                   /gene="rpiB"
FT                   /locus_tag="CBO0144"
FT                   /product="ribose 5-phosphate isomerase"
FT                   /EC_number="5.3.1.6"
FT                   /note="Similar to Escherichia coli ribose 5-phosphate
FT                   isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351)
FT                   (149 aa) fasta scores: E(): 2.2e-27, 52.77 38d in 144
FT                   aa,and to Clostridium tetani ribose 5-phosphate isomerase
FT                   ctc00307 SWALL:Q898Y0 (EMBL:AE015936) (149 aa) fasta
FT                   scores: E(): 1.5e-43, 78.47 38d in 144 aa"
FT                   /db_xref="GOA:A5HY40"
FT                   /db_xref="InterPro:IPR003500"
FT                   /db_xref="InterPro:IPR004785"
FT                   /db_xref="InterPro:IPR036569"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY40"
FT                   /protein_id="CAL81699.1"
FT                   /translation="MKIALGSDHAGLPLKNEIIKHLEGKGIEIKDFGTYTEESCDYPDY
FT                   AQKVAEKVVAKEFDFGILVCGTGIGISIAANKVKGVRAALCSDTFSAHACREHNNANIL
FT                   ALGQRVVGVGLALDIVDNFLNAEFQGGRHENRINKMMRIEK"
FT   misc_feature    180700..180942
FT                   /note="Pfam match to entry PF02502
FT                   LacAB_rpiB,Ribose/Galactose Isomerase, score 170.3, E-value
FT                   3.3e-48"
FT                   /inference="protein motif:Pfam:PF02502"
FT   CDS_pept        180987..181616
FT                   /transl_table=11
FT                   /gene="upp"
FT                   /locus_tag="CBO0145"
FT                   /product="uracil phosphoribosyltransferase"
FT                   /EC_number="2.4.2.9"
FT                   /note="Similar to Bacillus subtilis uracil
FT                   phosphoribosyltransferase Upp or Ipc-35D or bsu36890
FT                   SWALL:UPP_BACSU (SWALL:P39149) (209 aa) fasta scores: E():
FT                   5.6e-53, 68.9 38d in 209 aa, and to Clostridium tetani
FT                   uracil phosphoribosyltransferase Upp or ctc00308
FT                   SWALL:UPP_CLOTE (SWALL:Q898X9) (209 aa) fasta scores: E():
FT                   8.6e-66, 86.12 38d in 209 aa"
FT                   /db_xref="GOA:A5HY41"
FT                   /db_xref="InterPro:IPR000836"
FT                   /db_xref="InterPro:IPR005765"
FT                   /db_xref="InterPro:IPR029057"
FT                   /db_xref="InterPro:IPR034332"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY41"
FT                   /protein_id="CAL81700.1"
FT                   /translation="MSKVTQIAHPLILHKLALIRDKNTGSKDFRELVEEVAMLMAYEVT
FT                   RDLQLKEVEIETPICKTKCKMLSGKKVAIVPILRAGLGMVGGMTSLIPAAKVGHIGLYR
FT                   DEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGAKHIRLMCLVAA
FT                   PEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGTK"
FT   misc_feature    181062..181535
FT                   /note="Pfam match to entry PF00156
FT                   Pribosyltran,Phosphoribosyl transferase domain, score 46.3,
FT                   E-value 7.3e-11"
FT                   /inference="protein motif:Pfam:PF00156"
FT   repeat_region   181944..181980
FT                   /rpt_family="CB.598"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="tatttttatagctatctatcgaccaaaagtatttctt"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        182123..182611
FT                   /transl_table=11
FT                   /locus_tag="CBO0146"
FT                   /product="putative zinc-binding protein"
FT                   /note="Similar to Clostridium tetani comE operon protein 2
FT                   ctc00309 SWALL:Q898X8 (EMBL:AE015936) (162 aa) fasta
FT                   scores: E(): 6.7e-56, 81.48 38d in 162 aa, and to
FT                   Clostridium acetobutylicum deoxycytidylate deaminase
FT                   cac2876 SWALL:Q97F76 (EMBL:AE007785) (162 aa) fasta scores:
FT                   E(): 1.9e-44, 67.28 38d in 162 aa"
FT                   /db_xref="GOA:A5HY42"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR015517"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="InterPro:IPR016473"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY42"
FT                   /protein_id="CAL81701.1"
FT                   /translation="MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTG
FT                   APRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIISARRQDMIASTMYLVGKE
FT                   YSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDGSY"
FT   misc_feature    182135..182530
FT                   /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine
FT                   and deoxycytidylate deaminase zinc-binding region, score
FT                   69.6, E-value 6.9e-18"
FT                   /inference="protein motif:Pfam:PF00383"
FT   misc_feature    182357..182494
FT                   /note="PS00903 Cytidine and deoxycytidylate deaminases
FT                   zinc-binding region signature."
FT                   /inference="protein motif:ProSite:PS00903"
FT   CDS_pept        182719..183753
FT                   /transl_table=11
FT                   /gene="tagO"
FT                   /locus_tag="CBO0147"
FT                   /product="probable undecaprenyl-phosphate
FT                   N-acetylglucosaminyl 1-phosphate transferase"
FT                   /EC_number="2.7.8.-"
FT                   /note="Similar to Bacillus subtilis probable
FT                   undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate
FT                   transferase tago or bsu35530 SWALL:TAGO_BACSU
FT                   (SWALL:O34753) (358 aa) fasta scores: E(): 7.2e-47, 41.32
FT                   id in 346 aa, and to Clostridium tetani putative
FT                   undecaprenyl-phosphate
FT                   alpha-N-acetylglucosaminyltransferase ctc00310 SWALL:Q898X7
FT                   (EMBL:AE015936) (353 aa) fasta scores: E(): 9e-86, 67.85
FT                   38d in 336 aa"
FT                   /db_xref="GOA:A5HY43"
FT                   /db_xref="InterPro:IPR000715"
FT                   /db_xref="InterPro:IPR018480"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY43"
FT                   /protein_id="CAL81702.1"
FT                   /translation="MDTKLYIIGAITAIVLSVILTPIVKKAAFILGVVDIPKDKRKIHK
FT                   KPIPLLGGIAIYISFVVALILKKGPLTLEEIGIILGSTVIVIGGFIDDKYDMSPIKKIL
FT                   FQLAAAICLIICGLKIQFITNPFDHLNLYVGLHIFAIPITIVWVIGITNALNLIDGLDG
FT                   LAAGVALISCITMFVIAVLNQRWEAAILTSILGGSILGFLPYNFNPASIFMGDTGSQLL
FT                   GFLLAAISIEGAIKSATAFAIVVPILALGLPIYDTLFAMIRRKINGKPIMQADRGHLHH
FT                   RLLDMGLTQRQAVIIMYLISAVLGSFAIIAMQISNQKSYFLLTAIMLALILIAWKCGFF
FT                   SHKE"
FT   sig_peptide     182719..182794
FT                   /gene="tagO"
FT                   /locus_tag="CBO0147"
FT                   /note="probabilty 0.632, with cleavage site probability
FT                   0.588 between residues 26 and 27"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(182731..182790,182857..182916,182929..182997,
FT                   183025..183084,183103..183171,183199..183267,
FT                   183286..183354,183436..183504,183595..183663,
FT                   183676..183744)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0147 by TMHMM2.0 at aa 5-24, 47-66, 71-93,
FT                   103-122,129-151, 161-183, 190-212, 240-262, 293-315 and
FT                   320-342"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    182941..183435
FT                   /note="Pfam match to entry PF00953 Glycos_transf_4,Glycosyl
FT                   transferase, score 155.9, E-value 7.4e-44"
FT                   /inference="protein motif:Pfam:PF00953"
FT   CDS_pept        183767..184924
FT                   /transl_table=11
FT                   /gene="mnaA"
FT                   /locus_tag="CBO0148"
FT                   /product="udp-N-acetylglucosamine 2-epimerase"
FT                   /EC_number="5.1.3.14"
FT                   /note="Similar to Bacillus subtilis udp-N-acetylglucosamine
FT                   2-epimerase MnaA or bsu35660 SWALL:MNAA_BACSU
FT                   (SWALL:P39131) (380 aa) fasta scores: E(): 7.6e-76, 56.69
FT                   38d in 381 aa, and to Clostridium perfringens
FT                   udp-N-acetylglucosamine 2-epimerase cpe2196 SWALL:Q8XIC5
FT                   (EMBL:AP003193) (384 aa) fasta scores: E(): 2.5e-107, 77.16
FT                   38d in 381 aa"
FT                   /db_xref="GOA:A5HY44"
FT                   /db_xref="InterPro:IPR003331"
FT                   /db_xref="InterPro:IPR029767"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY44"
FT                   /protein_id="CAL81703.1"
FT                   /translation="MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREM
FT                   LDQVLELFNIKPDFDLNIMKSKQSLTGITTRVLEGLEEIFDKEKPNLILVHGDTTTTFA
FT                   GALAGFYKQIKVGHVEAGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLLREA
FT                   IDEESIFVTGNTVIDAMEFTIEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIEN
FT                   ICNALKTIVEKYKDVEIVYLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKC
FT                   YMLMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVKVGTVRLVGTDKEVITKEVFDLIEN
FT                   KQKYDIMSKAINPYGDGKASIRIVDSILYYFDKIEKRPQEFHANK"
FT   misc_feature    183836..184870
FT                   /note="Pfam match to entry PF02350
FT                   Epimerase_2,UDP-N-acetylglucosamine 2-epimerase, score
FT                   561.1, E-value 7.6e-166"
FT                   /inference="protein motif:Pfam:PF02350"
FT   CDS_pept        185416..185784
FT                   /transl_table=11
FT                   /locus_tag="CBO0149"
FT                   /product="putative subunit of ATP synthase protein"
FT                   /note="Similar to Anabaena sp. ATP synthase protein I AtpI
FT                   or Atp1 or all0011 SWALL:ATPZ_ANASP (SWALL:P12403) (122 aa)
FT                   fasta scores: E(): 0.95, 21.42 38d in 112 aa, and to
FT                   Clostridium pasteurianum ATP synthase subunit I AtpI
FT                   SWALL:Q93Q51 (EMBL:AF283808) (123 aa) fasta scores: E():
FT                   2.7e-07, 32.77 38d in 119 aa"
FT                   /db_xref="GOA:A5HY45"
FT                   /db_xref="InterPro:IPR005598"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY45"
FT                   /protein_id="CAL81704.1"
FT                   /translation="MIKEIKEMISRITIFNFIIGITFFIIIYLTFNISYSFCFLLGLIL
FT                   ANINLFINAKTTNMIIIKNKNSILSILGFFVRIIIVCALGLLLSKDNTKNIIPFLLGYS
FT                   SNFISIIFYGTNLGKNKV"
FT   misc_feature    order(185449..185508,185518..185577,185614..185682,
FT                   185710..185769)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0149 by TMHMM2.0 at aa 12-31, 35-54, 67-89 and 99-118"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        185799..186479
FT                   /transl_table=11
FT                   /gene="atpA"
FT                   /gene_synonym="atpB"
FT                   /locus_tag="CBO0150"
FT                   /product="ATP synthase A chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase A
FT                   chain AtpB or AtpA or cac2871 SWALL:ATP6_CLOAB
FT                   (SWALL:O05097) (221 aa) fasta scores: E(): 1.9e-37, 44.54
FT                   id in 220 aa, and to Clostridium perfringens ATP synthase A
FT                   chain AtpI or cpe2193 SWALL:Q8XIC8 (EMBL:AP003193) (224 aa)
FT                   fasta scores: E(): 6.4e-45, 51.32 38d in 226 aa"
FT                   /db_xref="GOA:A5HY46"
FT                   /db_xref="InterPro:IPR000568"
FT                   /db_xref="InterPro:IPR023011"
FT                   /db_xref="InterPro:IPR035908"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY46"
FT                   /protein_id="CAL81705.1"
FT                   /translation="MEKFSPLFYINLFGYKFGITSSLVIQWVIIAIVALLSIILTRNLK
FT                   KVPDKRQTVMEMMLDLVRNLVNENMGEEFKSFIPFIGTLMIYLLLMNLVGLLGLKPPTL
FT                   DYSVVLGMALISFVVIQGYAIRKTGLKSYFLGYGKPYLFLLPLNVIERVMLPVSLSLRL
FT                   FGNITAAVLIMDLVYSALASISWFAQLVVPIPLHIYFDLFDGTIQMVIFVMLTMINIKV
FT                   IAEH"
FT   misc_feature    order(185847..185915,186027..186095,186114..186173,
FT                   186216..186284,186303..186371,186414..186467)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0150 by TMHMM2.0 at aa 17-39, 77-99, 106-125,
FT                   140-162,169-191 and 206-223"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    186018..186464
FT                   /note="Pfam match to entry PF00119 ATP-synt_A, ATP synthase
FT                   A chain, score 75.1, E-value 1.5e-19"
FT                   /inference="protein motif:Pfam:PF00119"
FT   misc_feature    186270..186299
FT                   /note="PS00449 ATP synthase a subunit signature."
FT                   /inference="protein motif:ProSite:PS00449"
FT   CDS_pept        186519..186758
FT                   /transl_table=11
FT                   /gene="atpC"
FT                   /gene_synonym="atpE"
FT                   /locus_tag="CBO0151"
FT                   /product="ATP synthase c chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase C
FT                   chain AtpE or AtpC or cac2870 SWALL:ATPL_CLOAB
FT                   (SWALL:O08310) (81 aa) fasta scores: E(): 7.5e-12, 50.64 id
FT                   in 77 aa, and to Clostridium pasteurianum ATP synthase
FT                   subunit C AtpE SWALL:Q93Q49 (EMBL:AF283808) (83 aa) fasta
FT                   scores: E(): 1.4e-12, 53.24 38d in 77 aa"
FT                   /db_xref="GOA:A5HY47"
FT                   /db_xref="InterPro:IPR000454"
FT                   /db_xref="InterPro:IPR002379"
FT                   /db_xref="InterPro:IPR005953"
FT                   /db_xref="InterPro:IPR020537"
FT                   /db_xref="InterPro:IPR035921"
FT                   /db_xref="InterPro:IPR038662"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY47"
FT                   /protein_id="CAL81706.1"
FT                   /translation="MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPE
FT                   ASGKIMSTLVIGSAFSEATAIYGLIIALFLIFKI"
FT   sig_peptide     186519..186612
FT                   /gene="atpC"
FT                   /gene_synonym="atpE"
FT                   /locus_tag="CBO0151"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.553 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(186531..186599,186681..186749)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0151 by TMHMM2.0 at aa 5-27 and 55-77"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    186546..186752
FT                   /note="Pfam match to entry PF00137 ATP-synt_C, ATP synthase
FT                   subunit C, score 102.5, E-value 8.6e-28"
FT                   /inference="protein motif:Pfam:PF00137"
FT   misc_feature    186552..186584
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    186639..186704
FT                   /note="PS00605 ATP synthase c subunit signature."
FT                   /inference="protein motif:ProSite:PS00605"
FT   CDS_pept        186834..187313
FT                   /transl_table=11
FT                   /gene="atpB"
FT                   /gene_synonym="atpF"
FT                   /locus_tag="CBO0152"
FT                   /product="ATP synthase B chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase B
FT                   chain AtpF or AtpB or cac2869 SWALL:ATPF_CLOAB
FT                   (SWALL:O05098) (159 aa) fasta scores: E(): 8.5e-19, 49.68
FT                   id in 159 aa"
FT                   /db_xref="GOA:A5HY48"
FT                   /db_xref="InterPro:IPR002146"
FT                   /db_xref="InterPro:IPR005864"
FT                   /db_xref="InterPro:IPR028987"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY48"
FT                   /protein_id="CAL81707.1"
FT                   /translation="MNISIPQIIAAILNFIILLLIVKHFWFDKITAVVDSRQSEIINKI
FT                   EDTDKNQKLALELKEKNELELSNAKKQGKTIVEEYKSKAENVYEDIVKEAHEEADRIIK
FT                   KSRLEAERQKKNAEEEIRAEAVELAVLVSSKTLEKTIDDLEHRRLIKDFISKVGI"
FT   misc_feature    186846..186914
FT                   /note="1 probable transmembrane helix predicted for CBO0152
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    186852..187310
FT                   /note="Pfam match to entry PF00430 ATP-synt_B, ATP synthase
FT                   B/B' CF(0), score 76.6, E-value 5.3e-20"
FT                   /inference="protein motif:Pfam:PF00430"
FT   CDS_pept        187316..187855
FT                   /transl_table=11
FT                   /gene="atpH"
FT                   /locus_tag="CBO0153"
FT                   /product="ATP synthase subunit delta"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase
FT                   subunit delta AtpH or cac2868 SWALL:Q9Z690 (EMBL:AF101055)
FT                   (179 aa) fasta scores: E(): 1e-30, 56.98 38d in 179 aa"
FT                   /db_xref="GOA:A5HY49"
FT                   /db_xref="InterPro:IPR000711"
FT                   /db_xref="InterPro:IPR020781"
FT                   /db_xref="InterPro:IPR026015"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY49"
FT                   /protein_id="CAL81708.1"
FT                   /translation="MYEYLDRRYALALYEVAEENNKVDEYLRDLKEVVNIIKNSEDICK
FT                   ILKHPEINTSRKKEIFTELFKDKVDDKILSFLLVLIEKDRILYLEEKLKEMEKIYLEKN
FT                   NMILANIKTVIPLLKEEREELIEKLGNKYNKKIILEEEIDKSIIGGVYVRVGDDVLDGT
FT                   LSTRLKDIKKMMLKRE"
FT   misc_feature    187328..187840
FT                   /note="Pfam match to entry PF00213 OSCP, ATP synthase delta
FT                   (OSCP) subunit, score 149.0, E-value 8.6e-42"
FT                   /inference="protein motif:Pfam:PF00213"
FT   misc_feature    187724..187783
FT                   /note="PS00389 ATP synthase delta (OSCP) subunit
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00389"
FT   CDS_pept        187866..189380
FT                   /transl_table=11
FT                   /gene="atpA"
FT                   /locus_tag="CBO0154"
FT                   /product="ATP synthase alpha chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase
FT                   alpha chain AtpA or cac2867 SWALL:ATPA_CLOAB (SWALL:Q9Z689)
FT                   (505 aa) fasta scores: E(): 2.5e-146,79.32 38d in 503 aa"
FT                   /db_xref="GOA:A5HY50"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="InterPro:IPR000793"
FT                   /db_xref="InterPro:IPR004100"
FT                   /db_xref="InterPro:IPR005294"
FT                   /db_xref="InterPro:IPR020003"
FT                   /db_xref="InterPro:IPR023366"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR033732"
FT                   /db_xref="InterPro:IPR036121"
FT                   /db_xref="InterPro:IPR038376"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY50"
FT                   /protein_id="CAL81709.1"
FT                   /translation="MNIKPEEITSIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGLE
FT                   DCMEGELIEFPNDVYGMALNLEQDNVGCVLLGSEEGIKEGNVVKRTKKVVEVPVGEALV
FT                   GRVVNSLGMPIDGKGPVLTTETRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQ
FT                   RELIIGDRQTGKTAIAMDTILNQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTI
FT                   VVSSTASDSAPLQYLAPYAGCSMGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPP
FT                   GREAYPGDVFYLHSRLLERSARLSEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDG
FT                   QIFLESELFNAGQRPAVNAGISVSRVGGNAQIKAMKQVAGTLRLELAQYRELAAFSQFG
FT                   SDLDKESVKRLEKGKRLVEILKQPQYSPMPVEKEIIILYAAVSNHLIDIPVNKIKEFEK
FT                   ELFNYIDTHYRDIGKDILEHKQLTDELKSKLDKAINDFKNVFLSEI"
FT   misc_feature    187935..188141
FT                   /note="Pfam match to entry PF02874 ATP-synt_ab_N, ATP
FT                   synthase alpha/beta family, beta-barrel domain, score 82.9,
FT                   E-value 6.9e-22"
FT                   /inference="protein motif:Pfam:PF02874"
FT   misc_feature    188370..188393
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    188433..188975
FT                   /note="Pfam match to entry PF00006 ATP-synt_ab, ATP
FT                   synthase alpha/beta family, nucleotide-binding domain,score
FT                   368.5, E-value 7.5e-108"
FT                   /inference="protein motif:Pfam:PF00006"
FT   misc_feature    188928..188957
FT                   /note="PS00152 ATP synthase alpha and beta subunits
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00152"
FT   misc_feature    188979..189305
FT                   /note="Pfam match to entry PF00306 ATP-synt_ab_C, ATP
FT                   synthase alpha/beta chain, C terminal domain, score
FT                   123.1,E-value 5.3e-34"
FT                   /inference="protein motif:Pfam:PF00306"
FT   CDS_pept        189402..190250
FT                   /transl_table=11
FT                   /gene="atpG"
FT                   /locus_tag="CBO0155"
FT                   /product="ATP synthase subunit gamma"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase
FT                   subunit gamma AtpG or cac2866 SWALL:Q9Z688 (EMBL:AF101055)
FT                   (282 aa) fasta scores: E(): 9.3e-48, 48.93 38d in 282
FT                   aa,and to Clostridium pasteurianum ATP synthase gamma
FT                   subunit AtpG SWALL:Q93Q45 (EMBL:AF283808) (281 aa) fasta
FT                   scores: E(): 1.3e-52, 53.21 38d in 280 aa"
FT                   /db_xref="GOA:A5HY51"
FT                   /db_xref="InterPro:IPR000131"
FT                   /db_xref="InterPro:IPR023632"
FT                   /db_xref="InterPro:IPR035968"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY51"
FT                   /protein_id="CAL81710.1"
FT                   /translation="MAGAGLIGIRRRIKSVTNIRKITKAMGLVSTAKLRKARVNLEINK
FT                   KYYNEYKIILKDIINFIEDSNIYIDGNGSHKKLYVIFTSDSGLCGSFNINIINNVINEI
FT                   KEDKENSLVIVIGQKGRMYLKKLGINTLAEYIEIPDVPTTKEAGTIAKNIIKLYSSKEV
FT                   GEVFLVYSEFYSPVKQQVLINKILPFTKENKSDNKYIEFNPPVTQLMDEILENYLKATI
FT                   LNCFSNSKASENGSRMTAMNGATDNANDLLDNLDLQFNRLRQSAITQEISEIVGGAEAQ
FT                   R"
FT   misc_feature    189411..190244
FT                   /note="Pfam match to entry PF00231 ATP-synt, ATP
FT                   synthase,score 292.0, E-value 7.9e-85"
FT                   /inference="protein motif:Pfam:PF00231"
FT   misc_feature    190200..190241
FT                   /note="PS00153 ATP synthase gamma subunit signature."
FT                   /inference="protein motif:ProSite:PS00153"
FT   CDS_pept        190264..191655
FT                   /transl_table=11
FT                   /gene="atpD"
FT                   /locus_tag="CBO0156"
FT                   /product="ATP synthase beta chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase
FT                   beta chain AtpD or cac2865 SWALL:ATPB_CLOAB (SWALL:Q9Z687)
FT                   (466 aa) fasta scores: E(): 1.5e-135, 81.52 38d in 460 aa"
FT                   /db_xref="GOA:A5HY52"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR004100"
FT                   /db_xref="InterPro:IPR005722"
FT                   /db_xref="InterPro:IPR020003"
FT                   /db_xref="InterPro:IPR024034"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR036121"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY52"
FT                   /protein_id="CAL81711.1"
FT                   /translation="MSNLGKVIQIIGPIIDIKFDSENLPDLFNALEINAGDRKVIAEVE
FT                   QHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLFNVLGKPIDGAGEFI
FT                   SEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQE
FT                   LINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFGQMNEPPGARMRVA
FT                   LTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQ
FT                   ERITSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSITELGIYPAVDPLE
FT                   SSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEEDKLVVGRARKIQ
FT                   RFLSQPFTVAEQFTGMQGKYVPIKETVRGFKEILEGKHDNIPESAFLFQGTIEDVLKKA
FT                   QQMEI"
FT   misc_feature    190282..190485
FT                   /note="Pfam match to entry PF02874 ATP-synt_ab_N, ATP
FT                   synthase alpha/beta family, beta-barrel domain, score 91.3,
FT                   E-value 2.1e-24"
FT                   /inference="protein motif:Pfam:PF02874"
FT   misc_feature    190714..190737
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    190780..191310
FT                   /note="Pfam match to entry PF00006 ATP-synt_ab, ATP
FT                   synthase alpha/beta family, nucleotide-binding domain,score
FT                   301.2, E-value 1.3e-87"
FT                   /inference="protein motif:Pfam:PF00006"
FT   misc_feature    191263..191292
FT                   /note="PS00152 ATP synthase alpha and beta subunits
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00152"
FT   misc_feature    191317..191652
FT                   /note="Pfam match to entry PF00306 ATP-synt_ab_C, ATP
FT                   synthase alpha/beta chain, C terminal domain, score
FT                   169.6,E-value 5.6e-48"
FT                   /inference="protein motif:Pfam:PF00306"
FT   CDS_pept        191680..192081
FT                   /transl_table=11
FT                   /gene="atpC"
FT                   /locus_tag="CBO0157"
FT                   /product="ATP synthase epsilon chain"
FT                   /EC_number="3.6.3.14"
FT                   /note="Similar to Clostridium acetobutylicum ATP synthase
FT                   epsilon chain AtpC or cac2864 SWALL:ATPE_CLOAB
FT                   (SWALL:Q9Z686) (133 aa) fasta scores: E(): 4.7e-21, 48.85
FT                   id in 131 aa"
FT                   /db_xref="GOA:A5HY53"
FT                   /db_xref="InterPro:IPR001469"
FT                   /db_xref="InterPro:IPR020546"
FT                   /db_xref="InterPro:IPR020547"
FT                   /db_xref="InterPro:IPR036771"
FT                   /db_xref="InterPro:IPR036794"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY53"
FT                   /protein_id="CAL81712.1"
FT                   /translation="MKDNIELTIFTPEKNIKIGEIKEVITEGLDGDLAILPNHVNMITY
FT                   LKPTITKYIDLNGNKNNIFTSSGVLKVEDNKVYIICDASEKPEDIDIKRAENARKRAEE
FT                   RLRNKKEIDVKRAELALFRSIARIKIKEL"
FT   misc_feature    191689..191937
FT                   /note="Pfam match to entry PF02823 ATP-synt_DE_N, ATP
FT                   synthase, Delta/Epsilon chain, beta-sandwich domain, score
FT                   44.8, E-value 2.1e-10"
FT                   /inference="protein motif:Pfam:PF02823"
FT   CDS_pept        192274..192981
FT                   /transl_table=11
FT                   /locus_tag="CBO0158"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   membrane protein cac2863 SWALL:Q97F78 (EMBL:AE007784) (235
FT                   aa) fasta scores: E(): 2.2e-13, 31.09 38d in 238 aa"
FT                   /db_xref="GOA:A5HY54"
FT                   /db_xref="InterPro:IPR014794"
FT                   /db_xref="InterPro:IPR036209"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY54"
FT                   /protein_id="CAL81713.1"
FT                   /translation="MNKKIKFGILIILLFSIIIVLFIPKNYSKAKDKDDLFFEIVDETN
FT                   SNIIEVGSNVTFSTKLQNEEIAKEICSYLGLDKDFNKNSINKNGNYNIYFYDEEVSGNI
FT                   SIKECNDENIVMVDFKSFTLNKSFINLKNNLKSYLNLKNKKDYVFEYLKAENDSKNLKK
FT                   LNDDIILILNKSNARNIEAIKLDNGYSTTAYTKRYTPIKVCGKKIDFNYAVCKYNSEKT
FT                   YLILGTPQINLTY"
FT   sig_peptide     192274..192361
FT                   /locus_tag="CBO0158"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.895 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        193005..194261
FT                   /transl_table=11
FT                   /gene="murA"
FT                   /gene_synonym="muraA"
FT                   /locus_tag="CBO0159"
FT                   /product="udp-N-acetylglucosamine 1-carboxyvinyltransferase
FT                   1"
FT                   /EC_number="2.5.1.7"
FT                   /note="Similar to Bacillus subtilis udp-N-acetylglucosamine
FT                   1-carboxyvinyltransferase 1 MuraA or MurA or bsu36760
FT                   SWALL:MUA1_BACSU (SWALL:P70965) (436 aa) fasta scores: E():
FT                   3.2e-82, 55.47 38d in 420 aa, and to Clostridium tetani
FT                   udp-N-acetylglucosamine 1-carboxyvinyltransferase ctc00314
FT                   SWALL:Q898X3 (EMBL:AE015936) (417 aa) fasta scores: E():
FT                   3.4e-116,75.54 38d in 417 aa"
FT                   /db_xref="GOA:A5HY55"
FT                   /db_xref="InterPro:IPR001986"
FT                   /db_xref="InterPro:IPR005750"
FT                   /db_xref="InterPro:IPR013792"
FT                   /db_xref="InterPro:IPR036968"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY55"
FT                   /protein_id="CAL81714.1"
FT                   /translation="MDKIVVNGGSQLKGDVNISTAKNSVLPIIAGSILSGNKCVIDNAP
FT                   MLEDVFVIGEILKSISAKVNIDEVNNRVIIDSKPVDNLEPDSDLVKKMRASFLLMGPMM
FT                   SRFGRFKISLPGGCNIGTRPIDLHLKGFTALGAKVNIGHGYVEAVADKLIGNKIYLDFP
FT                   SVGATENIMMASVMAEGETVIENAAEEPEIEDLGRFLNSIGANIIGAGTDTVRIIGVNE
FT                   LKGTTHRPIYDRIEAGTFMIAAAITKSRIKINGVIEEHLKPIIAKLTEMGVDIKIKGET
FT                   AIVDGRKILNPVDIKTMPYPGFPTDMQAQMMALLATIKGTSIITETIFENRFMHVSEMK
FT                   RMGADVKIDGRSAVIEGVNKLTGTEVKATDLRAGAALILCALAAEGKTEITDVYHIDRG
FT                   YVKIEEKLNKLGANIRRVH"
FT   misc_feature    193026..194225
FT                   /note="Pfam match to entry PF00275 EPSP_synthase, EPSP
FT                   synthase (3-phosphoshikimate
FT                   1-carboxyvinyltransferase),score 473.9, E-value 1.3e-139"
FT                   /inference="protein motif:Pfam:PF00275"
FT   misc_feature    194145..194168
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        194531..195607
FT                   /transl_table=11
FT                   /gene="spoIID"
FT                   /gene_synonym="spoIIC"
FT                   /locus_tag="CBO0160"
FT                   /product="stage II sporulation protein D"
FT                   /note="Similar to Bacillus subtilis stage ii sporulation
FT                   protein D SpoIID or spoIIC or bsu36750 SWALL:SP2D_BACSU
FT                   (SWALL:P07372) (343 aa) fasta scores: E(): 2.9e-17, 35.07
FT                   id in 345 aa, and to Clostridium tetani stage II
FT                   sporulation protein D ctc00315 SWALL:Q898X2 (EMBL:AE015936)
FT                   (376 aa) fasta scores: E(): 1.9e-56,48.17 38d in 357 aa"
FT                   /db_xref="GOA:A5HY56"
FT                   /db_xref="InterPro:IPR013486"
FT                   /db_xref="InterPro:IPR013693"
FT                   /db_xref="InterPro:IPR014225"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY56"
FT                   /protein_id="CAL81715.1"
FT                   /translation="MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETI
FT                   SKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNEKVVKSIPLEEYVKGVVSAEMPAEF
FT                   HIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEK
FT                   RNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKS
FT                   PGEEKAPKFKSSKKISYDQFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKID
FT                   NIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDY
FT                   ILKHYYKGVNMEILKYSD"
FT   sig_peptide     194531..194636
FT                   /gene="spoIID"
FT                   /gene_synonym="spoIIC"
FT                   /locus_tag="CBO0160"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.327 between residues 36 and 37"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    195509..195532
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   repeat_region   complement(195728..195811)
FT                   /note="intergenic repeat 1"
FT   repeat_region   195931..195960
FT   CDS_pept        196139..196885
FT                   /transl_table=11
FT                   /locus_tag="CBO0161"
FT                   /product="putative secreted peptidase"
FT                   /note="Similar to Clostridium tetani conserved
FT                   membrane-associated protein ctc00316 SWALL:Q898X1
FT                   (EMBL:AE015936) (271 aa) fasta scores: E(): 1.1e-27, 51.6
FT                   id in 250 aa, and to Clostridium perfringens hypothetical
FT                   protein Cpe2182 cpe2182 SWALL:Q8XID9 (EMBL:AP003193) (256
FT                   aa) fasta scores: E(): 1.5e-17, 32.94 38d in 255 aa"
FT                   /db_xref="GOA:A5HY57"
FT                   /db_xref="InterPro:IPR011055"
FT                   /db_xref="InterPro:IPR016047"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY57"
FT                   /protein_id="CAL81716.1"
FT                   /translation="MEKKPSNKKSNFFKKEGFYVVLFLCLCIVAAIAAISVKSNSHVKK
FT                   EPIENKVVENKKEKDSAKAIEGNSKSYNNALEVKKEENKENEKEKNKENEKSKQNEKET
FT                   AQVSKAENNSFIKPVEGTLARVYSEDPVFWSSTSSYRANLGLDIKAKLNSPVCSIADGK
FT                   VEDIVTSSQDGVKVTVNHQNGIKSVYANLDPKVKVTKGQQIKQGSLIGNVGKTTLRAAY
FT                   EKYGDHLHFAMMKGNKYINPSKHIKY"
FT   sig_peptide     196139..196253
FT                   /locus_tag="CBO0161"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.395 between residues 39 and 40"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    196607..196873
FT                   /note="Pfam match to entry PF01551 Peptidase_M37,Peptidase
FT                   family M23/M37, score 54.6, E-value 2.2e-13"
FT                   /inference="protein motif:Pfam:PF01551"
FT   CDS_pept        196993..197247
FT                   /transl_table=11
FT                   /gene="spoIIID"
FT                   /locus_tag="CBO0162"
FT                   /product="stage III sporulation protein D"
FT                   /note="Similar to Bacillus subtilis stage III sporulation
FT                   protein D SpoIIID or bsu36420 SWALL:SP3D_BACSU
FT                   (SWALL:P15281) (93 aa) fasta scores: E(): 1.1e-16, 62.65 id
FT                   in 83 aa, and to Clostridium acetobutylicum stage iii
FT                   sporulation protein D SpoIIID cac2859 SWALL:Q97F82
FT                   (EMBL:AE007783) (84 aa) fasta scores: E(): 9e-24, 89.28 id
FT                   in 84 aa"
FT                   /db_xref="GOA:A5HY58"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR014208"
FT                   /db_xref="InterPro:IPR018356"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY58"
FT                   /protein_id="CAL81717.1"
FT                   /translation="MKDYIEERVLEVAHYIIDSKATIRKTAKVFGVSKSTIHKDMTERL
FT                   PKINPQIAEEAKEILDYNKAERHIRGGKATKMKYKAIEG"
FT   misc_feature    197014..197115
FT                   /note="PS00894 Bacterial regulatory proteins, deoR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00894"
FT   misc_feature    197053..197118
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1446.000, SD 4.11 at aa 21-42, sequence
FT                   ATIRKTAKVFGVSKSTIHKDMT"
FT   CDS_pept        197347..198375
FT                   /transl_table=11
FT                   /gene="mreB"
FT                   /locus_tag="CBO0163"
FT                   /product="rod shape-determining protein"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Salmonella typhimurium, Salmonella typhi, and Shigella
FT                   flexneri rod shape-determining protein MreB
FT                   SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E():
FT                   4.4e-58, 51.67 38d in 329 aa, and to Clostridium tetani rod
FT                   shape-determining protein MreB mreb or ctc00318
FT                   SWALL:Q898X0 (EMBL:AE015937) (343 aa) fasta scores: E():
FT                   1.4e-89, 76.6 38d in 342 aa"
FT                   /db_xref="GOA:A5HY59"
FT                   /db_xref="InterPro:IPR004753"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY59"
FT                   /protein_id="CAL81718.1"
FT                   /translation="MFFSVGTDMGIDLGTATVLVYMKGKGVILNEPSVVAIDRNKNKVL
FT                   AVGQEAREMIGRTPGNIVAIRPMRDGVISDYDITEKMLKYFIGKACGKKKISAPRVVIC
FT                   IPSEATEVEKRAVMDAARNAGAKKVFLIEEPLAAAIGADLDITKASGSMIIDIGGGTTD
FT                   IAVISLGGIVVRSSIKIAGDKFDDAVIKYIRKKHKLMIGERTAEDLKIKIGSAFRKGEN
FT                   TSMDIRGRDLVTGLPKNLTVTSDEMREALQDTVNAIAELTHSVLEKTPPELSADIADKG
FT                   IIMTGGGALLSGLSDLIESVNKVPVHIAENPVSCVAEGTGKMLEYLDKMGISESGDGLN
FT                   LL"
FT   CDS_pept        complement(198500..199024)
FT                   /transl_table=11
FT                   /locus_tag="CBO0164"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum spore protease
FT                   gpr related protein, yyac b.subtilis ortholog cac2857
FT                   SWALL:Q97F84 (EMBL:AE007783) (188 aa) fasta scores: E():
FT                   4e-36, 59.06 38d in 171 aa"
FT                   /db_xref="InterPro:IPR009665"
FT                   /db_xref="InterPro:IPR023430"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY60"
FT                   /protein_id="CAL81719.1"
FT                   /translation="MNIEKIHYMESLSYYKIANTLKNYLNKDTIIICIGTDRCIGDCLG
FT                   PLVGTILRYKNIPLKLYGTLDEPIHALNIEKTIKNIKNSYPNSSIIGIDACLGDKDNIG
FT                   QIQVRNFPIQPGKGVGKTLPKVGDCSIVGIVDSNENCDIFTSANTRLSLILNIAKVIAN
FT                   SILQCCYILDI"
FT   CDS_pept        complement(199073..199795)
FT                   /transl_table=11
FT                   /locus_tag="CBO0165"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani ATPase of the pp-loop
FT                   superfamily ctc00320 SWALL:Q898W8 (EMBL:AE015937) (236 aa)
FT                   fasta scores: E(): 5.2e-62, 64.4 38d in 236 aa"
FT                   /db_xref="GOA:A5HY61"
FT                   /db_xref="InterPro:IPR011063"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR035107"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY61"
FT                   /protein_id="CAL81720.1"
FT                   /translation="MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQ
FT                   SFSPEKFDLIAITLDTMTGADFSPLENVCSNINVPLYIYKTPIKEIVFDLRKEKNPCSL
FT                   CANLRRGALNNYSKKLGCNKIALGHHKNDAIETLLMSMLYEGRVSCFSPKTYLNKANIT
FT                   IIRPMIYIDEIAIKSMIKRYDLPIIKNPCPANGNTKRQYMKELTYTLEKDIPKVKDRLL
FT                   GCLTNINQINLWDKDKIQ"
FT   misc_feature    complement(199115..199729)
FT                   /note="Pfam match to entry PF01171 ATP_bind3, PP-loop
FT                   family, score 62.7, E-value 8.5e-16"
FT                   /inference="protein motif:Pfam:PF01171"
FT   tRNA            200023..200098
FT                   /gene="tRNA Thr (TGT)"
FT                   /note="Cove score 90.80"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            200104..200188
FT                   /gene="tRNA Tyr (GTA)"
FT                   /note="Cove score 60.97"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            200202..200277
FT                   /gene="tRNA Val (TAC)"
FT                   /note="Cove score 90.83"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            200295..200370
FT                   /gene="tRNA Thr (TGT)"
FT                   /note="Cove score 88.90"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            200376..200460
FT                   /gene="tRNA Tyr (GTA)"
FT                   /note="Cove score 60.97"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   misc_binding    200595..200696
FT                   /gene="metK"
FT                   /gene_synonym="metE"
FT                   /locus_tag="CBO0168"
FT                   /bound_moiety="S-adenosyl methionine"
FT                   /note="S_box leader"
FT   CDS_pept        200776..201951
FT                   /transl_table=11
FT                   /gene="metK"
FT                   /gene_synonym="metE"
FT                   /locus_tag="CBO0168"
FT                   /product="S-adenosylmethionine synthetase"
FT                   /EC_number="2.5.1.6"
FT                   /note="Similar to Bacillus subtilis S-adenosylmethionine
FT                   synthetase MetK or MetE or bsu30550 SWALL:METK_BACSU
FT                   (SWALL:P54419) (400 aa) fasta scores: E(): 8.8e-109,74.93
FT                   38d in 391 aa, and to Clostridium acetobutylicum
FT                   S-adenosylmethionine synthetase MetK or cac2856
FT                   SWALL:METK_CLOAB (SWALL:Q97F85) (391 aa) fasta scores: E():
FT                   6.1e-124, 84.39 38d in 391 aa"
FT                   /db_xref="GOA:A5HY62"
FT                   /db_xref="InterPro:IPR002133"
FT                   /db_xref="InterPro:IPR022628"
FT                   /db_xref="InterPro:IPR022629"
FT                   /db_xref="InterPro:IPR022630"
FT                   /db_xref="InterPro:IPR022631"
FT                   /db_xref="InterPro:IPR022636"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY62"
FT                   /protein_id="CAL81721.1"
FT                   /translation="MRKLFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAV
FT                   TTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAM
FT                   GVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKN
FT                   GTLPYLRPDGKTQVTVEYENGKPVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPS
FT                   ELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDR
FT                   SAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNK
FT                   VFDLRPGAIIRDLDLRRPIYKQVAAYGHFGRTDIDVPWERLDKVEEIKKHI"
FT   misc_feature    200776..201078
FT                   /note="Pfam match to entry PF00438
FT                   S-AdoMet_synt,S-adenosylmethionine synthetase, N-terminal
FT                   domain, score 202.7, E-value 6e-58"
FT                   /inference="protein motif:Pfam:PF00438"
FT   misc_feature    201136..201492
FT                   /note="Pfam match to entry PF02772
FT                   S-AdoMet_syntD2,S-adenosylmethionine synthetase, central
FT                   domain, score 286.4, E-value 3.9e-83"
FT                   /inference="protein motif:Pfam:PF02772"
FT   misc_feature    201145..201177
FT                   /note="PS00376 S-adenosylmethionine synthetase signature
FT                   1."
FT                   /inference="protein motif:ProSite:PS00376"
FT   misc_feature    201496..201915
FT                   /note="Pfam match to entry PF02773
FT                   S-AdoMet_syntD3,S-adenosylmethionine synthetase, C-terminal
FT                   domain, score 291.3, E-value 1.2e-84"
FT                   /inference="protein motif:Pfam:PF02773"
FT   misc_feature    201574..201600
FT                   /note="PS00377 S-adenosylmethionine synthetase signature
FT                   2."
FT                   /inference="protein motif:ProSite:PS00377"
FT   CDS_pept        202142..204376
FT                   /transl_table=11
FT                   /locus_tag="CBO0169"
FT                   /product="putative DNA-interacting protein"
FT                   /note="Similar to Clostridium tetani exodeoxyribonuclease v
FT                   alpha chain ctc00322 SWALL:Q898W6 (EMBL:AE015937) (743 aa)
FT                   fasta scores: E(): 1.3e-187, 68.18 38d in 745 aa"
FT                   /db_xref="GOA:A5HY63"
FT                   /db_xref="InterPro:IPR003583"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR006345"
FT                   /db_xref="InterPro:IPR010994"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR027785"
FT                   /db_xref="InterPro:IPR029493"
FT                   /db_xref="InterPro:IPR041451"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY63"
FT                   /protein_id="CAL81722.1"
FT                   /translation="MQEIQGFIEDILFKNDENGYVVAKIRKKKELITIVGCMPYITEGQ
FT                   NLKLKGEWVIHPQFGNQFKVEICEEIVPDTVAGIERYLSSGIISGIGPVTAKKIVKKFG
FT                   EETLNILDNNIERLTEIEGIGKKKIEVIYDSYIKQNEVRNIMMFFQNYGVTPNQCMKVY
FT                   KRFGENSISIVKENPYILTEEIRGIGFKTADKIARSLGIASNSPFRIQSGINYIINGFC
FT                   SLGNTYMPLEKLISEAMDILGVKEEEIHENIYNNVAENKLKIEKVKERSCVFTLPYYYC
FT                   ELGVTKKILSLSLSQYDNLNINIEDEIVRFEKNNNIKFHDSQREAIKGALENGVEIITG
FT                   GPGTGKTTIINCITEIFEKANMKVYMAAPTGRAAKRMSETTGREAKTIHRMLEMGVSED
FT                   DTEEVFSKGEETPLECDVVIIDEASMIDIILMNTLLKAIALGTRIIIVGDVDQLPSVGP
FT                   GNVLRDLIESKCVKVVRLKEIFRQSKESMIIVNAHRINDGEMPIINKKDKDFYFIECSE
FT                   PKKIVNTLLELSNRRLPKFNKSWHKIHDIQILSPMRKGILGVSSLNKELQSVLNPKNDS
FT                   KKEMEFKDYIFRVGDKVMQTKNNYSLKWTRASGEGEAEGLGIFNGDVGYIEDIDEEKET
FT                   IQVLFDNERRVVYENLYLDEIDLAYAVTIHKSQGSEFPVVIMPAFKGPPLLMNRNLLYT
FT                   GITRAKRLVVLVGSLKAINFMVQNDKIFERYSLLKWRISNILDTEIINGE"
FT   misc_feature    202403..202447
FT                   /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix
FT                   motif, score 6.5, E-value 0.49"
FT                   /inference="protein motif:Pfam:PF00633"
FT   misc_feature    202457..202546
FT                   /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix
FT                   motif, score 14.8, E-value 0.0019"
FT                   /inference="protein motif:Pfam:PF00633"
FT   misc_feature    202688..202738
FT                   /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix
FT                   motif, score 2.0, E-value 10"
FT                   /inference="protein motif:Pfam:PF00633"
FT   misc_feature    203159..203182
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        204402..205424
FT                   /transl_table=11
FT                   /locus_tag="CBO0170"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00323 SWALL:Q898W5 (EMBL:AE015937) (354 aa) fasta
FT                   scores: E(): 9.6e-44, 38.26 38d in 345 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY64"
FT                   /protein_id="CAL81723.1"
FT                   /translation="MSLLKRSKKEYEVNEFSEIILNWCKGREKFLNVISMPYNTTDFFV
FT                   DSILYLIKNRNNILYITNEKEKSIDIIQNIKKRSDFRQYSYIKKSRLDIISNLKVTNFN
FT                   VAFNMNEKFDFIIYDDLSSYANHNKDSIKDLILSKLTNEGKCIMYSIESLFPHSRSICI
FT                   PFKKDRMPIIEPRTLLTRINISNEIPFIIYDYMKWSFRSKRKVIIYTPSYFISENLYNY
FT                   FQNYINKIDVNIILDMELGSSKSLFNFEKMKEGVFITHLFYHEFSKLKDTDLIIYGSDK
FT                   NKFNYKELIYLCGTIGRGEYDFKGEIIFLANMETVHMEKAKNIIRSFNKEAWELGFLTI
FT                   "
FT   CDS_pept        205451..206074
FT                   /transl_table=11
FT                   /locus_tag="CBO0171"
FT                   /product="putative phosphoribosyl transferase"
FT                   /note="Similar to Haemophilus influenzae competence protein
FT                   F ComF or hi0434 SWALL:COMF_HAEIN (SWALL:P31773) (229 aa)
FT                   fasta scores: E(): 4.7e-05, 25.83 38d in 209 aa,and to
FT                   Clostridium acetobutylicum predicted
FT                   amidophosphoribosyltransferase, ComC b.suntilis ortholog
FT                   cac2852 SWALL:Q97F89 (EMBL:AE007783) (226 aa) fasta scores:
FT                   E(): 6.3e-31, 46.63 38d in 208 aa"
FT                   /db_xref="GOA:A5HY65"
FT                   /db_xref="InterPro:IPR000836"
FT                   /db_xref="InterPro:IPR029057"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY65"
FT                   /protein_id="CAL81724.1"
FT                   /translation="MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCF
FT                   PAFPTCYYSGIMMELILNLKYKGDFKSGEVIANLMCKKVKEVNINTDIITFVPSSKKSY
FT                   KKRGYNQSEYLAKIISKNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYNEKC
FT                   IKNKKVLLIDDVLTTGATSFYCANELKKRGAKEIFILTAAKSDV"
FT   misc_feature    205940..206056
FT                   /note="Pfam match to entry PF00156
FT                   Pribosyltran,Phosphoribosyl transferase domain, score 31.1,
FT                   E-value 7.4e-09"
FT                   /inference="protein motif:Pfam:PF00156"
FT   misc_feature    205955..205993
FT                   /note="PS00103 Purine/pyrimidine phosphoribosyl
FT                   transferases signature."
FT                   /inference="protein motif:ProSite:PS00103"
FT   CDS_pept        206499..207026
FT                   /transl_table=11
FT                   /locus_tag="CBO0172"
FT                   /product="putative sigma 54 modulation protein/S30EA
FT                   ribosomal protein"
FT                   /note="Similar to Synechococcus sp. light repressed protein
FT                   A LrtA SWALL:LRTA_SYNP2 (SWALL:P47908) (192 aa) fasta
FT                   scores: E(): 4.8e-13, 35.97 38d in 189 aa, and to
FT                   Clostridium tetani ssu ribosomal protein S30P ctc00325
FT                   SWALL:Q898W3 (EMBL:AE015937) (176 aa) fasta scores: E():
FT                   1.5e-47, 75.56 38d in 176 aa"
FT                   /db_xref="GOA:A5HY66"
FT                   /db_xref="InterPro:IPR003489"
FT                   /db_xref="InterPro:IPR032528"
FT                   /db_xref="InterPro:IPR034694"
FT                   /db_xref="InterPro:IPR036567"
FT                   /db_xref="InterPro:IPR038416"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY66"
FT                   /protein_id="CAL81725.1"
FT                   /translation="MKITVIGKNIEITNALRETVEKKLSKLERFFNPDVVATATLSVHK
FT                   NKQTIEVTIPFHGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTKLQRKIHDGSLRFQ
FT                   YIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRR
FT                   KDGNYGLIEPEF"
FT   misc_feature    206502..206783
FT                   /note="Pfam match to entry PF02482 Ribosomal_S30AE, Sigma
FT                   54 modulation protein / S30EA ribosomal protein, score
FT                   97.7, E-value 2.4e-26"
FT                   /inference="protein motif:Pfam:PF02482"
FT   CDS_pept        207254..209761
FT                   /transl_table=11
FT                   /gene="secA"
FT                   /gene_synonym="div+"
FT                   /locus_tag="CBO0173"
FT                   /product="preprotein translocase subunit"
FT                   /note="Similar to Bacillus subtilis preprotein translocase
FT                   SecA subunit SecA or Div+ or bsu35300 SWALL:SECA_BACSU
FT                   (SWALL:P28366) (841 aa) fasta scores: E(): 2e-163, 55.3 id
FT                   in 839 aa, and to Clostridium tetani protein translocase
FT                   subunit SecA or ctc00327 SWALL:Q898W1 (EMBL:AE015937) (841
FT                   aa) fasta scores: E(): 0, 80.33 38d in 834 aa"
FT                   /db_xref="GOA:A5HY67"
FT                   /db_xref="InterPro:IPR000185"
FT                   /db_xref="InterPro:IPR004027"
FT                   /db_xref="InterPro:IPR011115"
FT                   /db_xref="InterPro:IPR011116"
FT                   /db_xref="InterPro:IPR011130"
FT                   /db_xref="InterPro:IPR014018"
FT                   /db_xref="InterPro:IPR020937"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR036266"
FT                   /db_xref="InterPro:IPR036670"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY67"
FT                   /protein_id="CAL81726.1"
FT                   /translation="MGILNKIFGTYSERELRRVNPIVNKIEALDEKMQSLKDEDFKLKT
FT                   EEFKSRLEKGEKLDDILPEAFALVREAAHRTIGLKHYREQLIGGVVLHQGRIGEMKTGE
FT                   GKTLVATLPAYVNALTGKGVHIVTVNDYLAKRDRDLMAPVYEFLGLKVGVILHNLNNEE
FT                   RQEAYGSDITYGTNSEFGFDYLRDNMVVYKEERVQRKLNFSIVDEVDSILIDEARTPLI
FT                   ISGQGEKSTEFYKVADYFTKSLIAEKDFTIDEKANSAMLTDEGVNKAENFFKVDNYADA
FT                   ENMEIQHHVVQALKANYVMKKDKDYMIKDGEILIVDEFTGRAMEGRRYSDGLHQAIEAK
FT                   EGVRVERESKTLATITYQNYFRMYNKLSGMTGTAQTEENEFREIYGLDVIVIPTHEPIA
FT                   RIDNADVVYKSEKGKFKAIVDEIVERYKKGQPMLVGTVSIEKSEMLSSMLKKKGVPHQV
FT                   LNAKYHEKEAEIISHAGEYGMVTIATNMAGRGTDIKLTKEAEEAGGLMIIGTERHESRR
FT                   IDNQLRGRSGRQGDPGESRFFVSLEDDLMRIFGSERIQGIVDKLGLAEDEAIESKMVSS
FT                   AIESAQKKVEGNNFDIRKTLLQYDDVINKQREIIYKQRSEVLEGEDLKDQIRDMIRDVV
FT                   YTAVNSHISGVEEEFQTELQNLVNYLEDICLPKALVKVKDISNLSDEEIKEKLLEAVEN
FT                   IYIRKEKEIGEEQIREIERVILLRVVDTKWMDHIDDMDHLKQGIGLRAYRQQDPVQAYQ
FT                   FEGSEMFEEMIYNIKVDTVRYLFHVEVEKAPEREKVAKETSTNYDEDSVKKQPIKKENR
FT                   IGRNDMCPCGSGKKYKNCCGRMA"
FT   misc_feature    207263..208507
FT                   /note="Pfam match to entry PF01043 SecA_protein, SecA
FT                   protein, amino terminal region, score 921.7, E-value
FT                   2.1e-274"
FT                   /inference="protein motif:Pfam:PF01043"
FT   misc_feature    208691..208738
FT                   /note="PS01312 Protein secA signatures."
FT                   /inference="protein motif:ProSite:PS01312"
FT   misc_feature    209696..209758
FT                   /note="Pfam match to entry PF02810 SEC-C, SEC-C motif,score
FT                   41.5, E-value 2e-09"
FT                   /inference="protein motif:Pfam:PF02810"
FT   repeat_region   209822..209854
FT                   /rpt_family="CB.399"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="acattcaaataaataacaagtcagtatgacagt"
FT                   /inference="ab initio prediction:REPuter"
FT   repeat_region   complement(209926..209970)
FT   CDS_pept        210125..211102
FT                   /transl_table=11
FT                   /gene="prfB"
FT                   /locus_tag="CBO0175"
FT                   /product="peptide chain release factor 2"
FT                   /note="Similar to Bacillus subtilis peptide chain release
FT                   factor 2 PrfB or bsu35290 SWALL:RF2_BACSU (SWALL:P28367)
FT                   (366 aa) fasta scores: E(): 7e-66, 53.06 38d in 326 aa,and
FT                   to Clostridium tetani bacterial peptide chain release
FT                   factor 2 ctc00328 SWALL:Q898W0 (EMBL:AE015937) (325 aa)
FT                   fasta scores: E(): 2.9e-87, 70.15 38d in 325 aa"
FT                   /db_xref="GOA:A5HY68"
FT                   /db_xref="InterPro:IPR000352"
FT                   /db_xref="InterPro:IPR004374"
FT                   /db_xref="InterPro:IPR005139"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY68"
FT                   /protein_id="CAL81727.1"
FT                   /translation="MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCE
FT                   MLSEEDDDMKKEIISEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWT
FT                   DMLFRMYTRWAEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRI
FT                   SPFNANGKRQTSFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRI
FT                   THMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQ
FT                   IRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINIFITQYLKGNF"
FT   misc_feature    210248..210586
FT                   /note="Pfam match to entry PF03462 PCRF, PCRF domain,score
FT                   171.7, E-value 1.3e-48"
FT                   /inference="protein motif:Pfam:PF03462"
FT   misc_feature    210680..211015
FT                   /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA
FT                   hydrolase domain, score 227.1, E-value 2.6e-65"
FT                   /inference="protein motif:Pfam:PF00472"
FT   misc_feature    210734..210784
FT                   /note="PS00745 Prokaryotic-type class I peptide chain
FT                   release factors signature."
FT                   /inference="protein motif:ProSite:PS00745"
FT   CDS_pept        complement(211223..212587)
FT                   /transl_table=11
FT                   /locus_tag="CBO0176"
FT                   /product="aminopeptidase"
FT                   /note="Similar to Bacillus licheniformis leucine
FT                   aminopeptidase precursor SWALL:Q93EJ5 (EMBL:AF358651) (449
FT                   aa) fasta scores: E(): 9.2e-10, 26.85 38d in 417 aa, and to
FT                   Clostridium acetobutylicum protein containing
FT                   aminopeptidase domain cac2843 SWALL:Q97F97 (EMBL:AE007782)
FT                   (449 aa) fasta scores: E(): 9.1e-79, 48.59 38d in 428 aa"
FT                   /db_xref="GOA:A5HY69"
FT                   /db_xref="InterPro:IPR007484"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY69"
FT                   /protein_id="CAL81728.1"
FT                   /translation="MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSN
FT                   EFKGRLPGSIENRQVSEYIKDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQ
FT                   GNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDYGSN
FT                   FRSSFVKEAPYNMYIVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGIN
FT                   PNNDPIIISSHFDHLGEDLNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSF
FT                   NAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELS
FT                   VLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRC
FT                   YNVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL"
FT   misc_feature    complement(order(211280..211348,212510..212569))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0176 by TMHMM2.0 at aa 7-26 and 414-436"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(211334..211996)
FT                   /note="Pfam match to entry PF04389 Peptidase_M28,Peptidase
FT                   family M28, score 144.9, E-value 1.5e-40"
FT                   /inference="protein motif:Pfam:PF04389"
FT   sig_peptide     complement(212497..212587)
FT                   /locus_tag="CBO0176"
FT                   /note="probabilty 0.715, with cleavage site probability
FT                   0.445 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        212695..214851
FT                   /transl_table=11
FT                   /locus_tag="CBO0177"
FT                   /product="putative RNA binding protein"
FT                   /note="Similar to Clostridium tetani transcription
FT                   accessory protein ctc00330 SWALL:Q898V8 (EMBL:AE015937)
FT                   (718 aa) fasta scores: E(): 7.4e-199, 77.99 38d in 718 aa"
FT                   /db_xref="GOA:A5HY70"
FT                   /db_xref="InterPro:IPR003029"
FT                   /db_xref="InterPro:IPR006641"
FT                   /db_xref="InterPro:IPR010994"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="InterPro:IPR018974"
FT                   /db_xref="InterPro:IPR022967"
FT                   /db_xref="InterPro:IPR023319"
FT                   /db_xref="InterPro:IPR023323"
FT                   /db_xref="InterPro:IPR032639"
FT                   /db_xref="InterPro:IPR037027"
FT                   /db_xref="InterPro:IPR041692"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY70"
FT                   /protein_id="CAL81729.1"
FT                   /translation="MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGG
FT                   MSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGKLTEELKTSIINCKTVTEVEDLYRP
FT                   YRPKRRTRATIAEEKGLKPLAEIILEGNFKEDIKVYASEFINEEKEVKTIEEALQGAMD
FT                   IISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAI
FT                   NRGEKEKILTAKVTCNEDKIIDYLKSRSLKGNKETDVYIEESVKDSLKRLIYPSIEREI
FT                   RSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDPGFRTGCKIAVLDETGKLLDT
FT                   ATVYATAPQNDVEGSIKVLKKLIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGK
FT                   DIYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISICRRLQDPLAELVKIDPKSIGV
FT                   GQYQHDVSQKKLDESLKGVVEDCVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREE
FT                   IGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVHPESYEGTKKFLSLLQY
FT                   DIKDVKNNKLQDIDDRVNNIGLDDICNKIDIGKPTLLDIIKEIKKPGRDPREDLPKPIL
FT                   KTGIVDITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDRFVKHPLDIVKV
FT                   GDIVEVRILEVDKKRNRISLSMKK"
FT   misc_feature    214624..214845
FT                   /note="Pfam match to entry PF00575 S1, S1 RNA binding
FT                   domain, score 102.0, E-value 1.2e-27"
FT                   /inference="protein motif:Pfam:PF00575"
FT   misc_RNA        214923..215039
FT                   /locus_tag="CBO0178"
FT                   /note="RFN element"
FT   CDS_pept        215135..215728
FT                   /transl_table=11
FT                   /locus_tag="CBO0178"
FT                   /product="putative riboflavin transporter"
FT                   /note="Similar to Clostridium tetani riboflavin transporter
FT                   ctc00331 SWALL:Q898V7 (EMBL:AE015937) (204 aa) fasta
FT                   scores: E(): 5.7e-43, 61.02 38d in 195 aa"
FT                   /db_xref="GOA:A5HY71"
FT                   /db_xref="InterPro:IPR024529"
FT                   /db_xref="InterPro:IPR025720"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY71"
FT                   /protein_id="CAL81730.1"
FT                   /translation="MKSSKLNKLVKISVLGTIGFLLMFIEIPIPIFPEFLKIDISDIPA
FT                   LVGGFALGPVAGILIEFMKNILHGIFKGSTVFVGEIANFLVGSVLVGISAYIYKRDKTK
FT                   KGAIVGLAIGAICMSIVAGILNYYVLLPLYEKALNFPIKAIVAIGNKLNPKIVDLKSFI
FT                   FWSIIPFNLLKGVVVSLITAAIYKNVSPILHERK"
FT   sig_peptide     215135..215255
FT                   /locus_tag="CBO0178"
FT                   /note="probabilty 0.794, with cleavage site probability
FT                   0.308 between residues 41 and 42"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(215168..215227,215255..215323,215360..215428,
FT                   215456..215524,215621..215689)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0178 by TMHMM2.0 at aa 12-31, 41-63, 76-98, 108-130 and
FT                   163-185"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        216139..217788
FT                   /transl_table=11
FT                   /locus_tag="CBO0179"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00333 SWALL:Q898V6 (EMBL:AE015937) (511 aa) fasta
FT                   scores: E(): 8.9e-30, 40.51 38d in 548 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY72"
FT                   /protein_id="CAL81731.1"
FT                   /translation="MPSISNINNVYSNNTKKISSKISFEIDQIFAAKVVGEGVSPEEVI
FT                   LKLMDGWQFKASIEDLKGKLPDGLLKFKVLGFEEGKLILKFLEGNLVEGQQKEQNPIEE
FT                   LLLKENIKLNKEDYVLLEKMIKHNIPLTKDNILKVVNLSNFMGKLKNSPQEGDSFIQNY
FT                   IKGKGMDLRSAKGQEINNVLKGLFNELQTLTEEDLFILLENNVELTEENVKAFKEVFKE
FT                   SSVYNKVNNINKELNKSSIDNKQIITEKNTSNGDTLVKENLQSTEMESAINNKSENVVK
FT                   NELISTFKTLMATGKEENISIVRDLILEEKDINGILKNFTKEEQEMLGLKPKTEDTEAT
FT                   EQSLTSETTKNIKTKPIEVLANKGQVDSSSIKEQINSKTNEIKDIVKNLIDTLKDTNNS
FT                   SYDKIIGTLKNNINNFKMFNTISNEYYYLDLPLNFKENECDCKIIIKDERGKGKKIDSS
FT                   NVKIATSISTANMDIVDAYITLKNSNMEINIKTIKEWVNLLDKGKNKLIEDMSSMGYNI
FT                   FIKVEEKAEIFNISNCREFFNDNNLNAIDIKA"
FT   CDS_pept        217800..218069
FT                   /transl_table=11
FT                   /locus_tag="CBO0180"
FT                   /product="putative protein exporter"
FT                   /note="Similar to Bacillus subtilis YlqH protein ylqH
FT                   SWALL:O34867 (EMBL:AJ000975) (93 aa) fasta scores: E():
FT                   1.6e-07, 38.55 38d in 83 aa, and to Clostridium
FT                   acetobutylicum flagellar biosynthesis related protein
FT                   cac0639 SWALL:Q97LC3 (EMBL:AE007579) (90 aa) fasta scores:
FT                   E(): 2.2e-17, 65 38d in 80 aa"
FT                   /db_xref="GOA:A5HY73"
FT                   /db_xref="InterPro:IPR006135"
FT                   /db_xref="InterPro:IPR029025"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY73"
FT                   /protein_id="CAL81732.1"
FT                   /translation="MVILNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKV
FT                   PIVYDKELANLLTNIDIGDSIPYELYDAVAKVIAYVMEIDERIK"
FT   misc_feature    217833..218045
FT                   /note="Pfam match to entry PF01312 Bac_export_2, FlhB HrpN
FT                   YscU SpaS Family, score 37.0, E-value 6.3e-11"
FT                   /inference="protein motif:Pfam:PF01312"
FT   CDS_pept        218083..218769
FT                   /transl_table=11
FT                   /locus_tag="CBO0181"
FT                   /product="putative phosphoesterase"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0653 cpe0653 SWALL:Q8XMN5 (EMBL:AP003187) (230
FT                   aa) fasta scores: E(): 3.1e-64, 67.54 38d in 228 aa"
FT                   /db_xref="GOA:A5HY74"
FT                   /db_xref="InterPro:IPR004843"
FT                   /db_xref="InterPro:IPR014578"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY74"
FT                   /protein_id="CAL81733.1"
FT                   /translation="MSLYAISDLHLAFNEDKPMDIFGDKWFMHHERIKENWENKITKDD
FT                   TVLIAGDISWSMKIEEGLHDLEWIHNLKGRKILIKGNHDYWWSSINKLNKLYEDMNFIQ
FT                   NNFFVYENYAICGTRGWNPKPSDNFTAHDEKIYRRELIRLRLSLDAAKKAGMEKFIVML
FT                   HYPATNDKFEDSPITELLKEYNVEKVIYGHLHGISTTRSLEGLRDGVEYYLTSCDHINF
FT                   DPVKIT"
FT   misc_feature    218083..218673
FT                   /note="Pfam match to entry PF00149
FT                   Metallophos,Calcineurin-like phosphoesterase, score 60.6,
FT                   E-value 3.5e-15"
FT                   /inference="protein motif:Pfam:PF00149"
FT   CDS_pept        218853..219134
FT                   /transl_table=11
FT                   /locus_tag="CBO0182"
FT                   /product="ArsR-family transcriptional regulator"
FT                   /note="Similar to Bacillus anthracis transcriptional
FT                   repressor PagR or TcrA or Pxo1-109 SWALL:PAGR_BACAN
FT                   (SWALL:O31178) (99 aa) fasta scores: E(): 8e-09, 41.37 38d
FT                   in 87 aa, and to Bacillus cereus transcriptional regulator,
FT                   ArsR family bc4256 SWALL:Q818J4 (EMBL:AE017011) (96 aa)
FT                   fasta scores: E(): 4.6e-16, 63.09 38d in 84 aa"
FT                   /db_xref="GOA:A5HY75"
FT                   /db_xref="InterPro:IPR001845"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY75"
FT                   /protein_id="CAL81734.1"
FT                   /translation="MDNDYAKYNDIAELLKVLAHPVRICIVKGLLEKGECNVSHMQNCL
FT                   DMPQSTISQHLQKLKSAGIIEGDRNGLQINYHVSNKKAEQLIEILLNE"
FT   misc_feature    218895..219131
FT                   /note="Pfam match to entry PF01022 HTH_5, Bacterial
FT                   regulatory protein, arsR family, score 43.7, E-value
FT                   4.4e-10"
FT                   /inference="protein motif:Pfam:PF01022"
FT   misc_feature    218958..219023
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1129.000, SD 3.03 at aa 36-57, sequence
FT                   CNVSHMQNCLDMPQSTISQHLQ"
FT   CDS_pept        219174..221627
FT                   /transl_table=11
FT                   /locus_tag="CBO0183"
FT                   /product="putative pyridine nucleotide-disulphide
FT                   oxidoreductase"
FT                   /note="Similar to Fusobacterium nucleatum coenzyme a
FT                   disulfide reductase/ disulfide bond regulator domain fn1903
FT                   SWALL:Q8RHU1 (EMBL:AE010492) (810 aa) fasta scores: E():
FT                   1e-163, 56.35 38d in 818 aa, and to Fusobacterium nucleatum
FT                   subsp. vincentii ATCC 49256 coenzyme a disulfide reductase/
FT                   disulfide bond regulator domain fnv2089 SWALL:Q7P7P1
FT                   (EMBL:AABF01000012) (809 aa) fasta scores: E(): 2.7e-159,
FT                   55.5 38d in 818 aa"
FT                   /db_xref="GOA:A5HY76"
FT                   /db_xref="InterPro:IPR001455"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="InterPro:IPR004099"
FT                   /db_xref="InterPro:IPR016156"
FT                   /db_xref="InterPro:IPR023753"
FT                   /db_xref="InterPro:IPR027396"
FT                   /db_xref="InterPro:IPR032836"
FT                   /db_xref="InterPro:IPR036188"
FT                   /db_xref="InterPro:IPR036868"
FT                   /db_xref="InterPro:IPR036873"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY76"
FT                   /protein_id="CAL81735.1"
FT                   /translation="MNKKVLIIGGVAGGASAAARLRRLDDNAQIIMFERGEHISFANCG
FT                   LPYYIGETIKERDNLLVQTPEAMMGRFNIDVRVNSEVISINTREKKVKVNSKEKGLYEE
FT                   TYDYIIMSPGATPIKPPIKGINSSKIFTLRNIPDTDRIKDYVDNKDVKSAVVVGGGYIG
FT                   VEMAENLRERGINVVLVEAAPHILAPFDSDMVTFAEQELQDNGVGLILGDGVKSFEENN
FT                   NKIKLSLQSGTELNADMIILAIGVKPDTEFLKGSSIEIGPRGHIIVDKHMKTNVEGIYA
FT                   VGDAIEVVDYINENKTAIPLAGPANKQGRIAADNICELNSSYKGTQGTAIIKVFGLTGA
FT                   STGNNERTLSKFNIPYEVVYTHSQSHASYYPGGTPISLKLIFDTKGKILGAQVFGYDGV
FT                   DKRIDDIAIVIRFGGTIYDLEELELAYAPPYSSAKDPVNMLGFVAENVLTGKVETVLSK
FT                   DIDNRDKDKVILLDVRDDIEIENGKIEGAIEIPINQLRNRLSEIPKDNEVWIYCQIGLR
FT                   GYIAARILMANGYKVKNLNGGYKTYIMNKFIPEKINKMPEEKMKGNNETKEEVAETLEL
FT                   DACGLSCPGPLMKVNNTVSEMNEGETLKVKASDPGFYVDIQSWCERTNNELLSVSKDKG
FT                   IVKALIKKGKEKLQVDEKERKGKIKENDNKTLVVFSGDLDKAIASFVIANGAVAMGKKV
FT                   TMFFTFWGLNILRKPEKTKIQKAFMDKMFASMMPRGSKKLKLSKMNMMGMGSKMIRKVM
FT                   KNKNISSLEELIQSAIDSGINIVACQMSMDVMGIKEEELIDGVNIGGVGYYLGEAEDAN
FT                   VNLFI"
FT   sig_peptide     219174..219222
FT                   /locus_tag="CBO0183"
FT                   /note="probabilty 0.871, with cleavage site probability
FT                   0.703 between residues 22 and 23"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    219183..220052
FT                   /note="Pfam match to entry PF00070 pyr_redox, Pyridine
FT                   nucleotide-disulphide oxidoreductase, score 274.1, E-value
FT                   1.9e-79"
FT                   /inference="protein motif:Pfam:PF00070"
FT   misc_feature    220158..220487
FT                   /note="Pfam match to entry PF02852 pyr_redox_dim, Pyridine
FT                   nucleotide-disulphide oxidoreductase, dimerisation
FT                   domain,score 41.2, E-value 2.4e-09"
FT                   /inference="protein motif:Pfam:PF02852"
FT   misc_feature    220527..220808
FT                   /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like
FT                   domain, score 46.6, E-value 5.9e-11"
FT                   /inference="protein motif:Pfam:PF00581"
FT   misc_feature    220887..221102
FT                   /note="Pfam match to entry PF01206 UPF0033,Uncharacterized
FT                   protein family UPF0033, score 48.2,E-value 1.9e-11"
FT                   /inference="protein motif:Pfam:PF01206"
FT   misc_feature    220899..220937
FT                   /note="PS01148 Uncharacterized protein family UPF0033
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01148"
FT   CDS_pept        complement(221655..222509)
FT                   /transl_table=11
FT                   /locus_tag="CBO0184"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein cac0641 SWALL:Q97LC1
FT                   (EMBL:AE007579) (264 aa) fasta scores: E(): 2.5e-49,52.98
FT                   38d in 251 aa"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR018708"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY77"
FT                   /protein_id="CAL81736.1"
FT                   /translation="MNYNESYENNSKDWPIYKENSAEWLKEKSLLYDREVTCPVCGNIF
FT                   KAKSIKTSSYRILKKDSDLFIRYSVINPYFYDVWVCNECGYAAMKRDFNKIRSFQINSV
FT                   KEKITPTWIPKVYPEVYNIDIAIERFKLSLLNYVVIESPYSKKGFNSLKLAWMYRLKDD
FT                   YEKEKLFLNEALESLKEAYSSEDFPIYGMDRYTAMYLIAELMRKAGNTEESLRWFSNVI
FT                   TCPGISSRLKNLARDQKDLIKEEINEIDFTPIDPTPMEIDEIDNTKPQKGFLSRFLNKI
FT                   KIL"
FT   misc_feature    complement(221754..222425)
FT                   /note="Pfam match to entry PF04460 DUF517, Protein of
FT                   unknown function (DUF517), score 221.4, E-value 1.4e-63"
FT                   /inference="protein motif:Pfam:PF04460"
FT   CDS_pept        222666..223454
FT                   /transl_table=11
FT                   /locus_tag="CBO0185"
FT                   /product="putative guanosine 3',5'-bis-pyrophosphate
FT                   (ppGpp) synthesis/degradation protein"
FT                   /note="Similar to Clostridium tetani GTP pyrophosphokinase
FT                   ctc00336 SWALL:Q898V3 (EMBL:AE015937) (262 aa) fasta
FT                   scores: E(): 8.5e-70, 77.86 38d in 262 aa"
FT                   /db_xref="GOA:A5HY78"
FT                   /db_xref="InterPro:IPR007685"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY78"
FT                   /protein_id="CAL81737.1"
FT                   /translation="MALGEWKTFLIPYKQAVEELKVKFRSIRKEYREKNEYSPIEFVTG
FT                   RVKEISSILEKANKFNIPLDRISYEMEDIAGIRIMCQFTSDIEKVVELVRQRKDMQIIY
FT                   EKDYITNVKNSGYRSYHMIIKYPVSMAEGQKEILAEFQIRTLAMNFWATIEHSLNYKYK
FT                   HQIPKDIKLKLKSAADAASNLDKLMMEIKDEIKDAQKLFEVKSSLVSYIMDNILTLQSM
FT                   GKIIDSNRYQEQLNKLIEEGEVFELNSLLKSTEKTIEMYK"
FT   misc_feature    222798..223157
FT                   /note="Pfam match to entry PF04607 RelA_SpoT, Region found
FT                   in RelA / SpoT proteins, score 186.6, E-value 4.2e-53"
FT                   /inference="protein motif:Pfam:PF04607"
FT   repeat_region   223523..223680
FT                   /note="possible intergenic repeat 2"
FT   CDS_pept        complement(223757..226198)
FT                   /transl_table=11
FT                   /gene="leuS"
FT                   /locus_tag="CBO0186"
FT                   /product="leucyl-tRNA synthetase"
FT                   /EC_number="6.1.1.4"
FT                   /note="Similar to Escherichia coli leucyl-tRNA synthetase
FT                   LeuS or b0642 SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta
FT                   scores: E(): 4.7e-104, 40.67 38d in 858 aa, and to
FT                   Clostridium tetani leucyl-tRNA synthetase LeuSor ctc00337
FT                   SWALL:SYL_CLOTE (SWALL:Q898V2) (812 aa) fasta scores: E():
FT                   0, 76.26 38d in 813 aa"
FT                   /db_xref="GOA:A5HY79"
FT                   /db_xref="InterPro:IPR002300"
FT                   /db_xref="InterPro:IPR002302"
FT                   /db_xref="InterPro:IPR009008"
FT                   /db_xref="InterPro:IPR009080"
FT                   /db_xref="InterPro:IPR013155"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR015413"
FT                   /db_xref="InterPro:IPR025709"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HY79"
FT                   /protein_id="CAL81738.1"
FT                   /translation="MGNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGS
FT                   KLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAIKTGIHPKDSTFKNI
FT                   ETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPSCNT
FT                   VLANEQVLDGKCERCDSNVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWI
FT                   GKSVGAEVTFNVADSDLSFNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESY
FT                   KTQAKNQSDIERQSITREKTGVFSGSYAINPINGKKVPIWIGDYVLNTYGTGCVMAVPA
FT                   HDERDFAFATKYNLPIERVIEGGDSLPYTEYGGMVNSGEFDGLLGNEAKEAVISKLESM
FT                   NLGRKKINYRLRDWLVSRQRYWGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGK
FT                   SPLGKCDDFINTTCPKCGGPAKREADTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKM
FT                   LPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMSKS
FT                   KGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIKSIGKFVDRVERILENARE
FT                   EIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEFTNALSKYLGI
FT                   DAIKNALFLRESIIDFITLLAPFAPHFAEEQWKLIGINSSIFNEKWPEFDPKALIKDEV
FT                   EIAVQVNGKIRAKINISTSSSEDEIKESALNNEDIKNSIGDKEIKKVIVIKNRLVNIVA
FT                   K"
FT   misc_feature    complement(224363..226168)
FT                   /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA
FT                   synthetases class I (I, L, M and V), score 457.3, E-value
FT                   1.3e-134"
FT                   /inference="protein motif:Pfam:PF00133"
FT   misc_binding    complement(226272..226492)
FT                   /locus_tag="CBO0187"
FT                   /bound_moiety="tRNA"
FT                   /note="T-box leader"
FT   CDS_pept        complement(226575..226979)
FT                   /transl_table=11
FT                   /locus_tag="CBO0187"
FT                   /product="putative exported protein"
FT                   /note="Similar to Nitrosomonas europaea putative
FT                   transmembrane protein ne2212 SWALL:Q82SU2 (EMBL:BX321863)
FT                   (140 aa) fasta scores: E(): 4.3e-05, 25.83 38d in 120
FT                   aa,and to Pseudomonas aeruginosa hypothetical protein
FT                   Pa5130 pa5130 SWALL:Q9HU54 (EMBL:AE004926) (139 aa) fasta
FT                   scores: E(): 7.6e-05, 29.16 38d in 120 aa"
FT                   /db_xref="GOA:A5HY80"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="InterPro:IPR036873"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY80"
FT                   /protein_id="CAL81739.1"
FT                   /translation="MNSKIREKFLFYSLFVVLLTSILLIPIYSAKAYKNISPEEIKHII
FT                   STPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDKFKDTMLSKNIDKNTKIIIYSNTSVRA
FT                   KNASNLLNSLGFNNVYVLDHLNSWSYPLEY"
FT   misc_feature    complement(226587..226871)
FT                   /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like
FT                   domain, score 55.9, E-value 9e-14"
FT                   /inference="protein motif:Pfam:PF00581"
FT   sig_peptide     complement(226880..226979)
FT                   /locus_tag="CBO0187"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.290 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   tRNA            complement(227165..227239)
FT                   /gene="tRNA Gln (CTG)"
FT                   /note="Cove score 73.28"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        complement(227293..227817)
FT                   /transl_table=11
FT                   /locus_tag="CBO0188"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Staphylococcus epidermidis cell shape
FT                   determinant MreD se1331 SWALL:Q8CNZ6 (EMBL:AE016748) (173
FT                   aa) fasta scores: E(): 0.34, 22.36 38d in 161 aa, and to
FT                   Clostridium tetani heptaprenyl diphosphate synthase
FT                   component I ctc01025 SWALL:Q896H9 (EMBL:AE015939) (181 aa)
FT                   fasta scores: E(): 0.13, 25.97 38d in 154 aa"
FT                   /db_xref="GOA:A5HY81"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY81"
FT                   /protein_id="CAL81740.1"
FT                   /translation="MKTTPLKSSNIAKGGVFTAISFLLIYLSTILPVNKLSLLATASAI
FT                   IPIAIISTNAKNGFLVYLSTSILCSIVVGISRISVIFYIVFFGLYGIIKYYIERLNKLY
FT                   IEIILKFAFFNICLIVLLYIYKLFFQGITIINKYIYMYFIVAQIAFIVFDYVLTLFIFY
FT                   INKHFIKNIKP"
FT   misc_feature    complement(order(227326..227394,227431..227499,
FT                   227542..227610,227629..227697,227725..227793))
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0188 by TMHMM2.0 at aa 9-31, 41-63, 70-92, 107-129 and
FT                   142-164"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(227682..227817)
FT                   /locus_tag="CBO0188"
FT                   /note="probabilty 0.990, with cleavage site probability
FT                   0.761 between residues 44 and 45"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(227842..228441)
FT                   /transl_table=11
FT                   /locus_tag="CBO0189"
FT                   /product="DnaJ-related protein"
FT                   /note="Similar to Clostridium acetobutylicum molecular
FT                   chaperone, DNAJ family cac0648 SWALL:Q97LB4 (EMBL:AE007580)
FT                   (195 aa) fasta scores: E(): 1.6e-36,55.15 38d in 194 aa"
FT                   /db_xref="InterPro:IPR001623"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="InterPro:IPR036869"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY82"
FT                   /protein_id="CAL81741.1"
FT                   /translation="MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQ
FT                   KMREINEAYDYLMKNNNSQSYNSNNYNGSYNSHSSNDYASIRADIDRGNISSAEQKLNS
FT                   INVRNAEWYYLMGRVNYSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSYRKP
FT                   YYSERRSDPDMCKICGTLYCIDCCCECCGGDFISCC"
FT   misc_feature    complement(228232..228438)
FT                   /note="Pfam match to entry PF00226 DnaJ, DnaJ domain,score
FT                   85.4, E-value 1.2e-22"
FT                   /inference="protein motif:Pfam:PF00226"
FT   CDS_pept        complement(228428..229303)
FT                   /transl_table=11
FT                   /locus_tag="CBO0190"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized protein, homolog of thermotoga maritima
FT                   cac0649 SWALL:Q97LB3 (EMBL:AE007580) (283 aa) fasta scores:
FT                   E(): 6.7e-52, 52.51 38d in 278 aa, and to Thermotoga
FT                   maritima hypothetical protein Tm1805 tm1805 SWALL:Q9X2C5
FT                   (EMBL:AE001818) (272 aa) fasta scores: E(): 1.4e-10, 35.03
FT                   38d in 294 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY83"
FT                   /protein_id="CAL81742.1"
FT                   /translation="MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINY
FT                   DMTFLGILLDSLEDNKNIFIKEHCIIHPIKKKVIITDNEALKYAAFFNVALSYYKLLDN
FT                   VEDDNSIKSNISSKFLKKYIYKNNDLYEKHIHTVDNSLKNLYICEKNYENKSIDEISHH
FT                   FAHLTGYILSSYKNFSFKDSLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNK
FT                   NNLNYKEFRDSIKDKIDFLLINCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVL
FT                   KGVNINNESL"
FT   CDS_pept        complement(229307..229846)
FT                   /transl_table=11
FT                   /locus_tag="CBO0191"
FT                   /product="putative adenylate cyclase"
FT                   /note="Similar to Clostridium acetobutylicum adenilate
FT                   cyclase, class2 cac0650 SWALL:Q97LB2 (EMBL:AE007580) (180
FT                   aa) fasta scores: E(): 8.5e-37, 64.77 38d in 176 aa, and to
FT                   Clostridium perfringens hypothetical protein Cpe1352
FT                   cpe1352 SWALL:Q8XKP2 (EMBL:AP003190) (187 aa) fasta scores:
FT                   E(): 6.5e-36, 62.92 38d in 178 aa"
FT                   /db_xref="InterPro:IPR008173"
FT                   /db_xref="InterPro:IPR023577"
FT                   /db_xref="InterPro:IPR033469"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY84"
FT                   /protein_id="CAL81743.1"
FT                   /translation="MKEIETRIIKIDIEEIRKKLLDLGAIKVKEESQINNIYDFSDKKL
FT                   LKNKGYARIRYIKDAIKNEEHYYMTVKKLISQEKYKVMEENETEILDFKEGEHIFKALG
FT                   LELIESISKFRESYKYKETLVEIDINDKSFCPFPYIELESNNEEELEELVELLGYSMND
FT                   TTSKTIYEILNEEKVK"
FT   misc_feature    complement(229322..229846)
FT                   /note="Pfam match to entry PF01928 CYTH, CYTH domain,score
FT                   103.8, E-value 3.6e-28"
FT                   /inference="protein motif:Pfam:PF01928"
FT   CDS_pept        230135..231172
FT                   /transl_table=11
FT                   /locus_tag="CBO0192"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00340 SWALL:Q898U9 (EMBL:AE015937) (366 aa) fasta
FT                   scores: E(): 2e-83, 66.37 38d in 345 aa, and to Clostridium
FT                   acetobutylicum hypothetical protein Cac0651 cac0651
FT                   SWALL:Q97LB1 (EMBL:AE007580) (345 aa) fasta scores: E():
FT                   3.2e-82, 62.31 38d in 345 aa"
FT                   /db_xref="GOA:A5HY85"
FT                   /db_xref="InterPro:IPR007358"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY85"
FT                   /protein_id="CAL81744.1"
FT                   /translation="MEYIKEVNINEAIIHILDNNSEEPILNEYKLRLDDEIYKFILKHV
FT                   DRCLKDEELKYAIFNEERNIVKELSQEYLNGQNDLLDVSKELARQLFILMKGNDNISSC
FT                   DLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKIDIDIVPEFTGLPASAQKIQKCA
FT                   FIKPIREDQEFNLMVIDKQKKSKDSEEYGSNYFISKYLGCKIVENERDATKNFVKATEK
FT                   WAKSNLNENADTSEKIIRTVNKLLKEEDTINVKEVSNNIFGENPDIKLNYEGFISEQGV
FT                   RDKVSIDKEWVDKKFKRIRVKIDKDIDLYIDEESYHDESRFEVKRVGDGSVNIMIKNVY
FT                   NYMQK"
FT   CDS_pept        complement(231446..232372)
FT                   /transl_table=11
FT                   /locus_tag="CBO0193"
FT                   /product="putative fructose-1,6-bisphosphate aldolase"
FT                   /EC_number="4.1.2.13"
FT                   /note="Similar to Entamoeba histolytica putative
FT                   fructose-1,6-bisphosphate aldolase Ald SWALL:Q8MTW2
FT                   (EMBL:AY057996) (326 aa) fasta scores: E(): 5.8e-51, 49.2
FT                   id in 315 aa, and to Clostridium tetani
FT                   fructose-bisphosphate aldolase ctc00341 SWALL:Q898U8
FT                   (EMBL:AE015937) (320 aa) fasta scores: E(): 3.3e-80,76.75
FT                   38d in 314 aa"
FT                   /db_xref="GOA:A5HY86"
FT                   /db_xref="InterPro:IPR000771"
FT                   /db_xref="InterPro:IPR011289"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY86"
FT                   /protein_id="CAL81745.1"
FT                   /translation="MALVTTKEMFKKAYEGKYAIGAFNINNMEILQGVVNSAKAANSAV
FT                   ILQVSAGALKYAGPKYLKAMVDAAIADTGIDVALHLDHGASLDVVKLAVESGFTSVMFD
FT                   GSHYDYEENVAKTKEVVEYAHSHGVVVEAELGVLAGVEDDVQSDVHIYTDPEQAVDFVN
FT                   RTGVDSLAIAIGTSHGAYKFAGEAQLRFDILEEIQSKLPGYPIVLHGASSVDPESVDTC
FT                   NKYGGEIKGAKGVPADMLRKASSMAVCKINMDTDLRLAMTAGIRKVLSEDPKQFDPRKY
FT                   LGEGRARIEKIVEDKIKNVLGSADSLK"
FT   misc_feature    complement(231452..232369)
FT                   /note="Pfam match to entry PF01116
FT                   F_bP_aldolase,Fructose-bisphosphate aldolase class-II,
FT                   score 406.8,E-value 2.1e-119"
FT                   /inference="protein motif:Pfam:PF01116"
FT   CDS_pept        complement(232598..232882)
FT                   /transl_table=11
FT                   /locus_tag="CBO0194"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1349 SWALL:Q8XKP5 (EMBL:AP003190) (144 aa) fasta
FT                   scores: E(): 8e-10, 37.77 38d in 90 aa, and to Clostridium
FT                   acetobutylicum hypothetical protein Cac0670 SWALL:Q97L92
FT                   (EMBL:AE007582) (126 aa) fasta scores: E(): 2.1e-07, 31.57
FT                   38d in 95 aa"
FT                   /db_xref="InterPro:IPR025373"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY87"
FT                   /protein_id="CAL81746.1"
FT                   /translation="MNQCNELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSE
FT                   IDNINIELWKLTQYVKCESEDESLASIHAVKFLLEHIMQMEKINIKNIV"
FT   CDS_pept        complement(232999..233667)
FT                   /transl_table=11
FT                   /locus_tag="CBO0195"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00342 SWALL:Q898U7 (EMBL:AE015937) (225 aa) fasta
FT                   scores: E(): 3.4e-51, 63.06 38d in 222 aa, and to
FT                   Clostridium acetobutylicum ortholog yrbg, yete, ykja,ydfs,
FT                   ydfr b.subtilis cac0671 SWALL:Q97L91 (EMBL:AE007582) (224
FT                   aa) fasta scores: E(): 1e-47, 58.82 38d in 221 aa"
FT                   /db_xref="GOA:A5HY88"
FT                   /db_xref="InterPro:IPR007353"
FT                   /db_xref="InterPro:IPR023090"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY88"
FT                   /protein_id="CAL81747.1"
FT                   /translation="MFIVLIRTIILYLLVILSMRLMGKKQIGELEPFELAITIMISELA
FT                   SLPMQDSRIPLLHGIVPILTLLIVQTMLSIVQLKSEKLRSIITGEPSLLIENGKINFRE
FT                   LKNQRFSINDMMEELRLQGYYDLQSVEYAILETSGQLSIIPKTEESPVTKKDLSLQTTQ
FT                   ERLPVTLILDGKINRKNLKLIKKDEQWLKNKLEKYNISSYDKLLIAVLNSKGNLYYQKK
FT                   "
FT   misc_feature    complement(233044..233421)
FT                   /note="Pfam match to entry PF04239 DUF421, Protein of
FT                   unknown function (DUF421), score 183.3, E-value 4.1e-52"
FT                   /inference="protein motif:Pfam:PF04239"
FT   misc_feature    complement(order(233440..233508,233602..233661))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0195 by TMHMM2.0 at aa 3-22 and 54-76"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        233792..235450
FT                   /transl_table=11
FT                   /locus_tag="CBO0196"
FT                   /product="putative kinase"
FT                   /note="Similar to Clostridium tetani uridine kinase
FT                   ctc00344 SWALL:Q898U6 (EMBL:AE015937) (552 aa) fasta
FT                   scores: E(): 6.7e-122, 61.05 38d in 552 aa, and to
FT                   Clostridium acetobutylicum fision threonyl-trna synthetase
FT                   cac0672 SWALL:Q97L90 (EMBL:AE007582) (553 aa) fasta scores:
FT                   E(): 4.3e-123, 61.84 38d in 553 aa"
FT                   /db_xref="GOA:A5HY89"
FT                   /db_xref="InterPro:IPR006083"
FT                   /db_xref="InterPro:IPR018163"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY89"
FT                   /protein_id="CAL81748.1"
FT                   /translation="MEGLKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEE
FT                   YYELTSTVKKEGVFIPVDITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGL
FT                   YGEIHKTLSLNENDILKIKNRMNEIINKDIKIKKITVKKERAIEIFNEYKMKDKVRLLN
FT                   HIPHEEVKLYELDGRYDYFYGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFV
FT                   EYKKLTKIFRETEKWAKILDVGDVGALNDKVVYGEIKDIIRVSEALHEKKIANIADMIY
FT                   DKENIKMVLISGPSSSGKTTFANRLGIQLRVNALIPVPISLDNYFVNREDTPKDKNGDY
FT                   DFESIDALDIDLFNEDLKHILNGEEVQIPTFNFKKGKREYDGKKIKLPKNGILIVEGIH
FT                   GLNPILTREIPDKNKFKIYISALTQLNIDNHNRVSTTDVRIIRRLVRDYLSRGYKGEET
FT                   LKMWPSIKRGEDRNIFVFQENADVMFNSTIVYELCILKKYALAELNKIDKNSTVHYEAT
FT                   RLKSFLNFFKEVDMNLVPSNSILREFIGGSCFYEY"
FT   misc_feature    234653..235270
FT                   /note="Pfam match to entry PF00485 PRK,Phosphoribulokinase
FT                   / Uridine kinase family, score 12.8,E-value 2e-08"
FT                   /inference="protein motif:Pfam:PF00485"
FT   misc_feature    234668..234691
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        235588..235719
FT                   /transl_table=11
FT                   /locus_tag="CBO0197"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY90"
FT                   /protein_id="CAL81749.1"
FT                   /translation="MELLYPDEYFLELLEENLYNFNKEGYDDLTVNIELDPSVDELD"
FT   CDS_pept        complement(235820..236341)
FT                   /transl_table=11
FT                   /locus_tag="CBO0198"
FT                   /product="CDP-diacylglycerol--serine
FT                   O-phosphatidyltransferase"
FT                   /EC_number="2.7.8.8"
FT                   /note="Similar to Bacillus subtilis
FT                   CDP-diacylglycerol--serine O-phosphatidyltransferase PssA
FT                   or Pss or bsu02270 SWALL:PSS_BACSU (SWALL:P39823) (177 aa)
FT                   fasta scores: E(): 5.7e-17, 39.15 38d in 166 aa, and to
FT                   Clostridium tetani CDP-diacylglycerol--serine
FT                   O-phosphatidyltransferase ctc00346 SWALL:Q898U4
FT                   (EMBL:AE015937) (175 aa) fasta scores: E(): 3.4e-45,70.17
FT                   38d in 171 aa"
FT                   /db_xref="GOA:A5HY91"
FT                   /db_xref="InterPro:IPR000462"
FT                   /db_xref="InterPro:IPR004533"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY91"
FT                   /protein_id="CAL81750.1"
FT                   /translation="MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGL
FT                   MDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMF
FT                   PIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYL
FT                   MVSNVKLKKF"
FT   misc_feature    complement(235829..236233)
FT                   /note="Pfam match to entry PF01066
FT                   CDP-OH_P_transf,CDP-alcohol phosphatidyltransferase, score
FT                   61.0, E-value 2.6e-15"
FT                   /inference="protein motif:Pfam:PF01066"
FT   misc_feature    complement(order(235844..235903,235916..235984,
FT                   236021..236089,236255..236323))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0198 by TMHMM2.0 at aa 7-29, 85-107, 120-142 and
FT                   147-166"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(236126..236194)
FT                   /note="PS00379 CDP-alcohol phosphatidyltransferases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00379"
FT   CDS_pept        236528..236944
FT                   /transl_table=11
FT                   /locus_tag="CBO0199"
FT                   /product="conserved hypothetical membrane"
FT                   /note="Similar to Clostridium acetobutylicum CBS domains
FT                   cac0678 SWALL:Q97L84 (EMBL:AE007583) (142 aa) fasta scores:
FT                   E(): 4e-24, 54.81 38d in 135 aa, and to Clostridium tetani
FT                   inosine-5-monophosphate dehydrogenase related protein
FT                   ctc00347 SWALL:Q898U3 (EMBL:AE015937) (143 aa) fasta
FT                   scores: E(): 4.3e-25, 57.97 38d in 138 aa"
FT                   /db_xref="InterPro:IPR000644"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY92"
FT                   /protein_id="CAL81751.1"
FT                   /translation="MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVG
FT                   VITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDN
FT                   QNIVGIVSLGDIAIEPKHENEAQKALSGISEQNN"
FT   misc_feature    236540..236698
FT                   /note="Pfam match to entry PF00571 CBS, CBS domain, score
FT                   68.9, E-value 1.1e-17"
FT                   /inference="protein motif:Pfam:PF00571"
FT   misc_feature    236732..236890
FT                   /note="Pfam match to entry PF00571 CBS, CBS domain, score
FT                   62.9, E-value 7.3e-16"
FT                   /inference="protein motif:Pfam:PF00571"
FT   CDS_pept        237050..237934
FT                   /transl_table=11
FT                   /locus_tag="CBO0200"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani BmrU protein or
FT                   ctc00349 SWALL:Q898U2 (EMBL:AE015937) (315 aa) fasta
FT                   scores: E(): 5.3e-81, 71.23 38d in 292 aa, and to
FT                   Clostridium acetobutylicum unsharacterized protein, bmru
FT                   family cac0679 SWALL:Q97L83 (EMBL:AE007583) (295 aa) fasta
FT                   scores: E(): 1.2e-78, 68.83 38d in 292 aa"
FT                   /db_xref="GOA:A5HY93"
FT                   /db_xref="InterPro:IPR001206"
FT                   /db_xref="InterPro:IPR005218"
FT                   /db_xref="InterPro:IPR016064"
FT                   /db_xref="InterPro:IPR017438"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY93"
FT                   /protein_id="CAL81752.1"
FT                   /translation="MSKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYD
FT                   LDDAFKSIDESYKYILVAGGDGTVDNVVNHLKKFSIDLPIAILPTGTANDFAKFIGMPT
FT                   NVGEACEQILKSSVKKIDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAYYVK
FT                   GLEQLPNFRRLKVNVRSEEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIK
FT                   ACAIKDMIGLFIKMIRGDHLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIE
FT                   CVKEGLDILGILD"
FT   misc_feature    237227..237364
FT                   /note="Pfam match to entry PF00781 DAGKc, Diacylglycerol
FT                   kinase catalytic domain (presumed), score 36.1, E-value
FT                   7.1e-10"
FT                   /inference="protein motif:Pfam:PF00781"
FT   CDS_pept        238008..238652
FT                   /transl_table=11
FT                   /locus_tag="CBO0201"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   membrane protein cac0680 SWALL:Q97L82 (EMBL:AE007583) (216
FT                   aa) fasta scores: E(): 2.9e-10, 27.06 38d in 218 aa"
FT                   /db_xref="GOA:A5HY94"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY94"
FT                   /protein_id="CAL81753.1"
FT                   /translation="MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMIL
FT                   KFISLTLLVFVNNIRNLYWLKWIYFLDFLAIPICILICFYICIKNNKFNLNYIIFIIVL
FT                   ITSILIFFMTKYSLKINMFNSQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNKYIN
FT                   KNILYLMFFSTIVNISDIILSFLNINILPPNILGNIIWIYTLYTAVNKLIR"
FT   sig_peptide     238008..238077
FT                   /locus_tag="CBO0201"
FT                   /note="probabilty 0.730, with cleavage site probability
FT                   0.253 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(238017..238070,238107..238175,238203..238271,
FT                   238290..238358,238401..238469,238506..238565,
FT                   238575..238634)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0201 by TMHMM2.0 at aa 4-21, 34-56, 66-88,
FT                   95-117,132-154, 167-186 and 190-209"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(238744..240681)
FT                   /transl_table=11
FT                   /locus_tag="CBO0202"
FT                   /product="putative radical SAM protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1196 cpe1196 SWALL:Q8XL46 (EMBL:AP003189) (662
FT                   aa) fasta scores: E(): 5.7e-150, 59.93 38d in 644 aa, and
FT                   to Thermotoga maritima hypothetical protein Tm0337 tm0337
FT                   SWALL:Q9WYH2 (EMBL:AE001714) (558 aa) fasta scores: E():
FT                   1.4e-99, 48.82 38d in 553 aa"
FT                   /db_xref="GOA:A5HY95"
FT                   /db_xref="InterPro:IPR006638"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="InterPro:IPR013704"
FT                   /db_xref="InterPro:IPR022946"
FT                   /db_xref="InterPro:IPR023404"
FT                   /db_xref="InterPro:IPR024560"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY95"
FT                   /protein_id="CAL81754.1"
FT                   /translation="MSNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGR
FT                   VLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFY
FT                   SPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILED
FT                   SSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEV
FT                   STNKKSYAEAYKIQYYEQDSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYAR
FT                   TYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANM
FT                   MTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSL
FT                   LRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNL
FT                   MGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTP
FT                   EQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKE
FT                   ALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKK
FT                   NSLSKHKKRK"
FT   misc_feature    complement(239173..239775)
FT                   /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM
FT                   superfamily, score 17.4, E-value 0.015"
FT                   /inference="protein motif:Pfam:PF04055"
FT   misc_binding    240906..241073
FT                   /locus_tag="CBO0203"
FT                   /bound_moiety="unknown"
FT                   /note="ykoK riboswitch"
FT   CDS_pept        241276..242541
FT                   /transl_table=11
FT                   /locus_tag="CBO0203"
FT                   /product="putative magnesium binding ptotein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1323 SWALL:Q8XKS1 (EMBL:AP003190) (423 aa) fasta
FT                   scores: E(): 3.9e-69, 50.47 38d in 418 aa"
FT                   /db_xref="GOA:A5HY96"
FT                   /db_xref="InterPro:IPR000644"
FT                   /db_xref="InterPro:IPR006668"
FT                   /db_xref="InterPro:IPR006669"
FT                   /db_xref="InterPro:IPR027275"
FT                   /db_xref="InterPro:IPR038076"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY96"
FT                   /protein_id="CAL81755.1"
FT                   /translation="MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAY
FT                   KIKKGREVVNYEFKNISFYDDEGKAIIKVIGTRDIILRKYSYLLSQHLLNKQIIDINGK
FT                   KMVKVHDLRIGEIAGEYKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIMWDS
FT                   VESLEMVNNNLKLSVSYQKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEI
FT                   DLEVKTEMLEEMTSSKKAEIIYNMSKDEAADILAQMKEEEVEQILSIMEERDAKDIRKL
FT                   MGYKEETAGSIMNKDFISFNVNITAEETIDLLREIKPKDEEAYYIYIVDEKEQLKGAIS
FT                   LTDLIICTPGAKLKDIMDKDIVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTIS
FT                   IDDIIEDVFAPMWRKKVKIVAV"
FT   misc_feature    241285..241515
FT                   /note="Pfam match to entry PF05239 PRC, PRC-barrel
FT                   domain,score 25.7, E-value 0.00011"
FT                   /inference="protein motif:Pfam:PF05239"
FT   misc_feature    241756..242142
FT                   /note="Pfam match to entry PF03448 MgtE_N, MgtE
FT                   intracellular domain, score 124.2, E-value 2.5e-34"
FT                   /inference="protein motif:Pfam:PF03448"
FT   misc_feature    242146..242322
FT                   /note="Pfam match to entry PF00571 CBS, CBS domain, score
FT                   25.5, E-value 0.00013"
FT                   /inference="protein motif:Pfam:PF00571"
FT   misc_feature    242338..242499
FT                   /note="Pfam match to entry PF00571 CBS, CBS domain, score
FT                   43.6, E-value 4.6e-10"
FT                   /inference="protein motif:Pfam:PF00571"
FT   CDS_pept        242771..243466
FT                   /transl_table=11
FT                   /gene="sleB"
FT                   /locus_tag="CBO0204"
FT                   /product="spore cortex-lytic enzyme precursor"
FT                   /note="Similar to Bacillus cereus spore cortex-lytic enzyme
FT                   precursor SleB or bc2753 SWALL:SLEB_BACCR (SWALL:P70874)
FT                   (259 aa) fasta scores: E(): 1.6e-25, 42.85 id in 259 aa,
FT                   and to Clostridium tetani spore-cortex-lytic enzyme
FT                   precursor ctc00350 SWALL:Q898U1 (EMBL:AE015937) (255 aa)
FT                   fasta scores: E(): 5e-62, 65.93 38d in 229 aa"
FT                   /db_xref="GOA:A5HY97"
FT                   /db_xref="InterPro:IPR002477"
FT                   /db_xref="InterPro:IPR011105"
FT                   /db_xref="InterPro:IPR014224"
FT                   /db_xref="InterPro:IPR036365"
FT                   /db_xref="InterPro:IPR036366"
FT                   /db_xref="InterPro:IPR042047"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY97"
FT                   /protein_id="CAL81756.1"
FT                   /translation="MRKNIYLKRAIIYVLAIMLAYGSTTLYILPYTNATKAVAYYYGHR
FT                   GDIISQVQRKLKAWGYYNGGVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLVALGIN
FT                   TGSSGSSSSSNNQDVMLLARLINGEARGEPYEGQVAVGAVVLNRTRDSKFPNTIAGVIY
FT                   EPLAFTAIADGQINAQMQQTSINAARDALNGWDPSDGATYYFNPATATSSWIWSRPLIK
FT                   VIGKHRFCR"
FT   sig_peptide     242771..242876
FT                   /gene="sleB"
FT                   /locus_tag="CBO0204"
FT                   /note="probabilty 0.945, with cleavage site probability
FT                   0.363 between residues 36 and 37"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    242804..242872
FT                   /note="1 probable transmembrane helix predicted for CBO0204
FT                   by TMHMM2.0 at aa 12-34"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    242903..243085
FT                   /note="Pfam match to entry PF01471 PG_binding_1, Putative
FT                   peptidoglycan binding domain, score 76.4, E-value 6.1e-20"
FT                   /inference="protein motif:Pfam:PF01471"
FT   misc_binding    243545..243800
FT                   /gene="cysK1"
FT                   /locus_tag="CBO0205"
FT                   /bound_moiety="tRNA"
FT                   /note="T-box leader"
FT   CDS_pept        243830..244744
FT                   /transl_table=11
FT                   /gene="cysK1"
FT                   /locus_tag="CBO0205"
FT                   /product="cysteine synthase 1"
FT                   /EC_number="2.5.1.47"
FT                   /note="Also similar to CBO0205 (53.5 38d)."
FT                   /db_xref="GOA:A5HY98"
FT                   /db_xref="InterPro:IPR000634"
FT                   /db_xref="InterPro:IPR001216"
FT                   /db_xref="InterPro:IPR001926"
FT                   /db_xref="InterPro:IPR005856"
FT                   /db_xref="InterPro:IPR005859"
FT                   /db_xref="InterPro:IPR036052"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY98"
FT                   /protein_id="CAL81757.1"
FT                   /translation="MLYGNSIDLIGNTPMFKLNNMQEENMADVYIKLEKFNPGGSIKDR
FT                   AALGMIEEAEKMGKIKPGDIIVEPTSGNTGIGLAMVGRLKGYKVIIVMPDSMSIERRNM
FT                   IKAYGAELVLTEGNKGMTGAIEKAEELARDKKGYFIPQQFSNRANSKKHYETTAVEILK
FT                   DVEDLDAFVASVGTGGTIAGIGRRLKEFNKNIKVVAVEPHNSPVISGGKAAPHKIQGIG
FT                   AGFIPDVYEKDVVDDVMTITDEESYEYARRFGAEEGILVGISSGANIAAAIKIAKKLGK
FT                   GKKVVTVAPDGGEKYISTGLYDK"
FT   misc_feature    243845..244705
FT                   /note="Pfam match to entry PF00291 PALP,Pyridoxal-phosphate
FT                   dependent enzyme, score 426.6, E-value 2.3e-125"
FT                   /inference="protein motif:Pfam:PF00291"
FT   misc_feature    243923..243979
FT                   /note="PS00901 Cysteine synthase/cystathionine
FT                   beta-synthase P-phosphate attachment site."
FT                   /inference="protein motif:ProSite:PS00901"
FT   misc_feature    243929..243970
FT                   /note="PS00165 Serine/threonine dehydratases
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:ProSite:PS00165"
FT   CDS_pept        244759..245355
FT                   /transl_table=11
FT                   /gene="cysE"
FT                   /gene_synonym="cysA"
FT                   /locus_tag="CBO0206"
FT                   /product="serine acetyltransferase"
FT                   /EC_number="2.3.1.30"
FT                   /note="Similar to Bacillus subtilis serine
FT                   acetyltransferase CysE or CusA or bsu00930 SWALL:CYSE_BACSU
FT                   (SWALL:Q06750) (217 aa) fasta scores: E(): 4.3e-35, 61.07
FT                   38d in 167 aa, and to Clostridium tetani serine
FT                   acetyltransferase ctc00351 SWALL:Q898U0 (EMBL:AE015937)
FT                   (186 aa) fasta scores: E(): 2.6e-47,74.45 38d in 184 aa"
FT                   /db_xref="GOA:A5HY99"
FT                   /db_xref="InterPro:IPR001451"
FT                   /db_xref="InterPro:IPR005881"
FT                   /db_xref="InterPro:IPR011004"
FT                   /db_xref="InterPro:IPR018357"
FT                   /db_xref="InterPro:IPR042122"
FT                   /db_xref="UniProtKB/TrEMBL:A5HY99"
FT                   /protein_id="CAL81758.1"
FT                   /translation="MKNPFKVLIYDLKNAKEKDPAARNILEVFILYPFIHALIGYRIAH
FT                   LFYKAHLFFLARLISQISRFFTGIEIHPGATIGKGLFIDHGMGVVIGETAEVGDNVTLY
FT                   HGVTLGGTGKDKGKRHPTVGNNVIIGSGAKVLGPINIGDNVKIGANAVVLRHVPANATA
FT                   VGIPAKVVRYEKKSSVIEIRDYNGVKKVIYNDMII"
FT   misc_feature    244819..244887
FT                   /note="1 probable transmembrane helix predicted for CBO0206
FT                   by TMHMM2.0 at aa 21-43"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    244960..245013
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (three repeats), score 8.7,E-value
FT                   8.6"
FT                   /inference="protein motif:Pfam:PF00132"
FT   misc_feature    245020..245073
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (three repeats), score 16.5,E-value
FT                   0.066"
FT                   /inference="protein motif:Pfam:PF00132"
FT   misc_feature    245116..245169
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (three repeats), score 10.7,E-value
FT                   3.8"
FT                   /inference="protein motif:Pfam:PF00132"
FT   misc_feature    245143..245229
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00101"
FT   misc_feature    245170..245223
FT                   /note="Pfam match to entry PF00132 hexapep, Bacterial
FT                   transferase hexapeptide (three repeats), score 13.7,E-value
FT                   0.48"
FT                   /inference="protein motif:Pfam:PF00132"
FT   CDS_pept        245377..246342
FT                   /transl_table=11
FT                   /locus_tag="CBO0207"
FT                   /product="putative iron-sulfur cluster-binding protein"
FT                   /note="Similar to Clostridium tetani iron-sulfur
FT                   cluster-binding protein ctc00352 SWALL:Q898T9
FT                   (EMBL:AE015937) (327 aa) fasta scores: E(): 2.3e-75,61.12
FT                   38d in 319 aa"
FT                   /db_xref="GOA:A5HYA0"
FT                   /db_xref="InterPro:IPR004453"
FT                   /db_xref="InterPro:IPR009051"
FT                   /db_xref="InterPro:IPR013542"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA0"
FT                   /protein_id="CAL81759.1"
FT                   /translation="MNCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNE
FT                   FEGKDINKRVDPFQYMKEGKTIISIAFPYLFNLGHKHDVYFSKYTQGRDYHTVVNEYLQ
FT                   KISNFIQSKGYRAEYFVDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEIITD
FT                   MEIDEDEPMECKCEECNICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMF
FT                   GCDTCQRVCPYNRNINTSNIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGK
FT                   SILQRNALINCITMNKDVDIQGKNIKSPYVLDYYHRLLKK"
FT   misc_feature    245881..245952
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 9.8, E-value 0.0074"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    245902..245937
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   CDS_pept        246490..247191
FT                   /transl_table=11
FT                   /gene="plsD"
FT                   /locus_tag="CBO0208"
FT                   /product="probable acyltransferase"
FT                   /note="Similar to Clostridium butyricum
FT                   sn-glycerol-3-phosphate acyltransferase plsD SWALL:O32330
FT                   (EMBL:AF009362) (234 aa) fasta scores: E(): 9e-45, 56.65 id
FT                   in 233 aa"
FT                   /db_xref="GOA:A5HYA1"
FT                   /db_xref="InterPro:IPR002123"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA1"
FT                   /protein_id="CAL81760.1"
FT                   /translation="MISPTMIKIIGHMPKGFLKFLSRKVLNRYINKYANLKINGKENLK
FT                   NIDKPIIFISNHLSNSDALVINKALEDQDITFIAGVKLKDNSLTKLGLEITKTIPIKPN
FT                   TADKEAIYNIVKTLKSGNNILIFPEGTRSRTAKLMEPKKGVVLIQKLSKATIVPLGISG
FT                   TEKLLPINDKDMALECFQSADVTINIGRALELPKKNKEESKHEYEDRLMDYFMSEIAKL
FT                   IPKEYRGIYNN"
FT   misc_feature    246592..246975
FT                   /note="Pfam match to entry PF01553
FT                   Acyltransferase,Acyltransferase, score 96.7, E-value
FT                   4.7e-26"
FT                   /inference="protein motif:Pfam:PF01553"
FT   CDS_pept        247284..247925
FT                   /transl_table=11
FT                   /gene="nth"
FT                   /locus_tag="CBO0209"
FT                   /product="endonuclease III"
FT                   /note="Similar to Paenibacillus polymyxa End3 ntH
FT                   SWALL:Q9LCR1 (EMBL:AB003153) (224 aa) fasta scores: E():
FT                   2e-35, 46.26 38d in 214 aa, and to Clostridium perfringens
FT                   endonuclease III cpe1318 SWALL:Q8XKS6 (EMBL:AP003190) (209
FT                   aa) fasta scores: E(): 2.2e-47, 63.5 38d in 200 aa"
FT                   /db_xref="GOA:A5HYA2"
FT                   /db_xref="InterPro:IPR000445"
FT                   /db_xref="InterPro:IPR003265"
FT                   /db_xref="InterPro:IPR003651"
FT                   /db_xref="InterPro:IPR004035"
FT                   /db_xref="InterPro:IPR004036"
FT                   /db_xref="InterPro:IPR005759"
FT                   /db_xref="InterPro:IPR011257"
FT                   /db_xref="InterPro:IPR023170"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA2"
FT                   /protein_id="CAL81761.1"
FT                   /translation="MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDK
FT                   KVNEITKELFKEYSTPKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQV
FT                   PNDFNDLTSLPGVGRKTANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQL
FT                   QQAIPKELWILMHHVLIFHGRRCCVARKPKCEECTIKKYCKYYNEEIKPS"
FT   misc_feature    247383..247796
FT                   /note="Pfam match to entry PF00730 HhH-GPD, HhH-GPD
FT                   superfamily base excision DNA repair protein, score
FT                   67.1,E-value 4e-17"
FT                   /inference="protein motif:Pfam:PF00730"
FT   misc_feature    247578..247667
FT                   /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix
FT                   motif, score 27.1, E-value 4.3e-05"
FT                   /inference="protein motif:Pfam:PF00633"
FT   misc_feature    247587..247676
FT                   /note="PS01155 Endonuclease III family signature."
FT                   /inference="protein motif:ProSite:PS01155"
FT   misc_feature    247830..247895
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1213.000, SD 3.32 at aa 183-204, sequence
FT                   GRRCCVARKPKCEECTIKKYCK"
FT   misc_feature    247842..247892
FT                   /note="PS00764 Endonuclease III iron-sulfur binding region
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00764"
FT   CDS_pept        248077..249249
FT                   /transl_table=11
FT                   /locus_tag="CBO0210"
FT                   /product="NAD-dependent malic enzyme"
FT                   /EC_number="1.1.1.38"
FT                   /note="Similar to Bacillus stearothermophilus NAD-dependent
FT                   malic enzyme SWALL:MAOX_BACST (SWALL:P16468) (478 aa) fasta
FT                   scores: E(): 7e-79, 59.38 38d in 389 aa,and to Clostridium
FT                   tetani NAD-dependent malic enzyme ctc00356 SWALL:Q898T6
FT                   (EMBL:AE015937) (389 aa) fasta scores: E(): 6.1e-102, 73.52
FT                   38d in 389 aa"
FT                   /note="Also similar to CBO0246 (66.6 38d)"
FT                   /db_xref="GOA:A5HYA3"
FT                   /db_xref="InterPro:IPR001891"
FT                   /db_xref="InterPro:IPR012301"
FT                   /db_xref="InterPro:IPR012302"
FT                   /db_xref="InterPro:IPR015884"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="InterPro:IPR037062"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA3"
FT                   /protein_id="CAL81762.1"
FT                   /translation="MDIKEKSLMVHKKFKGKLSIEGKIQVKNKEDLSIAYTPGVAEPCV
FT                   KINEDKSLVYEYTMKGNTVAVVTNGTAVLGLGDIGPYAGLPVMEGKALLFKEFADIDSF
FT                   PICIDSKDSEEIIKTVKLIAPGFGGINLEDIKAPECFYIEKKLKEELDIPVFHDDQHGT
FT                   AIVVLAGIYNALRLVGKKLEEARIVINGAGSAGISICKLLLQAGVKNIIMCDKEGSLVK
FT                   GNSNLNEAQKLIVEVTNKENEKGTLKDIIKGKDVFIGVSAPNILTEEMVNAMNKDSIVF
FT                   AMANPTPEIMPDKAKKAGARVVATGRSDFPNQINNVLVFPGIFRGALDVRSKVINEEMK
FT                   LAASKAIASLVQDNELNEEYIIPGAFDKRVAEVVAEEVKKVALKMGLSKL"
FT   misc_feature    248122..248550
FT                   /note="Pfam match to entry PF00390 malic, Malic
FT                   enzyme,N-terminal domain, score 267.2, E-value 2.2e-77"
FT                   /inference="protein motif:Pfam:PF00390"
FT   misc_feature    248554..249225
FT                   /note="Pfam match to entry PF03949 malic_N, Malic
FT                   enzyme,NAD binding domain, score 396.2, E-value 3.3e-116"
FT                   /inference="protein motif:Pfam:PF03949"
FT   misc_feature    249034..249111
FT                   /note="PS00217 Sugar transport proteins signature 2."
FT                   /inference="protein motif:ProSite:PS00217"
FT   CDS_pept        complement(249276..250505)
FT                   /transl_table=11
FT                   /locus_tag="CBO0211"
FT                   /product="putative molybdopterin binding"
FT                   /note="Similar to Bacillus subtilis cina-like protein CinA
FT                   or bsu16930 SWALL:CINA_BACSU (SWALL:P46323) (416 aa) fasta
FT                   scores: E(): 6.2e-57, 44.92 38d in 394 aa, and to
FT                   Clostridium acetobutylicum competence-damage inducible
FT                   protein, cina cac3586 SWALL:Q97D94 (EMBL:AE007855) (411 aa)
FT                   fasta scores: E(): 1.3e-92, 60.29 38d in 408 aa"
FT                   /db_xref="InterPro:IPR001453"
FT                   /db_xref="InterPro:IPR008135"
FT                   /db_xref="InterPro:IPR008136"
FT                   /db_xref="InterPro:IPR036425"
FT                   /db_xref="InterPro:IPR036653"
FT                   /db_xref="InterPro:IPR041424"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA4"
FT                   /protein_id="CAL81763.1"
FT                   /translation="MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDN
FT                   ENRLLKELERAFNYCDLVITTGGLGPTKDDLTKESVAKFFQEDLVLHEKSLKQIEKRLL
FT                   CFNKSMTESNKKQAYFPKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMFENK
FT                   VIPYLEKLTNSTIKSKVLRITGIGESDVADLISDILESQTNPTVAPYAKQGETTLRITA
FT                   KANSEEKALNLIVPIEKEIRQILGDNIYGSGETSLEEVVANILVKRNLTIATAESCTGG
FT                   LLAGKLINFPGISSVFLEGAITYSNESKINRLNVKKETLEKYTAVSKEVALEMAEGIAK
FT                   SAGTNIGISTTGVAGPGGGTYDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTR
FT                   ALDFLRRNLK"
FT   misc_feature    complement(249282..249746)
FT                   /note="Pfam match to entry PF02464 CinA,Competence-damaged
FT                   protein, score 217.2, E-value 2.5e-62"
FT                   /inference="protein motif:Pfam:PF02464"
FT   misc_feature    complement(249372..249395)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    complement(250008..250505)
FT                   /note="Pfam match to entry PF00994 MoCF_biosynth, Probable
FT                   molybdopterin binding domain, score 49.1, E-value 1e-11"
FT                   /inference="protein motif:Pfam:PF00994"
FT   CDS_pept        complement(250531..251514)
FT                   /transl_table=11
FT                   /locus_tag="CBO0212"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   hydrolase from alpha/beta family, yqkd b.subtilis ortholog
FT                   cac2725 SWALL:Q97FL1 (EMBL:AE007770) (330 aa) fasta scores:
FT                   E(): 1.2e-61, 50.31 38d in 318 aa"
FT                   /db_xref="GOA:A5HYA5"
FT                   /db_xref="InterPro:IPR019149"
FT                   /db_xref="InterPro:IPR022742"
FT                   /db_xref="InterPro:IPR029058"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA5"
FT                   /protein_id="CAL81764.1"
FT                   /translation="MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVMA
FT                   CIEPTSRNSTNMYDIYKSTFDERRFNTLKKENITINSKYGYTLKGTYMENPHKTKNSVV
FT                   IVHGIRSSRWESMKYADLYLDKGFNVLIYDSRYHGLSGGSDVTYGYYEKYDLDQCIDWL
FT                   ERKNPGGIIGAHGESLGASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLNEELH
FT                   INNKIITDSLLFYSGACALLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSE
FT                   EMYNIKPGIKEIYIAPNAGHAQAYLYNKKEYRKNLYKFIDKYVKIN"
FT   misc_feature    complement(251407..251466)
FT                   /note="1 probable transmembrane helix predicted for CBO0212
FT                   by TMHMM2.0 at aa 17-36"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(251409..251514)
FT                   /locus_tag="CBO0212"
FT                   /note="probabilty 0.839, with cleavage site probability
FT                   0.299 between residues 34 and 35"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(251624..252658)
FT                   /transl_table=11
FT                   /locus_tag="CBO0213"
FT                   /product="putative glutamyl-aminopeptidase"
FT                   /EC_number="3.4.11.7"
FT                   /note="Similar to Lactococcus lactis
FT                   glutamyl-aminopeptidase PepA SWALL:PEPA_LACLC
FT                   (SWALL:Q48677) (355 aa) fasta scores: E(): 4.4e-08, 23.21
FT                   id in 336 aa, and to Clostridium acetobutylicum
FT                   endoglucanase, aminopeptidase m42 family cac0690
FT                   SWALL:Q97L72 (EMBL:AE007584) (343 aa) fasta scores: E():
FT                   2.2e-89, 65.78 38d in 342 aa"
FT                   /db_xref="GOA:A5HYA6"
FT                   /db_xref="InterPro:IPR008007"
FT                   /db_xref="InterPro:IPR023367"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA6"
FT                   /protein_id="CAL81765.1"
FT                   /translation="MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKI
FT                   TNKGSIIITLEGEDKSFERTLSAHMDTLGAMVKDINDNGTLSIVPLGGFMMNSIEGENC
FT                   SIHTLNDEVYSGTIQTIKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLNINI
FT                   GDFISFDTRNIFTENGFIKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEE
FT                   VGHGASYIPKNTKEFIAVDMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKT
FT                   SNIPYKIDIYPSYGSDASAALKAGFDIKAALIGPGVYASHAYERTHMDSILATLDLIIK
FT                   YCVS"
FT   misc_feature    complement(251648..252514)
FT                   /note="Pfam match to entry PF05343 Peptidase_M42, M42
FT                   glutamyl aminopeptidase, score 379.5, E-value 3.6e-111"
FT                   /inference="protein motif:Pfam:PF05343"
FT   CDS_pept        252810..253946
FT                   /transl_table=11
FT                   /locus_tag="CBO0214"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein, vanw of enterococcus
FT                   faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411
FT                   aa) fasta scores: E(): 4e-53, 44.75 38d in 362 aa, and to
FT                   Clostridium tetani vancomycin b-type resistance protein
FT                   vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa)
FT                   fasta scores: E(): 3.3e-61, 49.33 38d in 377 aa"
FT                   /note="Also similar to the downstream CDS, CBO0215 (48 id)
FT                   and CBO0820 (45 38d)"
FT                   /db_xref="InterPro:IPR007391"
FT                   /db_xref="InterPro:IPR022029"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA7"
FT                   /protein_id="CAL81766.1"
FT                   /translation="MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYY
FT                   NNLIYPGVSVEGVDLSGKTKEEAKKIVQEKYWNKLLSKNINVKAKDKTYTLKYSDLKPT
FT                   SNLDNVLKDAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESLMSKIEKDVNIS
FT                   PIDASLASNGGGFSVISHKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRIT
FT                   EDKLQGVGRMIGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTA
FT                   EKGYQAAPIIVGEKMENGLGGGVCQVSSTLFNAVAGSKLQSIERSHHTKPVHYVPQGMD
FT                   ATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK"
FT   misc_feature    252810..252857
FT                   /note="PS00063 Aldo/keto reductase family putative active
FT                   site signature."
FT                   /inference="protein motif:ProSite:PS00063"
FT   sig_peptide     252810..252906
FT                   /locus_tag="CBO0214"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.523 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    252867..252926
FT                   /note="1 probable transmembrane helix predicted for CBO0214
FT                   by TMHMM2.0 at aa 20-39"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    252978..253001
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    253464..253937
FT                   /note="Pfam match to entry PF04294 VanW, VanW like protein,
FT                   score 222.9, E-value 4.8e-64"
FT                   /inference="protein motif:Pfam:PF04294"
FT   CDS_pept        254151..255503
FT                   /transl_table=11
FT                   /locus_tag="CBO0215"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein, vanw of enterococcus
FT                   faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411
FT                   aa) fasta scores: E(): 3.4e-55, 42.72 38d in 433 aa, and to
FT                   Clostridium tetani vancomycin b-type resistance protein
FT                   vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa)
FT                   fasta scores: E(): 7.3e-69, 45.59 38d in 454 aa"
FT                   /note="Also similar to the upstream CDS, CBO0214 (48 38d)
FT                   and CBO0820 (47 38d)"
FT                   /db_xref="GOA:A5HYA8"
FT                   /db_xref="InterPro:IPR007391"
FT                   /db_xref="InterPro:IPR011098"
FT                   /db_xref="InterPro:IPR022029"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA8"
FT                   /protein_id="CAL81767.1"
FT                   /translation="MKNRKAKRILIFIFLLMSILFGVFYYIYKEVSGFDSVIYPGVFIE
FT                   GIDLTAKTKNEAKNIIESKYSKVIVRKNITISWNDKKYNLSYAKLNPRYNIQETIDNAY
FT                   SYGKNLSIFSKYKIIKSKSIQNYLLKFSYDKKAMDRFIDSIERDINKEAENAKINVNKG
FT                   SISIVQDKKGFKLEKDKLKKILYSKMDGKNLKDINEKAPVKTQEAKIKKKQLETVNSNI
FT                   SSYTTNYGSISSPQRANNIVISTKAINGTLLMPGESFSFNNTVGPRTEKRGYQGAPVII
FT                   GNKIESGLGGGICQVSGTLYNAMLKANINATERVRHTFPSTYVPIGMDATIDYGNIDYK
FT                   FKNTLTYPIYIEGITNGANVTFNIYSNSSLKNKTYNISSEIYETITPKEQYIDDASIPL
FT                   GKTEIVQEAHTGYKVKVYKSTVENDSVVKKELLYTDFYKPVDKIIKRGTKK"
FT   sig_peptide     254151..254223
FT                   /locus_tag="CBO0215"
FT                   /note="probabilty 0.998, with cleavage site probability
FT                   0.564 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    254175..254234
FT                   /note="1 probable transmembrane helix predicted for CBO0215
FT                   by TMHMM2.0 at aa 9-28"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    254757..255245
FT                   /note="Pfam match to entry PF04294 VanW, VanW like protein,
FT                   score 226.0, E-value 5.7e-65"
FT                   /inference="protein motif:Pfam:PF04294"
FT   misc_feature    255333..255356
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        255650..256657
FT                   /transl_table=11
FT                   /gene="splB"
FT                   /gene_synonym="spl"
FT                   /locus_tag="CBO0216"
FT                   /product="spore photoproduct lyase"
FT                   /EC_number="4.1.99.-"
FT                   /note="Similar to Bacillus subtilis spore photoproduct
FT                   lyase SplB or Spl or bsu13930 SWALL:SPL_BACSU
FT                   (SWALL:P37956) (342 aa) fasta scores: E(): 1.4e-52, 45.23
FT                   id in 336 aa, and to Clostridium acetobutylicum spore
FT                   photoproduct lyase, SplB cac0699 SWALL:Q97L63
FT                   (EMBL:AE007585) (336 aa) fasta scores: E(): 4.5e-71,54.92
FT                   38d in 335 aa"
FT                   /db_xref="GOA:A5HYA9"
FT                   /db_xref="InterPro:IPR023897"
FT                   /db_xref="InterPro:IPR034559"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYA9"
FT                   /protein_id="CAL81768.1"
FT                   /translation="MFIPKTVIFEEKALEYVRGKEILKELKNKNIEIKYSKTGRVTGQR
FT                   DKTPNEMYSEGKDTLVIGIRKSLDFQSCKPSAHYQLPLVSGCMGMCEYCYLNTQMGKRP
FT                   YTKVYVNTEEILNKAEKYSRERLPEITVFEGAATSDPIPVEPYTHSLKDTIEFFGQKHN
FT                   MKFRFVTKFTDVNSLVHLNHNRNTTIRFSINTDNIIRNFEHRTPLVIDRLKAAEKIAKA
FT                   GYSLGFIIAPVFIYRGWEKEYLDLLKNINIMFKGVPVEFEVISHRFTKRAKDNILSVFS
FT                   NTTLPMVEENRKFKYGQFGYGKYIYKDEELQNIKKFFRDSITKFFGEDNINYII"
FT   misc_feature    255890..256390
FT                   /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM
FT                   superfamily, score 28.8, E-value 1.4e-05"
FT                   /inference="protein motif:Pfam:PF04055"
FT   CDS_pept        256785..257252
FT                   /transl_table=11
FT                   /locus_tag="CBO0217"
FT                   /product="putative RNA methylase"
FT                   /note="Similar to Bacillus subtilis CspR SWALL:Q45512
FT                   (EMBL:U58864) (157 aa) fasta scores: E(): 2.6e-31, 53.79 id
FT                   in 158 aa, and to Clostridium acetobutylicum predicted
FT                   tRNA-methylase cac0700 SWALL:Q97L62 (EMBL:AE007585) (160
FT                   aa) fasta scores: E(): 5.7e-53, 83.11 38d in 154 aa"
FT                   /db_xref="GOA:A5HYB0"
FT                   /db_xref="InterPro:IPR001537"
FT                   /db_xref="InterPro:IPR016914"
FT                   /db_xref="InterPro:IPR029026"
FT                   /db_xref="InterPro:IPR029028"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB0"
FT                   /protein_id="CAL81769.1"
FT                   /translation="MSLNIVLFQPEIPQNTGNIARTCVLTNSRLHLIKPLGFSLDEKHL
FT                   RRAGLDYWQYLDLSIYESYEELREKYKDSNFYFSTTHGNNFYTDVKYSDGDFIVFGRES
FT                   SGLPDEIRDSDPSKCIRVPMINTTTRSLNLSNTVAVVTYEALRQVGFPDMK"
FT   misc_feature    256788..257213
FT                   /note="Pfam match to entry PF00588 SpoU_methylase, SpoU
FT                   rRNA Methylase family, score 136.3, E-value 5.8e-38"
FT                   /inference="protein motif:Pfam:PF00588"
FT   CDS_pept        257265..258104
FT                   /transl_table=11
FT                   /locus_tag="CBO0218"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani degv protein degv or
FT                   ctc00368 SWALL:Q898S4 (EMBL:AE015937) (280 aa) fasta
FT                   scores: E(): 1.1e-66, 65.71 38d in 280 aa, and to
FT                   Clostridium acetobutylicum hypothetical upf0230 protein
FT                   Cac0701 SWALL:Y701_CLOAB (SWALL:Q97L61) (279 aa) fasta
FT                   scores: E(): 5.9e-59, 60.21 38d in 279 aa"
FT                   /db_xref="GOA:A5HYB1"
FT                   /db_xref="InterPro:IPR003797"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB1"
FT                   /protein_id="CAL81770.1"
FT                   /translation="MEKIKIITDSTADLPKDIIEKYDIEVIPLFVSFGDKVYKDGVDIK
FT                   LEQLFTKIEKENVFPQTSQVNPQRFYEHYKKYIDKGYSIISIHISSKMSGTYQSACLAK
FT                   DMLDSDNITVIDSNNVTSGLGLLVIKACKLKDEGLSMEEIVKGVKETIPHIKSVLAFET
FT                   LDYLVKGGRLSKTAGFIGNVLGIKPILAVENGEMVVKDKVRGSKKAIRAIFEYIGKLGL
FT                   KQGEPCILLHVQNKDILGTLRENLNQDEANFIECTVGCVVGIYAGPRACGIFFIEDY"
FT   misc_feature    257478..258098
FT                   /note="Pfam match to entry PF02645 DUF194, Uncharacterized
FT                   protein, DegV family COG1307, score 260.5, E-value 2.3e-75"
FT                   /inference="protein motif:Pfam:PF02645"
FT   CDS_pept        258398..259501
FT                   /transl_table=11
FT                   /locus_tag="CBO0219"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Listeria monocytogenes cd4+ T
FT                   cell-stimulating antigen precursor tcsa or lmo1388
FT                   SWALL:TCSA_LISMO (SWALL:Q48754) (357 aa) fasta scores: E():
FT                   1.4e-30, 41.09 38d in 365 aa, and to Clostridium tetani
FT                   membrane lipoprotein TmpC precursor TmpC or ctc00369
FT                   SWALL:Q898S3 (EMBL:AE015937) (359 aa) fasta scores: E():
FT                   2e-65, 56.09 38d in 369 aa"
FT                   /db_xref="GOA:A5HYB2"
FT                   /db_xref="InterPro:IPR003760"
FT                   /db_xref="InterPro:IPR028082"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB2"
FT                   /protein_id="CAL81771.1"
FT                   /translation="MKKKKIIALLATAVMAVSLFAGCGSKDSAGEKSADKKEKIKIGLS
FT                   TDEGGLNDKSFNQSADAGVKKAQKELNVDYKPIESKQKEDYESNLEALVNDGSNLTFGI
FT                   GYQMEQAMTNVAKKYPDKNFAIVDTDKVTQPNVQCLTFKDHEGSFLMGVIAGKMTKTNK
FT                   VGFIGGKDSAAINKFEVGFIAGVKSVNPEAAKGLIGTKDKAGAMVKYADSFTDTNKGYE
FT                   LGKSLYGAGCDVVYHAAGGVGIGLFKSAKELNKPDKRIWAIGVDEDQAVKVSEYADIIL
FT                   SSMIKRVDAATFNATKEVVDGTFKGGKHIELGLKEDGVGIAPTSNKNTSKETLDLVQKY
FT                   KEAIKEGKIKVPATREELVKFTPTEIK"
FT   sig_peptide     258398..258482
FT                   /locus_tag="CBO0219"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.306 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    258431..259462
FT                   /note="Pfam match to entry PF02608 Bmp, Basic membrane
FT                   protein, score 270.6, E-value 2.1e-78"
FT                   /inference="protein motif:Pfam:PF02608"
FT   misc_feature    258434..258466
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        259685..261217
FT                   /transl_table=11
FT                   /locus_tag="CBO0220"
FT                   /product="ABC-transporter, ATP-binding protein"
FT                   /note="Similar to Clostridium acetobutylicum sugar
FT                   ABC-transporter, ATP-ase component cac0703 SWALL:Q97L59
FT                   (EMBL:AE007585) (514 aa) fasta scores: E(): 1.5e-128,75.78
FT                   38d in 508 aa"
FT                   /db_xref="GOA:A5HYB3"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB3"
FT                   /protein_id="CAL81772.1"
FT                   /translation="MEKVIEMKGITKVFPGTVANDDVSFDLNKSETHVLLGENGAGKTT
FT                   LMNVLYGLYQPEKGQIFVNGKEVKILGPNDAIKQGIGMVHQHFMLVHNFTVAENIVLGI
FT                   EPRKGLKIDINKAIKDVEKISKKYGFSIDPNAIIEDISVGQQQKVEILKALYRGAEILI
FT                   LDEPTAVLTPQEIDELGVIIDNLKKQGKSIILITHKLKEVMKMSDRVTIIRRGKITGIV
FT                   NTKETNIDQLAEFMVGRKVNLQMDKKPQNLGKEVLKVEDLQAKDRRGVNVLKGVNLSVR
FT                   EGEIVGIAGVDGNGQSEFIEVLTGLRKADAGSINLNEEEIFNKSSRQIIDKGVGHIPED
FT                   RHKRGLILKYSLYENSVLGKHHKAPFSKGIVMDYKAIRRHCNELIEEFDVRTPNDEVNA
FT                   SALSGGNQQKLIAAREISKDPNLLIASQPTRGLDVGAIEYIHKRLVAERDNGKAVLLVS
FT                   LELDEILSLSDRIAVMYDGKIIEILDRKDATEQKLGVLMAGGKLEDTRKEVK"
FT   misc_feature    259772..260332
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 167.4, E-value 2.5e-47"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    259793..259816
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    260105..260149
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   misc_feature    260531..261115
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 75.6, E-value 1.1e-19"
FT                   /inference="protein motif:Pfam:PF00005"
FT   CDS_pept        261219..262322
FT                   /transl_table=11
FT                   /locus_tag="CBO0221"
FT                   /product="ABC transporter, permease protein"
FT                   /note="Similar to Clostridium acetobutylicum sugar ABC
FT                   transporter, permease protein cac0704 SWALL:Q97L58
FT                   (EMBL:AE007585) (365 aa) fasta scores: E(): 1.9e-88,64.94
FT                   38d in 368 aa"
FT                   /db_xref="GOA:A5HYB4"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB4"
FT                   /protein_id="CAL81773.1"
FT                   /translation="MSENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGY
FT                   SITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEG
FT                   QFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIM
FT                   MNYLGLYLGNYIILRSRFSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVY
FT                   WLLWKTTVGYEIRAVGFNPSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQA
FT                   QDMMVLPGFGFDGIAVALLAKNNPIGCIASAILFGALNSSSKMLQLNGIPKQIVYLVQS
FT                   IIIIFVATDYIVKYFSEKKNRKVLING"
FT   sig_peptide     261219..261348
FT                   /locus_tag="CBO0221"
FT                   /note="probabilty 0.645, with cleavage site probability
FT                   0.373 between residues 44 and 45"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(261276..261344,261444..261497,261516..261584,
FT                   261594..261653,261690..261749,261837..261896,
FT                   261984..262052,262218..262286)
FT                   /note="8 probable transmembrane helices predicted for
FT                   CBO0221 by TMHMM2.0 at aa 20-42, 76-93, 100-122,
FT                   126-145,158-177, 207-226, 256-278 and 334-356"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    261429..262259
FT                   /note="Pfam match to entry PF02653
FT                   BPD_transp_2,Branched-chain amino acid transport system /
FT                   permease component, score 177.3, E-value 2.7e-50"
FT                   /inference="protein motif:Pfam:PF02653"
FT   CDS_pept        262315..263241
FT                   /transl_table=11
FT                   /locus_tag="CBO0222"
FT                   /product="ABC transporter, permease protein"
FT                   /note="Similar to Clostridium acetobutylicum sugar ABC
FT                   transporter, permease protein cac0705 SWALL:Q97L57
FT                   (EMBL:AE007585) (310 aa) fasta scores: E(): 5.9e-82,70.64
FT                   38d in 310 aa"
FT                   /db_xref="GOA:A5HYB5"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB5"
FT                   /protein_id="CAL81774.1"
FT                   /translation="MDSLIIIGLVTATLRTATPLVFAGLGGVFSERAGVVNIGLEGMMV
FT                   MGAFFSVYGTYLTGSPLVGIVFAIVAGALIALLHAFLSISLKADQVISGTAINLFSSAL
FT                   ASFLIFKIFKKGGQTDIVKALAYNVPASVKSIPIIGPILSGINWFVIIALILVFISHYI
FT                   LFKTPVGLRIRAVGEHPKAADTLGINVYKVRYLCVMLSGALAGLGGAALIGITPVYREG
FT                   MVAGRGFIALAAMIFGNWKPFGTMFACLLFAFGGSFEIFAQGFSWNLPSEFYSSIPYIL
FT                   TMLALAGFVGKTTPPAADGQPYEKNSR"
FT   misc_feature    order(262324..262392,262411..262470,262498..262566,
FT                   262585..262653,262738..262806,262900..262968,
FT                   262981..263034,263053..263121,263131..263184)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0222 by TMHMM2.0 at aa 4-26, 33-52, 62-84,
FT                   91-113,142-164, 196-218, 223-240, 247-269 and 273-290"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    262339..263172
FT                   /note="Pfam match to entry PF02653
FT                   BPD_transp_2,Branched-chain amino acid transport system /
FT                   permease component, score 176.5, E-value 4.6e-50"
FT                   /inference="protein motif:Pfam:PF02653"
FT   CDS_pept        263353..264078
FT                   /transl_table=11
FT                   /locus_tag="CBO0223"
FT                   /product="probable polysaccharide deacetylase"
FT                   /EC_number="3.-.-.-"
FT                   /note="Similar to Bacillus subtilis probable polysaccharide
FT                   deacetylase PdaA precursor PdaA or bsu07980
FT                   SWALL:PDAA_BACSU (SWALL:O34928) (263 aa) fasta scores: E():
FT                   1.1e-13, 34.95 38d in 206 aa, and to Clostridium
FT                   perfringens probable endo-1,4-beta-xylanase cpe1477
FT                   SWALL:Q8XKC3 (EMBL:AP003190) (238 aa) fasta scores: E():
FT                   8.6e-33, 44.58 38d in 240 aa"
FT                   /db_xref="GOA:A5HYB6"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="InterPro:IPR011330"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB6"
FT                   /protein_id="CAL81775.1"
FT                   /translation="MKKFLGKISISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLT
FT                   FDDGPSTNTNKVLDTLNEYNVKATFFLIGNQIKDQEEVVKRTQDEGHSIGLHTYTHDFK
FT                   KIYSNNQTFIDEMLKCQEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKVYDW
FT                   NVDCQDGMKPKMSPNRIFKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKG
FT                   YEFKTINNETPECYFPLRK"
FT   sig_peptide     263353..263446
FT                   /locus_tag="CBO0223"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.449 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    263455..263835
FT                   /note="Pfam match to entry PF01522
FT                   Polysacc_deacet,Polysaccharide deacetylase, score 140.8,
FT                   E-value 2.6e-39"
FT                   /inference="protein motif:Pfam:PF01522"
FT   CDS_pept        264407..265780
FT                   /transl_table=11
FT                   /gene="rpoN"
FT                   /gene_synonym="ntrA"
FT                   /gene_synonym="hno"
FT                   /locus_tag="CBO0224"
FT                   /product="RNA polymerase sigma-54 factor"
FT                   /note="Similar to Alcaligenes eutrophus RNA polymerase
FT                   sigma-54 factor RpoN or NtrA or Hno SWALL:RP54_ALCEU
FT                   (SWALL:P28615) (493 aa) fasta scores: E(): 6.6e-36, 33.6 id
FT                   in 494 aa, and to Clostridium tetani RNA polymerase
FT                   sigma-54 factor RpoN or ctc00376 SWALL:Q898R6
FT                   (EMBL:AE015937) (461 aa) fasta scores: E(): 2.6e-87,60.47
FT                   38d in 463 aa"
FT                   /db_xref="GOA:A5HYB7"
FT                   /db_xref="InterPro:IPR000394"
FT                   /db_xref="InterPro:IPR007046"
FT                   /db_xref="InterPro:IPR007634"
FT                   /db_xref="InterPro:IPR038709"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB7"
FT                   /protein_id="CAL81776.1"
FT                   /translation="MNMNFGLSLTQEQKLIMTQQMQLSIKLLQMSTYELQQYVEKEVQE
FT                   NPVLDSQNIHKEDKGIEDINYKKLIKHLEDNGNEYGSYSSYNKEEETSPFNFISNEKSL
FT                   KEYLQEQIIELNENKYIKSICIYIIENIDDKGYLSVRDEEISEELKVPLHSIEEAIDIV
FT                   QSLEPDGIGARNLKECLKIQLKKKSINNSKICEIIDNFLPLVAENRYNVISKKLSISIK
FT                   KAQEYGDVIKTLQPKPSRGFYTGDEVKYIVPDAYIKKIDNEYYIIMNEELLPKLTVNNL
FT                   YKDIVLNDTDENAVEFVKEKLNSAIFLIKSIENRKSTIYRVLEKILEIQRDYFDLGIKF
FT                   LKPMTLKEIADSLGMHESTISRAIRDKYINTNRGTILIKDLFTTGITANNSTGEDISVE
FT                   FIKREIKELIDKEDKKKPISDQIICNILNNKGIQISRRTVAKYREELGIQSSKCRKRF"
FT   misc_feature    264416..264565
FT                   /note="Pfam match to entry PF00309 sigma54_AID, Sigma-54
FT                   factor, Activator interacting domain (AID), score
FT                   65.6,E-value 1.1e-16"
FT                   /inference="protein motif:Pfam:PF00309"
FT   misc_feature    264671..265255
FT                   /note="Pfam match to entry PF04963 sigma54_CBD, Sigma-54
FT                   factor, core binding domain, score 105.7, E-value 9.5e-29"
FT                   /inference="protein motif:Pfam:PF04963"
FT   misc_feature    265289..265774
FT                   /note="Pfam match to entry PF04552 sigma54_DBD,
FT                   Sigma-54,DNA binding domain, score 249.7, E-value 4.1e-72"
FT                   /inference="protein motif:Pfam:PF04552"
FT   misc_feature    265433..265492
FT                   /note="PS00717 Sigma-54 factors family signature 1."
FT                   /inference="protein motif:ProSite:PS00717"
FT   misc_feature    265436..265501
FT                   /note="Predicted helix-turn-helix motif with score
FT                   2571.000, SD 7.94 at aa 344-365, sequence
FT                   MTLKEIADSLGMHESTISRAIR"
FT   misc_feature    265712..265735
FT                   /note="PS00718 Sigma-54 factors family signature 2."
FT                   /inference="protein motif:ProSite:PS00718"
FT   CDS_pept        266068..267099
FT                   /transl_table=11
FT                   /gene="cggR"
FT                   /locus_tag="CBO0225"
FT                   /product="central glycolytic genes regulator"
FT                   /note="Similar to Bacillus megaterium central glycolytic
FT                   genes regulator CggR SWALL:CGGR_BACME (SWALL:P35168) (342
FT                   aa) fasta scores: E(): 8.9e-45, 43.49 38d in 338 aa, and to
FT                   Thermoanaerobacter tengcongensis transcriptional regulator,
FT                   contains sigma factor-related N-terminal domain DeoR2 or
FT                   tte1763 SWALL:Q8R963 (EMBL:AE013129) (340 aa) fasta scores:
FT                   E(): 1e-59, 55.58 38d in 340 aa"
FT                   /db_xref="GOA:A5HYB8"
FT                   /db_xref="InterPro:IPR007324"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="InterPro:IPR037171"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB8"
FT                   /protein_id="CAL81777.1"
FT                   /translation="MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLE
FT                   IGERIVRTEINFLKSQSLIDINSSGMTVTKEGEEIIDRLKSFIHEVKGLKEIESILKNK
FT                   LEIFEVIIVPGNLDEDITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNMPKI
FT                   NTLKDAVVVPARGGIGRDVELQANTLVANLASKINANYKLMHVQDNLSEAALKAVMEEK
FT                   SIKEVLDMIHKVNILIHGIGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNI
FT                   VHSSPTIGIKRESIRNANKLIAVSGGKKKAKAILAAEVRNKNSVLITDEGAAREIINIL
FT                   ENE"
FT   misc_feature    266332..267081
FT                   /note="Pfam match to entry PF04198 Sugar-bind, Putative
FT                   sugar-binding domain, score 274.6, E-value 1.3e-79"
FT                   /inference="protein motif:Pfam:PF04198"
FT   CDS_pept        267177..268184
FT                   /transl_table=11
FT                   /gene="gap1"
FT                   /locus_tag="CBO0226"
FT                   /product="glyceraldehyde 3-phosphate dehydrogenase"
FT                   /EC_number="1.2.1.12"
FT                   /note="Similar to Bacillus megaterium glyceraldehyde
FT                   3-phosphate dehydrogenase Gap SWALL:G3P_BACME
FT                   (SWALL:P23722) (334 aa) fasta scores: E(): 4.3e-78, 64.86
FT                   id in 333 aa, and to Bacillus stearothermophilus
FT                   glyceraldehyde 3-phosphate dehydrogenase Gap
FT                   SWALL:G3P_BACST (SWALL:P00362) (334 aa) fasta scores: E():
FT                   4.1e-82, 69.06 38d in 333 aa"
FT                   /note="Also similar to CBO1095 (66.26 38d)"
FT                   /db_xref="GOA:A5HYB9"
FT                   /db_xref="InterPro:IPR006424"
FT                   /db_xref="InterPro:IPR020828"
FT                   /db_xref="InterPro:IPR020829"
FT                   /db_xref="InterPro:IPR020830"
FT                   /db_xref="InterPro:IPR020831"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYB9"
FT                   /protein_id="CAL81778.1"
FT                   /translation="MVKVAINGFGRIGRNVFKALVKNYKDQLQVVAINDLTSPATLAHL
FT                   LKYDSLYGKFDGTVEAKETSIVVNGNEIKIFAERDPKNIDWNSTGAEIVIESTGLFTDG
FT                   EKANAHLGGTVKKVLISAPAKNEDKTIVMGVNHEEYDPANHNIISNASCTTNCLAPFAK
FT                   VLDENFGIESGLMTTIHAYTGDQRVLDAPHKDLRRARAAAESMIPTTTGAAKAVALVLP
FT                   QLKGKLNGMAVRVPTPTVSLTDLVFTVKKDVTVEEINAALKKAAEGELKGILGYSEEPL
FT                   VSIDYRGDERSSIVDALSTSVIDNRLVKVVSWYDNEYGYSHRLADLTKFVADRL"
FT   misc_feature    267180..267635
FT                   /note="Pfam match to entry PF00044 gpdh, Glyceraldehyde
FT                   3-phosphate dehydrogenase, NAD binding domain, score 317.3,
FT                   E-value 1.9e-92"
FT                   /inference="protein motif:Pfam:PF00044"
FT   misc_feature    267627..267650
FT                   /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase
FT                   active site."
FT                   /inference="protein motif:ProSite:PS00071"
FT   misc_feature    267636..268118
FT                   /note="Pfam match to entry PF02800 gpdh_C, Glyceraldehyde
FT                   3-phosphate dehydrogenase, C-terminal domain, score
FT                   395.2,E-value 6.6e-116"
FT                   /inference="protein motif:Pfam:PF02800"
FT   CDS_pept        268482..269678
FT                   /transl_table=11
FT                   /gene="pgK"
FT                   /locus_tag="CBO0227"
FT                   /product="phosphoglycerate kinase"
FT                   /EC_number="2.7.2.3"
FT                   /note="Similar to Bacillus megaterium phosphoglycerate
FT                   kinase Pgk SWALL:PGK_BACME (SWALL:P24269) (394 aa) fasta
FT                   scores: E(): 2.4e-80, 57.07 38d in 396 aa, and to
FT                   Clostridium acetobutylicum phosphoglycerate kinase Pgk or
FT                   cac0710 SWALL:PGK_CLOAB (SWALL:O52632) (397 aa) fasta
FT                   scores: E(): 5.4e-110, 77.44 38d in 399 aa"
FT                   /db_xref="GOA:A5HYC0"
FT                   /db_xref="InterPro:IPR001576"
FT                   /db_xref="InterPro:IPR015824"
FT                   /db_xref="InterPro:IPR015911"
FT                   /db_xref="InterPro:IPR036043"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYC0"
FT                   /protein_id="CAL81779.1"
FT                   /translation="MNYNKKSIEDIDVKGKKVLVRCDFNVPLNEGKITDENRLVGALPT
FT                   IKYLMEKGAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAK
FT                   KAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGV
FT                   TNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLII
FT                   GGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDA
FT                   SPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVA
FT                   KAMADSDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALNDK"
FT   misc_feature    268488..269675
FT                   /note="Pfam match to entry PF00162 PGK, Phosphoglycerate
FT                   kinase, score 784.8, E-value 3.6e-233"
FT                   /inference="protein motif:Pfam:PF00162"
FT   misc_feature    268530..268562
FT                   /note="PS00111 Phosphoglycerate kinase signature."
FT                   /inference="protein motif:ProSite:PS00111"
FT   misc_feature    268545..268592
FT                   /note="PS00453 FKBP-type peptidyl-prolyl cis-trans
FT                   isomerase signature 1."
FT                   /inference="protein motif:ProSite:PS00453"
FT   CDS_pept        269740..270486
FT                   /transl_table=11
FT                   /gene="tpiA"
FT                   /gene_synonym="tpi"
FT                   /locus_tag="CBO0228"
FT                   /product="triosephosphate isomerase"
FT                   /EC_number="5.3.1.1"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   triosephosphate isomerase TpiA or Tpi or cac0711
FT                   SWALL:TPIS_CLOAB (SWALL:O52633) (248 aa) fasta scores: E():
FT                   8e-66, 73.79 38d in 248 aa, and to Bacillus megaterium
FT                   triosephosphate isomerase TpiA or Tpi SWALL:TPIS_BACME
FT                   (SWALL:P35144) (251 aa) fasta scores: E(): 8.1e-50, 57.61
FT                   38d in 243 aa"
FT                   /db_xref="GOA:A5HYC1"
FT                   /db_xref="InterPro:IPR000652"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="InterPro:IPR020861"
FT                   /db_xref="InterPro:IPR022896"
FT                   /db_xref="InterPro:IPR035990"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC1"
FT                   /protein_id="CAL81780.1"
FT                   /translation="MRTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVC
FT                   LPAVLEEVKGSNIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNET
FT                   DETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVI
FT                   AYEPIWAIGTGKTATDEQANETIGYIRTVVKAMYGESVADKVRIQYGGSVKPGTIKAQM
FT                   AKEEIDGALVGGASLKAEDFAAIVNY"
FT   misc_feature    269743..270480
FT                   /note="Pfam match to entry PF00121 TIM, Triosephosphate
FT                   isomerase, score 445.6, E-value 4.6e-131"
FT                   /inference="protein motif:Pfam:PF00121"
FT   misc_feature    270229..270261
FT                   /note="PS00171 Triosephosphate isomerase active site."
FT                   /inference="protein motif:ProSite:PS00171"
FT   CDS_pept        270578..272107
FT                   /transl_table=11
FT                   /gene="gpmI"
FT                   /gene_synonym="pgm-I"
FT                   /locus_tag="CBO0229"
FT                   /product="2,3-bisphosphoglycerate-independent
FT                   phosphoglycerate mutase"
FT                   /EC_number="5.4.2.1"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   2,3-bisphosphoglycerate-independent phosphoglycerate mutase
FT                   GpmI or Pgm-I or cac0712 SWALL:GPMI_CLOAB (SWALL:Q97L53)
FT                   (510 aa) fasta scores: E(): 9.7e-149,74.75 38d in 511 aa,
FT                   and to Bacillus megaterium
FT                   2,3-bisphosphoglycerate-independent phosphoglycerate mutase
FT                   GpmI or Pgm SWALL:GPMI_BACME (SWALL:P35167) (511 aa) fasta
FT                   scores: E(): 6.8e-108, 58.17 38d in 514 aa"
FT                   /db_xref="GOA:A5HYC2"
FT                   /db_xref="InterPro:IPR005995"
FT                   /db_xref="InterPro:IPR006124"
FT                   /db_xref="InterPro:IPR011258"
FT                   /db_xref="InterPro:IPR017850"
FT                   /db_xref="InterPro:IPR036646"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC2"
FT                   /protein_id="CAL81781.1"
FT                   /translation="MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQL
FT                   GASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIKNV
FT                   KKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEY
FT                   IEDIENYMNEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEK
FT                   SYRDNKTDEFVLPSVVLKEGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFER
FT                   ETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFF
FT                   FNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANP
FT                   DMVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMT
FT                   AHTTNPVPFMYVSKNSKELREGGKLADIAPTMLQLMNLPKPSEMTGNSLIK"
FT   misc_feature    271685..272035
FT                   /note="Pfam match to entry PF01676
FT                   Metalloenzyme,Metalloenzyme superfamily, score 169.4,
FT                   E-value 6.1e-48"
FT                   /inference="protein motif:Pfam:PF01676"
FT   CDS_pept        272163..273458
FT                   /transl_table=11
FT                   /gene="eno"
FT                   /locus_tag="CBO0230"
FT                   /product="enolase"
FT                   /EC_number="4.2.1.11"
FT                   /note="Similar to Bacillus subtilis enolase Eno or bsu33900
FT                   SWALL:ENO_BACSU (SWALL:P37869) (430 aa) fasta scores: E():
FT                   1.6e-106, 70.49 38d in 427 aa, and to Clostridium tetani
FT                   enolase ctc00382 SWALL:Q898R0 (EMBL:AE015937) (431 aa)
FT                   fasta scores: E(): 3.8e-131,86.54 38d in 431 aa"
FT                   /db_xref="GOA:A5HYC3"
FT                   /db_xref="InterPro:IPR000941"
FT                   /db_xref="InterPro:IPR020809"
FT                   /db_xref="InterPro:IPR020810"
FT                   /db_xref="InterPro:IPR020811"
FT                   /db_xref="InterPro:IPR029017"
FT                   /db_xref="InterPro:IPR036849"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC3"
FT                   /protein_id="CAL81782.1"
FT                   /translation="MKNYIEIVDVYARQILDSRCNPTVEVEVELEDGTVGVAAVPSGAS
FT                   TGAFEAVELRDGDKSKYLGKGVLKAVDNVNTIIADELVGMNVLDQVAIDKTMIELDGTD
FT                   NKAKLGANAMLGVSLACAKAAANSLGISLYQYIGGVNGKVLPVPMMNIINGGKHADNNV
FT                   DLQEFMIMPAGAPSFSEALRMCSEVYHALKSTLKAQGYDTGVGDEGGFAPNLKSNEEAI
FT                   VVIIEAIKKAGYTPGEDIFIALDPASSEIFEDGKYNLAGEGRVLTPEEMANYYVELAEK
FT                   YPIISIEDGMAEEDWDGWKILTEKIGNKVQLVGDDLFVTNTERLSKGIKLGVANSILIK
FT                   LNQIGTLTETLNAIEMAERAGYTAVVSHRSGETEDTTIADLVVAVNAGQIKTGAPARSE
FT                   RVAKYNQLLRIEEELNDMGEYRGLKAFYNINK"
FT   misc_feature    272178..272573
FT                   /note="Pfam match to entry PF03952 enolase_N,
FT                   Enolase,N-terminal domain, score 236.6, E-value 3.7e-68"
FT                   /inference="protein motif:Pfam:PF03952"
FT   misc_feature    272586..273449
FT                   /note="Pfam match to entry PF00113 enolase,
FT                   Enolase,C-terminal TIM barrel domain, score 604.6, E-value
FT                   6.1e-179"
FT                   /inference="protein motif:Pfam:PF00113"
FT   misc_feature    273171..273212
FT                   /note="PS00164 Enolase signature."
FT                   /inference="protein motif:ProSite:PS00164"
FT   CDS_pept        273681..273914
FT                   /transl_table=11
FT                   /gene="secG"
FT                   /locus_tag="CBO0231"
FT                   /product="probable protein-export membrane protein"
FT                   /note="Similar to Bacillus subtilis probable protein-export
FT                   membrane protein SecG or bsu33630 SWALL:SECG_BACSU
FT                   (SWALL:O32233) (76 aa) fasta scores: E(): 9.3e-10, 49.29
FT                   38d in 71 aa, and to Clostridium perfringens probable
FT                   protein-export membrane protein SecG or cpe1297
FT                   SWALL:Q8XKU5 (EMBL:AP003190) (76 aa) fasta scores: E():
FT                   4.7e-10, 44 38d in 75 aa"
FT                   /db_xref="GOA:A5HYC4"
FT                   /db_xref="InterPro:IPR004692"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC4"
FT                   /protein_id="CAL81783.1"
FT                   /translation="MHTFSIVLLTIVSITLIVVVLMQPSKTNGLSGFMGGGSETFYSKN
FT                   RTRTSESVLSRITVVCSILFAIIVLAQNLLSK"
FT   sig_peptide     273681..273759
FT                   /gene="secG"
FT                   /locus_tag="CBO0231"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.530 between residues 27 and 28"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    273684..273911
FT                   /note="Pfam match to entry PF03840 SecG, Preprotein
FT                   translocase SecG subunit, score 77.9, E-value 2.2e-20"
FT                   /inference="protein motif:Pfam:PF03840"
FT   misc_feature    order(273690..273743,273837..273905)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0231 by TMHMM2.0 at aa 4-21 and 53-75"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        274123..276300
FT                   /transl_table=11
FT                   /gene="rnr"
FT                   /gene_synonym="vacB"
FT                   /locus_tag="CBO0232"
FT                   /product="ribonuclease R"
FT                   /EC_number="3.1.-.-"
FT                   /note="Similar to Bacillus subtilis ribonuclease R Rnr or
FT                   VacB or bsu33610 SWALL:RNR_BACSU (SWALL:O32231) (779 aa)
FT                   fasta scores: E(): 1e-143, 54.55 38d in 702 aa, and to
FT                   Clostridium acetobutylicum fusion ribonuclease and
FT                   ribosomal protein S1 domain cac0715 SWALL:Q97L50
FT                   (EMBL:AE007586) (730 aa) fasta scores: E(): 2e-197, 72.08
FT                   id in 720 aa"
FT                   /db_xref="GOA:A5HYC5"
FT                   /db_xref="InterPro:IPR001900"
FT                   /db_xref="InterPro:IPR003029"
FT                   /db_xref="InterPro:IPR004476"
FT                   /db_xref="InterPro:IPR011129"
FT                   /db_xref="InterPro:IPR011805"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="InterPro:IPR013223"
FT                   /db_xref="InterPro:IPR022967"
FT                   /db_xref="InterPro:IPR040476"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC5"
FT                   /protein_id="CAL81784.1"
FT                   /translation="MNIRETILAFMEEQAYKPMDIKELKQVFGVTKHEYKEFEKMLKDM
FT                   EKDGQIVKTRTEHYGIPARMGLVLGKLQGHQKGFGFVIPEEEREDIFIPASSMNGAMHT
FT                   DRVLAKITKESANGKRCEGEIIRILERGNKTVIGIYEDSKNFGFVVSDDKKIYQDIFIP
FT                   KGDKNGAKTGQVVIAEIVTYPEKRRNPEGRVIEILGNKEDKGIDILTIIKKNKLPEEFP
FT                   PKVQSYADNISEAIPEEEYKRREDLRDLTIVTIDGEDAKDLDDAISLEKLPNGNYYLGV
FT                   HIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKLSNGICSLNPKIDRLTLSCF
FT                   MEIDKNGKVVDHRVVESIIKSTERMTYTDVTKILRDEDEETINKYSNLVDYFKLMEELC
FT                   KILYKKRLKRGAIDFDFEECKIILDEKGKPIEIKPYERAIANRIIEEFMLVCNETIAEH
FT                   MFWSNLPFVYRIHEDPDEEKLMHFNEFVHNLGYVIRWNNDIHPKSLQSIIEKVKGEKEE
FT                   TVVSTLLLRSLKQARYSPECIGHFGLAARYYCHFTSPIRRYPDLIIHRIIKEYINGQID
FT                   DKRATKLTTEVEYASKQSSEMERVAQEAEREVDDLKKAEYMSERIGEEYEGIISSVTNF
FT                   GMFVELPNTIEGLVHISTLSDDYYIYDERRLSLIGEASKNIYRLGDTVKIKVSKVDLFS
FT                   HEIYFDIIKDNEEDKEEVEFIEETEKYNTNL"
FT   misc_feature    274348..274401
FT                   /note="Pfam match to entry PF00313 CSD, 'Cold-shock'
FT                   DNA-binding domain, score 11.8, E-value 0.0081"
FT                   /inference="protein motif:Pfam:PF00313"
FT   misc_feature    274618..275727
FT                   /note="Pfam match to entry PF00773 RNB, RNB-like
FT                   protein,score 490.3, E-value 1.5e-144"
FT                   /inference="protein motif:Pfam:PF00773"
FT   misc_feature    275974..276228
FT                   /note="Pfam match to entry PF00575 S1, S1 RNA binding
FT                   domain, score 63.1, E-value 6.3e-16"
FT                   /inference="protein motif:Pfam:PF00575"
FT   CDS_pept        276709..277467
FT                   /transl_table=11
FT                   /gene="surE"
FT                   /locus_tag="CBO0233"
FT                   /product="acid phosphatase"
FT                   /EC_number="3.1.3.2"
FT                   /note="Similar to Escherichia coli, Escherichia coli O6,and
FT                   Escherichia coli O157:H7 acid phosphatase SurE or b2744 or
FT                   c3311 or z4052 or ecs3598 SWALL:SURE_ECOLI (SWALL:P36664)
FT                   (253 aa) fasta scores: E(): 3.2e-23, 38.01 id in 242 aa,
FT                   and to Clostridium tetani acid phosphatase sure sureSurEid
FT                   in 252 aa"
FT                   /db_xref="GOA:A5HYC6"
FT                   /db_xref="InterPro:IPR002828"
FT                   /db_xref="InterPro:IPR030048"
FT                   /db_xref="InterPro:IPR036523"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYC6"
FT                   /protein_id="CAL81785.1"
FT                   /translation="MNILLTNDDGIEAEGINTLAELLSKYHDVIMVAPENQRSASSHSI
FT                   TIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALDKLVPDNIDMVISGINKGLNIGNDI
FT                   LYSGTVSAAIEGAMYKVPSMAVSAQFIKNKKENYKIAAKYALRMLNRLKKEDLKNDVVL
FT                   NLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYY
FT                   IRNKYVTLTPLHYDLTNFNILEETEQLFLS"
FT   misc_feature    276709..277284
FT                   /note="Pfam match to entry PF01975 SurE, Survival protein
FT                   SurE, score 251.7, E-value 1.1e-72"
FT                   /inference="protein motif:Pfam:PF01975"
FT   CDS_pept        277724..278194
FT                   /transl_table=11
FT                   /gene="smpB"
FT                   /gene_synonym="smqB"
FT                   /locus_tag="CBO0234"
FT                   /product="SsrA-binding protein"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Escherichia coli O157:H7, and Shigella flexneri
FT                   SsrA-binding protein SmpB or SmqB or b2620 or c3142 or
FT                   z3913 or ecs3482 or sf2679 or s2857 SWALL:SSRP_ECOLI
FT                   (SWALL:P32052) (159 aa) fasta scores: E(): 9.8e-21, 45.8 id
FT                   in 155 aa, and to Clostridium tetani SsrA-binding protein
FT                   SmpB or ctc00385 SWALL:Q898Q7 (EMBL:AE015937) (156 aa)
FT                   fasta scores: E(): 2.1e-46, 80.76 38d in 156 aa"
FT                   /db_xref="GOA:A5HYC7"
FT                   /db_xref="InterPro:IPR000037"
FT                   /db_xref="InterPro:IPR020081"
FT                   /db_xref="InterPro:IPR023620"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYC7"
FT                   /protein_id="CAL81786.1"
FT                   /translation="MSKKKGSNTLAENRKARHDYFIEETYEAGIELVGTEVKSIRQGKA
FT                   NLKDSYAEIRNGEVFVRNMHISPYEQGNIYNKDPLRDRKLLLHKSEIYKLVGFTTQQGY
FT                   TLIPLSLYLKHGRVKVSLAVAKGKKNYDKRDAMLEKAAKREMDRQIKERSRY"
FT   misc_feature    277745..277948
FT                   /note="Pfam match to entry PF01668 SmpB, SmpB protein,score
FT                   165.2, E-value 1.2e-46"
FT                   /inference="protein motif:Pfam:PF01668"
FT   misc_feature    277805..277843
FT                   /note="PS01317 Protein smpB signature."
FT                   /inference="protein motif:ProSite:PS01317"
FT   repeat_region   278285..278317
FT   CDS_pept        complement(278333..279496)
FT                   /transl_table=11
FT                   /locus_tag="CBO0235"
FT                   /product="sodium:dicarboxylate symporter family protein"
FT                   /note="Similar to Clostridium perfringens probable
FT                   glutamate/ aspartate transporter cpe0967 SWALL:Q8XLS4
FT                   (EMBL:AP003188) (387 aa) fasta scores: E(): 3.2e-120,84.23
FT                   38d in 387 aa"
FT                   /db_xref="GOA:A5HYC8"
FT                   /db_xref="InterPro:IPR001991"
FT                   /db_xref="InterPro:IPR036458"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC8"
FT                   /protein_id="CAL81787.1"
FT                   /translation="MKKLFNNLIFKLVLGVIIGILIGSYASKPAIGVVITIKYILGQII
FT                   FFAVPLIILGFITPSIAKLKQNASKFVGITVLIAYISSVAAAFLSMVAGYVLIPKLSIA
FT                   SNPEGLKKLPELVFKLDIPPIMSVMSALALALLLGLATGWTNSDLIEKILDQFQNIILS
FT                   IVNKVIIPILPFFIATNFAALAYEGSLSTQLPIFLKVIIIVLIGHFIWLTVLYLVGGAI
FT                   SKENPWEVLKHYGPAYLTAVGTMSSAATLPVALKSAKKSKVLREDIVDFAIPLCSNIHL
FT                   CGSVLTEVFFVMTVSQILYGKLPAFSTMLLFILLLGIFAIGAPGVPGGTVMASLGLIIS
FT                   VLAFNEAGTALILTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL"
FT   misc_feature    complement(278354..279475)
FT                   /note="Pfam match to entry PF00375 SDF,Sodium:dicarboxylate
FT                   symporter family, score -112.2,E-value 9.7e-06"
FT                   /inference="protein motif:Pfam:PF00375"
FT   misc_feature    complement(order(278423..278491,278534..278602,
FT                   278621..278689,278732..278791,278828..278896,
FT                   278939..279007,279065..279133,279218..279286,
FT                   279323..279382,279392..279460))
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0235 by TMHMM2.0 at aa 13-35, 39-58, 71-93,
FT                   122-144,164-186, 201-223, 236-255, 270-292, 299-321 and
FT                   336-358"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(279415..279496)
FT                   /locus_tag="CBO0235"
FT                   /note="probabilty 0.986, with cleavage site probability
FT                   0.487 between residues 26 and 27"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_RNA        280319..280651
FT                   /note="tmRNA"
FT   repeat_region   281092..281126
FT                   /rpt_family="CB.504"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="tttaatatttttattttagtatttgtaaatagatg"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        281431..282762
FT                   /transl_table=11
FT                   /locus_tag="CBO0237"
FT                   /product="putative FAD-binding oxidoreductase"
FT                   /note="Similar to Streptomyces sp. JP95 putative
FT                   fad-binding oxidoreductase Grho1 grho1 SWALL:Q8KSY2
FT                   (EMBL:AF509565) (467 aa) fasta scores: E(): 2.5e-25,30.81
FT                   38d in 464 aa, and to Bacillus cereus FAD-dependent oxidase
FT                   bc0412 SWALL:Q81IH6 (EMBL:AE016999) (444 aa) fasta scores:
FT                   E(): 5.9e-95, 52.16 38d in 439 aa"
FT                   /db_xref="GOA:A5HYC9"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="InterPro:IPR012951"
FT                   /db_xref="InterPro:IPR016166"
FT                   /db_xref="InterPro:IPR016167"
FT                   /db_xref="InterPro:IPR036318"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYC9"
FT                   /protein_id="CAL81788.1"
FT                   /translation="MTKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVIN
FT                   AVKWARKNCVPIHTRCGGHSYEAFSILNNGIVIDVSEMNKVLLEKENMEVTIEAGATLL
FT                   PIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVV
FT                   YADRCVNSDLFWASCGGGGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAKEIIKTWQD
FT                   WAPFVDERLTSILEIFTEKDGRISSSGEFLGHEDQLRCLLRPLTSVGNPIQIEIQTIPY
FT                   IEAVIKFDGGPGPHKFKNTGAFVYHRLPDKAIDTLLCYMGISPNKDNSIQFQSLGGAVR
FT                   DILPDETAYFHREASYIMQYITHWKVDNEKNPNIFWVEKLRQAMLKYVNGTYVNWPDIF
FT                   IKDWPCAYYGTNYYELMRIKSKYDPENIFYFEQSIRPAKKRNYR"
FT   misc_feature    281521..281979
FT                   /note="Pfam match to entry PF01565 FAD_binding_4, FAD
FT                   binding domain, score 148.5, E-value 1.2e-41"
FT                   /inference="protein motif:Pfam:PF01565"
FT   CDS_pept        complement(282837..283226)
FT                   /transl_table=11
FT                   /locus_tag="CBO0238"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD0"
FT                   /protein_id="CAL81789.1"
FT                   /translation="MKVTILNTKGRPKKYSDQQIVACMLYGVKNSIFSLRELECKIKQD
FT                   PIFPAIVNLKEVPDYSTLSTIYAAIISFNEVILPVPGGPFIENTLPSSGSFEYVKPTTN
FT                   LWLVSYWWRRNMVGEIHYTELNFGH"
FT   CDS_pept        283372..283599
FT                   /transl_table=11
FT                   /locus_tag="CBO0239"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD1"
FT                   /protein_id="CAL81790.1"
FT                   /translation="MSNYCCLNEESQEFKSLIFNAGTMNDGTGSIPDTVPLGNANSSIR
FT                   ILGWLLPQGDTDEYPLTFCMANNPPKIQKL"
FT   CDS_pept        complement(283613..283762)
FT                   /transl_table=11
FT                   /locus_tag="CBO0240"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD2"
FT                   /protein_id="CAL81791.1"
FT                   /translation="MKADKTFNAIKYRKGRHMPALELELEYEDKPYEERQSKIHSKIYL
FT                   NHAA"
FT   CDS_pept        complement(284038..284325)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CBO0240B"
FT                   /product="putative transcriptional regulator (partial)"
FT                   /note="This CDS lacks N-terminal region present in database
FT                   matches"
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL81792.1"
FT   CDS_pept        284737..286161
FT                   /transl_table=11
FT                   /locus_tag="CBO0241"
FT                   /product="pyridoxal-dependent decarboxylase"
FT                   /note="Similar to Catharanthus roseus aromatic-L-amino-acid
FT                   decarboxylase tdC SWALL:DDC_CATRO (SWALL:P17770) (500 aa)
FT                   fasta scores: E(): 9.8e-22, 22.05 id in 458 aa"
FT                   /db_xref="GOA:A5HYD4"
FT                   /db_xref="InterPro:IPR002129"
FT                   /db_xref="InterPro:IPR010977"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD4"
FT                   /protein_id="CAL81793.1"
FT                   /translation="MDINLKNDLENIDILLEKVTINAFDFLKDINEIATFPKSTNAYTL
FT                   SQLNKDGLGGEKTLEEFMQRFYKGIVSCAGSKYFNFVTGGTTTAALMGDWLVSTFDQNA
FT                   TGRDTSSAAKLEEETINLLKQLLVLPETYSGTFVTGATMANFVGLAIGRQWLANELGVN
FT                   IAIDGLYSIPPIRIVSSTPHSSILKALSMLGMGRKNMHYIPTIDGREAIDVEALESYLK
FT                   KLNGEPCIVVANAGTVNTVDFDDLKQIGELKEKYNFFLHVDGAFGGFASCSIKYKKLVE
FT                   GIEAADSITIDAHKWLNVPYDSAMQFTKHPKLQIQVFQNNAVYLGELSDKPDFVHLTPE
FT                   NSRRLRALPAWFTLKAYGQNGYQEIIERNCNLAQLLSKKIDESKNFSLLSTTRLNVVCF
FT                   TINLENDNVNLEQIQQFLNLVNKDGRAFFTQTVYKGIAGIRAAISNWRTEEKDIEIAWE
FT                   VLNKAYESYYETITVD"
FT   misc_feature    284863..285942
FT                   /note="Pfam match to entry PF00282
FT                   pyridoxal_deC,Pyridoxal-dependent decarboxylase conserved
FT                   domain, score 60.7, E-value 6.4e-19"
FT                   /inference="protein motif:Pfam:PF00282"
FT   CDS_pept        286349..287200
FT                   /transl_table=11
FT                   /locus_tag="CBO0242"
FT                   /product="flagellin"
FT                   /note="Similar to Bacillus halodurans flagellin Hag or
FT                   bh3616 SWALL:FLA_BACHD (SWALL:Q05203) (272 aa) fasta
FT                   scores: E(): 1e-39, 49.82 38d in 279 aa, and to Clostridium
FT                   acetobutylicum flagellin FlaC or cac2203 SWALL:O69136
FT                   (EMBL:AF064086) (275 aa) fasta scores: E(): 3e-41, 50.17
FT                   38d in 279 aa"
FT                   /db_xref="GOA:A5HYD5"
FT                   /db_xref="InterPro:IPR001029"
FT                   /db_xref="InterPro:IPR001492"
FT                   /db_xref="InterPro:IPR042187"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD5"
FT                   /protein_id="CAL81794.1"
FT                   /translation="MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAG
FT                   LAISEKMRAQIRGLEMASRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSP
FT                   EDRKNIQDEINQLTRGIDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGIKLQ
FT                   NMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRIN
FT                   YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSL
FT                   NN"
FT   misc_feature    286427..286861
FT                   /note="Pfam match to entry PF00669 Flagellin_N, Bacterial
FT                   flagellin N-terminus, score 241.0, E-value 1.8e-69"
FT                   /inference="protein motif:Pfam:PF00669"
FT   misc_feature    286904..287119
FT                   /note="Pfam match to entry PF00700 Flagellin_C, Bacterial
FT                   flagellin C-terminus, score 95.3, E-value 1.3e-25"
FT                   /inference="protein motif:Pfam:PF00700"
FT   CDS_pept        287559..289178
FT                   /transl_table=11
FT                   /locus_tag="CBO0243"
FT                   /product="putative peroxidase"
FT                   /note="Similar to Ascophyllum nodosum vanadium
FT                   haloperoxidase SWALL:PRXV_ASCNO (SWALL:P81701) (557 aa)
FT                   fasta scores: E(): 5.9e-25, 34.79 38d in 523 aa, and to
FT                   Laminaria digitata vanadium-dependent bromoperoxidase 2
FT                   VbpO2 SWALL:CAD37192 (EMBL:AJ491787) (682 aa) fasta scores:
FT                   E(): 6.3e-37, 36.1 38d in 518 aa"
FT                   /db_xref="GOA:A5HYD6"
FT                   /db_xref="InterPro:IPR000326"
FT                   /db_xref="InterPro:IPR016119"
FT                   /db_xref="InterPro:IPR036938"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD6"
FT                   /protein_id="CAL81795.1"
FT                   /translation="MEEKQDKNIEKYESEDKVCITKPSCPKYNTIINQCEIGPLTPEQR
FT                   RSEAFEKRSQSASFQKDLILQGQRCNDDEILYVNKIGNNTKALPHNVLGEVNLEAYNIL
FT                   ISALTTGNPEKFELIPLGGTRKFSDPQAAYAYEMVGPDSHHLTIAPAPSFSSAIEASEM
FT                   AEDYWMALTRDVPFVDYDTSPETKTAAEDLSKFSAYDGPKCKGKVTTETLFRSNVPDTL
FT                   EGPYVSQFLLKDIPFGAKTITQKYTVPVEKINYMTSYNEWLNIQNGQAPSSILKLDPVP
FT                   RYISNGRDLGEYVHKDSSIQATLMACSILLGFGQEALSLSNPYLFSKTQEGFATFGSPH
FT                   VLDFATRASRMSLEAAWFQKFLVHRRLRPEEFGGCVQNLKTGDAKYPINPELLDSKVLE
FT                   IVFKKYGTYLLPMAYTEGCPTHPAYPAGHATHIGAGVTILKAFFNEDYIIPNPVVASAD
FT                   GLDLQPYLEGDLKVGGELNKLATNIALGRDFAGVHWRSDCLEGMKLGEAVAIGLLQDYR
FT                   NTYNEELRGFSFTKFDGTKVII"
FT   repeat_region   289202..289234
FT                   /rpt_family="CB.346"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="agtattagagcaggtagtcatcggataaattta"
FT                   /inference="ab initio prediction:REPuter"
FT   repeat_region   289393..289427
FT                   /rpt_family="CB.504"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="tttaatatttttattttagtatttgtaaatagatg"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        289562..290221
FT                   /transl_table=11
FT                   /locus_tag="CBO0244"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus subtilis hypothetical protein
FT                   yrkc or bsu26560 SWALL:YRKC_BACSU (SWALL:P54430) (186 aa)
FT                   fasta scores: E(): 5.7e-41, 61.45 38d in 192 aa, and to
FT                   Clostridium tetani conserved protein ctc01899 SWALL:Q893C8
FT                   (EMBL:AE015942) (193 aa) fasta scores: E(): 1.1e-40,59.09
FT                   38d in 220 aa"
FT                   /db_xref="InterPro:IPR011051"
FT                   /db_xref="InterPro:IPR013096"
FT                   /db_xref="InterPro:IPR014710"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD7"
FT                   /protein_id="CAL81796.1"
FT                   /translation="MYNTYMMYPCSYCANIPMYNSYGMYSPYDTYSCPCFVDTPRSYND
FT                   SDFSMQRSNRYIPFTDEFEYGSRFGSPQSANSNSPIELKDYGPQPFVVNINEATKRNNT
FT                   FRTALWTGTHLQVTLMSINVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSSKDRLNFRAK
FT                   AYDDFAIMIPAGTWHNIINTGNRPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH"
FT   CDS_pept        290562..291671
FT                   /transl_table=11
FT                   /locus_tag="CBO0245"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   membrane protein cac0739 SWALL:Q97L27 (EMBL:AE007589) (368
FT                   aa) fasta scores: E(): 1.8e-33, 41.42 38d in 379 aa"
FT                   /db_xref="GOA:A5HYD8"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD8"
FT                   /protein_id="CAL81797.1"
FT                   /translation="MINIIKTAIITIIISFISGLLLDRYKNLAPRILCNIGKGIPIEIN
FT                   NKKFNAYIITVRNVSSKIIHDITLHVQNGQSNLKITDAKITKGLKFDSSIEDNILDVCI
FT                   PFLSKDDEFSVTVYVENQHGVHNKPAVIIRSPEKFKEVNSEERKGIFSIFTNIPKNIKE
FT                   IVSDATKKDETINERNREITNKNNKLGKNKKIMIMAASVALVVIVGGVARFYFKGKPAD
FT                   TNTKTPSVETKVLKQSKDSKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKK
FT                   PSTGGTNGNTNKKPSTGDTNKSPSTSDTTGNKDGDSSKDGTTNGKTDGDSSNSGTTNDG
FT                   DKNPSTGGGTTGNTDEKPSTDGTKGDTGN"
FT   misc_feature    order(290571..290627,291141..291209)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0245 by TMHMM2.0 at aa 4-22 and 194-216"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        292173..293345
FT                   /transl_table=11
FT                   /locus_tag="CBO0246"
FT                   /product="NAD-dependent malic enzyme"
FT                   /EC_number="1.1.1.40"
FT                   /note="Similar to Corynebacterium melassecola malic enzyme
FT                   MalE SWALL:Q9KIF8 (EMBL:AF234535) (392 aa) fasta scores:
FT                   E(): 3.3e-63, 52.91 38d in 378 aa, and to Escherichia coli
FT                   NADP-dependent malic enzyme MaeB or b2463 SWALL:MAO2_ECOLI
FT                   (SWALL:P76558) (759 aa) fasta scores: E(): 2.7e-57, 48.88
FT                   id in 403 aa"
FT                   /note="Also similar to CBO0210 (66.6 38d)"
FT                   /db_xref="GOA:A5HYD9"
FT                   /db_xref="InterPro:IPR001891"
FT                   /db_xref="InterPro:IPR012301"
FT                   /db_xref="InterPro:IPR012302"
FT                   /db_xref="InterPro:IPR015884"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="InterPro:IPR037062"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYD9"
FT                   /protein_id="CAL81798.1"
FT                   /translation="MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCR
FT                   KIHENEENVYKYTSKGNMVAVVTDGTAVLGLGDIGPKAGLPVMEGKALLFKEFANVDAF
FT                   PICLDTKDVDEIVKTVKLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQHGT
FT                   AIVVLAGVINALKVVNKKIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKVGILYE
FT                   GIENVDDAKKELSKVTNPENIKGTLADALIGADVFIGVSAPGIVSKDMVETMNKDSIIF
FT                   AMANPTPEIMPDLAKEAGAKVIGTGRSDFPNQVNNVLAFPGIFKGALDVRAKEINEEMK
FT                   IAAAYAIASMIKDKDLNEDNVIPYALDRSVADNVAKAIKEAARKSGVARV"
FT   misc_feature    292218..292646
FT                   /note="Pfam match to entry PF00390 malic, Malic
FT                   enzyme,N-terminal domain, score 296.5, E-value 3.3e-86"
FT                   /inference="protein motif:Pfam:PF00390"
FT   misc_feature    292638..292688
FT                   /note="PS00331 Malic enzymes signature."
FT                   /inference="protein motif:ProSite:PS00331"
FT   misc_feature    292650..293321
FT                   /note="Pfam match to entry PF03949 malic_N, Malic
FT                   enzyme,NAD binding domain, score 382.0, E-value 6.4e-112"
FT                   /inference="protein motif:Pfam:PF03949"
FT   repeat_region   complement(293342..293392)
FT                   /note="intergenic repeat 1"
FT   repeat_region   complement(293444..293527)
FT                   /note="intergenic repeat 1"
FT   CDS_pept        293557..294531
FT                   /transl_table=11
FT                   /gene="kdgT"
FT                   /locus_tag="CBO0247"
FT                   /product="2-keto-3-deoxygluconate permease"
FT                   /note="Similar to Erwinia chrysanthemi
FT                   2-keto-3-deoxygluconate permease KdgT SWALL:KDGT_ERWCH
FT                   (SWALL:P15701) (339 aa) fasta scores: E(): 2.4e-33, 38.43
FT                   id in 307 aa, and to Erwinia carotovora
FT                   2-keto-3-deoxygluconate permease KdgT SWALL:KDGT_ERWCA
FT                   (SWALL:Q9XB52) (318 aa) fasta scores: E(): 3.1e-36, 41.29
FT                   id in 310 aa"
FT                   /db_xref="GOA:A5HYE0"
FT                   /db_xref="InterPro:IPR004684"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE0"
FT                   /protein_id="CAL81799.1"
FT                   /translation="MQIPIKKTLDKIPGGMMVVPLFLGVLVNTFFPQFLQIGGFTTALF
FT                   SAKASSTILACFMFLIGSQINFKLAPKAIKKGAILIAGKFIVGAGIGIFVGKVFGPAGV
FT                   LGLSPLAILSALTNCNGGLYASLASQYGDETDVGAYALLSLKDGPFFTLVALGASGLAQ
FT                   VPIMALVAVMIPIVIGMILGNLDPDMRKFLGSSKMLLIPFFSFPLGAGMNLETIVKAGG
FT                   PGILLGIIAAFTGIGAYVLLKLFKEEPIIGLATGSTAGNAVATPAAVAAADPTLAVVAT
FT                   VATAQVAAACVISAILCPFIVSYVFGRLNKNKMKKLNNEATAG"
FT   sig_peptide     293557..293701
FT                   /gene="kdgT"
FT                   /locus_tag="CBO0247"
FT                   /note="probabilty 0.998, with cleavage site probability
FT                   0.313 between residues 49 and 50"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    293557..294486
FT                   /note="Pfam match to entry PF03812
FT                   KdgT,2-keto-3-deoxygluconate permease, score 211.8, E-value
FT                   1.1e-60"
FT                   /inference="protein motif:Pfam:PF03812"
FT   misc_feature    order(293590..293658,293701..293769,293788..293856,
FT                   294043..294111,294130..294186,294214..294282,
FT                   294301..294369,294406..294474)
FT                   /note="8 probable transmembrane helices predicted for
FT                   CBO0247 by TMHMM2.0 at aa 12-34, 49-71, 78-100,
FT                   163-185,192-210, 220-242, 249-271 and 284-306"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        294745..296367
FT                   /transl_table=11
FT                   /locus_tag="CBO0248"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 sensor protein DcuS or b4125 or z5727 or ecs5107
FT                   SWALL:DCUS_ECOLI (SWALL:P39272) (543 aa) fasta scores: E():
FT                   1.4e-44, 31.09 38d in 537 aa, and to Clostridium tetani
FT                   sensor kinase DpiB or ctc01524 SWALL:Q894L7 (EMBL:AE015941)
FT                   (538 aa) fasta scores: E(): 4.2e-67,41.17 38d in 544 aa"
FT                   /db_xref="GOA:A5HYE1"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR016120"
FT                   /db_xref="InterPro:IPR029151"
FT                   /db_xref="InterPro:IPR033463"
FT                   /db_xref="InterPro:IPR035965"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="InterPro:IPR039506"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE1"
FT                   /protein_id="CAL81800.1"
FT                   /translation="MRKAMKLQTKITLLIITVVFLSIAIIISFVVSWMTGNIENKAKTN
FT                   IMNVAEMVAHSTQIVDALEEKDPNGKIGPYINMQLKNLQQIQYIIVADNDGIRYSHPNP
FT                   KMIKKKFEGGDEYKVVKEGETYISEATGTLGKSMRAFAPIYDRENKKEIGFVSVGTLNE
FT                   NIETAKHIAILYIILIGFGGLMAGTIGAILLSNNIKNILLGLEPEEITNLYNEKMGILD
FT                   TIHEGLVAVDYMGRITLINNSALKILNLQHKVDKDEVIGKNIENIIENTGMINILQTGE
FT                   SEFEREQKINNTTIMTNRIPIMKREKIVGAIASFRDKTEVTRMAEELTGAKKMAWSLRA
FT                   QNHEFMNKLHTISGLIQLEEYDEALQFISDMAKSRNSISNILSHNIKNPSISALLLSKY
FT                   NKAEECRVSLKIDENCKLTKLPQHMTSEEIVSIIGNLIENSLDEVKNDGTGLIYIKIVE
FT                   NKNYLNIIVKDNGSGIPVEYREKIYHQGFSTKEAQRGYGMYIVKKIIDETKGTIRLDVD
FT                   NGVIWNITIPMTRGDKIDSGNDS"
FT   sig_peptide     294745..294862
FT                   /locus_tag="CBO0248"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.339 between residues 40 and 41"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(294775..294843,295255..295323)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0248 by TMHMM2.0 at aa 11-33 and 171-193"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    295132..295155
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    296014..296331
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score
FT                   77.2,E-value 3.5e-20"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        296345..297019
FT                   /transl_table=11
FT                   /locus_tag="CBO0249"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Bacillus subtilis probable
FT                   c4-dicarboxylate response regulator dctr dctr or bsu04460
FT                   SWALL:DCTR_BACSU (SWALL:P96602) (226 aa) fasta scores: E():
FT                   1e-26, 40 38d in 220 aa"
FT                   /db_xref="GOA:A5HYE2"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR013196"
FT                   /db_xref="InterPro:IPR024187"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE2"
FT                   /protein_id="CAL81801.1"
FT                   /translation="MIQVMIVEDDPMVREINSKFLKRVEGFVLYKAVSNLYDAKKFIAM
FT                   KKPDLILLDVYLPKENGIDLLKWIRKQDIDIDIILITADKSIERIQEAFRSGVVDYLIK
FT                   PFNFERFKESLIQFKGRYYEFKKNNVIEQKDLDKIICSSNISQNEDDFAKGLNKYTYKS
FT                   IWNEIEKSNDKDFTAEYLAEKLGIARVTVRRYLEYMEKENKVYKLVEYGKVGRPQHKYH
FT                   KI"
FT   misc_feature    296348..296713
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 104.5, E-value 2.1e-28"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    296870..296935
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1797.000, SD 5.31 at aa 176-197, sequence
FT                   FTAEYLAEKLGIARVTVRRYLE"
FT   misc_binding    297270..297445
FT                   /locus_tag="CBO0250"
FT                   /bound_moiety="lysine"
FT                   /note="Lysine riboswitch"
FT   CDS_pept        297576..299039
FT                   /transl_table=11
FT                   /locus_tag="CBO0250"
FT                   /product="amino-acid permease"
FT                   /note="Similar to Bacillus subtilis amino-acid permease
FT                   RocE or bsu40330 SWALL:ROCE_BACSU (SWALL:P39137) (467 aa)
FT                   fasta scores: E(): 1.8e-73, 41.99 38d in 462 aa, and to
FT                   Clostridium perfringens lysine specific permease cpe1166
FT                   SWALL:Q8XL76 (EMBL:AP003189) (489 aa) fasta scores: E():
FT                   9.5e-137, 69.37 38d in 480 aa"
FT                   /db_xref="GOA:A5HYE3"
FT                   /db_xref="InterPro:IPR002293"
FT                   /db_xref="InterPro:IPR004841"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE3"
FT                   /protein_id="CAL81802.1"
FT                   /translation="MSTTKEKDSNSHNLKRSLQARHLNMIAMGGAIGTGIFLALGATIK
FT                   QAGPGGALTAYACIGVMVYFLMTSLGEMATFMPVSGSFETYASRFIDPAFGFALGWNYW
FT                   YNWAITVAAEMVAGALIMKFWFPNVPAIIWSVLFLVLIVSLNLLSTKAYGESEYWFAGI
FT                   KVFTVIVFLLIGIATILGILGGHTVGLQNFTIKDAPFVGGVKSIFMVFLIAGFSFQGTE
FT                   LVGIAAGESENPKKTIPKAINTIFWRIIVFYLGTIFVVSAIIPYTDAGVNTSPFTLVFE
FT                   RAGIAADASLMNAVILTSVISCGNSGMYASSRMLYAMAKEGKAPSWLGKLNSRGVPVNA
FT                   LALTTLVASACFLTGLYAETTVYVWLVAASGLAGFIAWVGIALCHYRFRKAYVAQGRDL
FT                   NKLVYKAKLFPLGPIIALVLCIIVILGQGISYFEATKIDWNGIIASYIGLPIFFGLWFS
FT                   YKKKHKTKVVNLQEISFDVEDTHLKTEIV"
FT   sig_peptide     297576..297711
FT                   /locus_tag="CBO0250"
FT                   /note="probabilty 0.962, with cleavage site probability
FT                   0.544 between residues 46 and 47"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(297633..297701,297729..297797,297855..297923,
FT                   297966..298019,298056..298124,298167..298235,
FT                   298308..298376,298455..298523,298581..298649,
FT                   298659..298727,298797..298865,298893..298952)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0250 by TMHMM2.0 at aa 20-42, 52-74, 94-116,
FT                   131-148,161-183, 198-220, 245-267, 294-316, 336-358,
FT                   362-384,408-430 and 440-459"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    297639..298991
FT                   /note="Pfam match to entry PF00324 aa_permeases, Amino acid
FT                   permease, score 559.6, E-value 2.2e-165"
FT                   /inference="protein motif:Pfam:PF00324"
FT   misc_feature    298107..298139
FT                   /note="PS00435 Peroxidases proximal heme-ligand signature."
FT                   /inference="protein motif:ProSite:PS00435"
FT   CDS_pept        299583..300317
FT                   /transl_table=11
FT                   /locus_tag="CBO0251"
FT                   /product="putative metallo-beta-lactamase superfamily
FT                   protein"
FT                   /note="Similar to Serratia fonticola beta-lactamase SfhI
FT                   SWALL:Q9RMI1 (EMBL:AF197943) (234 aa) fasta scores: E():
FT                   0.086, 25.4 38d in 248 aa, and to Aeromonas veronii
FT                   metallo-B-lactamase ImiS SWALL:O31272 (EMBL:Y10415) (255
FT                   aa) fasta scores: E(): 0.45, 22.26 38d in 247 aa"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="InterPro:IPR036866"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE4"
FT                   /protein_id="CAL81803.1"
FT                   /translation="MTLTKVTDRIYFLENDKEADRALIGYIKGDKYSLMVDAGNSKNHV
FT                   EKFNNSIEKLNLRLPDYVAITHWHWDHTYGMNAVTGKTIACEITNERLKIMSKWQWTDE
FT                   AMKQRLLTGEDIEFADTNIRKEYKNLEDIKVTHADVVFKNDLEINLGGLKVILKNVVAP
FT                   HSEDSVIVYVPEERVVFIGDAYSIDFYNNYKYDLAKLQSFINMLESLEFDICFLGHSSP
FT                   LKKADIIEYLKSQYKKISISNN"
FT   misc_feature    299643..300239
FT                   /note="Pfam match to entry PF00753
FT                   lactamase_B,Metallo-beta-lactamase superfamily, score 55.8,
FT                   E-value 9.9e-14"
FT                   /inference="protein motif:Pfam:PF00753"
FT   CDS_pept        300431..300943
FT                   /transl_table=11
FT                   /locus_tag="CBO0252"
FT                   /product="putative acetyltransferase"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   acetyltransferase cac2751 SWALL:Q97FI6 (EMBL:AE007773) (167
FT                   aa) fasta scores: E(): 8.9e-07, 25.44 38d in 169 aa"
FT                   /db_xref="GOA:A5HYE5"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE5"
FT                   /protein_id="CAL81804.1"
FT                   /translation="MDKGVDMEQYIFELAQYGDIKDILSLIKLRIKWMDEKGIEQWNKT
FT                   DYLNCYPSEYFQNCIFKKELYVLKVKENKTIVGAVALHTYDSRWKDKDSSYYVHNLVTS
FT                   VNACCAGIVLINNCELVAKNNNKRYLRLDCQASNIKLNRYYERLGFGYVGIIKDGLYVG
FT                   NKREKII"
FT   misc_feature    300632..300883
FT                   /note="Pfam match to entry PF00583
FT                   Acetyltransf,Acetyltransferase (GNAT) family, score 19.4,
FT                   E-value 0.004"
FT                   /inference="protein motif:Pfam:PF00583"
FT   CDS_pept        300969..301346
FT                   /transl_table=11
FT                   /locus_tag="CBO0253"
FT                   /product="cytidine deaminase"
FT                   /EC_number="3.5.4.5"
FT                   /note="Similar to Bacillus caldolyticus cytidine deaminase
FT                   Cdd SWALL:Q9R2S1 (EMBL:AJ237979) (132 aa) fasta scores:
FT                   E(): 1.2e-05, 30.4 38d in 125 aa, and to Aspergillus
FT                   terreus blasticidin-S deaminase Bsd SWALL:BSD_ASPTE
FT                   (SWALL:P78986) (130 aa) fasta scores: E(): 3.9e-05, 31.49
FT                   id in 127 aa"
FT                   /db_xref="GOA:A5HYE6"
FT                   /db_xref="InterPro:IPR002125"
FT                   /db_xref="InterPro:IPR016192"
FT                   /db_xref="InterPro:IPR016193"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE6"
FT                   /protein_id="CAL81805.1"
FT                   /translation="MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCI
FT                   DTPCSMGFCAEHAAIAAMITAGENRITKVVAVYEDGTIIPPCGRCREFICQIHDENYKC
FT                   QVMIKKDMIITINDLLPYRWE"
FT   misc_feature    300978..301295
FT                   /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine
FT                   and deoxycytidylate deaminase zinc-binding region, score
FT                   -0.4, E-value 0.0034"
FT                   /inference="protein motif:Pfam:PF00383"
FT   misc_feature    301128..301250
FT                   /note="PS00903 Cytidine and deoxycytidylate deaminases
FT                   zinc-binding region signature."
FT                   /inference="protein motif:ProSite:PS00903"
FT   CDS_pept        301505..302407
FT                   /transl_table=11
FT                   /locus_tag="CBO0254"
FT                   /product="putative acetyltransferase"
FT                   /note="Similar to Listeria innocua hypothetical protein
FT                   Lin2361 SWALL:Q929B6 (EMBL:AL596172) (291 aa) fasta scores:
FT                   E(): 3.5e-39, 37.75 38d in 294 aa, and to Bacillus
FT                   halodurans hypothetical protein Bh3929 bh3929 SWALL:Q9K606
FT                   (EMBL:AP001520) (286 aa) fasta scores: E(): 1.7e-23,30.47
FT                   38d in 292 aa"
FT                   /db_xref="GOA:A5HYE7"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE7"
FT                   /protein_id="CAL81806.1"
FT                   /translation="MSEFLLINDKKYSYACNYRDDSILRNSFNTLTEKTYGFNFKQWYE
FT                   DGYWGDKYIPYSLLDGDNVVSNVSVNIIDFLILGEEKRYVQIGTVMTDEEYRGQGLCRA
FT                   LMERVIKEWEDKCDLIYLFANDSVLDFYPKFGFDKCDEYQYAINKIKKKKPGKIRKMSM
FT                   DNERDREFVYNMACNTISLSKLSMKNNASLIMFYCTSFMKDNIYYLEDYDTVAICDFDE
FT                   DILYVQDVFAKKEVNLDNIINVMMKYETKKVILGFTPNNSSSNEKILINEDDTTLFIKM
FT                   GKDSPFKTRDLMFPVLSHA"
FT   misc_feature    301670..301918
FT                   /note="Pfam match to entry PF00583
FT                   Acetyltransf,Acetyltransferase (GNAT) family, score 37.8,
FT                   E-value 2.7e-08"
FT                   /inference="protein motif:Pfam:PF00583"
FT   CDS_pept        302433..302957
FT                   /transl_table=11
FT                   /locus_tag="CBO0255"
FT                   /product="putative reductase"
FT                   /note="Similar to Thermotoga maritima dihydrofolate
FT                   reductase FolA or DyrA or tm1641 SWALL:DYR_THEMA
FT                   (SWALL:Q60034) (169 aa) fasta scores: E(): 0.00064, 24.56
FT                   id in 171 aa, and to Bacillus cereus pyrimidine reductase
FT                   bc0650 SWALL:Q813Y8 (EMBL:AE017000) (173 aa) fasta scores:
FT                   E(): 1.8e-16, 37.19 38d in 164 aa"
FT                   /db_xref="GOA:A5HYE8"
FT                   /db_xref="InterPro:IPR002734"
FT                   /db_xref="InterPro:IPR024072"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE8"
FT                   /protein_id="CAL81807.1"
FT                   /translation="MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDK
FT                   FLNDVDTVVMGKNCYDQSFHNDFADKKVYVATSQKLQNYGNIHFINGDICKVIEEEKEK
FT                   KGKDIFLFGGGGLADNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMD
FT                   KGVVILRYSKR"
FT   misc_feature    302439..302939
FT                   /note="Pfam match to entry PF01872 RibD_C, RibD C-terminal
FT                   domain, score 46.6, E-value 5.8e-11"
FT                   /inference="protein motif:Pfam:PF01872"
FT   CDS_pept        303020..303949
FT                   /transl_table=11
FT                   /locus_tag="CBO0256"
FT                   /product="putative exonuclease"
FT                   /note="Similar to Clostridium acetobutylicum DNA polymerase
FT                   III epsilon subunit cac0738 SWALL:Q97L28 (EMBL:AE007589)
FT                   (306 aa) fasta scores: E(): 7.7e-76,68.75 38d in 304 aa"
FT                   /db_xref="GOA:A5HYE9"
FT                   /db_xref="InterPro:IPR001357"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="InterPro:IPR013520"
FT                   /db_xref="InterPro:IPR036397"
FT                   /db_xref="InterPro:IPR036420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYE9"
FT                   /protein_id="CAL81808.1"
FT                   /translation="MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMR
FT                   FMPINIGIHGIRPHMVQDELEFDKIWGKIKGYFNNNLVIAHNASFDMSVLRSTLKLYNI
FT                   KMPSFEYICTMKLSKNFYSNIDNARLNTVNNFLGYKFKHHDALADAMACSNILINISKE
FT                   LNSKDINEISKLIGVTLGYVNEDGCKPSSIKGRILKRSNRQAPRENKKIIESFNFTAFK
FT                   EEVVVFTGGLASMTRNEAMILVGKLNGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKL
FT                   KKAIDLKKKGQNIKFLNEEAFLQKCKEK"
FT   misc_feature    303026..303514
FT                   /note="Pfam match to entry PF00929 Exonuclease,Exonuclease,
FT                   score 67.3, E-value 3.5e-17"
FT                   /inference="protein motif:Pfam:PF00929"
FT   misc_feature    303671..303931
FT                   /note="Pfam match to entry PF00533 BRCT, BRCA1 C Terminus
FT                   (BRCT) domain, score 20.4, E-value 1.1e-05"
FT                   /inference="protein motif:Pfam:PF00533"
FT   CDS_pept        complement(304450..305124)
FT                   /transl_table=11
FT                   /locus_tag="CBO0257"
FT                   /product="putative isochorismatase"
FT                   /note="Similar to Thermus thermophilus orf protein
FT                   SWALL:Q9RA48 (EMBL:AB029373) (196 aa) fasta scores: E():
FT                   0.00015, 34.54 38d in 165 aa, and to Clostridium
FT                   acetobutylicum amidase related to nicotinamidase cac0779
FT                   SWALL:Q97KY7 (EMBL:AE007593) (211 aa) fasta scores: E():
FT                   1.6e-42, 59.36 38d in 219 aa"
FT                   /db_xref="GOA:A5HYF0"
FT                   /db_xref="InterPro:IPR000868"
FT                   /db_xref="InterPro:IPR036380"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF0"
FT                   /protein_id="CAL81809.1"
FT                   /translation="MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWN
FT                   TVSPPPAPELKSVAVDPKTSALLILDMEASICKSSRCIASIPNIHNLLTKARKNNMLVV
FT                   YSLTHVGNPRDIFKQLALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAANGA
FT                   VLHTGTSAAFRGYNVIIPVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYH
FT                   DN"
FT   misc_feature    complement(304471..304947)
FT                   /note="Pfam match to entry PF00857
FT                   Isochorismatase,Isochorismatase family, score 33.1, E-value
FT                   3e-10"
FT                   /inference="protein motif:Pfam:PF00857"
FT   repeat_region   complement(305206..305354)
FT                   /note="intergenic repeat 2"
FT   CDS_pept        305551..307881
FT                   /transl_table=11
FT                   /gene="xdhA1"
FT                   /locus_tag="CBO0258"
FT                   /product="xanthine dehydrogenase, molybdenum binding
FT                   subunit"
FT                   /EC_number="1.17.1.4"
FT                   /note="Similar to Escherichia coli xanthine
FT                   dehydrogenase,molybdenum binding subunit XdhA or b2866
FT                   SWALL:XDHA_ECOLI (SWALL:Q46799) (752 aa) fasta scores: E():
FT                   6e-37, 29.35 id in 780 aa, and to Bacillus halodurans
FT                   hypothetical protein Bh1977 SWALL:Q9KBF1 (EMBL:AP001513)
FT                   (1054 aa) fasta scores: E(): 1.7e-176, 59.58 38d in 767 aa"
FT                   /db_xref="GOA:A5HYF1"
FT                   /db_xref="InterPro:IPR000674"
FT                   /db_xref="InterPro:IPR008274"
FT                   /db_xref="InterPro:IPR036856"
FT                   /db_xref="InterPro:IPR037165"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF1"
FT                   /protein_id="CAL81810.1"
FT                   /translation="MYDLNIIGKNVPRKESIDKVTGAAKYTNDYEATGLLYARMVTSPY
FT                   AHAKIKAIEYENSLKTSGVRAVITGEYFPQLVGSTIVDRPPIAIDKVRYNGEPVAVVVA
FT                   DSEIEAKKAAQMIKIEYEPLPVVNSPSEAIKKDSPLVHEKLGDYEIIDEVFPEPNTNIA
FT                   NRTKIRKGDIKKGWHESEVTVEASFSFPPSDHAAMETRSVTARILPDGRVIIYSCSQAP
FT                   FAIKKLISHFFNIDPGKVIVHVPLVGGAYGGKTAVQLEFIAYLCSKAVGGRQVKLTNTR
FT                   EEDFITSPVHIGLDAKIKLGSTKAGRLTATEITYLFDGGSYSDKAVIISRAAGIDCTGP
FT                   YNIENVWCDSLCMYTNHPYAAAFRGFGHPELTFVIERSMDILADKLGMDPLELRLRNAI
FT                   LPGDTSATQILLNKSNLGNLPQCIQKLIELINWGEVDEAETEDGKVRAKGVSCFWKNSN
FT                   TSLNAGGGAVLTFNLDGSINLICAAVEIGQGIKTALAQILAEKMKMDVDQIHVTMEVNT
FT                   KTNPEHWKTAASRTTLLVGRAVLRAAEDAINQLCDIAAVVLGRSPVELEVGRGRVFLKD
FT                   NPQIGIEISKIAFGYILPNGNSIGAQVIGRGSYAFNNLTTLDPKTGKGNPGPEWTVGAA
FT                   AVEIELDKKEYTYKIIKAACVIDAGKVINAGGARGQISGGMNLGLSFASREAFLFTNKG
FT                   IVQNKQLRTYNIMRLGENPEYLVDFVETPNLDGPYGARGIGEYGVIGMPAALGNSLSCA
FT                   AEVPLNQLPLIPEFIWKVKEGGH"
FT   misc_feature    305611..305928
FT                   /note="Pfam match to entry PF01315 Ald_Xan_dh_C, Aldehyde
FT                   oxidase and xanthine dehydrogenase, a/b hammerhead
FT                   domain,score 128.1, E-value 1.7e-35"
FT                   /inference="protein motif:Pfam:PF01315"
FT   misc_feature    305932..307689
FT                   /note="Pfam match to entry PF02738 Ald_Xan_dh_C2, Aldehyde
FT                   oxidase and xanthine dehydrogenase, molybdopterin binding
FT                   domain, score 281.7, E-value 9.7e-82"
FT                   /inference="protein motif:Pfam:PF02738"
FT   misc_feature    306292..306315
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        307881..308720
FT                   /transl_table=11
FT                   /gene="xdhB2"
FT                   /locus_tag="CBO0259"
FT                   /product="xanthine dehydrogenase, FAD binding subunit"
FT                   /EC_number="1.17.1.4"
FT                   /note="Similar to Escherichia coli xanthine
FT                   dehydrogenase,FAD binding subunit XdhB or b2867
FT                   SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E():
FT                   0.00013, 22.06 id in 281 aa, and to Bacillus cereus
FT                   xanthine dehydrogenase fad-binding subunit bc3167
FT                   SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E():
FT                   6.2e-54,52.89 38d in 276 aa"
FT                   /db_xref="GOA:A5HYF2"
FT                   /db_xref="InterPro:IPR002346"
FT                   /db_xref="InterPro:IPR005107"
FT                   /db_xref="InterPro:IPR016166"
FT                   /db_xref="InterPro:IPR016169"
FT                   /db_xref="InterPro:IPR036318"
FT                   /db_xref="InterPro:IPR036683"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF2"
FT                   /protein_id="CAL81811.1"
FT                   /translation="MIAFNFEYYKPDSLDEAVKMYKELSKSGKEPLYYSGGTEIITMAR
FT                   RNDLVTKAVIDTKGIPECNVFEIKGNQLIIGAAVTLNHIAENKLIPFLSETADFPADHT
FT                   SRNKITVGGNICGKIIYKEAVLGHLIGDSSVSIYGKKGKRILPIIQAFNQKLQLKKGEF
FT                   LFQLSTEISYSNLPYISVKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEM
FT                   EKYINNKTLTKEQRIEQAISHLPAPILGNIQGSSEYKRFVLRNLLEYTLEILDGERR"
FT   CDS_pept        308717..309190
FT                   /transl_table=11
FT                   /gene="xdhC1"
FT                   /locus_tag="CBO0260"
FT                   /product="xanthine dehydrogenase iron-sulfur binding
FT                   subunit"
FT                   /note="Similar to Escherichia coli xanthine dehydrogenase
FT                   iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI
FT                   (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61
FT                   id in 154 aa, and to Clostridium tetani carbon monoxide
FT                   dehydrogenase, small subunit ctc02474 SWALL:Q891A6
FT                   (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5
FT                   id in 152 aa"
FT                   /db_xref="GOA:A5HYF3"
FT                   /db_xref="InterPro:IPR001041"
FT                   /db_xref="InterPro:IPR002888"
FT                   /db_xref="InterPro:IPR006058"
FT                   /db_xref="InterPro:IPR012675"
FT                   /db_xref="InterPro:IPR036010"
FT                   /db_xref="InterPro:IPR036884"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF3"
FT                   /protein_id="CAL81812.1"
FT                   /translation="MISYIEETKIELDINGEKRSVIVRPADTLLRVLREKLGLTGGKPG
FT                   CENGDCGACTVLLDGIPIKSCIILAVEAVGHKLITIEGLKEEPIQKAFIEKMGFQCGYC
FT                   TPGFIMNCYGLIKNNPYADDETIEKWLQSNICRCTGYEEIRDAVKSVLFSNKK"
FT   misc_feature    308777..308932
FT                   /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur
FT                   cluster binding domain, score 9.6, E-value 0.033"
FT                   /inference="protein motif:Pfam:PF00111"
FT   misc_feature    308852..308878
FT                   /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00197"
FT   misc_feature    308954..309166
FT                   /note="Pfam match to entry PF01799 fer2_2, [2Fe-2S] binding
FT                   domain, score 120.1, E-value 4.3e-33"
FT                   /inference="protein motif:Pfam:PF01799"
FT   CDS_pept        309547..310017
FT                   /transl_table=11
FT                   /locus_tag="CBO0261"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1837 SWALL:Q8XJC3 (EMBL:AP003192) (146 aa) fasta
FT                   scores: E(): 1.4, 29.66 38d in 118 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF4"
FT                   /protein_id="CAL81813.1"
FT                   /translation="MRVKILIILGASILILTAVGFYIFNNESKALSDNKAENIKKFDEV
FT                   YSSEINKSYDGTYLDKIVTMVDAKEEFNIKINDINKGSKIILINSSNGEKQDMTYTENN
FT                   EFVLTTKLDEGVNYGILMDNKLIGGIRVVDELDKADKEKIYEEVMESLQCGI"
FT   sig_peptide     309547..309640
FT                   /locus_tag="CBO0261"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.524 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        310028..310711
FT                   /transl_table=11
FT                   /gene="ccdA1"
FT                   /locus_tag="CBO0262"
FT                   /product="cytochrome C biogenesis protein"
FT                   /note="Similar to Paracoccus pantotrophus cytochrome C
FT                   biogenesis protein CcdA SWALL:Q9EYZ1 (EMBL:AF308446) (247
FT                   aa) fasta scores: E(): 3.3e-25, 37.44 38d in 211 aa, and to
FT                   Bacillus subtilis cytochrome C-type biogenesis protein CcdA
FT                   or bsu17930 SWALL:CCDA_BACSU (SWALL:P45706) (235 aa) fasta
FT                   scores: E(): 1.8e-21, 32.03 38d in 231 aa"
FT                   /db_xref="GOA:A5HYF5"
FT                   /db_xref="InterPro:IPR003834"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF5"
FT                   /protein_id="CAL81814.1"
FT                   /translation="MNYILLFLEGIITFISPCILPMIPIYVSYFAGEDIDNKNYKNRAL
FT                   ISSIAFVAGFTFVFTLLGVAAGTVGVIFNKYMREINIVSGSIMVVFGLNYLGIINVGLL
FT                   HRSFKINKSAGHKKSSIMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASML
FT                   MIYSLGLGIPFILSALLIDSLKTTFDFIKRNYKTINRISGGLLIAIGIMMMTGYLNLLL
FT                   SILTF"
FT   misc_feature    310043..310672
FT                   /note="Pfam match to entry PF02683 DsbD, Cytochrome C
FT                   biogenesis protein transmembrane region, score
FT                   200.0,E-value 3.7e-57"
FT                   /inference="protein motif:Pfam:PF02683"
FT   misc_feature    order(310055..310123,310160..310228,310271..310339,
FT                   310400..310468,310511..310570,310631..310699)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0262 by TMHMM2.0 at aa 10-32, 45-67, 82-104,
FT                   125-147,162-181 and 202-224"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    310418..310447
FT                   /note="PS00086 Cytochrome P450 cysteine heme-iron ligand
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00086"
FT   CDS_pept        310733..311299
FT                   /transl_table=11
FT                   /gene="resA"
FT                   /locus_tag="CBO0263"
FT                   /product="thiol-disulfide oxidoreductase"
FT                   /note="Similar to Bacillus subtilis thiol-disulfide
FT                   oxidoreductase ResA or bsu23150 SWALL:RESA_BACSU
FT                   (SWALL:P35160) (179 aa) fasta scores: E(): 2.6e-11, 29.03
FT                   id in 186 aa"
FT                   /db_xref="GOA:A5HYF6"
FT                   /db_xref="InterPro:IPR013740"
FT                   /db_xref="InterPro:IPR013766"
FT                   /db_xref="InterPro:IPR036249"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF6"
FT                   /protein_id="CAL81815.1"
FT                   /translation="MKNNKRYIYISVIMLALLVGVKFGYDYLSNNYKSNEAINNVSDEN
FT                   SSFQPAVDFTVYDKDNNEVKLSDYKGKKAIVVNFWASWCSPCKYEMPYFQEATNKYNNE
FT                   DLEILMVNLTDGMRETKGSAEGFMKEEGYDMNVMFDINLDAANKYQLNAIPRTVFIDKE
FT                   GNLVYDHVGIINKEILDENINKIIN"
FT   misc_feature    310751..310819
FT                   /note="1 probable transmembrane helix predicted for CBO0263
FT                   by TMHMM2.0 at aa 7-29"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    310889..311068
FT                   /note="Pfam match to entry PF00085 thiored,
FT                   Thioredoxin,score 17.6, E-value 0.00025"
FT                   /inference="protein motif:Pfam:PF00085"
FT   CDS_pept        311324..312001
FT                   /transl_table=11
FT                   /locus_tag="CBO0264"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Enterococcus faecium regulatory protein
FT                   VanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta scores:
FT                   E(): 7.1e-27, 41.66 38d in 228 aa, and to
FT                   Thermoanaerobacter tengcongensis response regulators
FT                   consisting of a chey-like receiver domain and a hth
FT                   DNA-binding domain ompr6 or tte2474 SWALL:Q8R7E1
FT                   (EMBL:AE013188) (231 aa) fasta scores: E(): 3.6e-39,51.32
FT                   38d in 226 aa"
FT                   /db_xref="GOA:A5HYF7"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF7"
FT                   /protein_id="CAL81816.1"
FT                   /translation="MKETILVIDDEVKIIEVIKLYLENEGYTVIQATSGIEALEKQSEF
FT                   NPDLLILDLMLPDISGENVCERIRRESEVPIIMLTAKSSEDSILNGYSIGSDDYITKPF
FT                   SPKQLVAKVNAVLKRVKGNQRENLIFNNELIIDIVNKKVEYNNKEIILTASEYKILSIL
FT                   AKNPNKIFSREELMDYISRDNTCIYDRIIDTHIKNIRAKLDQDSKNPTYIKTIRGMGYR
FT                   FNV"
FT   misc_feature    311330..311686
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 131.9, E-value 1.2e-36"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    311762..311992
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 77.3, E-value 3.4e-20"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        311994..313391
FT                   /transl_table=11
FT                   /locus_tag="CBO0265"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Clostridium perfringens two-component
FT                   sensor histidine kinase cpe2331 SWALL:Q8XHZ3
FT                   (EMBL:AP003193) (467 aa) fasta scores: E(): 1.2e-57,38.36
FT                   38d in 464 aa"
FT                   /db_xref="GOA:A5HYF8"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF8"
FT                   /protein_id="CAL81817.1"
FT                   /translation="MFNKLRYRVSLIFILFSLSIIFLANIVNHYCIEKKFNIYTSEKIQ
FT                   QSKMEIKNKISNAYSNNSWDKKAIENIGTDAITGGLLITVKDKNDNIIWNAREYDNIVC
FT                   EKILNKIIENTNKVSPDVDIKNTFDKFNLKQGEALIGKLEIEYIGPIYYEDSDVIFLRM
FT                   LDRILFILGLLFFIISIIVGWLLSYAISKPILKVIDATNLISEGNYSKGIKEDYSIYEI
FT                   NKLIKSINMMAGDLDKQEKIRQELTKDISHELRTPITTMQAQLEAIMDGLWEPSQERLK
FT                   SIYDELQRLNRLTVSIEDLSRCEGSKLRLNKSEVDLETVITTILTNFEKQLLDKDINLQ
FT                   VDLKHINIMIDRDKISQVILNIISNAIKYTPDKGEIFVRCFIKSDNVYISIKDSGIGIS
FT                   DEDKDYIFERFYRTDKSRARETGGVGIGLTISREIVKAHGGSINVYSKLDEGSNFVIKL
FT                   PIKFCGT"
FT   misc_feature    order(312015..312083,312495..312563)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0265 by TMHMM2.0 at aa 15-37 and 175-197"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    312495..312707
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   42.2, E-value 1.2e-09"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    312717..312911
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 51.9, E-value 1.5e-12"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    313041..313376
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 147.1,
FT                   E-value 3.3e-41"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        complement(313753..314847)
FT                   /transl_table=11
FT                   /locus_tag="CBO0266"
FT                   /product="putative FAD-dependent oxidoreductase"
FT                   /note="Similar to Clostridium perfringens probable
FT                   reticuline oxidase cpe0406 SWALL:Q8XND2 (EMBL:AP003186)
FT                   (448 aa) fasta scores: E(): 4.9e-57, 42.33 38d in 352 aa"
FT                   /db_xref="GOA:A5HYF9"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="InterPro:IPR016166"
FT                   /db_xref="InterPro:IPR016167"
FT                   /db_xref="InterPro:IPR016169"
FT                   /db_xref="InterPro:IPR036318"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYF9"
FT                   /protein_id="CAL81818.1"
FT                   /translation="MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKA
FT                   ILFARKNNFKIRVRCGGHNYEGFSIADDALIIDISNLNKIQINYECNTVTVGSGAFLGQ
FT                   VYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLT
FT                   ANKNINSDLYWACRGGGGGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDT
FT                   WQNWITTTSNKINMKGSIVNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYR
FT                   YTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKNLINIINEERPNGSTTTELNV
FT                   YGLGGQVSKINKKDTAFIIEIVII"
FT   misc_feature    complement(314302..314760)
FT                   /note="Pfam match to entry PF01565 FAD_binding_4, FAD
FT                   binding domain, score 152.8, E-value 6e-43"
FT                   /inference="protein motif:Pfam:PF01565"
FT   CDS_pept        315150..316475
FT                   /transl_table=11
FT                   /locus_tag="CBO0267"
FT                   /product="probable glycosyl hydrolase"
FT                   /note="Similar to Klebsiella pneumoniae
FT                   6-phospho-alpha-glucosidase aglB SWALL:AGLB_KLEPN
FT                   (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.3e-79, 47.17
FT                   id in 443 aa"
FT                   /db_xref="GOA:A5HYG0"
FT                   /db_xref="InterPro:IPR001088"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR019802"
FT                   /db_xref="InterPro:IPR022616"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG0"
FT                   /protein_id="CAL81819.1"
FT                   /translation="MKKYNVVIVGGGSTFTPGFLKSFCRCKKDFPLNKLVLFDIDAERQ
FT                   TPIGEFGQILMKENYEGLDFKYTTDIEEAYKDMDFVFMQMRVGGLHMRAKDEHIPLSMG
FT                   LIGQETCGAGGMAYGLRSTKEMIKAIYDIRKYSPNAWILNYSNPAAIVAEALRREFPND
FT                   NKILNICDQPENVVRSCSRLLGCDWETLDPVYFGLNHYGWFTHIYDKNTGEDLLPKLKE
FT                   LIKEKGFLPQDAEQRDQSWLDTYGMVQTLMNDFPDYLPNTYDQYYLYPDYKASHLDPNF
FT                   TRADEVMAHRENRVFTECRKVIDAGTTEGIIKIESDAHAEMMIEVAASIAYNKNKRYII
FT                   IVENNGAINNMQDDAMVEVVAELGINGPRPMRVGNIPQFYLGLLVNQVSCEKLLIDAYY
FT                   EKSYNKALQAFTINRLINDGKKARKVLDALIEANKGYWPELK"
FT   misc_feature    315162..316397
FT                   /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4
FT                   glycosyl hydrolase, score 358.7, E-value 6.6e-105"
FT                   /inference="protein motif:Pfam:PF02056"
FT   CDS_pept        316638..318161
FT                   /transl_table=11
FT                   /locus_tag="CBO0268"
FT                   /product="PTS system, IIabc component"
FT                   /note="Similar to Escherichia coli PTS system, maltose and
FT                   glucose-specific IIabc component MalX or b1621
FT                   SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E():
FT                   6.6e-55, 40.03 38d in 522 aa"
FT                   /db_xref="GOA:A5HYG1"
FT                   /db_xref="InterPro:IPR001996"
FT                   /db_xref="InterPro:IPR003352"
FT                   /db_xref="InterPro:IPR013013"
FT                   /db_xref="InterPro:IPR018113"
FT                   /db_xref="InterPro:IPR036878"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG1"
FT                   /protein_id="CAL81820.1"
FT                   /translation="MSKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQA
FT                   ALPFLQNSVGVYVLTLIKTITATVFGMIPVLFAICIAFGLAKEEKEIAAFAGFIGYYTF
FT                   LLSASIIINSGAFNFASLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDFPIA
FT                   IAFYGGKRFVAIVVIGAMTLLGQVMPFVWVPISSGINSLGSLIASSGHTGVFLFGFLER
FT                   ILIPTGLHHVLNGVFRTTSVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMP
FT                   FMMFGLPAAAYAIYKTSPDNKKPKVKALMVAGVAASIVSGITEPLEFSFMFIAPQLFLF
FT                   HAIMGGISFGILSLLGVAIGNTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVF
FT                   KWYFTNKNISIDVNEDVEEEDFSKDSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVD
FT                   IKDMSLVNEDLLKKTGSMGIVKPSSTHIHVIYGPKVEKVAKQVKEAMKY"
FT   sig_peptide     316638..316770
FT                   /locus_tag="CBO0268"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.923 between residues 45 and 46"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    316680..317675
FT                   /note="Pfam match to entry PF02378
FT                   PTS_EIIC,Phosphotransferase system, EIIC, score 195.9,
FT                   E-value 6.5e-56"
FT                   /inference="protein motif:Pfam:PF02378"
FT   misc_feature    order(316686..316754,316797..316892,316911..316979,
FT                   317037..317090,317151..317219,317229..317297,
FT                   317448..317516,317559..317627,317646..317714,
FT                   317778..317846)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0268 by TMHMM2.0 at aa 17-39, 54-85, 92-114,
FT                   134-151,172-194, 198-220, 271-293, 308-330, 337-359 and
FT                   381-403"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    317931..318035
FT                   /note="Pfam match to entry PF00367
FT                   PTS_EIIB,phosphotransferase system, EIIB, score 56.9,
FT                   E-value 4.5e-14"
FT                   /inference="protein motif:Pfam:PF00367"
FT   CDS_pept        complement(318212..318979)
FT                   /transl_table=11
FT                   /locus_tag="CBO0269"
FT                   /product="transcriptional regulator of phosphosugar
FT                   synthesis"
FT                   /note="Similar to Escherichia coli, and Escherichia coli O6
FT                   HTH-type transcriptional regulator RpiR or alsr or b4089 or
FT                   c5095 SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta
FT                   scores: E(): 1.4e-06, 21.23 38d in 226 aa, and to
FT                   Enterococcus faecalis ef0065 or ef0539 SWALL:Q8KU94
FT                   (EMBL:AF454824) (272 aa) fasta scores: E(): 3.6e-14,29.09
FT                   38d in 244 aa"
FT                   /db_xref="GOA:A5HYG2"
FT                   /db_xref="InterPro:IPR000281"
FT                   /db_xref="InterPro:IPR001347"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR035472"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG2"
FT                   /protein_id="CAL81821.1"
FT                   /translation="MIDDLDEKILKKLTPNEKDLLNYINSNKFEIYKMSIHEFAQITYV
FT                   STATVLRLCKKLGFNGFNELKFNLKKSITLKNKGYDSSIGLNGLLSRRLLELKETMLSL
FT                   NLEQLDSIVDYLCSDKNIHIFGRGLTQMSLEYLYNILISLNRQCMFYLDPPLVYQTASQ
FT                   MDENDVFIIGSFGGSTDPIVKAVEISKNNTGTVIAITSNPNSELAKKADIVLIGKTQNR
FT                   FFSGIDINSRLSIQFIVEIIIELYMSRMNIVSH"
FT   misc_feature    complement(318236..318643)
FT                   /note="Pfam match to entry PF01380 SIS, SIS domain, score
FT                   6.2, E-value 0.012"
FT                   /inference="protein motif:Pfam:PF01380"
FT   misc_feature    complement(318668..318973)
FT                   /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix
FT                   domain, rpiR family, score 37.0, E-value 4.4e-08"
FT                   /inference="protein motif:Pfam:PF01418"
FT   misc_feature    complement(318815..318880)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1429.000, SD 4.05 at aa 34-55, sequence
FT                   MSIHEFAQITYVSTATVLRLCK"
FT   CDS_pept        complement(318995..319774)
FT                   /transl_table=11
FT                   /locus_tag="CBO0270"
FT                   /product="RpiR-family transcriptional regulator"
FT                   /note="Similar to Bacillus subtilis hth-type
FT                   transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU
FT                   (SWALL:P54717) (254 aa) fasta scores: E(): 1.6e-08, 23.55
FT                   38d in 259 aa"
FT                   /db_xref="GOA:A5HYG3"
FT                   /db_xref="InterPro:IPR000281"
FT                   /db_xref="InterPro:IPR001347"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR035472"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG3"
FT                   /protein_id="CAL81822.1"
FT                   /translation="MLDCIDNSILNTLTQSELSVLQYIDVHSNEVLTMSIQELSEKVFF
FT                   STATILRLCKKLNLSGFSELKFTLKNNVSFNNSLKSTAVSTKKIVTDLYSEIENTGRLL
FT                   DTKTLDTIVGYLLSNKKIHLFSYGLTNMAFEYMQRYLLATGRQTILYKTDTLAYKAVNN
FT                   LTENDVLFLSSSTGSNPSTLKLAKIAKNSNTIIVAITPFTNNPLSKIADINLYTFIKER
FT                   DFFDSDIKNRTCIFYIVDMIIECYIKYLDKSKFNNLY"
FT   misc_feature    complement(319439..319774)
FT                   /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix
FT                   domain, rpiR family, score 28.5, E-value 2.2e-06"
FT                   /inference="protein motif:Pfam:PF01418"
FT   misc_feature    complement(319610..319675)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1349.000, SD 3.78 at aa 34-55, sequence
FT                   MSIQELSEKVFFSTATILRLCK"
FT   CDS_pept        320050..320532
FT                   /transl_table=11
FT                   /locus_tag="CBO0271"
FT                   /product="PTS system, glucose-specific IIa component"
FT                   /EC_number="2.7.1.69"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi PTS system, glucose-specific IIa component Crr or
FT                   stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908)
FT                   (168 aa) fasta scores: E(): 1.4e-13, 40.58 id in 138 aa"
FT                   /db_xref="GOA:A5HYG4"
FT                   /db_xref="InterPro:IPR001127"
FT                   /db_xref="InterPro:IPR011055"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG4"
FT                   /protein_id="CAL81823.1"
FT                   /translation="MFSLFKKKEKNLKLKAYLSGKMISINKVPDEVFSSKIMGDGLAII
FT                   PTTSIVKSPADGEITVVMEESKHAVGIKFENGVEALIHVGIDTVSMNGEGFEVFVKTGD
FT                   SVKEGQDLIMFDEELIKNRGLSTYTMLVITNSSEYPNMVIEAEKEVKEKESVIITF"
FT   misc_feature    320137..320454
FT                   /note="Pfam match to entry PF00358
FT                   PTS_EIIA_1,phosphoenolpyruvate-dependent sugar
FT                   phosphotransferase system, EIIA 1, score 169.1, E-value
FT                   7.9e-48"
FT                   /inference="protein motif:Pfam:PF00358"
FT   misc_feature    320278..320316
FT                   /note="PS00371 PTS EIIA domains phosphorylation site
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00371"
FT   misc_feature    320666..320725
FT                   /note="1 probable transmembrane helix predicted for CBO0272
FT                   by TMHMM2.0 at aa 13-32"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        320699..321406
FT                   /transl_table=11
FT                   /locus_tag="CBO0272"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Clostridium tetani two-component response
FT                   regulator ctc00392 SWALL:Q898Q1 (EMBL:AE015937) (231 aa)
FT                   fasta scores: E(): 1.4e-78, 90.47 38d in 231 aa"
FT                   /db_xref="GOA:A5HYG5"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG5"
FT                   /protein_id="CAL81824.1"
FT                   /translation="MIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDFSNIKDEVL
FT                   ECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITK
FT                   PFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKIDDLILYTNKSMLEFKGRKTELSKNEFS
FT                   LLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRG
FT                   QGYMLINKWESKE"
FT   misc_feature    320711..321067
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 77.2, E-value 3.6e-20"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    321152..321379
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 84.0, E-value 3.2e-22"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        321407..322465
FT                   /transl_table=11
FT                   /locus_tag="CBO0273"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Clostridium tetani two-component sensor
FT                   histidine kinase ctc00393 SWALL:Q898Q0 (EMBL:AE015937) (352
FT                   aa) fasta scores: E(): 9.2e-107, 85.22 38d in 352 aa"
FT                   /db_xref="GOA:A5HYG6"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG6"
FT                   /protein_id="CAL81825.1"
FT                   /translation="MKKMKFIDFLKDRIAYIIVYFISISLVILIMHLTLFIKVIDFPIT
FT                   NILYAYFVSIVILIIFLLYEYSKLRVFYKQIYRALNSEDIIEDIVNIGEARTREQKLFT
FT                   ELLKKIHKSYEGKIYKYEDIQKHYSNFINQWVHQMKTPVSVINLILEEENPCECKEVFD
FT                   SIGEENEKISQGLNIMLYNARINEFNHDFNVEDVDILFILRKVINDNKKLLIRHKIFPK
FT                   IAGETTIVQTDKKWIYFVINQIVINAIKYTVATEKDKKTINLKIEEDTGKIIVSIEDNG
FT                   IGIPKEDLGRVFNAFFTGKNGRKTSESTGMGMYLSKRICSELGNELYVESEEGEGTTFY
FT                   IVFYKGKNIFKL"
FT   misc_feature    order(321449..321517,321530..321598)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0273 by TMHMM2.0 at aa 15-37 and 42-64"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    321785..321970
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 13.6, E-value 0.0043"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    322100..322444
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 119.5,
FT                   E-value 6.7e-33"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        322585..323355
FT                   /transl_table=11
FT                   /locus_tag="CBO0274"
FT                   /product="ABC transporter ATP-binding protein"
FT                   /note="Similar to Clostridium tetani ABC transporter
FT                   ATP-binding protein ctc00394 SWALL:Q898P9 (EMBL:AE015937)
FT                   (256 aa) fasta scores: E(): 1.2e-81, 95.31 38d in 256 aa"
FT                   /db_xref="GOA:A5HYG7"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG7"
FT                   /protein_id="CAL81826.1"
FT                   /translation="MSILKVENITKIYGGKKGGMKFKALDKFSLEIEKGEFVGVMGPSG
FT                   SGKTTLLNIMATIDTPTSGELFINGTNPIKLNEKNIALFRRKELGFIFQDFNLLDSLSI
FT                   KENIILPLVLEKIKVREIEKKVEDIANLLNIKDILNKKPYEISGGQQQRAACARALIHN
FT                   PSIILADEPTGNLDSKASQDVMETLTNLNDKKEATIMMVTHDPFSASFCKRIIMIKDGK
FT                   YFLEIVNGGNRQAFFKEIMDSLSLLGSRSNNYTL"
FT   misc_feature    322687..323247
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 196.2, E-value 5.4e-56"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    322708..322731
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        323369..325339
FT                   /transl_table=11
FT                   /locus_tag="CBO0275"
FT                   /product="ABC transporter permease protein"
FT                   /note="Similar to Clostridium tetani ABC transporter
FT                   permease protein ctc00396 SWALL:Q898P8 (EMBL:AE015937) (655
FT                   aa) fasta scores: E(): 5.2e-203, 90.24 38d in 656 aa"
FT                   /db_xref="GOA:A5HYG8"
FT                   /db_xref="InterPro:IPR003838"
FT                   /db_xref="InterPro:IPR027022"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG8"
FT                   /protein_id="CAL81827.1"
FT                   /translation="MTINNIVIKNIKGNLNKYAMYYLSNVIVVTIFFIFANFIYNPGVS
FT                   SGNISDKTISEVASKLMYLCEFVIIIFTFIFSNYSITTFLKSREKEFGLLSMFGLTKNQ
FT                   IRRYVMFENITISIVSIITGIFFGILFSKLFFMALSVILDLNAEIPFLISSKAVKITIL
FT                   SFLVVLNLISFITSFKIKNNNIAELLKGERIPKTTPKFSKIKAILGIVLIISGYIVGIF
FT                   SGTAIISTMIPILIVVIIGTKLLFSQFSVFFTNKLQNNKRIYYKGINLITLSQIIYKLK
FT                   DNAKVLFITSILSGITLASAISVYSLQKVSLSSMEENCPQDIGIIEQGINSHKVIANGK
FT                   VEDILKKCKFDIQYKNKIELIKAKNSDMVKENKKNPYNIKINKNDFNIMSENSFNELAK
FT                   QYNKKPLDLKNGEVVIYTYDFTNNLANLKTELPFNHQKTLNLNIEGKASSFNILDNLKG
FT                   GIINADSQNTNTLIVNNSDFKKLWSRVSNSNKYVYYGYNIKHNLKAVAAVTEIKNAVTK
FT                   GQEAFFTERVISAASVMQLLSVLLFIGTFIAMIFFIATGSILYFKMFNEVQKDKQDFIG
FT                   LKKIGVTQEEIKKIVSIQSFTMFFLPLTVAILHAAFAVKSVGLLYTKYFIFIAGIYLVL
FT                   QIIYYLFAKWMYMKQINSWNI"
FT   misc_feature    order(323429..323488,323546..323614,323693..323761,
FT                   323819..323887,323984..324052,324062..324130,
FT                   324224..324283,324983..325051,325142..325210,
FT                   325238..325297)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0275 by TMHMM2.0 at aa 21-40, 60-82, 109-131,
FT                   151-173,206-228, 232-254, 286-305, 539-561, 592-614 and
FT                   624-643"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    323531..323923
FT                   /note="Pfam match to entry PF02687 FtsX, Predicted
FT                   permease, score 32.3, E-value 1.2e-06"
FT                   /inference="protein motif:Pfam:PF02687"
FT   CDS_pept        325579..326793
FT                   /transl_table=11
FT                   /locus_tag="CBO0276"
FT                   /product="alanine racemase"
FT                   /EC_number="5.1.1.1"
FT                   /note="Similar to Treponema pallidum alanine racemase Alr
FT                   or tp0681 SWALL:ALR_TREPA (SWALL:Q56346) (377 aa) fasta
FT                   scores: E(): 9.7e-37, 35.93 38d in 384 aa, and to
FT                   Clostridium acetobutylicum alanine racemase 1 Alr1 or
FT                   cac0492 SWALL:ALR1_CLOAB (SWALL:Q97LR2) (386 aa) fasta
FT                   scores: E(): 8e-87, 58.98 38d in 395 aa"
FT                   /db_xref="GOA:A5HYG9"
FT                   /db_xref="InterPro:IPR000821"
FT                   /db_xref="InterPro:IPR001608"
FT                   /db_xref="InterPro:IPR009006"
FT                   /db_xref="InterPro:IPR011079"
FT                   /db_xref="InterPro:IPR020622"
FT                   /db_xref="InterPro:IPR029066"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYG9"
FT                   /protein_id="CAL81828.1"
FT                   /translation="MFEHSRPAWIEINLDNLIHNMKEIRRVARSKEIISVVKADAYGHG
FT                   ALEIASLLLENGANRLAVAVLSEALELRNSGITAPIIILGYTPLRYDERTICNNAETII
FT                   KNDLEVSVSSYKYAEQLSKKAQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKL
FT                   PNIIFEGLFSHFSTADEKNKEYTNEQFKKFLDFYYKLRDKNVKVNIKHIANSAALIDLP
FT                   YTHLDAVRPGIAQYGYYPSSEVNHKDINLRPIMTLKTNIVLVKDIKSGQSISYGRKFRT
FT                   IRNSKIAVLPIGYADGYERELSNENNVYKAQVIVNGRRAPIVGRITMDMCMIDVTDIGD
FT                   VKVGDEVILIGECNDERISVEDIANLLNTIPYEVTSRISKRIPRYYIKDGKIVKISQIN
FT                   KEVNK"
FT   misc_feature    325597..326301
FT                   /note="Pfam match to entry PF01168 Ala_racemase_N, Alanine
FT                   racemase, N-terminal domain, score 291.9, E-value 8.3e-85"
FT                   /inference="protein motif:Pfam:PF01168"
FT   misc_feature    325681..325713
FT                   /note="PS00395 Alanine racemase pyridoxal-phosphate
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00395"
FT   misc_feature    325729..325755
FT                   /note="PS00572 Glycosyl hydrolases family 1 active site."
FT                   /inference="protein motif:ProSite:PS00572"
FT   misc_feature    326338..326739
FT                   /note="Pfam match to entry PF00842 Ala_racemase_C, Alanine
FT                   racemase, C-terminal domain, score 227.4, E-value 2.3e-65"
FT                   /inference="protein motif:Pfam:PF00842"
FT   CDS_pept        327313..328884
FT                   /transl_table=11
FT                   /locus_tag="CBO0277"
FT                   /product="PTS system, IIbc component"
FT                   /note="Similar to Bacillus subtilis PTS system,arbutin-like
FT                   IIbc component GlvC or GlvCB or Glv-2 or bsu08200
FT                   SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E():
FT                   8.6e-61, 36.41 38d in 530 aa, and to Klebsiella pneumoniae
FT                   PTS system, alpha-glucoside-specific IIbc component AglA
FT                   SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E():
FT                   3.3e-59, 35.53 38d in 529 aa"
FT                   /note="Also highly similar to CBO0288 (53.2 38d)"
FT                   /db_xref="GOA:A5HYH0"
FT                   /db_xref="InterPro:IPR001996"
FT                   /db_xref="InterPro:IPR003352"
FT                   /db_xref="InterPro:IPR013013"
FT                   /db_xref="InterPro:IPR018113"
FT                   /db_xref="InterPro:IPR036878"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH0"
FT                   /protein_id="CAL81829.1"
FT                   /translation="MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGES
FT                   GLLMNIGKFISSGLWPIMTNLSIIFCVGIAMGLAKEKKAEAALVAVFSYLVYLGANNQW
FT                   LTLTGKLVKYKVPADLYGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEFPGA
FT                   FGLYGNTKLVFIVLTPITLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNR
FT                   FLIPTGLHHLIWTPFSYSNIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQY
FT                   GMVKMFGLAGAALAFYKTSKPENKVKLKSILIPAVATSILVGITEPLEFTFLFVAPFLW
FT                   VVHSVLDGIFEAVVSLLGVRTFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYF
FT                   FVFKFLIKKFNLKTPGREDKEVKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGG
FT                   KENIESVDNCFTRLRLKLKNIDVVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIV
FT                   DKYLGN"
FT   sig_peptide     327313..327421
FT                   /locus_tag="CBO0277"
FT                   /note="probabilty 0.749, with cleavage site probability
FT                   0.262 between residues 37 and 38"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    327349..328356
FT                   /note="Pfam match to entry PF02378
FT                   PTS_EIIC,Phosphotransferase system, EIIC, score 205.0,
FT                   E-value 1.2e-58"
FT                   /inference="protein motif:Pfam:PF02378"
FT   misc_feature    order(327370..327438,327481..327549,327568..327627,
FT                   327697..327765,327826..327894,327904..327972,
FT                   328144..328212,328270..328338,328357..328425,
FT                   328462..328530)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0277 by TMHMM2.0 at aa 20-42, 57-79, 86-105,
FT                   129-151,172-194, 198-220, 278-300, 320-342, 349-371 and
FT                   384-406"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    328657..328761
FT                   /note="Pfam match to entry PF00367
FT                   PTS_EIIB,phosphotransferase system, EIIB, score 52.9,
FT                   E-value 7.6e-13"
FT                   /inference="protein motif:Pfam:PF00367"
FT   CDS_pept        329200..330525
FT                   /transl_table=11
FT                   /gene="glvA1"
FT                   /gene_synonym="glvG1"
FT                   /locus_tag="CBO0278"
FT                   /product="maltose-6'-phosphate glucosidase"
FT                   /EC_number="3.2.1.122"
FT                   /note="Similar to Bacillus subtilis maltose-6'-phosphate
FT                   glucosidase GlvA or GlvG or Glv-1 or bsu08180
FT                   SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E():
FT                   3.5e-140, 77.44 38d in 439 aa"
FT                   /note="Also similar to CBO0289 (73.69 38d) and CBO0267
FT                   (48.19 38d)"
FT                   /note="Also highly similar to CBO0289 (73.69 38d)"
FT                   /db_xref="GOA:A5HYH1"
FT                   /db_xref="InterPro:IPR001088"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR019802"
FT                   /db_xref="InterPro:IPR022616"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH1"
FT                   /protein_id="CAL81830.1"
FT                   /translation="MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQ
FT                   EIVAGACKVILKEKAPEIEFLATVDPEEAFTDIDFVMAHIRVGKYAMRELDEKIPLKYD
FT                   VLGQETCGPGGMAYGMRSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNS
FT                   KILNICDMPIGIEVRMAEILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEH
FT                   VSKHGYVVDKGDSQHTEASWNDTFAKAKDVYAVDPNTLPNTYLKYYLFQDYVVKHANKE
FT                   YTRANEVMDGREKFVFGECKKVIEKQSTEGCELHIDEHACYIVDLARAIAYNTKERMLL
FT                   IVENNGIIENFDSTAMVEVPCILGSNGPEPLAIGKIPQFQKGLMEQQVSVEKLVVEAWI
FT                   EKSYQKLWQAITLSKTVPSASVAKNILDDLIEANKDYWPELK"
FT   misc_feature    329212..330447
FT                   /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4
FT                   glycosyl hydrolase, score 751.2, E-value 4.6e-223"
FT                   /inference="protein motif:Pfam:PF02056"
FT   misc_feature    329611..329706
FT                   /note="PS01324 Glycosyl hydrolases family 4 signature."
FT                   /inference="protein motif:ProSite:PS01324"
FT   CDS_pept        330839..331348
FT                   /transl_table=11
FT                   /gene="ptsG"
FT                   /gene_synonym="ptsX"
FT                   /gene_synonym="crr"
FT                   /locus_tag="CBO0279"
FT                   /product="PTS system, IIa component"
FT                   /EC_number="2.7.1.69"
FT                   /note="Similar to Bacillus subtilis PTS
FT                   system,glucose-specific IIabc component PtsG or PtsX or Crr
FT                   or bsu13890 SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta
FT                   scores: E(): 3.7e-24, 52.56 38d in 156 aa, and to
FT                   Escherichia coli, Escherichia coli O6, and Shigella
FT                   flexneri PTS system, glucose-specific IIa component Crr or
FT                   Gsr or Iex or Tgs or TreD or b2417 or c2952 or sf2472 or
FT                   s2618 SWALL:PTGA_ECOLI (SWALL:P08837) (168 aa) fasta
FT                   scores: E(): 2.1e-22, 42.35 38d in 170 aa"
FT                   /db_xref="GOA:A5HYH2"
FT                   /db_xref="InterPro:IPR001127"
FT                   /db_xref="InterPro:IPR011055"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH2"
FT                   /protein_id="CAL81831.1"
FT                   /translation="MFKKIKSLLSNDKSDVQQENLNEVFVSPISGEIISLDDVPDEVFS
FT                   QRMMGDGFAIQPENGDVFSPVDGTITAVFPTKHAISIKSESGVEILIHFGLDTVNLNGE
FT                   GFQVYVEEGNQVKAGDMLLKVNIEEIKDKVPSLIVPIIFMDLNGKNFSYNTGKVTAKEP
FT                   NIITLK"
FT   misc_feature    330959..331273
FT                   /note="Pfam match to entry PF00358
FT                   PTS_EIIA_1,phosphoenolpyruvate-dependent sugar
FT                   phosphotransferase system, EIIA 1, score 206.5, E-value
FT                   4.2e-59"
FT                   /inference="protein motif:Pfam:PF00358"
FT   misc_feature    331097..331135
FT                   /note="PS00371 PTS EIIA domains phosphorylation site
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00371"
FT   CDS_pept        331631..332392
FT                   /transl_table=11
FT                   /locus_tag="CBO0280"
FT                   /product="transcriptional regulator of phosphosugar
FT                   synthesis"
FT                   /note="Similar to Bacillus subtilis hth-type
FT                   transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU
FT                   (SWALL:P54717) (254 aa) fasta scores: E(): 3.9e-06, 26.17
FT                   38d in 256 aa"
FT                   /db_xref="GOA:A5HYH3"
FT                   /db_xref="InterPro:IPR000281"
FT                   /db_xref="InterPro:IPR001347"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR035472"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH3"
FT                   /protein_id="CAL81832.1"
FT                   /translation="MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHY
FT                   TSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNYFNSEKNNKYYGVELEELLALIEDK
FT                   DISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKA
FT                   KLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDR
FT                   NKLSNSFYPNALMLFEFLIGKYLERIKDDSV"
FT   misc_feature    331961..332365
FT                   /note="Pfam match to entry PF01380 SIS, SIS domain, score
FT                   17.2, E-value 0.0022"
FT                   /inference="protein motif:Pfam:PF01380"
FT   CDS_pept        complement(332429..332611)
FT                   /transl_table=11
FT                   /locus_tag="CBO0281"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to the C-terminal region of Clostridium
FT                   acetobutylicum hypothetical protein Cac0806 SWALL:Q97KW0
FT                   (EMBL:AE007596) (209 aa) fasta scores: E(): 2.3e-07,51.56
FT                   38d in 64 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH4"
FT                   /protein_id="CAL81833.1"
FT                   /translation="MTLKSTYNYVIKAYGTGKVDHMKQVGCVNDLDKYRQEFHIEFHKN
FT                   TKLIYSIRLENIPIK"
FT   CDS_pept        332880..333077
FT                   /transl_table=11
FT                   /gene="cspA"
FT                   /locus_tag="CBO0282"
FT                   /product="cold shock protein"
FT                   /note="Similar to Lactobacillus plantarum cold shock
FT                   protein 2 CspL or Lp_0031 SWALL:CSP2_LACPL (SWALL:P96349)
FT                   (66 aa) fasta scores: E(): 3.8e-15, 68.85 38d in 61 aa"
FT                   /note="Also similar to CBO1387 (63.9 38d.) and CBO1772 (49.
FT                   38d.)."
FT                   /db_xref="GOA:A5HYH5"
FT                   /db_xref="InterPro:IPR002059"
FT                   /db_xref="InterPro:IPR011129"
FT                   /db_xref="InterPro:IPR012156"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="InterPro:IPR019844"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH5"
FT                   /protein_id="CAL81834.1"
FT                   /translation="MNGTVKWFNGEKGFGFITGEDGNDVFAHFSQINSEGYKSLEEGQK
FT                   VSYDVVKGPKGPQAENITII"
FT   misc_feature    332880..333074
FT                   /note="Pfam match to entry PF00313 CSD, 'Cold-shock'
FT                   DNA-binding domain, score 137.6, E-value 2.4e-38"
FT                   /inference="protein motif:Pfam:PF00313"
FT   misc_feature    332919..332975
FT                   /note="PS00352 'Cold-shock' DNA-binding domain signature."
FT                   /inference="protein motif:ProSite:PS00352"
FT   CDS_pept        333419..333973
FT                   /transl_table=11
FT                   /locus_tag="CBO0283"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Enterococcus faecalis hypothetical
FT                   protein ef0747 SWALL:Q837T3 (EMBL:AE016949) (236 aa) fasta
FT                   scores: E(): 4.1e-24, 45.81 38d in 179 aa, and to
FT                   Agrobacterium tumefaciens hypothetical protein atu1659
FT                   atu1659 or agr_c_3054 SWALL:Q8UEU5 (EMBL:AE009122) (217 aa)
FT                   fasta scores: E(): 1.1e-21, 55.03 38d in 129 aa"
FT                   /db_xref="GOA:A5HYH6"
FT                   /db_xref="InterPro:IPR010406"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH6"
FT                   /protein_id="CAL81835.1"
FT                   /translation="MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISK
FT                   NINNTHDNNLTLGQRTADKIATFGGSWTFIITFCVVLSIWIIGNAVILINKAFDPYPFV
FT                   FLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDE
FT                   QEEYKKNQEILLKKIEELKSN"
FT   misc_feature    333554..333943
FT                   /note="Pfam match to entry PF06210 DUF1003, Protein of
FT                   unknown function (DUF1003), score 204.1, E-value 2.2e-58"
FT                   /inference="protein motif:Pfam:PF06210"
FT   misc_feature    order(333611..333679,333722..333790)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0283 by TMHMM2.0 at aa 65-87 and 102-124"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        334408..334839
FT                   /transl_table=11
FT                   /locus_tag="CBO0284"
FT                   /product="Rrf2-family transcriptional regulator"
FT                   /note="Similar to Bacillus anthracis rrf2 family protein
FT                   ba4743 SWALL:Q81L85 (EMBL:AE017038) (143 aa) fasta scores:
FT                   E(): 2e-33, 65.03 38d in 143 aa"
FT                   /db_xref="GOA:A5HYH7"
FT                   /db_xref="InterPro:IPR000944"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH7"
FT                   /protein_id="CAL81836.1"
FT                   /translation="MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVM
FT                   GMLKRAGLVNVIAGTGGAYLLKDLDQITLLDVYRAVDVVKEGELFQFHDSPNINCPIGA
FT                   NIQSVMEGVLLNAQEAMEQVLENVTMEYIVTGIRKKIKK"
FT   misc_feature    334408..334782
FT                   /note="Pfam match to entry PF02082 Rrf2, Transcriptional
FT                   regulator, score 16.0, E-value 9.2e-07"
FT                   /inference="protein motif:Pfam:PF02082"
FT   CDS_pept        334991..335596
FT                   /transl_table=11
FT                   /locus_tag="CBO0285"
FT                   /product="putative isomerase"
FT                   /note="Similar to Pseudomonas putida
FT                   2-hydroxychromene-2-carboxylate isomerase NahD
FT                   SWALL:NAHD_PSEPU (SWALL:Q51948) (203 aa) fasta scores: E():
FT                   0.00039, 24 38d in 200 aa, and to Burkholderia sp. DBT1
FT                   DbtD SWALL:Q93NA9 (EMBL:AF380367) (207 aa) fasta scores:
FT                   E(): 1.9e-07, 25.37 38d in 201 aa"
FT                   /db_xref="GOA:A5HYH8"
FT                   /db_xref="InterPro:IPR001853"
FT                   /db_xref="InterPro:IPR036249"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH8"
FT                   /protein_id="CAL81837.1"
FT                   /translation="MSLNIKVYFDFVCPFCFLGEESLSEAIKGKDVNIQWMPFELRPEP
FT                   SPRIDPWNDPSKLNAWNNFIDPIANKLGIDMKLPKLSPHPYTNLAFEGYHYASDHGKGD
FT                   EYIKRVFKGFFQEELDIGKIEILANLSEEIGLNKEEFIKVLKNRKYKDKQEKALKHAYE
FT                   EANITAVPTMIIGDEVVQGNTSKESLEKIINKQLIKNN"
FT   misc_feature    335000..335572
FT                   /note="Pfam match to entry PF01323 DSBA, DSBA-like
FT                   thioredoxin domain, score 95.2, E-value 1.3e-25"
FT                   /inference="protein motif:Pfam:PF01323"
FT   CDS_pept        335623..336261
FT                   /transl_table=11
FT                   /locus_tag="CBO0286"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Chromobacterium violaceum hypothetical
FT                   protein cv0714 SWALL:AAQ58390 (EMBL:AE016912) (212 aa)
FT                   fasta scores: E(): 5.1e-27, 45.07 38d in 213 aa"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYH9"
FT                   /protein_id="CAL81838.1"
FT                   /translation="MKIALIGSTGNAGKVILKEALSRGHEVIAIARDVSKIKDTNENLT
FT                   VMQGDILKLDTLGDKLGEVDVLVSAFGPKVGEEDTLIEATNNLITLAKKLGVKRLVVMG
FT                   GAGSLKVQGDVELVNTEDFPEDWKPIALAHSKSLDIYRNEKEVNWAYLSPAALISSGVR
FT                   TGEYSVGDEYLVVDEKGESKISFEDFAVAMIDEIENQKHIRSRFTVAYK"
FT   CDS_pept        336699..337460
FT                   /transl_table=11
FT                   /locus_tag="CBO0287"
FT                   /product="putative transcriptional regulator of
FT                   phosphosugar synthesis"
FT                   /note="Similar to Bacillus subtilis HTH-type
FT                   transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU
FT                   (SWALL:P54717) (254 aa) fasta scores: E(): 4.8e-07, 25.71
FT                   38d in 245 aa"
FT                   /db_xref="GOA:A5HYI0"
FT                   /db_xref="InterPro:IPR000281"
FT                   /db_xref="InterPro:IPR001347"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR035472"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI0"
FT                   /protein_id="CAL81839.1"
FT                   /translation="MDISKFIQNKGLTEIEIEVLNYMIDNINDINKMGVRGVAKNNFTS
FT                   TSTIMRLAKKLGYSGFLEMQYNLLSLTKNELKDNLNDSSFIESLNMDSLLEENSTEAIN
FT                   NFIDILFNDDHKFIFIYANGFSGIVAEYINKKLLVMGKRCILSNGTDSIGVFENNLDFI
FT                   SAIIVISKSGETPMVLNKVKTAKEHNIKVISFTNERENSISKLSDIRFKIKDTNKLDDR
FT                   NLMPNTFFPKVLVLIELLVYEYYKKKNSNVE"
FT   misc_feature    337020..337427
FT                   /note="Pfam match to entry PF01380 SIS, SIS domain, score
FT                   3.9, E-value 0.016"
FT                   /inference="protein motif:Pfam:PF01380"
FT   CDS_pept        337567..339162
FT                   /transl_table=11
FT                   /locus_tag="CBO0288"
FT                   /product="PTS system, IIbc component"
FT                   /note="Similar to Escherichia coli PTS system, maltose and
FT                   glucose-specific IIabc component MalX or b1621
FT                   SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E():
FT                   1.5e-62, 38.43 38d in 523 aa, and to Bacillus subtilis PTS
FT                   system, arbutin-like IIbc component GlvC or GlvCB or glv-2
FT                   or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta
FT                   scores: E(): 5.1e-61, 37.73 38d in 530 aa"
FT                   /note="Also highly similar to CBO0277 (53.2 38d)"
FT                   /db_xref="GOA:A5HYI1"
FT                   /db_xref="InterPro:IPR001996"
FT                   /db_xref="InterPro:IPR003352"
FT                   /db_xref="InterPro:IPR013013"
FT                   /db_xref="InterPro:IPR018113"
FT                   /db_xref="InterPro:IPR036878"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI1"
FT                   /protein_id="CAL81840.1"
FT                   /translation="MGVTMMKEKILNQLQNFSKGMFVPVLILPIAGIIIAIGNILTNAK
FT                   LAEYLPFLKNGMVFGLGKMLSGSLVSILTNLGIIFCVGLAVGLSKKKKAEAGFTSLLVF
FT                   LVFINAMNIFLELNNRLAPQDALRGSGQTMVLGVQVLDMGVFLGIILGIVVAYIHNRFC
FT                   EKEFDGAFQIYGGSRLVFIILIPITVFLAIILSYVWPSVQYLISSLGNFITGAGNFGIF
FT                   TYGTLERLLIPTGLHHLVYTPFLYSPLGGVAEIGGKVFEGARNIYFAEMADPNIAKLSA
FT                   SVIWDARGLSKMFGLIGACLAMYHTALPENKSKIKAILIPAAVTSILAGVTEPIEFSFM
FT                   FVAPILFVIHAVLSGLGMVVLNILGVTAIGPNGLIDFLLYNIPLGVAKTGWPMFILIGL
FT                   GQFVVYYVIFRFLIVKFKLKTPGREEDGNTKLYSKKDYKEKSKANTKSGDSSIAPIVVE
FT                   GLGGKDNILKVDNCYTRLRLVVKDSSLVNEQLLKNETAANGVIIKGENVQVVYGLKVTS
FT                   VRKSVDEYLGIESN"
FT   misc_feature    337618..338631
FT                   /note="Pfam match to entry PF02378
FT                   PTS_EIIC,Phosphotransferase system, EIIC, score 255.8,
FT                   E-value 6.3e-74"
FT                   /inference="protein motif:Pfam:PF02378"
FT   misc_feature    order(337624..337692,337765..337833,337852..337911,
FT                   337969..338037,338098..338166,338179..338247,
FT                   338431..338490,338518..338586,338605..338673,
FT                   338737..338805)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0288 by TMHMM2.0 at aa 20-42, 67-89, 96-115,
FT                   135-157,178-200, 205-227, 289-308, 318-340, 347-369 and
FT                   391-413"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    338224..338286
FT                   /note="PS00079 Multicopper oxidases signature 1."
FT                   /inference="protein motif:ProSite:PS00079"
FT   misc_feature    338923..339027
FT                   /note="Pfam match to entry PF00367
FT                   PTS_EIIB,phosphotransferase system, EIIB, score 60.4,
FT                   E-value 4e-15"
FT                   /inference="protein motif:Pfam:PF00367"
FT   misc_feature    338959..339012
FT                   /note="PS01035 PTS EIIB domains cysteine phosphorylation
FT                   site signature."
FT                   /inference="protein motif:ProSite:PS01035"
FT   CDS_pept        339424..340758
FT                   /transl_table=11
FT                   /gene="glvA2"
FT                   /gene_synonym="glvG2"
FT                   /locus_tag="CBO0289"
FT                   /product="maltose-6'-phosphate glucosidase"
FT                   /EC_number="3.2.1.122"
FT                   /note="Similar to Bacillus subtilis maltose-6'-phosphate
FT                   glucosidase GlvA or GlvG or glv-1 or bsu08180
FT                   SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E():
FT                   7.5e-125, 68.55 38d in 442 aa, and to Escherichia coli
FT                   probable 6-phospho-alpha-glucosidase GlvG or b3681
FT                   SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E():
FT                   7e-59, 72.68 38d in 205 aa"
FT                   /note="Also similar to CBO0278 (73.69 38d) and CBO0267
FT                   (49.21 38d)"
FT                   /note="Also highly similar to CBO0278 (73.69 38d)"
FT                   /db_xref="GOA:A5HYI2"
FT                   /db_xref="InterPro:IPR001088"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR019802"
FT                   /db_xref="InterPro:IPR022616"
FT                   /db_xref="InterPro:IPR036291"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI2"
FT                   /protein_id="CAL81841.1"
FT                   /translation="MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDG
FT                   KRQETIGKALKILLKENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREKDEKIPL
FT                   KYGVIGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILK
FT                   PNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLK
FT                   AYVAENGYLNKVEVDTQHTEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHS
FT                   NAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHER
FT                   MLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVE
FT                   SWIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK"
FT   misc_feature    339442..339501
FT                   /note="1 probable transmembrane helix predicted for CBO0289
FT                   by TMHMM2.0 at aa 7-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    339445..340680
FT                   /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4
FT                   glycosyl hydrolase, score 633.6, E-value 1.2e-187"
FT                   /inference="protein motif:Pfam:PF02056"
FT   CDS_pept        340771..341244
FT                   /transl_table=11
FT                   /locus_tag="CBO0290"
FT                   /product="PTS system, IIa component"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi PTS system, glucose-specific IIa component crr or
FT                   stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908)
FT                   (168 aa) fasta scores: E(): 3.7e-15, 40 38d in 150 aa"
FT                   /db_xref="GOA:A5HYI3"
FT                   /db_xref="InterPro:IPR001127"
FT                   /db_xref="InterPro:IPR011055"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI3"
FT                   /protein_id="CAL81842.1"
FT                   /translation="MFQIFKKKKLYSPLSGKSVALSNVQDEVFSSLMMGDGIAIDPMDQ
FT                   VIVAPCDCLVKLIMKGSKHALGLLMNNGVEILIHVGIDTVSLEGEGFEVLVEEGQKVKL
FT                   GTPLLKFDKDYIISKGYSPMTMMIITEPNGSNINKKYEDITVEGGKTPVIEFS"
FT   misc_feature    340846..341163
FT                   /note="Pfam match to entry PF00358
FT                   PTS_EIIA_1,phosphoenolpyruvate-dependent sugar
FT                   phosphotransferase system, EIIA 1, score 153.8, E-value
FT                   3.1e-43"
FT                   /inference="protein motif:Pfam:PF00358"
FT   misc_feature    340987..341025
FT                   /note="PS00371 PTS EIIA domains phosphorylation site
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00371"
FT   CDS_pept        341382..343097
FT                   /transl_table=11
FT                   /locus_tag="CBO0291"
FT                   /product="probable dehydratase"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 phosphogluconate dehydratase edd or b1851 or z2903
FT                   or ecs2561 SWALL:EDD_ECOLI (SWALL:P25530) (603 aa) fasta
FT                   scores: E(): 5.8e-37, 31.08 38d in 505 aa, and to
FT                   Clostridium acetobutylicum dihydroxyacid dehydratase
FT                   cac3604 SWALL:Q97D76 (EMBL:AE007856) (572 aa) fasta scores:
FT                   E(): 1.4e-145, 63.79 38d in 569 aa"
FT                   /db_xref="GOA:A5HYI4"
FT                   /db_xref="InterPro:IPR000581"
FT                   /db_xref="InterPro:IPR020558"
FT                   /db_xref="InterPro:IPR037237"
FT                   /db_xref="InterPro:IPR042096"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI4"
FT                   /protein_id="CAL81843.1"
FT                   /translation="MISQDIRKIAPEMDPLRRGMGWSVEDLSKPQIIVESTFGDSHPGS
FT                   AHLIKFANNAVQGVAERGGKAARYFATDICDGMAQGHDGINYSLASRDTITSLIEIHAN
FT                   ATPFDGGVFISSCDKAVPSHLMAIGRLNIPSIVVTGGVMEAGPNLLTLEQIGAYSAMYQ
FT                   RKEITEEELTYYKHNACPSCGACSFMGTASTMQVMAEALGLMLPGSALMPATCKDLEDV
FT                   AVEAGKQVVELAKMNLKPKDIVTEKSFENAIIIHAAISGSTNSLLHIPAIAHEFGIKID
FT                   EESFDRIHRYAPYLLNIRPAGKWPAEYFYYAGGVPAIMEEVKHLLHLDVMTVTGKTLGE
FT                   NLEDLKKNGYYKNCDKYLKKVGLTRRDVIKPISEPIGENGAIAILKGNIAPEGAVVKHS
FT                   AVPEEMHKGILKARPFDSEEEAISAIISKKINPGDAVFIRYEGPKGSGMPEMFYTTEAI
FT                   SSDKELSASIALITDGRFSGASKGPAIGHVSPEAAMGGPIALVEENDLIEIDIEKRILQ
FT                   LVGVNGQKLSEEAIDKVLVERKAKWEKRENKYKSGILKIFSERAVSPMKGGYME"
FT   misc_feature    341466..343094
FT                   /note="Pfam match to entry PF00920 ILVD_EDD, Dehydratase
FT                   family, score 768.7, E-value 2.4e-228"
FT                   /inference="protein motif:Pfam:PF00920"
FT   misc_feature    342786..342821
FT                   /note="PS00887 Dihydroxy-acid and 6-phosphogluconate
FT                   dehydratases signature 2."
FT                   /inference="protein motif:ProSite:PS00887"
FT   CDS_pept        343149..343796
FT                   /transl_table=11
FT                   /gene="kdgA"
FT                   /locus_tag="CBO0292"
FT                   /product="probable KDPG/KHG aldolase aldolase"
FT                   /note="Similar to Bacillus subtilis khg/kdpg aldolase
FT                   [includes: 4-hydroxy-2-oxoglutarate aldolase KdgA or
FT                   bsu22100 SWALL:ALKH_BACSU (SWALL:P50846) (196 aa) fasta
FT                   scores: E(): 4.1e-17, 35.6 38d in 191 aa, and to
FT                   Streptococcus agalactiae 2-dehydro-3-deoxyphosphogluconate
FT                   aldolase/4-hydroxy-2-oxoglutarate aldolase eda-2 or sag1907
FT                   SWALL:Q8DXE4 (EMBL:AE014277) (212 aa) fasta scores: E():
FT                   1.6e-39, 54.76 38d in 210 aa"
FT                   /db_xref="GOA:A5HYI5"
FT                   /db_xref="InterPro:IPR000887"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI5"
FT                   /protein_id="CAL81844.1"
FT                   /translation="MIKMKVLNALKKCKIVAVVRGETKEVGIKISESCIKGNVKAIEVA
FT                   YTNKFANDIIEELSEKYSKDDEVVIGAGTVLDSETARMAILRGAKYIVSPSFSEETAKI
FT                   CNRYNIPYIPGVMTITEIVTAYESGVDIVKVFPGSAFGQGYIKSIKGPLPYANIMVTGG
FT                   VNLDNIDSWANTDVDLVGIGGELNKLGELGKFDEIELICNQYVDKFNKARGI"
FT   misc_feature    343164..343751
FT                   /note="Pfam match to entry PF01081 Aldolase, KDPG and KHG
FT                   aldolase, score 90.0, E-value 4.9e-24"
FT                   /inference="protein motif:Pfam:PF01081"
FT   CDS_pept        343798..344802
FT                   /transl_table=11
FT                   /gene="kdgK"
FT                   /locus_tag="CBO0293"
FT                   /product="2-dehydro-3-deoxygluconokinase"
FT                   /EC_number="2.7.1.45"
FT                   /note="Similar to Escherichia coli
FT                   2-dehydro-3-deoxygluconokinase KdgK or b3526
FT                   SWALL:KDGK_ECOLI (SWALL:P37647) (309 aa) fasta scores: E():
FT                   2e-08, 26.46 38d in 291 aa"
FT                   /db_xref="GOA:A5HYI6"
FT                   /db_xref="InterPro:IPR011611"
FT                   /db_xref="InterPro:IPR029056"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI6"
FT                   /protein_id="CAL81845.1"
FT                   /translation="MKVVGFGEILLRLSTKKGMLFLNSKEFDSNYGGGEANVLISLSRF
FT                   DIETRMITKISKDQIGEGIINYLKEKSVETSFIKRENKRTPIYFVEVGSGNRSSKIIYD
FT                   RDNSAFGSITEEDINIKEALKDVDVFHFSGITLAISEEVRKVTLNILKYCKNNNILVSY
FT                   DSNYRAKMWSLEEARKATKEILPYINIFSAGILDAENILDMSCDLEDKYEKLNYYYKEI
FT                   TKAYPNIKHIFSSTREIKSVSANSLQCNYYTNNKLYSSKKHTFDDIIDRIGAGDALTAG
FT                   VIYSIINKKSPQYTCEFATACSVLKHSIHGDANLVNVEEVENLISNGIGRISR"
FT   misc_feature    343801..344760
FT                   /note="Pfam match to entry PF00294 pfkB, pfkB family
FT                   carbohydrate kinase, score 95.5, E-value 1.1e-25"
FT                   /inference="protein motif:Pfam:PF00294"
FT   CDS_pept        345062..346861
FT                   /transl_table=11
FT                   /gene="adeC"
FT                   /gene_synonym="ade"
FT                   /locus_tag="CBO0294"
FT                   /product="adenine deaminase"
FT                   /EC_number="3.5.4.2"
FT                   /note="Similar to Bacillus subtilis adenine deaminase AdeC
FT                   or Ade or bsu14520 SWALL:ADEC_BACSU (SWALL:P39761) (577 aa)
FT                   fasta scores: E(): 5e-63, 36.17 38d in 575 aa"
FT                   /db_xref="GOA:A5HYI7"
FT                   /db_xref="InterPro:IPR006679"
FT                   /db_xref="InterPro:IPR006680"
FT                   /db_xref="InterPro:IPR011059"
FT                   /db_xref="InterPro:IPR026912"
FT                   /db_xref="InterPro:IPR032466"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI7"
FT                   /protein_id="CAL81846.1"
FT                   /translation="MFNKFDTKPLWEVSKTLSSVAQGLEPADMVIINSRLINVCTREVI
FT                   ENTDVAISCGRIALVGDAKHCIGENTEVIDAKGQYIAPGFLDGHIHVESSMLSVSEYAR
FT                   SVVPHGTVGIYMDPHEICNVLGLNGVRYMIEDGKGTPLKNMVTTPSCVPAVPGFEDTGA
FT                   AVGPEDVRETMKWDEIVGLGEMMNFPGILYSTDHAHGVVGETLKASKTVTGHYSLPETG
FT                   KGLNGYIASGVRCCHESTRAEDALAKMRLGMYAMFREGSAWHDLKEVSKAITENKVDSR
FT                   FAVLISDDTHPHTLLKDGHLDHIIKRAIEEGIEPLTAIQMVTINCAQCFQMDHELGSIT
FT                   PGKCADIVFIEDLKDVKITKVIIDGNLVAKGGLLTTSIAKYDYPEDAMNSMHIKNKITP
FT                   DSFNIMAPNKEKITARVIEIIPERVGTYERHVELNVKDDKVQCDPSKDVLKAVVFERHH
FT                   ETGTAGYGFVKGFGIKRGAMAATVAHDAHNLLVIGTNDEDMALAANTLIECGGGMVAVQ
FT                   DGKVLGLVPLPIAGLMSNKPLEEMAEMVEKLDSAWKEIGCDIVSPFMTIALIPLACLPE
FT                   LRLTNRGLVDCNKFEFVSLFVEE"
FT   misc_feature    345299..346114
FT                   /note="Pfam match to entry PF01979
FT                   Amidohydro_1,Amidohydrolase family, score 97.0, E-value
FT                   3.9e-26"
FT                   /inference="protein motif:Pfam:PF01979"
FT   CDS_pept        347264..347941
FT                   /transl_table=11
FT                   /gene="cssR"
FT                   /locus_tag="CBO0295"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Bacillus subtilis transcriptional
FT                   regulatory protein CssR or bsu33010 SWALL:CSSR_BACSU
FT                   (SWALL:O32192) (225 aa) fasta scores: E(): 1.1e-40, 50.89
FT                   id in 224 aa"
FT                   /db_xref="GOA:A5HYI8"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI8"
FT                   /protein_id="CAL81847.1"
FT                   /translation="MGRKVYLVEDEKSLNILLEKYLQREGYEVTTFFNGSSAIERIKDV
FT                   PDIWILDIMLPDIDGYQIIKAVKENNKNTPVIFMSARNEELDRVVGLELGSDDYLSKPF
FT                   LPRELIIRTNKLMERIYGKSNNSTVDIITNIGQYKISKKQRTVFFEEKEIQLTNKEFEL
FT                   LNFFIENKNNVISREQILISIWGEDYFGSDRVIDDTIRRLRKKMDKLDLETVYGYGYKL
FT                   VVK"
FT   misc_feature    347270..347626
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 104.9, E-value 1.6e-28"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    347714..347929
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 78.5, E-value 1.4e-20"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        347941..349326
FT                   /transl_table=11
FT                   /gene="cssS"
FT                   /locus_tag="CBO0296"
FT                   /product="two-component sensor kinase"
FT                   /EC_number="2.7.3.-"
FT                   /note="Similar to Bacillus subtilis sensor protein CssS or
FT                   bsu33020 SWALL:CSSS_BACSU (SWALL:O32193) (451 aa) fasta
FT                   scores: E(): 9e-33, 30.17 38d in 464 aa"
FT                   /db_xref="GOA:A5HYI9"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYI9"
FT                   /protein_id="CAL81848.1"
FT                   /translation="MKRLRFKSLTMRIWTTFTAIILIIICSISFLYLVAFKRISENSRL
FT                   EDLEVAHDVLLNSNNLNEQNRFDELKNLKGSDHFIVKIDENDKYKIIDIGKRKEEPPPI
FT                   EKKNPPPGPASDGIKMWMASYIIGNNIQQKQFKEYHNNMKFIFIISSIKNTGGEKLYLI
FT                   SYIPEIQDNVLLYTVIIIGIIFIGIGFFTAKLVANYISRPLRELEDYTVKIAHKDWREP
FT                   IKIKNDDEIGRLVDSMNRMQKELKKIDEEEKMFLQSISHDLKTPVMVIMSHAQAIIDGM
FT                   YIESVEETAEIIKDEAAILEKKIKQLLYLNTLAYTLENDSENIGFELHNLLFNIISRFE
FT                   IVNSKIQWNLDIDKVVIKGNAEKIQVAIENILDNGLRYAERKIAITLKKENSVAVLEIY
FT                   NDGPNIDKNNIEHIFENLYKDRTGNFGLGLAISKKIIDFYNGEIKAVNRDNGVSFIIKY
FT                   PID"
FT   sig_peptide     347941..348049
FT                   /gene="cssS"
FT                   /locus_tag="CBO0296"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.489 between residues 37 and 38"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(347977..348045,348457..348525)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0296 by TMHMM2.0 at aa 13-35 and 173-195"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    348472..348681
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   60.3, E-value 4.2e-15"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    348691..348888
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 36.3, E-value 7.6e-08"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    349015..349323
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score
FT                   84.0,E-value 3.3e-22"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        349611..350579
FT                   /transl_table=11
FT                   /locus_tag="CBO0297"
FT                   /product="probable glycosyl transferase"
FT                   /note="Similar to Escherichia coli bactoprenol glucosyl
FT                   transferase homolog from prophage cps-53 yfdh or b2351
FT                   SWALL:GTRB_ECOLI (SWALL:P77293) (306 aa) fasta scores: E():
FT                   2.1e-39, 40.26 38d in 298 aa"
FT                   /db_xref="GOA:A5HYJ0"
FT                   /db_xref="InterPro:IPR001173"
FT                   /db_xref="InterPro:IPR029044"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ0"
FT                   /protein_id="CAL81849.1"
FT                   /translation="MINKIVYSIIVPLYNEELVIDESYRRLKAVMDSTKENYEIIFIND
FT                   GSRDSTKEKADNICKKDEKIKLVNFSRNFGHQAAITAGMDVSIGRAIVVIDADLQDPPE
FT                   VILKMIEKWKDGYEVIYGKRAKREGEGFFKKFTAGMFYRLLKNITNIDIPVDTGDFRLI
FT                   DRKVCDTLTSLPEKNRYVRGLVSWVGYKQTAVEFVRQERFAGETKYPLKKMLKLAFDGI
FT                   TSFSYKPLTIASYAGGIIFSIGTIVFITEIIKAVINCTDILSLGMILSINLIMFGLIFF
FT                   TIGIMGQYIGRIFDESKNRPMYIIDNTINYEKADKKYEINN"
FT   misc_feature    349632..350126
FT                   /note="Pfam match to entry PF00535 Glycos_transf_2,Glycosyl
FT                   transferase, score 131.5, E-value 1.6e-36"
FT                   /inference="protein motif:Pfam:PF00535"
FT   misc_feature    order(350301..350369,350412..350480)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0297 by TMHMM2.0 at aa 231-253 and 268-290"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        350563..350982
FT                   /transl_table=11
FT                   /locus_tag="CBO0298"
FT                   /product="teichoic acid glycosylation protein"
FT                   /note="Similar to Actinobacillus actinomycetemcomitans
FT                   dTDP-glucose-4-keto-6-deoxy-D-glucose reductase Fcd
FT                   SWALL:Q9AQB3 (EMBL:AF213680) (130 aa) fasta scores: E():
FT                   1.3e-05, 30.46 38d in 128 aa, and to Listeria innocua
FT                   teichoic acid glycosylation protein GtcA SWALL:Q9KJU8
FT                   (EMBL:AF160251) (145 aa) fasta scores: E(): 0.0023, 25.58
FT                   id in 129 aa"
FT                   /db_xref="GOA:A5HYJ1"
FT                   /db_xref="InterPro:IPR007267"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ1"
FT                   /protein_id="CAL81850.1"
FT                   /translation="MKLITKVNKCIFHGKFKHISRFSMVGVANTTIDFLMFTVFNELVG
FT                   VGYITSQIIGYSFGIMNSFIFNKKWTFKERKVSKKVLYELMQFIIINLISLIITVFVMN
FT                   LLAKNFNIDVYLAKVIVTIIAQVTNFVAYKFIVFK"
FT   misc_feature    350623..350976
FT                   /note="Pfam match to entry PF04138 GtrA, GtrA-like protein,
FT                   score 93.7, E-value 4e-25"
FT                   /inference="protein motif:Pfam:PF04138"
FT   misc_feature    order(350689..350757,350815..350883,350902..350970)
FT                   /note="3 probable transmembrane helices predicted for
FT                   CBO0298 by TMHMM2.0 at aa 50-72, 92-114 and 121-143"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        351101..353374
FT                   /transl_table=11
FT                   /locus_tag="CBO0299"
FT                   /product="putative dolichyl-phosphate-mannose-protein
FT                   mannosyltransferase"
FT                   /note="Similar to Streptomyces carzinostaticus subsp.
FT                   neocarzinostaticus membrane protein SWALL:Q84HC4
FT                   (EMBL:AY117439) (720 aa) fasta scores: E(): 2.4e-25,27.37
FT                   38d in 767 aa"
FT                   /db_xref="GOA:A5HYJ2"
FT                   /db_xref="InterPro:IPR038731"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ2"
FT                   /protein_id="CAL81851.1"
FT                   /translation="MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSM
FT                   TLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLI
FT                   YVIVKRSFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKL
FT                   KYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSL
FT                   SWAFIVDLIPEGNRPYVGSSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQ
FT                   QKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQGQPPSMDNGEMQGTPPNTQDG
FT                   GKGNANPPNGDGKGPGGMPPGDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQII
FT                   WLFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTM
FT                   LAPPISALVGIGVVSMWKLYNENGWKSWILPVALIADGLTQILILSYYYNISNTAKILT
FT                   TIVAVLCIVSSIILAIVNLRKNKKDILKFKNIKFKKSLVTIALMGLLITPLVCSATTIF
FT                   YPVSGTFPSAGLSLMTNKEKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYA
FT                   SDIIINTGESVMALGGFFGTDKVITLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVK
FT                   ENGKVVSESEWKDSNEINSEGVNKDNNNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDT
FT                   TTKK"
FT   sig_peptide     351101..351197
FT                   /locus_tag="CBO0299"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.447 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    351134..351793
FT                   /note="Pfam match to entry PF02366
FT                   PMT,Dolichyl-phosphate-mannose-protein
FT                   mannosyltransferase,score 72.9, E-value 6.9e-19"
FT                   /inference="protein motif:Pfam:PF02366"
FT   misc_feature    order(351137..351196,351254..351322,351356..351424,
FT                   351434..351502,351521..351574,351611..351679,
FT                   351716..351784,352292..352345,352382..352441,
FT                   352451..352519,352553..352621,352634..352702,
FT                   352763..352831)
FT                   /note="13 probable transmembrane helices predicted for
FT                   CBO0299 by TMHMM2.0 at aa 13-32, 52-74, 86-108,
FT                   112-134,141-158, 171-193, 206-228, 398-415, 428-447,
FT                   451-473,485-507, 512-534 and 555-577"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        353730..354767
FT                   /transl_table=11
FT                   /locus_tag="CBO0300"
FT                   /product="AraC-family transcriptional regulator"
FT                   /note="Similar to Clostridium tetani transcriptional
FT                   regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941)
FT                   (329 aa) fasta scores: E(): 4.8e-11, 27.5 38d in 349 aa"
FT                   /db_xref="GOA:A5HYJ3"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="InterPro:IPR020449"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ3"
FT                   /protein_id="CAL81852.1"
FT                   /translation="MKHKFHINTKQGCSSMIMQYSSIRTQFATIRDSMNFNDEKEVIYD
FT                   IKPQYGKGCIKFYKLMGNVMLIIYDTIFNHDMITEFDLSEEYFEIEYCVDGCLNIHEDK
FT                   VGNMCLSKNELSISMSRETCGKVINCAGQKYQGISITTEKSAIASYFGSCGIELWEDTI
FT                   EELENELRNQYYQGINVSLEIANIFLQIFNCSLPEKSKILFFESKVMEILSKIVSYEIL
FT                   GTNKINQLQMDEFEINQIKKIPEVLMKNLYELPTVNILSKQLAINKNKLAKGFKVIYGD
FT                   TIFRYHRKMCLERAAILLIDTDKSINEIALDVGYSNPSNFCYAFKKEFGVTPLQYKDDS
FT                   LKLVN"
FT   misc_feature    354609..354743
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   50.5, E-value 3.9e-12"
FT                   /inference="protein motif:Pfam:PF00165"
FT   CDS_pept        355032..356063
FT                   /transl_table=11
FT                   /locus_tag="CBO0301"
FT                   /product="putative iron(III)-binding periplasmic protein"
FT                   /note="Similar to Clostridium tetani putative iron(III)
FT                   dicitrate-binding periplasmic protein ctc00960 SWALL:Q896P0
FT                   (EMBL:AE015939) (354 aa) fasta scores: E(): 4.9e-30, 32 38d
FT                   in 350 aa"
FT                   /db_xref="InterPro:IPR002491"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ4"
FT                   /protein_id="CAL81853.1"
FT                   /translation="MLKKCVALFIGVIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKS
FT                   KSNYPVNIKVYTDEGKEIVQTIQKEPKRVVIMGQSMAELMIKFGLQDKVVGVGYLDKSF
FT                   SKYDDEISKMPIIAKSWPSKEAIIALKPDIIYSMSSAFKEDRVGDIYSWNDRGIPVLPA
FT                   VNFTIGRSIDEYFKDIKNFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLV
FT                   ASAGRENYDYYPPSGCIIDEVIEGAGGKYIELSKDSYMEMSIESIIAANPEKIIITEFQ
FT                   GSDREKIKNKILSNKRLQNVIAIKTGNVMVVDYTNAIRGSLELSDLYEDVAKFIHPELF
FT                   GGN"
FT   sig_peptide     355032..355110
FT                   /locus_tag="CBO0301"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.602 between residues 27 and 28"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    355044..355112
FT                   /note="1 probable transmembrane helix predicted for CBO0301
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    355062..355094
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    355110..355133
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    355242..355976
FT                   /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic
FT                   binding protein, score 51.7, E-value 1.7e-12"
FT                   /inference="protein motif:Pfam:PF01497"
FT   CDS_pept        356066..357184
FT                   /transl_table=11
FT                   /locus_tag="CBO0302"
FT                   /product="putative iron(III) transport system, permease
FT                   protein"
FT                   /note="Similar to Bordetella avium BhuU bhuU SWALL:Q8L1U4
FT                   (EMBL:AY095952) (334 aa) fasta scores: E(): 1.2e-35,38.69
FT                   38d in 336 aa, and to Clostridium tetani iron(iii)
FT                   dicitrate transport system permease protein fecd or
FT                   ctc00961 SWALL:Q896N9 (EMBL:AE015939) (377 aa) fasta
FT                   scores: E(): 9.5e-69, 53.93 38d in 343 aa"
FT                   /db_xref="GOA:A5HYJ5"
FT                   /db_xref="InterPro:IPR000522"
FT                   /db_xref="InterPro:IPR037294"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ5"
FT                   /protein_id="CAL81854.1"
FT                   /translation="MLQTGKVGVAESNAENYGCTFKKHSLFTTIIIGLVTILILSIIIS
FT                   VSIGQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGL
FT                   TLCGVVMQASVQNPLADPYILGISSGASLGATFSIMIGFGAAGTLSELGVAFWAFIGAF
FT                   GAGALVMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGS
FT                   LTSAQWGKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISV
FT                   AVTGVIVATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIP
FT                   NGELPIGIITSLLGAPVFMYMLVKRSYGFGGK"
FT   misc_feature    order(356141..356209,356330..356398,356432..356500,
FT                   356528..356596,356615..356683,356741..356809,
FT                   356897..356965,357008..357067,357086..357154)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0302 by TMHMM2.0 at aa 26-48, 89-111, 123-145,
FT                   155-177,184-206, 226-248, 278-300, 315-334 and 341-363"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    356210..357157
FT                   /note="Pfam match to entry PF01032 FecCD, FecCD transport
FT                   family, score 348.0, E-value 1.1e-101"
FT                   /inference="protein motif:Pfam:PF01032"
FT   CDS_pept        357186..357956
FT                   /transl_table=11
FT                   /locus_tag="CBO0303"
FT                   /product="putative iron(III) transport system, ATP-binding
FT                   protein"
FT                   /note="Similar to Streptococcus agalactiae FhuC fhuC
FT                   SWALL:Q8VQV6 (EMBL:AF452237) (264 aa) fasta scores: E():
FT                   5.2e-26, 31.9 38d in 257 aa, and to Clostridium tetani
FT                   putative hemin transport system ATP-binding protein fece
FT                   fece or ctc00962 SWALL:Q896N8 (EMBL:AE015939) (252 aa)
FT                   fasta scores: E(): 4.8e-47, 55.15 38d in 252 aa"
FT                   /db_xref="GOA:A5HYJ6"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ6"
FT                   /protein_id="CAL81855.1"
FT                   /translation="MNLKVDNIFVTLSGRKIVKDISLQVDDGKFVGIIGPNGCGKSTLL
FT                   KSIYKVINPEKGSVFLGEKDVLKSKAKSVSKEMGVVGQFNDLSFDFSVYDMVMMGRTPH
FT                   KNLMEPDNKEDYEIVHNALKKVNLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILD
FT                   EPTNHLDIKYQLQIFSIVKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEI
FT                   LTKELIKSVYEIDCEIYTNPITGEMAIAYKMPKY"
FT   misc_feature    357267..357818
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 199.1, E-value 7.1e-57"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    357288..357311
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    357600..357644
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        357992..359320
FT                   /transl_table=11
FT                   /locus_tag="CBO0304"
FT                   /product="putative drug/sodium antiporter"
FT                   /note="Similar to Clostridium acetobutylicum probable
FT                   cation efflux pump cac3354 SWALL:Q97DW6 (EMBL:AE007832)
FT                   (452 aa) fasta scores: E(): 9.7e-57, 38.73 38d in 426 aa"
FT                   /db_xref="GOA:A5HYJ7"
FT                   /db_xref="InterPro:IPR002528"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ7"
FT                   /protein_id="CAL81856.1"
FT                   /translation="METDMTKGKPMGIIVKFFIPMFIGNLFQQIYNVVDSIVIGRFVGN
FT                   EAFAAVGSCFLIMSFMTSILIGLAMGASAFFSQLYGAKQYDEMKKAISTSFFFILSISI
FT                   LLSLITNVFLYEIIELFQMPKDTVTYSAEYLRYILTGLIFTGLYNICAYLLRSIGDSKS
FT                   PLYFLIVSCILNTILDLIFVLVFNMGVSGVGLATFIAQGLSALWCAFYTVKHMKFLDFK
FT                   RKDIVFSRKLFRTILSYSVLTAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEF
FT                   ANRPLQDLSNAFSTYVAQNKGAGNIERIRQGFYAILKVIALISFIISIVVFIFAPNLIS
FT                   IFVKKESIDIIQVGVGYLRIVCIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRV
FT                   ALAYGLARTSMGFTGICWSIVIGWLLSNALGRFMYKKVMANPI"
FT   misc_feature    order(358025..358093,358136..358204,358265..358333,
FT                   358391..358459,358478..358546,358556..358624,
FT                   358685..358738,358751..358819,358928..358996,
FT                   359054..359122,359141..359209,359222..359281)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0304 by TMHMM2.0 at aa 12-34, 49-71, 92-114,
FT                   134-156,163-185, 189-211, 232-249, 254-276, 313-335,
FT                   355-377,384-406 and 411-430"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    358049..358534
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score 133.2,
FT                   E-value 5e-37"
FT                   /inference="protein motif:Pfam:PF01554"
FT   misc_feature    358718..359203
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score
FT                   95.8,E-value 8.9e-26"
FT                   /inference="protein motif:Pfam:PF01554"
FT   CDS_pept        complement(359465..360436)
FT                   /transl_table=11
FT                   /locus_tag="CBO0305"
FT                   /product="AraC-family transcriptional regulator"
FT                   /note="Similar to Clostridium tetani transcriptional
FT                   regulatory protein ctc00913 SWALL:Q896T5 (EMBL:AE015939)
FT                   (334 aa) fasta scores: E(): 1.4e-09, 26.42 38d in 333 aa"
FT                   /db_xref="GOA:A5HYJ8"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="InterPro:IPR018062"
FT                   /db_xref="InterPro:IPR020449"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ8"
FT                   /protein_id="CAL81857.1"
FT                   /translation="MKIDETMKVIKKFALQLNCKEYDYGNGHIHRLPKENGDSWFVEVN
FT                   PADGLLLSDAYFSLLKPVTYIYNIPNNHILICSLYSGNITVVENGKKSKRLYQGIHFFV
FT                   NRGKKIKIIINTDEPIWYTFALVFEVFILKYIKDFLSQASYILSKDILLKPNYFNTPEL
FT                   LMIFEQLKYTIRSCDLPHMYYIGKIYEIFAIIIRNLENEKYLNIPRHNHLSYQNKQFMW
FT                   TLKEEIDKNILNPPTIEEMKNIAEMSESKLRRCFKATYGKTIYEYIRYKKMEQAIRFLS
FT                   HDEMSIHNISTTLGYESPSKFSAAFKKVYGITPSAFRKSFNL"
FT   misc_feature    complement(359480..359614)
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   45.8, E-value 1e-10"
FT                   /inference="protein motif:Pfam:PF00165"
FT   misc_feature    complement(359495..359623)
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00041"
FT   misc_feature    complement(359630..359770)
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   13.7, E-value 0.074"
FT                   /inference="protein motif:Pfam:PF00165"
FT   misc_feature    complement(359666..359731)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1093.000, SD 2.91 at aa 236-257, sequence
FT                   PTIEEMKNIAEMSESKLRRCFK"
FT   repeat_region   360511..360544
FT                   /rpt_family="CB.431"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="ttaattttaaaactgtaaatataaataatacatt"
FT                   /inference="ab initio prediction:REPuter"
FT   repeat_region   360546..360593
FT                   /rpt_family="CB.940"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="ataaagtaattcattttgctaagaagttctaaatttaactccat
FT                   taaa"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        360883..361821
FT                   /transl_table=11
FT                   /locus_tag="CBO0306"
FT                   /product="putative ferrichrome-binding protein"
FT                   /note="Similar to Bacillus subtilis ferrichrome-binding
FT                   protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU
FT                   (SWALL:P37580) (315 aa) fasta scores: E(): 5.4e-25, 31.73
FT                   id in 312 aa. Also similar to CBO0310 35.144 38dentity in
FT                   313 aa overlap"
FT                   /db_xref="GOA:A5HYJ9"
FT                   /db_xref="InterPro:IPR002491"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYJ9"
FT                   /protein_id="CAL81858.1"
FT                   /translation="MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESDKDHKTRT
FT                   ISTAMGKVEVPANPKRIVINYFQGDLLALGVKPLATSRMEGDSALKNELKGVKIVEKWE
FT                   PEEIMAFKPDLIIVISEEEYKKFNKIAPIVLIPFTKISSEERLTLIAEAVGKQEEAKKV
FT                   INNFKNKVETSKKKLEAAGVMDKTFTLIEQDTKQITVFGNKWGRGGEILYDYLGVKAPN
FT                   VIKKEIINGEQYKNVSLEAFPEYSGDYIIQAVWNYGGDNLKDNNLWINLPAAKENRVIK
FT                   TDWNLFFYKDLYSMDKQLDYIVNAILKTTKK"
FT   sig_peptide     360883..360964
FT                   /locus_tag="CBO0306"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.273 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    360901..360954
FT                   /note="1 probable transmembrane helix predicted for CBO0306
FT                   by TMHMM2.0 at aa 7-24"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    360925..360957
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    361057..361740
FT                   /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic
FT                   binding protein, score 110.0, E-value 4.9e-30"
FT                   /inference="protein motif:Pfam:PF01497"
FT   CDS_pept        361882..361998
FT                   /transl_table=11
FT                   /locus_tag="CBO0307"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK0"
FT                   /protein_id="CAL81859.1"
FT                   /translation="MDIYIAWKAIFNKNTFCINKKAVDKIYLSTAYGVVVLA"
FT   CDS_pept        complement(362160..363128)
FT                   /transl_table=11
FT                   /locus_tag="CBO0308"
FT                   /product="AraC-family transcriptional regulator"
FT                   /note="Similar to Clostridium tetani transcriptional
FT                   regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941)
FT                   (329 aa) fasta scores: E(): 7.3e-10, 22.29 38d in 323 aa"
FT                   /db_xref="GOA:A5HYK1"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="InterPro:IPR020449"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK1"
FT                   /protein_id="CAL81860.1"
FT                   /translation="MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNP
FT                   AKGLFVSSAWFTPSEQIVYTINSSNPFMMLFCIDCGEIVYSQQGKKKQALFPITHLIIN
FT                   PQKQFTFTFFKDVHYCFTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTPDIM
FT                   LIFEQIRWAVRNTDMPLLSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYK
FT                   VKNKIDEDILNLPDTIELCRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSA
FT                   DHLSIRNISELCGYKNPAKFAAAFKNIHGITPSDFRKSFNL"
FT   misc_feature    complement(362175..362309)
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   36.9, E-value 4.9e-08"
FT                   /inference="protein motif:Pfam:PF00165"
FT   misc_feature    complement(362325..362465)
FT                   /note="Pfam match to entry PF00165 HTH_AraC, Bacterial
FT                   regulatory helix-turn-helix proteins, araC family, score
FT                   8.4, E-value 0.31"
FT                   /inference="protein motif:Pfam:PF00165"
FT   misc_feature    complement(362361..362426)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1115.000, SD 2.98 at aa 235-256, sequence
FT                   PDTIELCRIAGMSESKLRQSFK"
FT   CDS_pept        363302..363415
FT                   /transl_table=11
FT                   /locus_tag="CBO0309"
FT                   /product="NADH dehydrogenase subunit 1 (partial)"
FT                   /note="Similar to N-terminal regions of several NADH
FT                   dehydrogenase subunit 1 SWALL:Q953M0 (EMBL:AF348079) (318
FT                   aa) fasta scores: E(): 2.1, 47.05 38d in 34 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK2"
FT                   /protein_id="CAL81861.1"
FT                   /translation="MTSEKEPLKPLTAEFINATILKVRLVLHLYIAQTLSD"
FT   CDS_pept        363446..364375
FT                   /transl_table=11
FT                   /gene="fhuD1"
FT                   /locus_tag="CBO0310"
FT                   /product="putative ferrichrome-binding protein"
FT                   /note="Similar to Bacillus subtilis ferrichrome-binding
FT                   protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU
FT                   (SWALL:P37580) (315 aa) fasta scores: E(): 6.9e-19, 32.39
FT                   id in 321 aa. Also similar to CBO0306 35.144 38dentity in
FT                   313 aa overlap"
FT                   /db_xref="GOA:A5HYK3"
FT                   /db_xref="InterPro:IPR002491"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK3"
FT                   /protein_id="CAL81862.1"
FT                   /translation="MKKLLSLFCAIFMTTVIFAGCSSSKNEKKEEATVRTITTVKGDIE
FT                   VPANPKRVVANWYVGEVITLGLNLVGYNAWEQETMPFYDKLKATKKIKKWEPEEVMNLK
FT                   PDLIITYDEADFDKFSKVAPVLVIPESKNSIDRIKFIGEATGRTTEAKEAVSKFEKKLD
FT                   AVKKTFKSDKFVGKTFSIMEDWGPTGEFSGIYYETGSRGGTLVYDYLGLKYPDKLKELI
FT                   EKSKKGRGSISYEVAHEYFGDYILWFQQEGKESKYSKTDIWKSIPAVAAGRVVEIPGKY
FT                   SGLFYYSDITSLTEQLDYMSDAINSLVK"
FT   sig_peptide     363446..363530
FT                   /gene="fhuD1"
FT                   /locus_tag="CBO0310"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.382 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    363476..363508
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    363593..364288
FT                   /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic
FT                   binding protein, score 74.8, E-value 1.9e-19"
FT                   /inference="protein motif:Pfam:PF01497"
FT   CDS_pept        364402..365430
FT                   /transl_table=11
FT                   /gene="fhuB1"
FT                   /locus_tag="CBO0311"
FT                   /product="ferrichrome transport system permease protein"
FT                   /note="Similar to Bacillus subtilis ferrichrome transport
FT                   system permease protein FhuB or bsu33310 SWALL:FHUB_BACSU
FT                   (SWALL:P49936) (384 aa) fasta scores: E(): 2.1e-53, 46.52
FT                   id in 331 aa"
FT                   /db_xref="GOA:A5HYK4"
FT                   /db_xref="InterPro:IPR000522"
FT                   /db_xref="InterPro:IPR037294"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK4"
FT                   /protein_id="CAL81863.1"
FT                   /translation="MQKTYNKKRQLGALNFTIYMIVGVVLLVIMSAASISFGAADMNLT
FT                   TAWGAIFNFDSSLTEHQIIQTLRLPRIAANIIVGSSLAICGAIMQGTTRNPLADSGLMG
FT                   ISSGATFAMAFCMAFLPGGSYGQMMLFACIGAAITTGMTYFIASIGRGGMKPQRLVLAG
FT                   ISISMLFGAFSQYLSIKYKLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVAFVISP
FT                   SITVLNLGDDAAIGLGLNTKKVKGVSTVVVLILTGISVIVVGPVGFVGLIVPHIVRYLI
FT                   GVDYRYIIPASGLYGALITVTADLVGRLINKPYETPIGIIFALIGVPYFLYLTRIQRRE
FT                   FE"
FT   sig_peptide     364402..364516
FT                   /gene="fhuB1"
FT                   /locus_tag="CBO0311"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.499 between residues 39 and 40"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(364438..364506,364600..364668,364702..364770,
FT                   364783..364851,364870..364938,365023..365091,
FT                   365152..365220,365263..365331,365350..365409)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0311 by TMHMM2.0 at aa 13-35, 67-89, 101-123,
FT                   128-150,157-179, 208-230, 251-273, 288-310 and 317-336"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    364513..365409
FT                   /note="Pfam match to entry PF01032 FecCD, FecCD transport
FT                   family, score 372.8, E-value 3.7e-109"
FT                   /inference="protein motif:Pfam:PF01032"
FT   CDS_pept        365427..366440
FT                   /transl_table=11
FT                   /gene="fhuG1"
FT                   /locus_tag="CBO0312"
FT                   /product="ferrichrome transport system permease protein"
FT                   /note="Similar to Bacillus subtilis ferrichrome transport
FT                   system permease protein FhuG or bsu33300 SWALL:FHUG_BACSU
FT                   (SWALL:P49937) (336 aa) fasta scores: E(): 3.4e-51, 41.39
FT                   id in 343 aa"
FT                   /db_xref="GOA:A5HYK5"
FT                   /db_xref="InterPro:IPR000522"
FT                   /db_xref="InterPro:IPR037294"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK5"
FT                   /protein_id="CAL81864.1"
FT                   /translation="MKKKGYSVSRGLTIILLLTIILLVVAVISVNSGKMNLSPSEVFNV
FT                   LIGRGTDKQNLIVYNFRLPRIVLTMLVGIGMGTAGCVMQSLLRNDMASPGTLGISSGSG
FT                   LFVLLFIVIFKVDSVSSAIALPLLAFVGGMTAAILIFLLSYRRGKSISPTGLILTGVAV
FT                   GSGYSAVTMMLTLKLDEKQMDFVQRWSAGSLWGDNWTYISILAPWVLILFLYVFYKSRI
FT                   LNTLNLGNQTAKGLGVAVKREFIGLTVAAVALSSGSVALGGNFFFVGMISPHMARKFVG
FT                   SNHKLLIPTASLVGSIIILLSDTITRTISFGSDIPTGIVITVLSTPYFLYLLVKSN"
FT   sig_peptide     365427..365514
FT                   /gene="fhuG1"
FT                   /locus_tag="CBO0312"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.419 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(365445..365513,365619..365687,365706..365765,
FT                   365793..365861,365886..365954,366021..366080,
FT                   366171..366239,366282..366332,366351..366419)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0312 by TMHMM2.0 at aa 7-29, 65-87, 94-113,
FT                   123-145,154-176, 199-218, 249-271, 286-302 and 309-331"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    365523..366431
FT                   /note="Pfam match to entry PF01032 FecCD, FecCD transport
FT                   family, score 320.4, E-value 2.3e-93"
FT                   /inference="protein motif:Pfam:PF01032"
FT   CDS_pept        366451..367281
FT                   /transl_table=11
FT                   /gene="fhuC1"
FT                   /locus_tag="CBO0313"
FT                   /product="ferrichrome ABC transporter, ATP-binding protein"
FT                   /note="Similar to Bacillus subtilis ferrichrome transport
FT                   ATP-binding protein FhuC or bsu33290 SWALL:FHUC_BACSU
FT                   (SWALL:P49938) (269 aa) fasta scores: E(): 3.1e-60, 63.29
FT                   id in 267 aa"
FT                   /db_xref="GOA:A5HYK6"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK6"
FT                   /protein_id="CAL81865.1"
FT                   /translation="MKSIETKNLDIAYEDTLIVKELNMQIPKGKITSIIGANGCGKSTI
FT                   LKSVGRILKPKKGVVHLSGQDISKLSTKEIAKKMAILPQNPTAPSGLTVSELVAYGRFP
FT                   HQKGFGNLTEEDKRIVKWALAATKLSEFERREVDTLSGGQRQRVWIAMALAQQTDLILL
FT                   DEPTTYLDLAHQLEILKLLYELNRNQKCTIVMVLHDLNLAARFSDYIIAIQKGDIIKYG
FT                   PPEEVMTPEVLRKTFNINADIVIEPKSNRPVCITYDIIDENECVQLKEREAVGI"
FT   misc_feature    366535..367098
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 192.9, E-value 5.4e-55"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    366556..366579
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    366868..366912
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        367278..369002
FT                   /transl_table=11
FT                   /locus_tag="CBO0314"
FT                   /product="putative ferrichrome ABC transporter,ATP-binding
FT                   protein"
FT                   /note="Similar to Clostridium perfringens probable ABC
FT                   transporter cpe2296 SWALL:Q8XI28 (EMBL:AP003193) (566 aa)
FT                   fasta scores: E(): 2.6e-72, 41.62 38d in 567 aa"
FT                   /db_xref="GOA:A5HYK7"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR011527"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR036640"
FT                   /db_xref="InterPro:IPR039421"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK7"
FT                   /protein_id="CAL81866.1"
FT                   /translation="MRTTLRIFIGARRYWIHLILALIAVIISTIAGFYNPWALRELTSI
FT                   ATEGSANFGGQSLRIGLMLLVATILQSAGSAISGYLNHHAALHYVADMRTELYSKLQHM
FT                   GLRYFNKSRTGDLTSRVINDVMEVEILLAHIIPDFVVNILTFIGVGILLFSINVKLAFI
FT                   SLVTIPFIIMITLWQSKHLSPIWKQNSMIRGELSGTVQDNFSGIKEIQIFNQQEREEKR
FT                   IKNLSIKHSKAYLKASFFFETTFPLLAFFTALGSVIVIIFGGFMVSRGEINIGDIVGFS
FT                   MYLSMFYGPIKSFSRLMEMAGNAVAGCKRVFEVMDEVSDVQEKVNAKKLPRVKGEVEFK
FT                   GISFSYNDEIKVLKNINLKVNPGETVAFVGATGVGKTTIASLLNRFYDPQSGSILMDGI
FT                   DIKDVTLKSLRDNISMVLQDTFLFNGTIYENIVYGWKEATRNQVVAASKAANAHNFIEN
FT                   LEDGYDTIIGERGVRLSGGQKQRISIARAILRNSPILILDEATSALDTRTEKEIQAALD
FT                   EISKDRTTIVIAHRLSTIYNADKIVVLEGAGIKETGTHDELIRSGGTYAMLYKSQVS"
FT   sig_peptide     367278..367413
FT                   /locus_tag="CBO0314"
FT                   /note="probabilty 0.734, with cleavage site probability
FT                   0.398 between residues 46 and 47"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(367320..367388,367449..367517,367668..367736,
FT                   367755..367808,368004..368072,368091..368150)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0314 by TMHMM2.0 at aa 15-37, 58-80, 131-153,
FT                   160-177,243-265 and 272-291"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    367329..368150
FT                   /note="Pfam match to entry PF00664 ABC_membrane, ABC
FT                   transporter transmembrane region, score 161.5, E-value
FT                   1.5e-45"
FT                   /inference="protein motif:Pfam:PF00664"
FT   misc_feature    368364..368918
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 212.6, E-value 6e-61"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    368385..368408
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    368697..368741
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        complement(369057..369437)
FT                   /transl_table=11
FT                   /locus_tag="CBO0315"
FT                   /product="putative iron dependent repressor"
FT                   /note="Similar to Escherichia coli, and Escherichia coli O6
FT                   transcriptional regulator MntR or b0817 or c0903
FT                   SWALL:MNTR_ECOLI (SWALL:P75787) (155 aa) fasta scores: E():
FT                   3.6e-07, 30 38d in 120 aa"
FT                   /db_xref="GOA:A5HYK8"
FT                   /db_xref="InterPro:IPR001367"
FT                   /db_xref="InterPro:IPR022687"
FT                   /db_xref="InterPro:IPR022689"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="InterPro:IPR036421"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK8"
FT                   /protein_id="CAL81867.1"
FT                   /translation="MEKLTFVMENYLEAIYELSEESNGVKMTRIAEKLGVTKASTNSAM
FT                   VTLAEKGLITNEKYKKIFLTPLGLKIARFTYKKHHIIKDFLIKTLNIDSSIADEDACAI
FT                   EHVISSDSVYAMQKFLSEHENK"
FT   misc_feature    complement(369075..369245)
FT                   /note="Pfam match to entry PF02742 Fe_dep_repr_C, Iron
FT                   dependent repressor, metal binding and dimerisation domain,
FT                   score 32.6, E-value 3.5e-08"
FT                   /inference="protein motif:Pfam:PF02742"
FT   misc_feature    complement(369249..369431)
FT                   /note="Pfam match to entry PF01325 Fe_dep_repress, Iron
FT                   dependent repressor, N-terminal DNA binding domain, score
FT                   45.9, E-value 9.2e-11"
FT                   /inference="protein motif:Pfam:PF01325"
FT   misc_binding    369858..369960
FT                   /gene="pbuX"
FT                   /locus_tag="CBO0316"
FT                   /bound_moiety="purine"
FT                   /note="Purine riboswitch"
FT   CDS_pept        370136..371437
FT                   /transl_table=11
FT                   /gene="pbuX"
FT                   /locus_tag="CBO0316"
FT                   /product="xanthine permease"
FT                   /note="Similar to Bacillus subtilis xanthine permease PbuX
FT                   or bsu22060 SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta
FT                   scores: E(): 1e-52, 37.77 38d in 405 aa"
FT                   /db_xref="GOA:A5HYK9"
FT                   /db_xref="InterPro:IPR006042"
FT                   /db_xref="InterPro:IPR006043"
FT                   /db_xref="InterPro:IPR017588"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYK9"
FT                   /protein_id="CAL81868.1"
FT                   /translation="MKKNEMDIQLMYGVNDKPQILMQILLGLQHIFAAFGGIIVVPIVI
FT                   SAALGFDAQTSTALISSAILAAGVATFIQSRGIGPIGARVACIMGTDFTFVAPAIAVGG
FT                   KFGLSGIFGATILGAGIVIILSFFVKPLMKLFPPIVTGTVVSLIGLTLLPVSIDWAAGG
FT                   AGSANYGSLKNISIALFIMIVTLLLNHYGKGLVSSASILIGMIVGYIICIPLEMVDFSS
FT                   VSQASWVSLPKIFGYGITFNLQVLLPFIPAYFVTIIGTVGCLKAITEVSGIKADEKPIT
FT                   AGVLSDGVGSMLAGVFGALPNTSFSQNIGLIPLTKVASRYVTMMAGILLVILGLFPKFA
FT                   ALINIMPQPVLGGVGIVMFGTVAAAGIQTLSSVKLNNRNMLIIATSIGLGLGVTFRPEF
FT                   IAQLPESLKMIFSSGISTGTIVALLLNVILKEKE"
FT   misc_feature    370196..371332
FT                   /note="Pfam match to entry PF00860 xan_ur_permease,Permease
FT                   family, score 380.3, E-value 2.1e-111"
FT                   /inference="protein motif:Pfam:PF00860"
FT   misc_feature    order(370205..370273,370301..370354,370373..370441,
FT                   370451..370519,370538..370606,370634..370702,
FT                   370721..370789,370868..370936,370970..371038,
FT                   371096..371164,371183..371251,371363..371422)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0316 by TMHMM2.0 at aa 24-46, 56-73, 80-102,
FT                   106-128,135-157, 167-189, 196-218, 245-267, 279-301,
FT                   321-343,350-372 and 410-429"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    371171..371233
FT                   /note="PS01116 Xanthine/uracil permeases family signature."
FT                   /inference="protein motif:ProSite:PS01116"
FT   CDS_pept        371460..372032
FT                   /transl_table=11
FT                   /gene="xpt"
FT                   /locus_tag="CBO0317"
FT                   /product="xanthine phosphoribosyltransferase"
FT                   /EC_number="2.4.2.-"
FT                   /note="Similar to Bacillus subtilis xanthine
FT                   phosphoribosyltransferase Xpt or bsu22070 SWALL:XPT_BACSU
FT                   (SWALL:P42085) (194 aa) fasta scores: E(): 4.1e-32, 52.63
FT                   id in 190 aa"
FT                   /db_xref="GOA:A5HYL0"
FT                   /db_xref="InterPro:IPR000836"
FT                   /db_xref="InterPro:IPR010079"
FT                   /db_xref="InterPro:IPR029057"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYL0"
FT                   /protein_id="CAL81869.1"
FT                   /translation="MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNY
FT                   FKEHKITKVFTIESSGIAPAVMTAMQMNLPMVILKKQASKILNGDVYQTTVHSFTKGLD
FT                   YELTLSKKYIAKEDNILIIDDFLANGEAALGAARLVKEAGAKVAGMGIVIEKSFQPGRK
FT                   MLEDKGYDVYSLARIAKLQKGLIEFVK"
FT   misc_feature    371523..371996
FT                   /note="Pfam match to entry PF00156
FT                   Pribosyltran,Phosphoribosyl transferase domain, score 75.6,
FT                   E-value 1.1e-19"
FT                   /inference="protein motif:Pfam:PF00156"
FT   CDS_pept        372483..373175
FT                   /transl_table=11
FT                   /locus_tag="CBO0318"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Bacillus cereus two-component response
FT                   regulator bc4835 SWALL:Q816J5 (EMBL:AE017013) (231 aa)
FT                   fasta scores: E(): 7.7e-51, 60.08 38d in 228 aa"
FT                   /db_xref="GOA:A5HYL1"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL1"
FT                   /protein_id="CAL81870.1"
FT                   /translation="MNYKIYIIEDDLSISLLLKDYITKYGFDVKIAENFENIIEDFNEF
FT                   NPDVVLLDVNLPKYDGFYWCRRIRQKSKIPIIFISARDSGMDQVMALENGADDYIIKPF
FT                   YCDVIMAKIKSHIRRAFGEYAPKVDEKIVELQGLKFYKERSEIEFKDERVIITKKEGIL
FT                   LEYLMKKYPKVVNRDFLLEKIWDDIEFVEENTLNVNVSRIRKRLHKLGIEDGIETVRGV
FT                   GYRLNKTW"
FT   misc_feature    372489..372845
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 81.7, E-value 1.6e-21"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    372933..373160
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 81.7, E-value 1.6e-21"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        373188..374168
FT                   /transl_table=11
FT                   /locus_tag="CBO0319"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Bacillus cereus two component system
FT                   histidine kinase bc4836 SWALL:Q816J4 (EMBL:AE017013) (340
FT                   aa) fasta scores: E(): 4.2e-48, 41.53 38d in 325 aa"
FT                   /db_xref="GOA:A5HYL2"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL2"
FT                   /protein_id="CAL81871.1"
FT                   /translation="MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNT
FT                   FILGCFLFFRYYKNKEVYRFLDEGLNNLDESFLDLGNSVLGESISNILKKEHNLYEAEI
FT                   IKHNKVYNDHLTFINQWVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLNMAM
FT                   YFARLDSFQKDFIVEKFSLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMK
FT                   FVLEQLIVNGVKYSKDKGKELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGE
FT                   NGRNFGESTGMGLYIVKRICDSLEHNVFIESKVSEGTTVSIIFEK"
FT   misc_feature    order(373221..373289,373299..373358)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0319 by TMHMM2.0 at aa 12-34 and 38-57"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    373524..373700
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 23.0, E-value 0.00039"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    373833..374165
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score
FT                   96.2,E-value 6.6e-26"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        374344..375201
FT                   /transl_table=11
FT                   /gene="upk1"
FT                   /locus_tag="CBO0320"
FT                   /product="putative undecaprenol kinase"
FT                   /EC_number="2.7.1.66"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 putative undecaprenol kinase Upk or BacA or b3057
FT                   or z4410 or ecs3940 SWALL:UPK_ECOLI (SWALL:P31054) (273 aa)
FT                   fasta scores: E(): 4.5e-36, 42.18 38d in 275 aa"
FT                   /note="also similar to CBO0414 (51.056 38d)"
FT                   /db_xref="GOA:A5HYL3"
FT                   /db_xref="InterPro:IPR003824"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL3"
FT                   /protein_id="CAL81872.1"
FT                   /translation="MGIDIMFILKAIIIAVVEGLTEFIPVSSTGHMILVGSAINFNGDF
FT                   AKMFEVVIQLGAILAVVVRYWEKIKESIVEFFKFIFTKGKEGKTGFKFGVNVIVGSIPI
FT                   GITGLLFYHKIKSLFRPEAVIIGFIVGGILLLIIENMFRKKEHAVQDIDSITFAQALKV
FT                   GVLQILSVWPGMSRSASTIMGGWIAGISTPIAAEFSFFLAIPAMIGTSLKDLFEFDYSI
FT                   MTPTLWSALILGFVVAFIVSIIVMNKFVSYLKKKPMKVFAIYRVLAGLLLAALVFTKII
FT                   VLTV"
FT   misc_feature    374371..375159
FT                   /note="Pfam match to entry PF02673 BacA, Bacitracin
FT                   resistance protein BacA, score 332.8, E-value 4.1e-97"
FT                   /inference="protein motif:Pfam:PF02673"
FT   misc_feature    order(374377..374445,374488..374541,374614..374682,
FT                   374710..374769,374896..374964,375022..375090,
FT                   375124..375192)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0320 by TMHMM2.0 at aa 12-34, 49-66, 91-113,
FT                   123-142,185-207, 227-249 and 261-283"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        375216..375962
FT                   /transl_table=11
FT                   /locus_tag="CBO0321"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="Similar to Bacillus cereus ABC transporter
FT                   ATP-binding protein bc4839 SWALL:Q816J1 (EMBL:AE017013)
FT                   (250 aa) fasta scores: E(): 7.3e-58, 68.16 38d in 245 aa"
FT                   /db_xref="GOA:A5HYL4"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL4"
FT                   /protein_id="CAL81873.1"
FT                   /translation="MEILKVSNLKKVYGKKIIFTALNNISFNIDEGEFVGIMGPSGSGK
FT                   TTLLNMISTVDKPTSGQITIKDKNPLTLKGEDLALFRRRELGFVFQDFNLLDTLTIGEN
FT                   IVLPLTLDGISIKEQDEKLNIVSKILGIENLLEKRTFEVSGGQSQRTAIARALIHDPSL
FT                   LLADEPTGNLDSKASKTVMELFEKINKEEKVTTMMVTHDPLAASYCNRILFIKDGVIYN
FT                   EIYKGESRQQFYQEIIDLLALLGGAN"
FT   misc_feature    375309..375869
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 199.7, E-value 4.9e-57"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    375330..375353
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        375962..377824
FT                   /transl_table=11
FT                   /locus_tag="CBO0322"
FT                   /product="ABC transporter, permease protein"
FT                   /note="Similar to Bacillus cereus ABC transporter permease
FT                   protein bc1995 SWALL:Q81EI1 (EMBL:AE017004) (626 aa) fasta
FT                   scores: E(): 2e-63, 34.07 38d in 628 aa"
FT                   /db_xref="GOA:A5HYL5"
FT                   /db_xref="InterPro:IPR003838"
FT                   /db_xref="InterPro:IPR027022"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL5"
FT                   /protein_id="CAL81874.1"
FT                   /translation="MNFREFSTKNVVRNIRAYFAYLLSSTISAALLFSFTMLVLHPNLD
FT                   VTTFPIYLQKAFNITTIIAYLFLCLFIFYSVSVFIKSRFKEFGILYILGSSDKQIKKMI
FT                   AIENVLISSLSGIFGVILGLVFSKIFLILSGRLLGYNALRFYLPVKAIIITFLAFVLMG
FT                   ILISIFTTYMIKEDEVLNLLKGTQKPKSEPKTSNIIAILCVVLLLGGYYFSITSTMNNI
FT                   AYRIIPVTVVVIIGTYLLFSQLSVFVIKILKKNREFYMNKTKVLWISTLLYRIKDNTRM
FT                   FFLITITSAMAFTSIGAVSAFWINKEAEVDKNFPQAFFYASYKKDYNELDFIEGSLKKE
FT                   GYNYTKIQGHIKSLVSKKNTIPINIINESTYNSIAESLGQEKIHIKSNEAIAGTPLMGN
FT                   KRDNILVDNMDIKVITTLEERIIPALYDYVYIVKDDVYDKISGSTSSFYAFNVESYKDT
FT                   LNICKNYEAKFGESNNKKDHIILMKANILESHKIGYGVIMFLTIFIGIIFFVTTGSFLY
FT                   NKYYMDVQQDRMKYEQLNKIGITFKEIKKVSTIEIGVLFLFPYIVSVIHSLFALSALKN
FT                   AFEMDVNLVAFFVMGSFFIIQIIYFFIIRWNYLLDIKKSLANRI"
FT   sig_peptide     375962..376133
FT                   /locus_tag="CBO0322"
FT                   /note="probabilty 0.836, with cleavage site probability
FT                   0.425 between residues 58 and 59"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(376016..376084,376127..376195,376289..376357,
FT                   376415..376483,376544..376612,376640..376708,
FT                   376805..376873,377447..377515,377615..377683,
FT                   377711..377779)
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0322 by TMHMM2.0 at aa 19-41, 56-78, 110-132,
FT                   152-174,195-217, 227-249, 282-304, 496-518, 552-574 and
FT                   584-606"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    376118..376498
FT                   /note="Pfam match to entry PF02687 FtsX, Predicted
FT                   permease, score 44.6, E-value 2.3e-10"
FT                   /inference="protein motif:Pfam:PF02687"
FT   CDS_pept        377848..377994
FT                   /transl_table=11
FT                   /locus_tag="CBO0323"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL6"
FT                   /protein_id="CAL81875.1"
FT                   /translation="MGNKEILYSLDENLRIQYNMRAFKDYIKLNEERQIVMDSIKKDGK
FT                   VYS"
FT   CDS_pept        378321..378677
FT                   /transl_table=11
FT                   /locus_tag="CBO0324"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved
FT                   protein,putative murein hydrolase exporter ctc01825
FT                   SWALL:Q893J3 (EMBL:AE015942) (117 aa) fasta scores: E():
FT                   1.9e-30,67.52 38d in 117 aa"
FT                   /db_xref="GOA:A5HYL7"
FT                   /db_xref="InterPro:IPR005538"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL7"
FT                   /protein_id="CAL81876.1"
FT                   /translation="MRLLRQLGIILLICLLGEAIHDFFKLPIPGNVIGMILLFLCLSLG
FT                   IIKLTKINYISKFLLDHLAFFFVPAGVGILSCMPMLKGKWLAFLGVCLITSIIIIVVTG
FT                   WTIQLYIKLTSKEV"
FT   misc_feature    378327..378656
FT                   /note="Pfam match to entry PF03788 LrgA, LrgA family,score
FT                   92.4, E-value 9.4e-25"
FT                   /inference="protein motif:Pfam:PF03788"
FT   misc_feature    order(378339..378392,378402..378461,378495..378563,
FT                   378573..378641)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0324 by TMHMM2.0 at aa 7-24, 28-47, 59-81 and 85-107"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        378680..379375
FT                   /transl_table=11
FT                   /locus_tag="CBO0325"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani murein hydrolase
FT                   export regulator ctc01826 SWALL:Q893J2 (EMBL:AE015942) (229
FT                   aa) fasta scores: E(): 1.6e-59, 72.92 38d in 229 aa"
FT                   /db_xref="GOA:A5HYL8"
FT                   /db_xref="InterPro:IPR007300"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL8"
FT                   /protein_id="CAL81877.1"
FT                   /translation="MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALI
FT                   VCILISFNIKLDNFNKGGNLISFFLGPATVALAVPLYKKINVIKKYAIPILLGVTVGCI
FT                   TAMISIFYISKAFGLTSELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGIMGA
FT                   VIAPIVCKIFKIKNNIAIGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFL
FT                   APIIIKFLH"
FT   misc_feature    order(378692..378760,378773..378841,378869..378925,
FT                   378950..379018,379118..379186,379292..379360)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0325 by TMHMM2.0 at aa 5-27, 32-54, 64-82,
FT                   91-113,147-169 and 205-227"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    378695..379372
FT                   /note="Pfam match to entry PF04172 LrgB, LrgB-like
FT                   family,score 317.4, E-value 1.8e-92"
FT                   /inference="protein motif:Pfam:PF04172"
FT   CDS_pept        379671..380321
FT                   /transl_table=11
FT                   /locus_tag="CBO0326"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   membrane protein, cf-20 family cac0208 SWALL:Q97MI8
FT                   (EMBL:AE007534) (213 aa) fasta scores: E(): 2.4e-19,35.04
FT                   38d in 214 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYL9"
FT                   /protein_id="CAL81878.1"
FT                   /translation="MKKAKKSLILSLVLLFIPIMVMGCSSKPKVSADETAKILFDFYIK
FT                   GDQESLSKIKISKDQIEEISKMQKDKTISTIKTNLATAGLKVNDEQIKQIYAARVSALK
FT                   KLSAKAEVVSQDDKSAQVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNKATD
FT                   IYIKNLIKSYENVKPSSDMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK"
FT   sig_peptide     379671..379764
FT                   /locus_tag="CBO0326"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.999 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    379710..379742
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        380726..381133
FT                   /transl_table=11
FT                   /locus_tag="CBO0327"
FT                   /product="radical SAM superfamily protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein cac3492 SWALL:Q97DI5
FT                   (EMBL:AE007846) (290 aa) fasta scores: E(): 2.2e-20,54.63
FT                   38d in 108 aa"
FT                   /db_xref="GOA:A5HYM0"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="InterPro:IPR040086"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM0"
FT                   /protein_id="CAL81879.1"
FT                   /translation="MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSEC
FT                   YGIENFDKVRAKKNAIQIIKNELRKKRKKGVIGTGAMSDPYNHLERELMLTRMALEEIN
FT                   TLNFGAAIATKSNLIVRDIDILKKLRLIHLH"
FT   misc_feature    380801..381130
FT                   /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM
FT                   superfamily, score 22.8, E-value 4.5e-06"
FT                   /inference="protein motif:Pfam:PF04055"
FT   CDS_pept        381166..381618
FT                   /transl_table=11
FT                   /locus_tag="CBO0328"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to the C-terminal region of Clostridium
FT                   acetobutylicum uncharacterized conserved protein cac3492
FT                   SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E():
FT                   3.4e-15, 41.04 38d in 134 aa"
FT                   /db_xref="GOA:A5HYM1"
FT                   /db_xref="InterPro:IPR040086"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM1"
FT                   /protein_id="CAL81880.1"
FT                   /translation="MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGE
FT                   NIVKIVKKAHECGAKFIFAYGMGLTLRGNQREYFYRKLIREFPKENMVVKYKNAFGNKY
FT                   ECASLNHKKLWSIFKNECEKLGILYKMEDIILAYKDNYGNNQLSWF"
FT   CDS_pept        381753..383261
FT                   /transl_table=11
FT                   /locus_tag="CBO0329"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani ATP-dependent Zn
FT                   protease ctc00401 SWALL:Q898P3 (EMBL:AE015937) (509 aa)
FT                   fasta scores: E(): 1.3e-177, 88.84 38d in 502 aa"
FT                   /db_xref="InterPro:IPR014999"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM2"
FT                   /protein_id="CAL81881.1"
FT                   /translation="MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRV
FT                   LPGFDENAKIKLLHKLKEKVEIIICLYAGDIERNKIRGDFGITYDVDVLRLIDDLRGYD
FT                   LEVNSVVITRYSGQPATNIFINKLERRGIKVYKHEATKGYPTDVDTIVSDEGYGKNPYI
FT                   ETTKPIVVVTAPGPGSGKLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAY
FT                   ESATVDLKDVNMIDSFHFDAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMG
FT                   VNRVGFGIVDDEIVKEASKQEIIRRAFKTACEYKKGYVDKETFHRAKLIMEEMNLKEED
FT                   RKVVIPAREYAAKLKERANKSETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHY
FT                   ANISDEIHLISPVILEPIINLKAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKL
FT                   PMLKGCQAHSTTILSTNEEQTFRKLGIDVTCDPEYISESLYYNN"
FT   CDS_pept        383585..384136
FT                   /transl_table=11
FT                   /locus_tag="CBO0330"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1563 SWALL:Q8XK40 (EMBL:AP003191) (188 aa) fasta
FT                   scores: E(): 3.1e-37, 53.4 38d in 176 aa"
FT                   /db_xref="GOA:A5HYM3"
FT                   /db_xref="InterPro:IPR035168"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM3"
FT                   /protein_id="CAL81882.1"
FT                   /translation="MLETIILALIMAKLKGYEIKPLFKSWHIYPVVTIELIYIIIQINI
FT                   FLENYSLIRYAKILEAIYICSYLFIIIKYEQYTSAIIGAIFILIGSMSNKIAIGVNNGR
FT                   MPVFPTLSYFTGYAKPYSFVKVNDIHILGGSSTKFKFLTDIIDVGYSIMSIGDIFIRLF
FT                   VFIVIFNTIKHINNIKYIKI"
FT   misc_feature    order(383657..383725,383738..383797,383816..383884,
FT                   384032..384100)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0330 by TMHMM2.0 at aa 25-47, 52-71, 78-100 and 150-172"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        384315..384782
FT                   /transl_table=11
FT                   /locus_tag="CBO0331"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta
FT                   scores: E(): 1.6e-23, 40.52 38d in 153 aa"
FT                   /note="Also similar to CBO0335 (34.4 38d) and CBO0337 (42.6
FT                   38d)."
FT                   /db_xref="GOA:A5HYM4"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM4"
FT                   /protein_id="CAL81883.1"
FT                   /translation="MLKLSIVEFVARATPEAFLLIFAVYTFSNTKMNKKNYLLSSFLML
FT                   IMIFIIRSLPISYGIHTILSIMVLILLSYIINRIDVIRAVKSTIVTIILQLICEGTNIF
FT                   IIQYILKKNMNHIFRDPNLKTIYGIPSLIIFACIIVLRYIRLLKRKELQYD"
FT   misc_feature    order(384342..384401,384420..384473,384483..384542,
FT                   384576..384644,384687..384746)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0331 by TMHMM2.0 at aa 10-29, 36-53, 57-76, 88-110 and
FT                   125-144"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        384775..385464
FT                   /transl_table=11
FT                   /locus_tag="CBO0332"
FT                   /product="putative accessory gene regulator protein B"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta
FT                   scores: E(): 1.3e-33, 44.39 38d in 214 aa"
FT                   /db_xref="GOA:A5HYM5"
FT                   /db_xref="InterPro:IPR006741"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM5"
FT                   /protein_id="CAL81884.1"
FT                   /translation="MINTETISNNIAKKIASELNLDNDKKEVIAYGTFALFQTIFSIFL
FT                   IIIFGYLFNVQIEALMISFTISILRKSSGGVHATSPNNCAIIGTIICVGFAIIVVFLTS
FT                   SLINLNILLFLGVIIFVWSYYIIYKLAPVDSKAKPIQKSKRVKKLKKSSIITLSVYLVI
FT                   ILINFILYYKMMNKKYIIYSLCVYSGIVWQTFTLTRYGHLVVKKLDDFLNYMVDIKKGD
FT                   KSHEKIK"
FT   misc_feature    order(384865..384933,385027..385095,385099..385158,
FT                   385231..385290,385309..385377)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0332 by TMHMM2.0 at aa 31-53, 85-107, 109-128, 153-172
FT                   and 179-201"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        385448..385582
FT                   /transl_table=11
FT                   /locus_tag="CBO0332A"
FT                   /product="putative autoinducer prepeptide"
FT                   /note="No significant database matches"
FT                   /db_xref="InterPro:IPR009229"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM6"
FT                   /protein_id="CAL81885.1"
FT                   /translation="MKKLNKKVLMLVATFTTLLASIVASSACYWCVYQPKEPKCLREE"
FT   CDS_pept        385654..387357
FT                   /transl_table=11
FT                   /locus_tag="CBO0333"
FT                   /product="putative signaling protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1560 SWALL:Q8XK43 (EMBL:AP003191) (563 aa) fasta
FT                   scores: E(): 3.2e-129, 61.02 38d in 567 aa"
FT                   /db_xref="GOA:A5HYM7"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="InterPro:IPR003607"
FT                   /db_xref="InterPro:IPR006674"
FT                   /db_xref="InterPro:IPR029787"
FT                   /db_xref="InterPro:IPR037522"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM7"
FT                   /protein_id="CAL81886.1"
FT                   /translation="MNDVGNNKRNQINNIVSVVKLCSLLFSAIAIFKCFFSGNNKALDY
FT                   KNNMSAIHIISTTILIFSLIYCIWVFLTTNKFRGRYNKRIYFIENIVLILLFFVVVLGT
FT                   GTYASQYKFLFLFMIIITTIQSGMKYGIIIACLASFIILIMDIVCAPNLVVNEYFEQDL
FT                   ILAGVFILTAWPLGFYVKVENEHIEKLESLVNKDGLTDVYNHRFFHDALSKEVIECEEK
FT                   NEALSMIFIDIDYFKHYNDLYGHQKGDQVLKTIGEILKNNTRKEDIVARYGGEEFAVLL
FT                   PNTSEQDAINIAEKIRKKIEYTYFEGEENQPNGNLTVSMGISVYPYKAKSDMELIKSAD
FT                   DALYRAKFFNKNRVEAYTSILDELKNDIDEEHIDLVTSIKTLISVINAKDRYTYGHVER
FT                   VVLYSRLLADKLKLSEEDKKNFIYGAYMHDIGKINISREILNKKMPLAKEEWEILKQHP
FT                   VNGVEIIKPVSSLQNISDLILHHHERYDGKGYPDKLKGDNIPFLARALTVVDSFDAMTS
FT                   NRPYNRRKTYEEAIEELKRCSGTQFDSYIAEKFIEVIIENKDSFDDLSLL"
FT   misc_feature    order(385687..385746,385804..385872,385909..385977,
FT                   386035..386103,386140..386193)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0333 by TMHMM2.0 at aa 12-31, 51-73, 86-108, 128-150 and
FT                   163-180"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    386221..386712
FT                   /note="Pfam match to entry PF00990 GGDEF, GGDEF
FT                   domain,score 198.8, E-value 9e-57"
FT                   /inference="protein motif:Pfam:PF00990"
FT   misc_feature    386830..387198
FT                   /note="Pfam match to entry PF01966 HD, HD domain, score
FT                   102.2, E-value 1.1e-27"
FT                   /inference="protein motif:Pfam:PF01966"
FT   CDS_pept        387588..388097
FT                   /transl_table=11
FT                   /locus_tag="CBO0334"
FT                   /product="GnaT-family acetyltransferase"
FT                   /note="Similar to Bacillus anthracis acetyltransferase,GnaT
FT                   family ba3530 SWALL:Q81YL2 (EMBL:AE017035) (179 aa) fasta
FT                   scores: E(): 3e-05, 25.94 38d in 158 aa"
FT                   /db_xref="GOA:A5HYM8"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM8"
FT                   /protein_id="CAL81887.1"
FT                   /translation="MEDNNVELRQEVFKSDAAIIANWLEDTEITQYLNEKQNVSKSIKD
FT                   IMYRVNMPILTHLFNKNGSFFMVTTSEKEPVGFLRLVPKNNVTEMVIVIGDKDKWGKGL
FT                   GTNAILEGLKHAFFQWRADEVVAKINFKNQRSRRVFRKIGFTEDKELAKEMQYSMSIKE
FT                   FLELVA"
FT   misc_feature    387786..388025
FT                   /note="Pfam match to entry PF00583
FT                   Acetyltransf,Acetyltransferase (GNAT) family, score 45.1,
FT                   E-value 1.6e-10"
FT                   /inference="protein motif:Pfam:PF00583"
FT   CDS_pept        388494..388946
FT                   /transl_table=11
FT                   /locus_tag="CBO0335"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta
FT                   scores: E(): 6.5e-10, 28.77 38d in 139 aa"
FT                   /note="Also similar to CBO0331 (34.4 38d) and CBO0337 (33.1
FT                   38d)."
FT                   /db_xref="GOA:A5HYM9"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYM9"
FT                   /protein_id="CAL81888.1"
FT                   /translation="MFKLSILEFFLIAIPESFIFTIGIYFLSKRFFDKKRLIIMSLLSA
FT                   VEIYWVRMLPIHFGVHIGINIIFLILLSVNIGKISIKDAISYNMVMMIILSTSEFIGIF
FT                   VLYNVFKINMSLIKPRSLIKIIYFIPSFTLFVFSVFTMNKFINREE"
FT   misc_feature    order(388506..388574,388635..388703,388746..388814,
FT                   388851..388919)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0335 by TMHMM2.0 at aa 5-27, 48-70, 85-107 and 120-142"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        388973..390820
FT                   /transl_table=11
FT                   /locus_tag="CBO0336"
FT                   /product="two-component sensor histidine kinase"
FT                   /note="Similar to Clostridium acetobutylicum sensory
FT                   transduction histidine kinase cac0903 SWALL:Q97KL4
FT                   (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id
FT                   in 610 aa"
FT                   /db_xref="GOA:A5HYN0"
FT                   /db_xref="InterPro:IPR000014"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR035965"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN0"
FT                   /protein_id="CAL81889.1"
FT                   /translation="MNLDKIEIRNWSHDKKIYNSMLIVKFIILLFCGGAIYLDYAEKNN
FT                   KNISQNFYCNALNLVIIIICLVSVYFIWMFISIKAFKFERIKTIQVIENTISIVIFTFI
FT                   IMMSGSYKSSYKFLFLVAIITATIQLGMKHGIITSLVSSIIILAIDLILAPKAPVNIYF
FT                   ETDLILVGVFIMTAWPLGYYVNIQKEDLRQKEEEVNILANKLDQKEMQKRCMEQLLIKN
FT                   ENCYNLLIRNSKDAILVHRYGKIIFANERLKQMLGYKKEYNFEDIDIKSLIPKDEYNTV
FT                   KNKLENLYYGSENVVNFQHNVINNKEKTIQNTSTYVIYDGMPTIFSILHDVTSKIQVEK
FT                   LEQDVKKNIELLNESREYNKLITEFLSNISHELKTPLNVIFTAVQLLDFYEKDVDYEKQ
FT                   DKYLKLIKQNCYRLMKLINNLLDTTKLDSGYLRLNLVNYNIVSLIEEITLSVTSYAESK
FT                   GINIIFDTEMEERVIAVDTDKIERIILNLLSNAIKFTNPGGNIFVNIKDSEENVYVHIK
FT                   DTGVGIPSDKLESIFERFFQIDKTLKKNKEGTGIGLHLVKSFVEMHNGKVTINSELGKG
FT                   TEFIIKLPAIVCEEQIKSKNVVYEANIERINMEFSDITQ"
FT   misc_feature    order(389033..389095,389138..389206,389243..389302,
FT                   389375..389434,389471..389530)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0336 by TMHMM2.0 at aa 21-41, 56-78, 91-110, 135-154 and
FT                   167-186"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    390053..390259
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 65.9, E-value 9.2e-17"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    390395..390730
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 142.0,
FT                   E-value 1.1e-39"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        391046..391513
FT                   /transl_table=11
FT                   /locus_tag="CBO0337"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta
FT                   scores: E(): 4.2e-18, 39.07 38d in 151 aa"
FT                   /note="Also similar to CBO0331 (42. 38d) and CBO0335 (33.1
FT                   38d)."
FT                   /db_xref="GOA:A5HYN1"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN1"
FT                   /protein_id="CAL81890.1"
FT                   /translation="MLKSSVVELLMRLTPEAFLFIFIIQAFSNSKINKNKYVLSSILFS
FT                   VIIYSIRLLPIHYGVHTILNIIAIILICTFINQVAPIKAITYSLILVSFLALSEALNLY
FT                   FIYKIFGKNIENILKSPFKKCIYLMPSIIVLVIIVLLIFKIKDRRVKDVFD"
FT   misc_feature    order(391082..391135,391154..391213,391223..391291,
FT                   391310..391378,391421..391474)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0337 by TMHMM2.0 at aa 13-30, 37-56, 60-82, 89-111 and
FT                   126-143"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        391500..392129
FT                   /transl_table=11
FT                   /locus_tag="CBO0338"
FT                   /product="putative accessory gene regulator protein B"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta
FT                   scores: E(): 8.7e-24, 35.92 38d in 206 aa"
FT                   /db_xref="GOA:A5HYN2"
FT                   /db_xref="InterPro:IPR006741"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN2"
FT                   /protein_id="CAL81891.1"
FT                   /translation="MFLIERLSNKIGNKIANNLELDKDTEEIIAYGAFSVLQTIWALLC
FT                   VVILGAMCNVLVESVIIALTAAAYRKYSGGIHANTPNKCAFLGAIIFVGFAFIVKNINI
FT                   SVNLFFVLIGILTFIYSYYAIYKFVPVDTKAKPIENEDEILKLRRYSFFIISILFFIEA
FT                   LLLLFYFKYKNEMLIYYGKCIIAGVLWQSFTLTPLAKRVFANIAME"
FT   misc_feature    order(391617..391685,391728..391796,391809..391877,
FT                   391950..392009,392028..392096)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0338 by TMHMM2.0 at aa 40-62, 77-99, 104-126, 151-170
FT                   and 177-199"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        392204..392338
FT                   /transl_table=11
FT                   /locus_tag="CBO0339"
FT                   /product="putative autoinducer prepeptide"
FT                   /note="No significant database matches"
FT                   /db_xref="InterPro:IPR009229"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN3"
FT                   /protein_id="CAL81892.1"
FT                   /translation="MKKQLKEKCTKVTAKLLKSVAYSTADSACHLGIYQPKEPKSLRK"
FT   CDS_pept        392421..394274
FT                   /transl_table=11
FT                   /locus_tag="CBO0340"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Clostridium acetobutylicum sensory
FT                   transduction histidine kinase cac0903 SWALL:Q97KL4
FT                   (EMBL:AE007605) (683 aa) fasta scores: E(): 1.1e-45,34.81
FT                   38d in 586 aa"
FT                   /db_xref="GOA:A5HYN4"
FT                   /db_xref="InterPro:IPR000014"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR035965"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN4"
FT                   /protein_id="CAL81893.1"
FT                   /translation="MSEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNS
FT                   YYNVLLPMILSLITSLIYLIWSFFTVKTRMFKNILFIQRIENIFFILIFTILIIMSGKY
FT                   NSHYKYLFLFIIITTTIQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDLILS
FT                   GVFILTAVSLGYYVKLGNESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLL
FT                   IENARDAIIIHRKDKIVFANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELV
FT                   YRNKRDIVCVEQVIQNNKRKKINVESISTYIIYNNKPAILSILRDITSQKQVEKLQKDV
FT                   EKNIELLNESREYNKLITDFLANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYI
FT                   KVIKQNCYRLMRLINNLLDTTKLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINI
FT                   IFDTDVEEKIMAVDPDKIERIVLNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGI
FT                   GIPRDKIENIFDRFVQVDKTLRRNKEGSGIGLYLVKSFVNMHEGTIDIQSEIGKGSEFI
FT                   INIPVKLVKEDLEKENNVFYSPSKEYVDMEFADIYSEVSSK"
FT   misc_feature    order(392454..392522,392565..392633,392658..392726,
FT                   392802..392861,392898..392951)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0340 by TMHMM2.0 at aa 19-41, 56-78, 87-109, 135-154 and
FT                   167-184"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    393486..393695
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 66.8, E-value 4.7e-17"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    393831..394166
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 150.8,
FT                   E-value 2.4e-42"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        394506..395372
FT                   /transl_table=11
FT                   /locus_tag="CBO0341"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1494 SWALL:Q8XKA6 (EMBL:AP003190) (277 aa) fasta
FT                   scores: E(): 1.7e-64, 73.63 38d in 220 aa"
FT                   /db_xref="GOA:A5HYN5"
FT                   /db_xref="InterPro:IPR011063"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR035107"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN5"
FT                   /protein_id="CAL81894.1"
FT                   /translation="MSGIAGKGCEVLVPFNERIPLKDIERSIVKKYRKHIWSKFVKAIK
FT                   EYNLVEDGDKIAVAVSGGKDSILMAKLFQELKKHGQINFEIEFISMDPGYHEDIRKLLI
FT                   DNCDYLNIPINLFDSDIFKVIDDIAKDYPCYMCARMRRGALYSKAQELGCNKLALGHHF
FT                   NDVIETILLNVLYAGNFKTMLPKFRSTNFEGLELIRPLYYIEEEYIQKFIQNSGIWPLN
FT                   CACMVAAGKIGNKRHEIKDLIKELKKNFKDVDKSIFMSSKNVNMEAILGWEKNKEKYSY
FT                   LDFYDED"
FT   misc_feature    394668..395309
FT                   /note="Pfam match to entry PF01171 ATP_bind3, PP-loop
FT                   family, score 37.3, E-value 2.8e-11"
FT                   /inference="protein motif:Pfam:PF01171"
FT   CDS_pept        complement(395496..396041)
FT                   /transl_table=11
FT                   /locus_tag="CBO0342"
FT                   /product="transcriptional regulator"
FT                   /note="Similar to Fusobacterium nucleatum transcriptional
FT                   regulator, MerR family fn1928 SWALL:Q8RHS0 (EMBL:AE010495)
FT                   (184 aa) fasta scores: E(): 2.5e-14, 36.06 38d in 183 aa"
FT                   /db_xref="GOA:A5HYN6"
FT                   /db_xref="InterPro:IPR001387"
FT                   /db_xref="InterPro:IPR010982"
FT                   /db_xref="InterPro:IPR011051"
FT                   /db_xref="InterPro:IPR013096"
FT                   /db_xref="InterPro:IPR014710"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN6"
FT                   /protein_id="CAL81895.1"
FT                   /translation="MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLA
FT                   ITSLKKIADALNVPITYFFKSPELHKFLVKKQEREVFELEGSSSKFIRLSGNFTERAME
FT                   SILVVIPAEKQHGHKFSHPGEEFIYVLEGAIIANIDGEDYFVNEGDSIHFPSTIPHILS
FT                   NPLKTDSKILTVVCPAIF"
FT   misc_feature    complement(395853..396017)
FT                   /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix,
FT                   score 63.7, E-value 4.1e-16"
FT                   /inference="protein motif:Pfam:PF01381"
FT   misc_feature    complement(395925..395990)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1816.000, SD 5.37 at aa 47-68, sequence
FT                   LTLKDLSEKTGLSISFLSQVEN"
FT   CDS_pept        396396..397802
FT                   /transl_table=11
FT                   /locus_tag="CBO0343"
FT                   /product="putative amino acid permease"
FT                   /note="Similar to Clostridium perfringens membrane-spanning
FT                   transporter protein cpe0166 SWALL:Q8XP02 (EMBL:AP003185)
FT                   (495 aa) fasta scores: E(): 1.3e-43,30.62 38d in 480 aa"
FT                   /db_xref="GOA:A5HYN7"
FT                   /db_xref="InterPro:IPR002293"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN7"
FT                   /protein_id="CAL81896.1"
FT                   /translation="MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLF
FT                   AFIFFLPSALICAELAATYPRDGGLYEWVKEAYGEKWGFMVSWLNWTAKLFWYSSFLTF
FT                   LIVNVSYTLGKPELAGNKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTVPAI
FT                   LLIVMAFVSVLVFGHKPASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEID
FT                   DAKKTFPKAILISAAIVGGLYVLGSIAITMILPVDKITASEGILAALGTVAANLGIGPW
FT                   FIRIIALGISLSVFGAIILYIASPIKMLFGSVKKGIFTEKFTKVNEHNIPVQAVILQAV
FT                   IVSIILLTTTLLPSVDAIYNVLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSK
FT                   NNRKAIFIANMVLIISVIGIVLSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNF
FT                   AKKTGFREEK"
FT   sig_peptide     396396..396576
FT                   /locus_tag="CBO0343"
FT                   /note="probabilty 0.789, with cleavage site probability
FT                   0.637 between residues 61 and 62"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(396408..396467,396495..396563,396678..396734,
FT                   396762..396815,396852..396920,396984..397052,
FT                   397089..397157,397236..397304,397383..397451,
FT                   397461..397529,397608..397667,397695..397763)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0343 by TMHMM2.0 at aa 5-24, 34-56, 95-113,
FT                   123-140,153-175, 197-219, 232-254, 281-303, 330-352,
FT                   356-378,405-424 and 434-456"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    396420..397799
FT                   /note="Pfam match to entry PF00324 aa_permeases, Amino acid
FT                   permease, score 32.1, E-value 6.9e-09"
FT                   /inference="protein motif:Pfam:PF00324"
FT   CDS_pept        397921..399003
FT                   /transl_table=11
FT                   /locus_tag="CBO0344"
FT                   /product="probable metallopeptidase"
FT                   /note="Similar to Clostridium perfringens probable proline
FT                   dipeptidase cpe2497 SWALL:Q8XHI6 (EMBL:AP003194) (358 aa)
FT                   fasta scores: E(): 1.7e-79, 56.11 38d in 360 aa"
FT                   /db_xref="GOA:A5HYN8"
FT                   /db_xref="InterPro:IPR000587"
FT                   /db_xref="InterPro:IPR000994"
FT                   /db_xref="InterPro:IPR029149"
FT                   /db_xref="InterPro:IPR036005"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN8"
FT                   /protein_id="CAL81897.1"
FT                   /translation="MNQERLNKVLEGMKEREIPQMLISDAPAIFYLTGKWIHTGERLIA
FT                   LYLNENGNHKLFINELFPVTEDLGVEKVWFNDNQDGVEIISKYVEKDKVMGVDKNWPAR
FT                   FLLRLMELQGGSKFVNGSIIIDRARMFKDEKEKELMRASSKANDAAMEKLYNLFKENQD
FT                   LSEKEVGERLAKIYSDLGAERFSFDPIVGYGANAADPHHENDGSKLKEGDCIVLDIGCV
FT                   KDSYCSDMTRVFFYKSVPEHSKKVYDTVVAANMAGIAAVKPGVRFCDIDKASRDVIEKA
FT                   GYGKYFTHRTGHSIGIEDHDLGDVSAVNTEEIKPGMIFSIEPGIYLPGEVGVRIEDLVL
FT                   VTEDGCEVLNKYSKELTIIE"
FT   misc_feature    398311..398991
FT                   /note="Pfam match to entry PF00557
FT                   Peptidase_M24,metallopeptidase family M24, score 160.6,
FT                   E-value 2.8e-45"
FT                   /inference="protein motif:Pfam:PF00557"
FT   CDS_pept        399431..402019
FT                   /transl_table=11
FT                   /gene="adhE"
FT                   /gene_synonym="aad"
FT                   /locus_tag="CBO0345"
FT                   /product="aldehyde-alcohol dehydrogenase [includes: alcohol
FT                   dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC
FT                   1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl
FT                   deactivase)]"
FT                   /EC_number="1.2.1.10"
FT                   /EC_number="1.1.1.1"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   aldehyde-alcohol dehydrogenase [includes: alcohol
FT                   dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC
FT                   1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl
FT                   deactivase)] AdhE or Aad or cap0162 SWALL:ADHE_CLOAB
FT                   (SWALL:P33744) (862 aa) fasta scores: E(): 2.6e-212,65.04
FT                   38d in 861 aa, and to Escherichia coli, and Escherichia
FT                   coli O157:H7 aldehyde-alcohol dehydrogenase [includes:
FT                   alcohol dehydrogenase; acetaldehyde dehydrogenase
FT                   [acetylating] (EC 1.2.1.10) (acdh); pyruvate-formate-lyase
FT                   deactivase (pfl deactivase)] AdhE or Ana or b1241 or z2016
FT                   or ecs1741 SWALL:ADHE_ECOLI (SWALL:P17547) (890 aa) fasta
FT                   scores: E(): 1.3e-201,62.44 38d in 860 aa"
FT                   /db_xref="GOA:A5HYN9"
FT                   /db_xref="InterPro:IPR001670"
FT                   /db_xref="InterPro:IPR012079"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="InterPro:IPR016161"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="InterPro:IPR016163"
FT                   /db_xref="InterPro:IPR018211"
FT                   /db_xref="InterPro:IPR034789"
FT                   /db_xref="InterPro:IPR039697"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYN9"
FT                   /protein_id="CAL81898.1"
FT                   /translation="MKITTTEELIRKIEKIKEAQKIYSTYSQDKVDKIFKAAAIAANKE
FT                   RIKLAKMAVEETGMGIVEDKVIKNHFASEYIYNKYKDEKTCGVIEKDEAFGLTKIAEPI
FT                   GVIAAIVPTTNPTSTAIFKALIALKTRNGIIFSPHPRAKKSTIMAAKIVLDAAVQAGAP
FT                   KEIIGWIDEPTLELSNAVMSNSNLVLATGGPGMVKAAYSSGKPAIGVGPGNVPAIIHET
FT                   ADIKMAVSSVVLSKTFDNGMICASEQSVIVMNSIYEEVKKEFVIRGAYVLNKEEIEKVK
FT                   KIILVNGNVNAKIVGQTPQKIGEMAGIQVPDWAKLLVGEVQSVELEEPFSHEKLSPVLA
FT                   MYKVKTYEEALTKAERLVELGGFGHTSSLYINTVKCKEEVEKFSNNMKTGRTIINMPSA
FT                   QGGIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLLNIKNVAERRENMLWFRVPEKV
FT                   YFKYGCLPIALKELKRMNKKKAFIVTDKVLYELGVAKKATDVLDEIGINYKVFFDVAPD
FT                   PTLETAKKGAKEMVDFNPDTIIAIGGGSAMDAAKIMWVMYEHPEVEFEDLAMRFMDIRK
FT                   RVYEFPHMGDKAMMISVATSAGTGSEVTPFAVITDEKTGVKYPLADYELTPDMAIVDAD
FT                   LMLNMPKGLTAASGIDALTHAVEAYVSVMASEYTDGLCLEAIKTIFEYLPKAYKEGAQD
FT                   IEAREKMAHASTIAGMAFANAFLGVCHSMAHKLGSMHHVPHGIANALLINETIKFNSED
FT                   MPRKQTAFPQYKYPNAKAKYANIADYLSLGGKTPEEKVELLIKAIDKLKAEVNIPTSIE
FT                   EAGVSKDKFFKTLDEMSEQAFDDQCTGANPRYPLISEIKEMYTNVFSTKK"
FT   misc_feature    400793..401980
FT                   /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing
FT                   alcohol dehydrogenase, score 697.2, E-value 8.1e-207"
FT                   /inference="protein motif:Pfam:PF00465"
FT   misc_feature    401318..401404
FT                   /note="PS00913 Iron-containing alcohol dehydrogenases
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00913"
FT   misc_feature    401582..401644
FT                   /note="PS00060 Iron-containing alcohol dehydrogenases
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00060"
FT   CDS_pept        402338..402625
FT                   /transl_table=11
FT                   /locus_tag="CBO0346"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   diverged chey-domain cac1602 SWALL:Q97IN8 (EMBL:AE007670)
FT                   (103 aa) fasta scores: E(): 6.3e-16, 47.87 38d in 94 aa"
FT                   /db_xref="InterPro:IPR016772"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP0"
FT                   /protein_id="CAL81899.1"
FT                   /translation="MSVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNT
FT                   DLVLILTDYVGHTVVESIKEQSKSQNTRIVYSRRAWTSIEKTLKNTIGEN"
FT   CDS_pept        402688..403278
FT                   /transl_table=11
FT                   /locus_tag="CBO0347"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00782 SWALL:Q897F6 (EMBL:AE015938) (202 aa) fasta
FT                   scores: E(): 1.9e-28, 41.45 38d in 193 aa"
FT                   /db_xref="InterPro:IPR024523"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP1"
FT                   /protein_id="CAL81900.1"
FT                   /translation="MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTL
FT                   STSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKCTTILYYHKEALNKVLYNKYNLEFL
FT                   KEIGYRDFSNEESFLFKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWK
FT                   VYNNIQKAKKQFTTYDISRTNMILEVLEKELNV"
FT   misc_feature    402748..402816
FT                   /note="1 probable transmembrane helix predicted for CBO0347
FT                   by TMHMM2.0 at aa 21-43"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(403564..404031)
FT                   /transl_table=11
FT                   /locus_tag="CBO0348"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac0449 SWALL:Q97LV5 (EMBL:AE007559) (156 aa) fasta
FT                   scores: E(): 1.5e-29, 56.66 38d in 150 aa"
FT                   /db_xref="InterPro:IPR021525"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP2"
FT                   /protein_id="CAL81901.1"
FT                   /translation="MVIYHDVGGAHSSCVAANIHVKNLPSNTVPSKEDLLKLPTFDKLT
FT                   KKDVGHLKFIGIDEFGHKVYTISVRYKPNIVIPALRDMYTELNGSGNDLILVSSQPFVN
FT                   TWMKIGGFTSRGLGIVPIGRPIVTYGTLKSYMGLVDLVEKVKKKIQLDVPM"
FT   CDS_pept        complement(404386..405396)
FT                   /transl_table=11
FT                   /locus_tag="CBO0349"
FT                   /product="putative carbohydrate-binding protein"
FT                   /note="Similar to Aspergillus oryzae fucose-specific lectin
FT                   FleA SWALL:Q8TGE0 (EMBL:AB072379) (310 aa) fasta scores:
FT                   E(): 0.00038, 23.27 38d in 275 aa, and to Clostridium
FT                   tetani putative sialidase ctc00453 SWALL:Q898J4
FT                   (EMBL:AE015937) (292 aa) fasta scores: E(): 1.4e-89, 71.95
FT                   38d in 271 aa"
FT                   /db_xref="InterPro:IPR007132"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP3"
FT                   /protein_id="CAL81902.1"
FT                   /translation="MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQNNYKNFRGENYD
FT                   FEDTEENIENRNIEKTEYEGLFRAWNPWTNLGGDITSGLGASSWAANRIDLFARGRGGE
FT                   LIHNWFDNGKWNYWENLGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTWSGF
FT                   ENLGGQLTSAPTICSWASNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAV
FT                   SWGPNRIDVFARGRNNTLIHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGR
FT                   NNRLMYKYWDGSRWSDWTFLQGYLTSEPVSVSRNSSSINVFAKGPRENVIERIYS"
FT   CDS_pept        405500..406027
FT                   /transl_table=11
FT                   /locus_tag="CBO0350"
FT                   /product="putative phosphatase"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1026 SWALL:Q8XLL5 (EMBL:AP003189) (185 aa) fasta
FT                   scores: E(): 3.9e-34, 54.7 38d in 170 aa"
FT                   /db_xref="GOA:A5HYP4"
FT                   /db_xref="InterPro:IPR000326"
FT                   /db_xref="InterPro:IPR036938"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP4"
FT                   /protein_id="CAL81903.1"
FT                   /translation="MNFIQNMDIYLLDFIHKSIANDFLDKIMIFITSIGNLGLIWIAIS
FT                   VLLLISKKYRRVGMLCIATLILSSLIGEVVLKNLVQRGRPFTAIEGINLLVKAPKSFSF
FT                   PSGHTASSFAVATVIGRKIKSFKLPIYILAFAIAFSRLYLYVHYPSDVLVGALIGIISA
FT                   NIILYIYNKQNF"
FT   misc_feature    order(405581..405649,405668..405727,405881..405934,
FT                   405953..406009)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0350 by TMHMM2.0 at aa 28-50, 57-76, 128-145 and
FT                   152-170"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    405623..406024
FT                   /note="Pfam match to entry PF01569 PAP2, PAP2
FT                   superfamily,score 102.2, E-value 1.1e-27"
FT                   /inference="protein motif:Pfam:PF01569"
FT   repeat_region   406051..406080
FT                   /rpt_family="CB.17"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="gaggatgtctcaaaatagccttaattttaa"
FT                   /inference="ab initio prediction:REPuter"
FT   repeat_region   406092..406122
FT                   /rpt_family="CB.140"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="ttaaaattaaggctatttttattttgagaca"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        406438..407250
FT                   /transl_table=11
FT                   /locus_tag="CBO0351"
FT                   /product="probable polysaccharide deacetylase"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   xylanase/chitin deacetylase cac2396 SWALL:Q97GH1
FT                   (EMBL:AE007739) (280 aa) fasta scores: E(): 3.1e-34, 45.6
FT                   id in 250 aa"
FT                   /db_xref="GOA:A5HYP5"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="InterPro:IPR011330"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP5"
FT                   /protein_id="CAL81904.1"
FT                   /translation="MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDN
FT                   SKMVIRQMDDKIVFSEYIKDKYDAKQVFEKDGKKIAFLTFDDGPSHLTNDILDILKEYR
FT                   IKATFFVVGNLAKENKNIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVI
FT                   KSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLI
FT                   QNIKNTIEGKNHVVVLMHDCGAKKTTVEALPDIIEHLISQGYEFKALK"
FT   sig_peptide     406438..406525
FT                   /locus_tag="CBO0351"
FT                   /note="probabilty 0.968, with cleavage site probability
FT                   0.480 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    406657..407043
FT                   /note="Pfam match to entry PF01522
FT                   Polysacc_deacet,Polysaccharide deacetylase, score 137.1,
FT                   E-value 3.3e-38"
FT                   /inference="protein motif:Pfam:PF01522"
FT   CDS_pept        407358..408044
FT                   /transl_table=11
FT                   /locus_tag="CBO0352"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Bacillus subtilis alkaline phosphatase
FT                   synthesis transcriptional regulatory protein PhoP or
FT                   bsu29110 SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta
FT                   scores: E(): 1.6e-34, 46.72 38d in 229 aa"
FT                   /db_xref="GOA:A5HYP6"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP6"
FT                   /protein_id="CAL81905.1"
FT                   /translation="MDKILIVEDESSIRGFVKVNLKMNNFDVIEAETGEEGIEKARKHK
FT                   PDVVVLDIMLPGVDGLEVCKTLRQEFPNMGIIMLTAKSQDTDKVSGLEYGADDYIIKPF
FT                   NPLELTLRIKAILRRVNAVKESDDNIITGGPFKIDLYSKKIYKNEEEIDITPTEYLLMK
FT                   IFIENPGKAFNRDELLDLVWGYDFMGDSKIVDVNIRRLRSKIEETPSEPKFIKTVWGTG
FT                   YRWQNT"
FT   misc_feature    407361..407720
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 151.7, E-value 1.3e-42"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    407802..408032
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 90.6, E-value 3.3e-24"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        408054..409448
FT                   /transl_table=11
FT                   /locus_tag="CBO0353"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Clostridium tetani alkaline phosphatase
FT                   synthesis sensor protein phor or ctc01951 SWALL:Q892Y2
FT                   (EMBL:AE015942) (471 aa) fasta scores: E(): 9.7e-94,56.86
FT                   38d in 459 aa"
FT                   /db_xref="GOA:A5HYP7"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR029151"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP7"
FT                   /protein_id="CAL81906.1"
FT                   /translation="MSKISVKRRLMVNFILIIIISVFILEFLLILFTRHYYYNNLEDAI
FT                   SNQIKTSAEFYNKYFSNSPLEDNVLDNVDVFWRQTSAQVQIIDTKGKVLMDSIGVSNKS
FT                   QIKTSDIQKALKGEKGVWIGKIDYDTSGVMAVTYPLKSDNQIVGVLRFITSLRYVNSDI
FT                   ARISLGFLLIGLVVILISGLVSLFLANSITEPIKELTYVANKMASGNFKIKSEKMFDDE
FT                   FGELSDTLNYMADEIVKKDQLKNEFISSVSHELRTPLTSIKGWAITLNSNEVDKEILKD
FT                   GLKIIEDESERLSGMVEELLDFSKFVSGKMKLNKEEISICEIIDTVRKQLEPYAYRNRI
FT                   NFKATCINKLPNIYGDRNRIKQVLINLLDNAFKFTPEGGLVELNTKYEEEYITIVVKDT
FT                   GVGISKEDLPRVKEKFYKGNSGKSKNGIGLSICDEIIKLHNGVLHIESEENKGTTISIK
FT                   LPMIKL"
FT   misc_feature    order(408081..408149,408552..408620)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0353 by TMHMM2.0 at aa 10-32 and 167-189"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    408561..408770
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   64.2, E-value 2.8e-16"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    408780..408980
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 69.2, E-value 9.4e-18"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    409116..409439
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 137.7,
FT                   E-value 2.1e-38"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        409511..411001
FT                   /transl_table=11
FT                   /locus_tag="CBO0354"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc01950 SWALL:Q892Y3 (EMBL:AE015942) (509 aa) fasta
FT                   scores: E(): 4.1e-53, 35.15 38d in 512 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP8"
FT                   /protein_id="CAL81907.1"
FT                   /translation="MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTW
FT                   QFDFSNLDKDSKLRLRLKNKDVIINSKYIILGNEVCKSPDFKVKTVKTEEYFLYKLRLN
FT                   PNKLNLDKKEIEVISTSLDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEPKHN
FT                   IIEKNSQQDIVMPKRYTLLRTGVLIGLKSSEEDYVDGYKNEKKYRTIFISSRNRNLKNV
FT                   IETENLFVPRKDGFCEIGVNRINNLSNIQDNIFVNPLYNNYPIKNNFRLEQDIKNKSIY
FT                   RDILFVSNDYISIEYNDINKDKPIDLYKVKMLPIDNINAMAGVNIGDIIDKDSEKILAS
FT                   SLESCIRSKDKDILNKLERSCRKDSFFLSRRNGHWILKGRLNGIDDKEEYIDFNINTEI
FT                   PEKILNYDDLNLSWNSIKSKVPNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAI
FT                   YEMELNKETVVMAEWATADYAKKWTDSILKNKNAHIIK"
FT   sig_peptide     409511..409583
FT                   /locus_tag="CBO0354"
FT                   /note="probabilty 0.969, with cleavage site probability
FT                   0.491 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    409544..409576
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    410315..410380
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00179"
FT   CDS_pept        411045..411611
FT                   /transl_table=11
FT                   /locus_tag="CBO0355"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani putative rRNA
FT                   methylase ctc00455 SWALL:Q898J2 (EMBL:AE015937) (192 aa)
FT                   fasta scores: E(): 1.4e-32, 54.64 38d in 183 aa"
FT                   /db_xref="InterPro:IPR010719"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYP9"
FT                   /protein_id="CAL81908.1"
FT                   /translation="MSKEKFNNAVNIAKYICENTLKFGDIAVDCTLGKGHDTILLANLV
FT                   GNKGKVISFDIQKEAINKTREKLREFDYKNITLINDGHENLDKHIQEKVKLFIFNLGYL
FT                   PGKDHNITTKAETTLKALKKALKLLDDNGIVLLVIYYGHENGKEEKAALEKFTSELDQK
FT                   VYNVMKNSFINQANNPPLLICIEKR"
FT   CDS_pept        411637..412311
FT                   /transl_table=11
FT                   /locus_tag="CBO0356"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani membrane spanning
FT                   protein ctc01769 SWALL:Q893P4 (EMBL:AE015942) (220 aa)
FT                   fasta scores: E(): 4.7e-43, 51.61 38d in 217 aa"
FT                   /db_xref="GOA:A5HYQ0"
FT                   /db_xref="InterPro:IPR015414"
FT                   /db_xref="InterPro:IPR032816"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ0"
FT                   /protein_id="CAL81909.1"
FT                   /translation="MKNKKDLFKIIGLSLIIIIVAMFLLRHGHAIRRMNIKHTVRYIRS
FT                   CGKFSSICFLLIYALKPLVIIIPASMLSLVGGVLFGPVKGFILNMLGFFLSGSLAFWLS
FT                   RLLGKSFVDKILRGKAVELDNNIEKEGFKIIFLLRFPPIFPYDPISYASGLTKMKYKHF
FT                   VLGSLLGVIPETMCYSYMGKNVMNPLTSKFIVPVIVVILTTIIGIYVYKKSKINVVKDE
FT                   KL"
FT   sig_peptide     411637..411718
FT                   /locus_tag="CBO0356"
FT                   /note="probabilty 0.922, with cleavage site probability
FT                   0.405 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(411664..411720,411781..411849,411892..411960,
FT                   412123..412182,412210..412269)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0356 by TMHMM2.0 at aa 10-28, 49-71, 86-108, 163-182 and
FT                   192-211"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    411781..412224
FT                   /note="Pfam match to entry PF00597 DedA, DedA family,score
FT                   14.5, E-value 0.00051"
FT                   /inference="protein motif:Pfam:PF00597"
FT   CDS_pept        complement(412452..415139)
FT                   /transl_table=11
FT                   /locus_tag="CBO0357"
FT                   /product="putative signaling protein"
FT                   /note="Similar to Chromobacterium violaceum hypothetical
FT                   protein cv0542 SWALL:AAQ58219 (EMBL:AE016911) (633 aa)
FT                   fasta scores: E(): 2.3e-57, 35.07 38d in 536 aa"
FT                   /db_xref="GOA:A5HYQ1"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="InterPro:IPR001633"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR007892"
FT                   /db_xref="InterPro:IPR029787"
FT                   /db_xref="InterPro:IPR035919"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ1"
FT                   /protein_id="CAL81910.1"
FT                   /translation="MIIVKLYKKSLAIILLIFLVSIIITSILSKTYIMKKFNNIEIKYN
FT                   VYKTEHLLKLINKDIQNIYNLNKDYAMWDDTYKFINDKNDNYIQTILKGSSIFKKFNID
FT                   LILFVNKNNDVVFEQYYNKNEKLNKKDINYLSSIATSNKKNTHPIKGLTKFDDSLFLIT
FT                   SSPITDSLNSKTPNGAMIFIKFLPKENINKIYGNNTNFQIIDFKNLYPVIYKKNNIFMI
FT                   EHNDHLLESYGLIRDIFNNNTFMLKLNINRDIYFTAKENIKFFIFVIFILGIFMSILLI
FT                   KILNELVLKKVHSIEKTLNYVAETADLSVRLDTTGNDEITSLNKNFNNMFDMLETSKEK
FT                   IIENHKKYNYLFSSVITNFSYNKIIKNKDSDIVDFKVVEINNYFSELLNTDKENIIGEN
FT                   ISSFIPSILNENPILIKSIKKISSIGGKETLEEIYIEELRKWFSAVVYSMEVDYFALLL
FT                   TDITENKKDKEKILGLAYYDSLTGLSNRKKIIETINKTINNYENEKFAVLFIDLDHFKS
FT                   INDTLGHDVGDYVLEKVSARFKMLLSPKHKIGRLGGDEFIIVQNITSISDAEKLACKIC
FT                   TTLNHSIKYKEDDLFIGASIGISIYPEDGKDTSTLMKNADAAMYAAKKNGGYKYEVYSR
FT                   SMNERALDDLILENRLRRALEKNELLVYFQPIYHLKTSKIIAMESLVRWKFDNKIISPN
FT                   QFIPLAKNIGEIANIDNWVLNKACSQCNLWQKQNNKPLYVSVNISFKQMKDKNFVDNVL
FT                   NILRTTKLKPSYLCLEITEDEAMEDVDLSIKTLEALKRHGIKISLDDFGTGYSSLSYVT
FT                   KLPIDNIKIDKSIIKNIHKDNKSLQIVKSIILMSKSLDINIIAEGVETIEQLEILQELG
FT                   CDFIQGFYISEPLPIKTFQSKFIR"
FT   misc_feature    complement(412476..413213)
FT                   /note="Pfam match to entry PF00563 EAL, EAL domain, score
FT                   376.1, E-value 3.8e-110"
FT                   /inference="protein motif:Pfam:PF00563"
FT   misc_feature    complement(413253..413729)
FT                   /note="Pfam match to entry PF00990 GGDEF, GGDEF
FT                   domain,score 175.3, E-value 1e-49"
FT                   /inference="protein motif:Pfam:PF00990"
FT   misc_feature    complement(414132..414344)
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   44.2, E-value 3e-10"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    complement(order(414297..414350,415053..415112))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0357 by TMHMM2.0 at aa 10-29 and 264-281"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(414513..414983)
FT                   /note="Pfam match to entry PF05228 CHASE4, CHASE4
FT                   domain,score 66.4, E-value 6.5e-17"
FT                   /inference="protein motif:Pfam:PF05228"
FT   sig_peptide     complement(415049..415139)
FT                   /locus_tag="CBO0357"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.887 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(415330..416517)
FT                   /transl_table=11
FT                   /locus_tag="CBO0358"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc01330 SWALL:Q895E6 (EMBL:AE015940) (403 aa) fasta
FT                   scores: E(): 1.5e-80, 50 38d in 398 aa"
FT                   /db_xref="GOA:A5HYQ2"
FT                   /db_xref="InterPro:IPR024301"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ2"
FT                   /protein_id="CAL81911.1"
FT                   /translation="MNKRKKLILIITLCISITYLFLYNNNKTYVYTSLQEENSLDKDSV
FT                   KNSLEEIYKKRCEAFTSLDLKSLNDYFNTSHKYGEWALAHEIKRIKYLNDWSYNRGIKF
FT                   TNVASSLKYRKISPTKRGVRVSLDEIYKFDYEYKSDETPTKNSFGVSIQHTVDLIKKDD
FT                   KWIIFTDWYTDCFEDALKSYSADTDSLAKQTSPPKYNINSCSRNHEPNYEGKYNRIRAV
FT                   EYADKYCGIPWASGNDLRHNKKYKNFTGAGGDCTNYVSQVLGDKEAGSLPFDGAWYCRY
FT                   HKYGGGEGSKAWVNADAFRNYLIYSGKGNLIKKGSFEDLIKPNDNHACGVIEKLELGDM
FT                   ICYALGSNIDHFAVVTGWDSHGYPLVNSHTTNRYRVPWDLGWGDKNIFFHLIHIK"
FT   sig_peptide     complement(416424..416517)
FT                   /locus_tag="CBO0358"
FT                   /note="probabilty 0.857, with cleavage site probability
FT                   0.258 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        416770..418110
FT                   /transl_table=11
FT                   /locus_tag="CBO0359"
FT                   /product="putative drug/sodium antiporter"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   na+-driven multidrug efflux pump NorM2 or tte1811
FT                   SWALL:Q8R919 (EMBL:AE013133) (449 aa) fasta scores: E():
FT                   1.7e-69, 42.41 38d in 448 aa"
FT                   /db_xref="GOA:A5HYQ3"
FT                   /db_xref="InterPro:IPR002528"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ3"
FT                   /protein_id="CAL81912.1"
FT                   /translation="MTKRYPMKEILDTSIPIIAEMTLYNLMIVFDMMMIGNYGGNKCLT
FT                   AVGLSNGVIFTLCDVFISVGLAVSVTSLIARSIGSRHYKNAQQYSICGLFLGVIISFLI
FT                   SYFMFYKSEKILYIAGARGDILKIANVFNKTMAISIFFKMNTEIINSILRGYKNTKIPF
FT                   FTAVIISSCKIILDFIFIFGIGKNGLGVFGAALASILSQIVGFTFSFIYMLDKLKSHGN
FT                   INLFKLFKIDKIKDILNMYIPASLEEATYSVSRLLCAFMIIKIGSISFSANEIANTIET
FT                   VSIIPSAALGVSATTLVGMKIGEKDYRGAKEYANKSVWFAVSISLIFSLLFIFMPNLLV
FT                   GCFVGNKEKNVVKLATVCLLVGAIEQPFIAASTVVEDILKGMGDAKTPFIVTLISSWCI
FT                   RVPLFYYYIYKLKYSVVCVWWITAFQWFIDFLLMKIILKKKFNKFKL"
FT   misc_feature    order(416806..416874,416926..416994,417031..417099,
FT                   417142..417195,417256..417324,417337..417405,
FT                   417610..417678,417721..417789,417823..417891,
FT                   417934..417993,418012..418080)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CBO0359 by TMHMM2.0 at aa 13-35, 53-75, 88-110,
FT                   125-142,163-185, 190-212, 281-303, 318-340, 352-374,
FT                   389-408 and 415-437"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    416815..417306
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score
FT                   93.4,E-value 4.9e-25"
FT                   /inference="protein motif:Pfam:PF01554"
FT   misc_feature    417496..417987
FT                   /note="Pfam match to entry PF01554 MatE, MatE, score 127.2,
FT                   E-value 3.3e-35"
FT                   /inference="protein motif:Pfam:PF01554"
FT   CDS_pept        418302..418868
FT                   /transl_table=11
FT                   /locus_tag="CBO0360"
FT                   /product="putative metal dependent phosphohydrolase"
FT                   /note="Similar to Thermotoga maritima hypothetical protein
FT                   Tm1558 tm1558 SWALL:Q9X1P4 (EMBL:AE001801) (182 aa) fasta
FT                   scores: E(): 4.9e-25, 47.09 38d in 189 aa"
FT                   /db_xref="GOA:A5HYQ4"
FT                   /db_xref="InterPro:IPR003607"
FT                   /db_xref="InterPro:IPR006674"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ4"
FT                   /protein_id="CAL81913.1"
FT                   /translation="MFSREKAEELLLNNLKSEHLIKHSYAVEAVMRGLAKKLDPENIDK
FT                   WGITGLLHDLDADIVDYVQNPHLHGPKTVEILKAEGFGDEDMYNAICAHNQGSGTEIKS
FT                   KMDQAIYAADPITGFITAITLVYPDKKISSVKVKSITKRMKEKRFAAGANREAMKSIEK
FT                   LGIEFPQFAELSLNSMEEISQVLGL"
FT   misc_feature    418359..418658
FT                   /note="Pfam match to entry PF01966 HD, HD domain, score
FT                   26.1, E-value 8.6e-05"
FT                   /inference="protein motif:Pfam:PF01966"
FT   CDS_pept        419173..420447
FT                   /transl_table=11
FT                   /locus_tag="CBO0361"
FT                   /product="putative Na(+)/H(+) antiporter"
FT                   /note="Similar to Methanosarcina mazei putative Na(+)/H(+)
FT                   antiporter mm0294 SWALL:Q8Q044 (EMBL:AE013254) (596 aa)
FT                   fasta scores: E(): 2.4e-25, 30.64 38d in 385 aa"
FT                   /db_xref="GOA:A5HYQ5"
FT                   /db_xref="InterPro:IPR006153"
FT                   /db_xref="InterPro:IPR038770"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ5"
FT                   /protein_id="CAL81914.1"
FT                   /translation="MKMETNVILSANNILKLIALVILAGVVFGKISRKVNLPDVVLFIL
FT                   AGVILGPEVLNLINIDSYPVGNQLILTFGAAYILYDGGREIDLKVFNEVKISVLLLSTL
FT                   GVLISTGITGFFVYKIFHIDFIYALLLGAIISSTDPSVLVPLFKNMNVSNKLKQTIISE
FT                   SAFNDAAAAIVTFAILGVIAGGEFSLGKSIFELLKSSLGGILIGGIFGYISTKLIAGEK
FT                   YAFLKEFPSEVSIVAVIGTYLIADKLGVSGFMAVFIIGMVCGNKKRINCCIPDEYNQTH
FT                   LRFKEVLTIILRMMIFVLLGSHIDFGVLSKYFTKDLMVVALLIFVSRPVSAFLSVIFDR
FT                   KAKWNIKEIIYLMWVRETGVIPAALVGMLLTMHIKNSDIIASVTFITIIITLTFQASTS
FT                   KSLAKLLKLDLDEGKKEIAVDSIKI"
FT   misc_feature    order(419191..419259,419287..419346,419359..419415,
FT                   419458..419526,419545..419613,419671..419739,
FT                   419758..419826,419884..419952,420031..420099,
FT                   420127..420186,420220..420288,420301..420354)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0361 by TMHMM2.0 at aa 7-29, 39-58, 63-81,
FT                   96-118,125-147, 167-189, 196-218, 238-260, 287-309,
FT                   319-338,350-372 and 377-394"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    419212..420402
FT                   /note="Pfam match to entry PF00999
FT                   Na_H_Exchanger,Sodium/hydrogen exchanger family, score
FT                   214.1, E-value 2.2e-61"
FT                   /inference="protein motif:Pfam:PF00999"
FT   misc_feature    419725..419748
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    419944..420021
FT                   /note="PS00217 Sugar transport proteins signature 2."
FT                   /inference="protein motif:ProSite:PS00217"
FT   CDS_pept        complement(420582..421904)
FT                   /transl_table=11
FT                   /locus_tag="CBO0362"
FT                   /product="putative aminotransferase"
FT                   /note="Similar to Clostridium tetani putative
FT                   aminotransferase ctc01359 SWALL:Q895C0 (EMBL:AE015940) (440
FT                   aa) fasta scores: E(): 6.2e-91, 55.55 38d in 432 aa"
FT                   /db_xref="GOA:A5HYQ6"
FT                   /db_xref="InterPro:IPR000192"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="InterPro:IPR020578"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ6"
FT                   /protein_id="CAL81915.1"
FT                   /translation="MYSNKRSPYRYLVVGSDTKVPLYNGQLTPCINFDNAATTPPLASV
FT                   MNAIVNFSPWYSSIHRGTGYKSQLSSKIYEDSRKTVGKFIGADLDKDVIIYVKNTTEAI
FT                   NKLSYRLCSCDDDSIILTTSMEHHSNDLPWRDKYNVDYIEVDDCGRLVMEDLRSKLIRY
FT                   GDKVKLVTIAGASNVTGYINPIYDIAKLVHEFGCKILVDGAQLVPHCKLSMKPHDSLEH
FT                   IDYLAFSAHKMYAPFGIGVLIGPKETFERGDPDYKGGGTVNVVTKDYVLWTDPPEKDEA
FT                   GTPNVMGVIALAKAIDTMTGIGMKNIEIYEQDIFEYAFRKIAQIPDIKIYSCKNLDYPR
FT                   VAIIPFNISGMHHSITAEILSKEFGIAVRNGCFCAQPYVQKILNIPKEEIGSYANEPMN
FT                   KRPGMVRLSFGMYNDIYEIDFLVMALNKIVQNKNKYLEKYG"
FT   misc_feature    complement(420642..421790)
FT                   /note="Pfam match to entry PF00266
FT                   aminotran_5,Aminotransferase class-V, score -35.7, E-value
FT                   7e-08"
FT                   /inference="protein motif:Pfam:PF00266"
FT   misc_feature    complement(421179..421238)
FT                   /note="PS00595 Aminotransferases class-V
FT                   pyridoxal-phosphate attachment site."
FT                   /inference="protein motif:ProSite:PS00595"
FT   CDS_pept        422291..423301
FT                   /transl_table=11
FT                   /locus_tag="CBO0363"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani membrane spanning
FT                   protein, similar to vegetatible incompatibility protein
FT                   het-e-1 ctc01844 SWALL:Q893H9 (EMBL:AE015942) (345 aa)
FT                   fasta scores: E(): 2.1e-54, 46.66 38d in 345 aa"
FT                   /db_xref="GOA:A5HYQ7"
FT                   /db_xref="InterPro:IPR018383"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ7"
FT                   /protein_id="CAL81916.1"
FT                   /translation="MERLKTILPGILLSFFIAILATWLGNLLPVIGGAVFGIIIGIIIN
FT                   NIIGKPKNTIEGVAFTSKKVLQWAIIVLGAGLSLSQVRKTGLESLEVTIFTIATAFITA
FT                   YVVGKFFKIPDKLKTLIGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNIIAVL
FT                   IFPPLGHLLGFSDKAFGLWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPI
FT                   SLIFAFITAYKKKKEAEMGTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYIN
FT                   ELGKFLIVMALSAIGLSSNFKEMTKAGFKPILLGVIVWFNVAVVSIIIQFITGQI"
FT   sig_peptide     422291..422399
FT                   /locus_tag="CBO0363"
FT                   /note="probabilty 0.973, with cleavage site probability
FT                   0.550 between residues 37 and 38"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(422309..422365,422378..422437,422483..422536,
FT                   422564..422623,422648..422716,422729..422797,
FT                   422822..422890,422918..422986,423047..423106,
FT                   423119..423187,423224..423292)
FT                   /note="11 probable transmembrane helices predicted for
FT                   CBO0363 by TMHMM2.0 at aa 7-25, 30-49, 65-82,
FT                   92-111,120-142, 147-169, 178-200, 210-232, 253-272, 277-299
FT                   and 312-334"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    422315..423235
FT                   /note="Pfam match to entry PF03601 Cons_hypoth698,Conserved
FT                   hypothetical protein 698, score 344.6, E-value 1.1e-100"
FT                   /inference="protein motif:Pfam:PF03601"
FT   CDS_pept        423432..424106
FT                   /transl_table=11
FT                   /locus_tag="CBO0364"
FT                   /product="putative phosphatase"
FT                   /note="Similar to Clostridium tetani ser/thr and tyr
FT                   protein phosphatase ctc02044 SWALL:Q892P9 (EMBL:AE015943)
FT                   (208 aa) fasta scores: E(): 6e-36, 43.35 38d in 203 aa"
FT                   /db_xref="GOA:A5HYQ8"
FT                   /db_xref="InterPro:IPR026841"
FT                   /db_xref="InterPro:IPR036938"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ8"
FT                   /protein_id="CAL81917.1"
FT                   /translation="MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKS
FT                   MPFIPAFSVPYMVWYPFIIISLIYMCFKNRKLYYKSLSSIIISLITSYIIFFFFQTTVP
FT                   RPKVIGNDIFSDIVKFIYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINITVII
FT                   LGILIILSTQFIKQHVLLDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKS
FT                   EI"
FT   misc_feature    order(423453..423515,423573..423641,423660..423728,
FT                   423792..423860,423897..423956,423969..424037)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0364 by TMHMM2.0 at aa 13-33, 53-75, 82-104,
FT                   126-148,161-180 and 185-207"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    423618..424049
FT                   /note="Pfam match to entry PF01569 PAP2, PAP2
FT                   superfamily,score 0.9, E-value 0.0029"
FT                   /inference="protein motif:Pfam:PF01569"
FT   CDS_pept        424052..424750
FT                   /transl_table=11
FT                   /locus_tag="CBO0365"
FT                   /product="two-component response regulator"
FT                   /note="Similar to Enterococcus faecium regulatory protein
FT                   VanR vanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta
FT                   scores: E(): 2.2e-41, 51.94 38d in 231 aa"
FT                   /db_xref="GOA:A5HYQ9"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="InterPro:IPR011006"
FT                   /db_xref="InterPro:IPR016032"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR039420"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYQ9"
FT                   /protein_id="CAL81918.1"
FT                   /translation="MSAEKILIVDDEKEIRDLIDIYLTNEGYITLKASNGIEALELLKT
FT                   NNVHLIILDIMMPKMDGIEACMKIREEKSMPIIMLSAKSEDMDKIIGLTTGADDYITKP
FT                   FNPLELLARVKSQLRRYIKLNNSNGNENEDIVTIEDITINVATHEVKIGDQPVRLTPRE
FT                   FDILELLARNRGVVFSIEKIYELVWKEEFLDSNNTVMVHIRKLREKIEQNPRNPRYIKT
FT                   VWGVGYKVEK"
FT   misc_feature    424061..424417
FT                   /note="Pfam match to entry PF00072 response_reg, Response
FT                   regulator receiver domain, score 146.2, E-value 6e-41"
FT                   /inference="protein motif:Pfam:PF00072"
FT   misc_feature    424511..424741
FT                   /note="Pfam match to entry PF00486
FT                   trans_reg_C,Transcriptional regulatory protein, C terminal,
FT                   score 102.7, E-value 7.5e-28"
FT                   /inference="protein motif:Pfam:PF00486"
FT   CDS_pept        424776..426254
FT                   /transl_table=11
FT                   /locus_tag="CBO0366"
FT                   /product="two-component sensor kinase"
FT                   /note="Similar to Enterococcus faecalis VansE SWALL:Q93A42
FT                   (EMBL:AF430807) (357 aa) fasta scores: E(): 1.1e-25,32.16
FT                   38d in 370 aa"
FT                   /db_xref="GOA:A5HYR0"
FT                   /db_xref="InterPro:IPR003594"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR003661"
FT                   /db_xref="InterPro:IPR004358"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="InterPro:IPR036097"
FT                   /db_xref="InterPro:IPR036890"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR0"
FT                   /protein_id="CAL81919.1"
FT                   /translation="MKPFKYIYKLISYKVKKSLRLELIFTFGLCFLMAIMTFIITNSYL
FT                   TKASKYSEINYEKGINEIYNYSLSISNEINSEKLKIEDKDTIQELIDRHWSMDKNNKIF
FT                   IANTDGKILFKVENVEVEKVDIFEIIKNNIQLQNIKSYEYDYDVGRKEFVSINPLIFEN
FT                   GKAYVIVQGIPRAETIYYTKDKSVSAFLLAVIVFIFGFLFITKRKMNYIEEISKGLLQI
FT                   SKGNLDYRVKRVGNDELALLADNINYMAKELTDKIEKERKIEKAKNDLITNVSHDLRTP
FT                   LTSIMGYLGLIKEKKFKSEKELMEYASVAYTKSEKLKNLIQDLFSYTKYSNDRVELHKQ
FT                   KIILAELLDQLIEELVPICEENKVSINKYAWDSEIVSEIDADKMVRVFENLIMNAIRYS
FT                   IKPGEIKINLYKERVFSMVSISNKSEEISKDNLRKLFDRFYRLDKSRTASTGGSGLGLA
FT                   IAKSIVELHKGSIWAEYQKGYITFYIKLIMAEDE"
FT   sig_peptide     424776..424908
FT                   /locus_tag="CBO0366"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.290 between residues 45 and 46"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(424842..424910,425331..425390)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0366 by TMHMM2.0 at aa 23-45 and 186-205"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    425331..425540
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   50.6, E-value 3.7e-12"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    425571..425774
FT                   /note="Pfam match to entry PF00512 HisKA, His Kinase A
FT                   (phosphoacceptor) domain, score 61.2, E-value 2.3e-15"
FT                   /inference="protein motif:Pfam:PF00512"
FT   misc_feature    425910..426242
FT                   /note="Pfam match to entry PF02518 HATPase_c, Histidine
FT                   kinase-, DNA gyrase B-, and HSP90-like ATPase, score 101.3,
FT                   E-value 2e-27"
FT                   /inference="protein motif:Pfam:PF02518"
FT   CDS_pept        426362..427777
FT                   /transl_table=11
FT                   /locus_tag="CBO0367"
FT                   /product="sodium/solute symporter"
FT                   /note="Similar to Escherichia coli sodium/pantothenate
FT                   symporter PanF or b3258 SWALL:PANF_ECOLI (SWALL:P16256)
FT                   (483 aa) fasta scores: E(): 1.3e-21, 24.83 38d in 451 aa"
FT                   /db_xref="GOA:A5HYR1"
FT                   /db_xref="InterPro:IPR001734"
FT                   /db_xref="InterPro:IPR038377"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR1"
FT                   /protein_id="CAL81920.1"
FT                   /translation="MKGYLIFIIIYAIILILAGFFVKKYVKGAADFFVAGRKLNSKLLC
FT                   TTLIAANIGAGSTVGITGIAYKYGVSSYWWIFMSAIGTAVLAFLVGPKIWEKSMKYNLY
FT                   TLGDYLDIRYSKYFKGAISIMMTIGTLALFAGQLMGIAWILDVTSGIDKNIGILIGAVV
FT                   VVLYFSSGGLLSSAIVNVLELVIIILGFIIAVPFCIKSVNGFSGLHTAILNNLPANEGV
FT                   NYFSLKGIGISTIVGWFLMLTPSFFISPGLIGKVYGAKDMKTIKKGAGICAVVQGLFAF
FT                   LPTILGMCAFAVFPNLNQQELALPMVMKNLMPFSVSALALAAIFAAEVSTADAVLYMLT
FT                   TTFTEDIYKTFINPKIEDKKLLKAGRIVTIVGGILGVAMAFILPNIITALSIFYTLMSV
FT                   SLTVPLLFGLFSEKPNTKIAFTSSIIGIIVTLYLQFQNNDKGIWILNAQSTGILCSLIV
FT                   MMIFLALKKKITT"
FT   sig_peptide     426362..426443
FT                   /locus_tag="CBO0367"
FT                   /note="probabilty 0.766, with cleavage site probability
FT                   0.751 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(426371..426427,426488..426556,426569..426637,
FT                   426728..426796,426824..426892,426911..426979,
FT                   427049..427117,427175..427243,427313..427381,
FT                   427442..427510,427520..427588,427607..427660,
FT                   427688..427756)
FT                   /note="13 probable transmembrane helices predicted for
FT                   CBO0367 by TMHMM2.0 at aa 4-22, 43-65, 70-92,
FT                   123-145,155-177, 184-206, 230-252, 272-294, 318-340,
FT                   361-383,387-409, 416-433 and 443-465"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    426455..427639
FT                   /note="Pfam match to entry PF00474 SSF, Sodium:solute
FT                   symporter family, score 47.2, E-value 3.9e-11"
FT                   /inference="protein motif:Pfam:PF00474"
FT   CDS_pept        429001..430320
FT                   /transl_table=11
FT                   /gene="rnfC"
FT                   /locus_tag="CBO0368"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Rhodobacter capsulatus electron transport
FT                   complex protein RnfC SWALL:RNFC_RHOCA (SWALL:Q52716) (519
FT                   aa) fasta scores: E(): 1.1e-57, 39.18 id in 444 aa"
FT                   /db_xref="GOA:A5HYR2"
FT                   /db_xref="InterPro:IPR009051"
FT                   /db_xref="InterPro:IPR010208"
FT                   /db_xref="InterPro:IPR011538"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="InterPro:IPR019554"
FT                   /db_xref="InterPro:IPR026902"
FT                   /db_xref="InterPro:IPR037225"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR2"
FT                   /protein_id="CAL81921.1"
FT                   /translation="MELLTFKKGVHPPHGKYLTEKKPIEEYLPKGDLVFPMSQHIGAPC
FT                   NPVVKKGDRVLVGQVIGEATGFVSAPIHSSVSGTVKNLAPVLTAAGTKVMAVIVENDGQ
FT                   YEEIEMPKPKDYNEMTKEEIIKLIQQAGIVGMGGACFPTHVKLSPPPDKKIDSIIVNAA
FT                   ECEPYLTCDHRLMLEESDKIVEGLKIILKIFPEAKGYIGIENNKPDAIEAMKKASEGIA
FT                   NIEVKALKTKYPQGAEKQLIYAIKGREVQSGKLPADAGCVVQNTATVREIYNAVVLGRP
FT                   LIERIITVTGEAVKEPKNIRMKLGTNLRELVEFCGGYKEDPVKVISGGPMMGMTIPTLD
FT                   IPTVKGSSGLLSLTTAQAVLPQASSCIRCGRCVEACPMNLIPSTLDSLSNRGELASFEE
FT                   LHGIDCIECGCCTFVCPAKRHLIQSIRTAKRTVIASKRKK"
FT   misc_feature    429322..429990
FT                   /note="Pfam match to entry PF01512
FT                   Complex1_51K,Respiratory-chain NADH dehydrogenase 51 Kd
FT                   subunit, score 149.7, E-value 5.4e-42"
FT                   /inference="protein motif:Pfam:PF01512"
FT   misc_feature    430075..430146
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 23.7, E-value 4.6e-05"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    430096..430131
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    430213..430248
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   CDS_pept        430343..431275
FT                   /transl_table=11
FT                   /gene="rnfD"
FT                   /locus_tag="CBO0369"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Pseudomonas stutzeri electron transport
FT                   complex protein RnfD SWALL:RNFD_PSEST (SWALL:Q9EVN4) (354
FT                   aa) fasta scores: E(): 1.1e-19, 38.29 38d in 329 aa"
FT                   /db_xref="GOA:A5HYR3"
FT                   /db_xref="InterPro:IPR004338"
FT                   /db_xref="InterPro:IPR011303"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR3"
FT                   /protein_id="CAL81922.1"
FT                   /translation="MSESMYTLSSSPHIRSKDSVQSIMRDVVIALLPAAIAGIYFFKLK
FT                   ALLVILTAVISCVAAEYIWEKATGRDISIGDLSAVVTGMLLAFNVPPTLPLWMIVIGSF
FT                   FSIIVVKQFFGGIGQNIVNPALAGRAFLLASWPVAMTTWTVDGVTTATPLAILKGAPGE
FT                   LPNLASAFVGHIGGCIGETSALALLIGFAYLLYRRIITWHIPVAYVGTVFVLTTIIGRH
FT                   GAMSGNAIYEIFVGGLMLGAIFMATDYTTSPMTKKGQVIFAIGCGVITTVIRIFGGYPE
FT                   GVSYSIILMNLVVPLIDKFVAPRVFGGVK"
FT   misc_feature    430355..431269
FT                   /note="Pfam match to entry PF03116 NQR2_RnfD_RnfE,
FT                   NQR2,RnfD, RnfE family, score 326.2, E-value 3.9e-95"
FT                   /inference="protein motif:Pfam:PF03116"
FT   misc_feature    order(430400..430468,430481..430534,430628..430696,
FT                   430730..430798,430856..430924,430937..431005,
FT                   431015..431083,431120..431173,431201..431269)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0369 by TMHMM2.0 at aa 20-42, 47-64, 96-118,
FT                   130-152,172-194, 199-221, 225-247, 260-277 and 287-309"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        431275..431946
FT                   /transl_table=11
FT                   /gene="rnfG"
FT                   /locus_tag="CBO0370"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Pseudomonas stutzeri electron transport
FT                   complex protein RnfG SWALL:RNFG_PSEST (SWALL:Q9EVN3) (228
FT                   aa) fasta scores: E(): 5.1e-07, 30.15 38d in 189 aa"
FT                   /db_xref="GOA:A5HYR4"
FT                   /db_xref="InterPro:IPR007329"
FT                   /db_xref="InterPro:IPR010209"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR4"
FT                   /protein_id="CAL81923.1"
FT                   /translation="MEKNETLKLGLKLFIITAIAGLILGGAFVITKKPIADQVEKTNTE
FT                   AMKEILPKADKFEKMEGKAKDAVTEVNEGKKGNDVAGYAIKVLTKGYGGQIEMMVGVSK
FT                   EGKVEGIKILSHSETPGLGANAPQPKFSGQFKGKSTEKDLEVVKTAPGKDNEIEAMTGA
FT                   TITSKAVTKGVNDAVKFYKDELLKTPSESKEVDGKSGATTSFNTEDTKLNKYVVNYEKM
FT                   N"
FT   sig_peptide     431275..431380
FT                   /gene="rnfG"
FT                   /locus_tag="CBO0370"
FT                   /note="probabilty 0.854, with cleavage site probability
FT                   0.431 between residues 36 and 37"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    431299..431367
FT                   /note="1 probable transmembrane helix predicted for CBO0370
FT                   by TMHMM2.0 at aa 9-31"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    431527..431817
FT                   /note="Pfam match to entry PF04205 FMN_bind, FMN-binding
FT                   domain, score 78.3, E-value 1.7e-20"
FT                   /inference="protein motif:Pfam:PF04205"
FT   CDS_pept        431960..432559
FT                   /transl_table=11
FT                   /gene="rnfE"
FT                   /locus_tag="CBO0371"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Rhodobacter capsulatus electron transport
FT                   complex protein RnfE SWALL:RNFE_RHOCA (SWALL:P97055) (243
FT                   aa) fasta scores: E(): 1.1e-27, 48.76 id in 203 aa"
FT                   /db_xref="GOA:A5HYR5"
FT                   /db_xref="InterPro:IPR003667"
FT                   /db_xref="InterPro:IPR010968"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR5"
FT                   /protein_id="CAL81924.1"
FT                   /translation="MSVLGERLKNGIIDENVTFVQVLAMCPTLAVTSSAENGIGMGIAS
FT                   TVVLMGSNLVISLLRKVIPDKIRIPAFIVVIAGFVTLLQFLMQGFVPDLYTKLGIFIPL
FT                   IVVNCVILGRAEAYASKYGPVSSIFDGLGQGLGFTLSLGVIGMIRELLGAGQLFGHQIM
FT                   PSSFQPALIMILAPGAFFTLGILMAIINNMKLKKAK"
FT   misc_feature    431960..432523
FT                   /note="Pfam match to entry PF02508 Rnf-Nqr, Rnf-Nqr
FT                   subunit, membrane protein, score 239.7, E-value 4.4e-69"
FT                   /inference="protein motif:Pfam:PF02508"
FT   misc_feature    order(432071..432139,432158..432226,432254..432313,
FT                   432350..432418,432461..432529)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0371 by TMHMM2.0 at aa 38-60, 67-89, 99-118, 131-153 and
FT                   168-190"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        432610..433188
FT                   /transl_table=11
FT                   /gene="rnfA"
FT                   /locus_tag="CBO0372"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Escherichia coli, Escherichia coli O6,and
FT                   Escherichia coli O157:H7 electron transport complex protein
FT                   RnfA or b1627 or c2019 or z2633 or ecs2336 SWALL:RNFA_ECOLI
FT                   (SWALL:P76181) (193 aa) fasta scores: E(): 2.5e-36, 55.91
FT                   38d in 186 aa"
FT                   /db_xref="GOA:A5HYR6"
FT                   /db_xref="InterPro:IPR003667"
FT                   /db_xref="InterPro:IPR011293"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR6"
FT                   /protein_id="CAL81925.1"
FT                   /translation="MKIFALIISALFVNNFVLARFLGICSFLGVSKKVETATGMGLAVT
FT                   FVMALASLISYIVYNAILVPLNITYLYTIAFILVIAALVQFVEMVIKKKSPGLYKALGI
FT                   FLPLITTNCAILGAVIINMNDKLNLIESLIFGTFSGVGYMLAIVLLAGLRERMEACDKM
FT                   PKAMQGLPISLITAGLMAIAFLGFQGLLH"
FT   misc_feature    432610..433185
FT                   /note="Pfam match to entry PF02508 Rnf-Nqr, Rnf-Nqr
FT                   subunit, membrane protein, score 286.1, E-value 4.7e-83"
FT                   /inference="protein motif:Pfam:PF02508"
FT   misc_feature    order(432622..432681,432718..432786,432814..432882,
FT                   432901..432969,432997..433065,433114..433182)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0372 by TMHMM2.0 at aa 5-24, 37-59, 69-91,
FT                   98-120,130-152 and 169-191"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        433202..434035
FT                   /transl_table=11
FT                   /gene="rnfB"
FT                   /locus_tag="CBO0373"
FT                   /product="electron transport complex protein"
FT                   /note="Similar to Rhodobacter capsulatus electron transport
FT                   complex protein RnfB SWALL:RNFB_RHOCA (SWALL:Q07394) (187
FT                   aa) fasta scores: E(): 1.8e-12, 41.61 id in 161 aa"
FT                   /db_xref="GOA:A5HYR7"
FT                   /db_xref="InterPro:IPR007202"
FT                   /db_xref="InterPro:IPR009051"
FT                   /db_xref="InterPro:IPR010207"
FT                   /db_xref="InterPro:IPR011005"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR7"
FT                   /protein_id="CAL81926.1"
FT                   /translation="MNELLFPILSLGALGLVFGVLLGYASKKFAVEVDPKVPLIRDSLP
FT                   GANCGGCGYAGCDAYAQAVAEGAAPANACTVGGASVAEKVAEIMGVSIDESEPLKAYVK
FT                   CNGTCDKAKQRGEYYGTMDCQQASVVPGGASKSCQAGCLGLGSCVKACAFDAIHVTEGG
FT                   TAEVDPEKCVGCGACVKACPRAVIDLKPLSAVIRVACNSKDTLKAVKDVCQVGCMTCRL
FT                   CEKTCPVKAITMENNLPVVDKEKCVKCMACVKKCPTNALIAYGKDIVVKEEKPAN"
FT   sig_peptide     433202..433274
FT                   /gene="rnfB"
FT                   /locus_tag="CBO0373"
FT                   /note="probabilty 0.950, with cleavage site probability
FT                   0.620 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    433211..433279
FT                   /note="1 probable transmembrane helix predicted for CBO0373
FT                   by TMHMM2.0 at aa 4-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    433328..433432
FT                   /note="Pfam match to entry PF04060 FeS, Putative Fe-S
FT                   cluster, score 51.2, E-value 2.5e-12"
FT                   /inference="protein motif:Pfam:PF04060"
FT   misc_feature    433694..433765
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 38.3, E-value 1.8e-08"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    433715..433750
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    433850..433885
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    433916..433987
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 37.7, E-value 2.8e-08"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    433937..433972
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   repeat_region   434082..434117
FT                   /rpt_family="CB.553"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="aaaagagttaagtaaataaatttacttaactctttt"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        434381..435469
FT                   /transl_table=11
FT                   /locus_tag="CBO0374"
FT                   /product="putative cell Surface Protein"
FT                   /note="Similar to the N-terminal region of Clostridium
FT                   difficile Cwp66 SWALL:Q9FA27 (EMBL:AF093106) (610 aa) fasta
FT                   scores: E(): 1.7e-14, 30.85 38d in 350 aa, and to Bacillus
FT                   subtilis N-acetylmuramoyl-L-alanine amidase CwlB precursor
FT                   LycT or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114)
FT                   (496 aa) fasta scores: E(): 4.4e-08, 29.64 id in 361 aa"
FT                   /db_xref="InterPro:IPR007253"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR8"
FT                   /protein_id="CAL81927.1"
FT                   /translation="MLKKNKKILSVITATLVMAIGISFTNVQAASIKRMNGSNRIDTAN
FT                   KTAKEIFQKSEAVILVNGTGYADAVSSAPLSKLLNAPILLTENKGALESDVLKTINDLQ
FT                   NVKKIYIVGGTGVVSTTMENSLKSKGFQVIRYDGQKYGDKTRYGTNARVAEEILKLSPK
FT                   SKTGILVNGQDGYADALSVASVAATNGYPVLFGNTQNVPNVIKNNIISKNKLQILAVGG
FT                   SGVLPSSVVSSVSGKKITSDAQSKNRFQTNLAVLEYFKGKGGLDFSNVYIAAGGQAGKA
FT                   GQSQFADALVASAAAAKTGSPLVLSGLGAGTTEIANAEKFIETNIEDEGNLVIVGGKAS
FT                   VSEAVEQKLDEKVGDFRILDIL"
FT   sig_peptide     434381..434465
FT                   /locus_tag="CBO0374"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.982 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    434477..434755
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 48.1, E-value 2e-11"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    434795..435079
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 35.9, E-value 9.6e-08"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    435236..435424
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 13.2, E-value 0.0018"
FT                   /inference="protein motif:Pfam:PF04122"
FT   repeat_region   435473..435528
FT                   /rpt_unit_seq="(agagtat)8"
FT   repeat_region   435533..435568
FT                   /rpt_family="CB.553"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="aaaagagttaagtaaataaatttacttaactctttt"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        complement(435663..436199)
FT                   /transl_table=11
FT                   /locus_tag="CBO0375"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani heptaprenyl
FT                   diphosphate synthase component I ctc01025 SWALL:Q896H9
FT                   (EMBL:AE015939) (181 aa) fasta scores: E(): 2.6e-38,63.37
FT                   38d in 172 aa"
FT                   /db_xref="GOA:A5HYR9"
FT                   /db_xref="InterPro:IPR010898"
FT                   /db_xref="InterPro:IPR014535"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYR9"
FT                   /protein_id="CAL81928.1"
FT                   /translation="MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANV
FT                   ISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKEN
FT                   LSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKN
FT                   LGNVKLFNELKNNEK"
FT   misc_feature    complement(order(435729..435797,435810..435878,
FT                   435906..435965,436002..436070,436098..436166))
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0375 by TMHMM2.0 at aa 12-34, 44-66, 79-98, 108-130 and
FT                   135-157"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(436109..436199)
FT                   /locus_tag="CBO0375"
FT                   /note="probabilty 0.997, with cleavage site probability
FT                   0.706 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(436217..436609)
FT                   /transl_table=11
FT                   /locus_tag="CBO0376"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium tetani membrane associated
FT                   protein ctc01026 SWALL:Q896H8 (EMBL:AE015939) (132 aa)
FT                   fasta scores: E(): 1.8e-16, 43.28 38d in 134 aa"
FT                   /db_xref="GOA:A5HYS0"
FT                   /db_xref="InterPro:IPR024045"
FT                   /db_xref="InterPro:IPR038690"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS0"
FT                   /protein_id="CAL81929.1"
FT                   /translation="MKKGDKIVIYIVSILLALSVISIIFFKFFVKSENAVAVIKQNGKI
FT                   IEKVDLSKVKEKRQLKINYNDKDHKGYNVIEIDKGSIRFIDADCPDKVCIKSGVLKKPG
FT                   ETAACLPHKIIITIEKNDKEVDEVSY"
FT   sig_peptide     complement(436501..436609)
FT                   /locus_tag="CBO0376"
FT                   /note="probabilty 0.946, with cleavage site probability
FT                   0.574 between residues 35 and 36"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(436532..436591)
FT                   /note="1 probable transmembrane helix predicted for CBO0376
FT                   by TMHMM2.0 at aa 7-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(436724..437758)
FT                   /transl_table=11
FT                   /locus_tag="CBO0377"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Clostridium tetani thiamine biosynthesis
FT                   lipoprotein apbe precursor ApbE or ctc01027 SWALL:Q896H7
FT                   (EMBL:AE015939) (342 aa) fasta scores: E(): 1.2e-63,53.48
FT                   38d in 344 aa"
FT                   /db_xref="GOA:A5HYS1"
FT                   /db_xref="InterPro:IPR003374"
FT                   /db_xref="InterPro:IPR024932"
FT                   /db_xref="InterPro:IPR042159"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS1"
FT                   /protein_id="CAL81930.1"
FT                   /translation="MKIKYVTILLLCICLPLVFVGCDSKSEEPVSRETYLMGTIINIKA
FT                   YGKDADKAVQASVDKISDIENKMSLNISTSEVNKINKNAGIVPVKVSKNTFDVVKASLI
FT                   YSEKSKGSFDITVEPLVSLWGIGTDKARIPSKDEINNALKLINYKDVIINEKESTVMLK
FT                   RKGQAIDLGAIAKGYTADELKKVLLNYNVSSAFLSLGGNVYVLGNKPDKTLWKIGVQNP
FT                   LEPRGDYLGIVSVSDKSVVTSGNYERFFERNGKRYHHIFDTKTGYPAEKGLISVSIISD
FT                   KSIDGDALSTSVYTLGLDEGKKLIESLKGVEAIFVTNDKKVYVTSGLKDIFKLTNTDFK
FT                   LQNK"
FT   misc_feature    complement(436772..437731)
FT                   /note="Pfam match to entry PF02424 ApbE, ApbE family,score
FT                   252.8, E-value 4.8e-73"
FT                   /inference="protein motif:Pfam:PF02424"
FT   sig_peptide     complement(437677..437758)
FT                   /locus_tag="CBO0377"
FT                   /note="probabilty 0.996, with cleavage site probability
FT                   0.716 between residues 26 and 27"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(437693..437725)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        438368..442561
FT                   /transl_table=11
FT                   /locus_tag="CBO0378"
FT                   /product="putative cell Surface Protein"
FT                   /note="Similar to Bacillus sphaericus surface-layer 125 kDa
FT                   protein precursor SWALL:SLAP_BACSH (SWALL:P38537) (1176 aa)
FT                   fasta scores: E(): 2.3e-17, 25.3 38d in 1308 aa,and to
FT                   Clostridium difficile Cwp66 cwp66 SWALL:Q9F9G7
FT                   (EMBL:AF194870) (610 aa) fasta scores: E(): 5.3e-16,25.59
FT                   38d in 547 aa"
FT                   /db_xref="InterPro:IPR007253"
FT                   /db_xref="InterPro:IPR032812"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS2"
FT                   /protein_id="CAL81931.1"
FT                   /translation="MNKKGTRALASATVVGLVLATVATGNVKAAPGDVNKVQGNDRYET
FT                   AANVAKANWKDGAKDVIIASGEGYADSLSASVLAKKLNAPIILTTAGELNSNAKSALQT
FT                   LKPENVYVIGGNASVSEAVRSGLKKDYKVTELGGKTRFETNLAVANHLVDKLGVKADNV
FT                   MVVNGQDGFSDALSAAPVAAAKEQVLLIVGRDASTADAAANFVKKHNSKVTVIGTEGVV
FT                   PAAVYNKLGASERVNGGADRFETNLNIMKHFKLNADTMYVANATGQGYADALVASALAG
FT                   KSGAPLVLVDTKDSESTKNAIKYIADNKTDKTEVSTVGGSGVMPDEIVNEIETAVNPEL
FT                   SAAEKAVKAYEDAKIGTSDEIAAAKALKADAVKAVDNVKDAAKKSAFEARIEAKDKAIK
FT                   DAEAKMEVSVESVEAINLNQVKVVFTSPVDSDSAEDVTNYEIGGKKLTKDKDEDTDAIG
FT                   VLQDDDRTVILTLADEQEQHDEVTVKVKKGVLSEDKTKNIKEYEKDVVFKDLDEPKVSK
FT                   VSVKGNNKIVVEFSEAVLVNKVEGNDVDEKKEDAAKKLADKFELNGQSIQSLGYDKDNS
FT                   EVKDTLIYGDKAYVNKVEFYFSSALDSGKNELKVLEGKKGDILYDAGNFIVKEAKFDIN
FT                   VDKVTSSPKIKSVKGGTDGKIYIDFDRAMDTKTAEKIGNYVLNNGTGTLAGKAELKEND
FT                   TQVKITLDNSSLIKTGSNTIEITDKVKDAYGNKVDKDTRLSFVAEKDEEKPEVVLVEAI
FT                   DAETIRVRFNEDVKYKHAINESNYELRDSNGIRIDGDIKEIVAANGTEDDTDVYDIKMG
FT                   KGKNLTGDKYTLKIKNIADTSDNVMDDYETEFKGEDDEAPTVKGVAQNGKKVIVRFSEK
FT                   MDRTSLRKTENYRYIDSDDNDKVKELPSKTTITVASDDKTVTIEFPDSYEDKVGGLIVK
FT                   SDVKDVAGNKMDADHKADGFKPLDAVQVKENSMKVSRADDDVEVELVFDAAVDKVYKEN
FT                   FKFGKANKETIIADSVRINGDKVTFKFNDGANAKAIKACGSSLVVKTDTTGSDKPAAED
FT                   KSGKEIKIEDPVQVYDNLIAPELDADEKDGYVGNTAWKVGVEGDKATITIAFDTQIANL
FT                   KDAYLDDFKFMADNTGDELEVNKVEVEDGNTLKYTFDEDINKLKDVKVITVKADKDNID
FT                   VRTEKDLAKNDQKYKPTNDDINGWKLKTGTAINDALKAKAETDLTKAIEEANAKKAGVE
FT                   KSADGKDIEKTGKWVTEAEMTTFETAIKSATDAKESKDATAKSLNDAKTALDKAVEEFN
FT                   KAIKDGTKEAAVNDTDSTLKTFAIAGEDVLALSNIDTTGAEKNFADFTGDKVKGIAVKA
FT                   NSDKAKSVVVKVNNVVVDEADLATKVLAENDVITVVVTAEDSTKTTTYTVTVVK"
FT   sig_peptide     438368..438452
FT                   /locus_tag="CBO0378"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.998 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    438482..438745
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 48.5, E-value 1.6e-11"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    438767..439054
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 36.6, E-value 5.8e-08"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    439067..439360
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 46.1, E-value 8.2e-11"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    439193..439216
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   repeat_region   complement(442831..442969)
FT                   /note="intergenic repeat 1"
FT   CDS_pept        443167..445236
FT                   /transl_table=11
FT                   /locus_tag="CBO0379"
FT                   /product="putative cell Surface Protein"
FT                   /note="Similar to Bacillus subtilis
FT                   N-acetylmuramoyl-L-alanine amidase cwlb precursor lytc or
FT                   cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa)
FT                   fasta scores: E(): 2.4e-29, 33.09 38d in 417 aa, and to
FT                   Clostridium difficile Cwp66 cwp66 SWALL:Q9FA27
FT                   (EMBL:AF093106) (610 aa) fasta scores: E(): 1.1e-26,31.93
FT                   38d in 501 aa"
FT                   /db_xref="InterPro:IPR007253"
FT                   /db_xref="InterPro:IPR007280"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS3"
FT                   /protein_id="CAL81932.1"
FT                   /translation="MVKSKEKNKIFFTLLAITLIFIVNSNKVKANDEINFKRLDGKGRY
FT                   ETSSSICSGGWDTSEYAVLASGEGFADALSAAPLAKKYDAPIILTGKNKLNDNAKDQLK
FT                   KLDTKEVIIVGGPGSISEDIVTELKDLGIKVNRIYGEDRYKTSLKIAKEIGVKNGVVVT
FT                   NGLGFADALAMAPIAASKQMPILLTPSDKLTSDTMEFLKKNSYNKSYILGGTATVSDYI
FT                   KNSLKNPTRLSGADRYQTNIAILNHFKEDLNLDEVYISSGDGYADALSGSVLASKNKSP
FT                   IILINDNLNKSTKDFVSNNKSNFKNVIIFGGEGVVKEPTISSLFGAFRSGETRSDTKEV
FT                   SAEKWDRSYLKDYHIELPESGKLDIEYDISNFTRFDLIVLDIKNNEIIKKSYNYLKNNK
FT                   SIHDNYNDIRLPKGKYIVRVHAFNMDGTYTIKAKYTQEGEGFEKESNNDIKTANVLEPN
FT                   KSIIGSIHSYNDVDYYKFTLNEKGSLKINLKHNQYGRYGFKVNLLDENNKSISQFISGG
FT                   EDINSYSNKLRLPKGTYFVRIECEKWNDEPLQYELNLDYDIEGENYESEPNDYIQDANY
FT                   IKCNKEYIGNIQSRDDRDYYKINLNSDSKITINFKHDEGYGKWTIYLYDKDNKPIQRFK
FT                   SYGYEINKDFDPIELEAGEYYVSVEGRDSLDYTINVKREAPDKSNNENKKVKRR"
FT   sig_peptide     443167..443254
FT                   /locus_tag="CBO0379"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.998 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    443275..443547
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 53.5, E-value 4.9e-13"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    443572..443841
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 73.5, E-value 4.5e-19"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    443854..444135
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 60.8, E-value 3.2e-15"
FT                   /inference="protein motif:Pfam:PF04122"
FT   CDS_pept        445871..450772
FT                   /transl_table=11
FT                   /locus_tag="CBO0380"
FT                   /product="putative cell surface protein"
FT                   /note="Similar to Clostridium difficile Cwp66 SWALL:Q9F9G7
FT                   (EMBL:AF194870) (610 aa) fasta scores: E(): 1.4e-17,26.37
FT                   38d in 565 aa, and to Bacillus subtilis
FT                   N-acetylmuramoyl-L-alanine amidase CwlB precursor lytc or
FT                   cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa)
FT                   fasta scores: E(): 5.8e-12, 27.72 38d in 339 aa"
FT                   /db_xref="InterPro:IPR007253"
FT                   /db_xref="InterPro:IPR026906"
FT                   /db_xref="InterPro:IPR032675"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS4"
FT                   /protein_id="CAL81933.1"
FT                   /translation="MNKKGTRVLASATAIGIVLTMLPSGNVKAAPGDVNKMPGKDRYET
FT                   AANVATANWKEGAENVIIASGEGYADSLSASVLAKKLNAPIILTKSKELHKGAKEALKT
FT                   LKAKNLHVIGGNASVSQSIRDDLKREGYALTELGGKTRFETNLAIANYLVEKHNVKADE
FT                   ILVVNGKDGFSDALSAASVAAAKGQILLIVGKDPSTADLAAKFIEEHNSKVTVIGTEKV
FT                   IPKTVYDKLGAKERVIGGANRFETNLNIMKHFKLNTDKLYVANATGDGYADALVASALA
FT                   GRTTSQLILTHTKDSQETKNAIDYIKSIKNDKTEVGLVGGNSVIPEEVVDKIKEVVKEE
FT                   STKNPGKPSRPSKPSKPTEPEKNKFEIIWSFADVDEDLDVNTTNGKDDAKHDYVYIKFN
FT                   KPISVSGDSKGVLNTSNYKLNKMPLPKGTEIKPNIKGLDDADKVTDSITIVLPNEYLNG
FT                   KNEPHIITISSYLESSTTGDVLTNGGDKILTWSSDGREIFNASFSAEKQIYLAEVTAKK
FT                   DLTLRDNLINAEKALETAKAAIKSLNNKTSGKSALEERVNDVEKTVKNARIKFDEKTDF
FT                   EFSNGRITKYIGNETDIVIPEAIRGEKVTAIEDSAFKNKNLTSVKIPKTVESIGMQAFA
FT                   KNNLTSIELPESLKYMGNIAFMDNKLASVKIPKDLINIPTGAFSKNEISSVVISEGVIE
FT                   IALSAFAENKLESVVIPSTVEFIRNKAFSGNQLKVVNIPSNVKDIGKDAFANNKNIKLV
FT                   YYKLIEAIKRAESIKTEGKEADKVKVLKKAIEEGNKLNDKPNATLEEVNKVVESINNAI
FT                   EALNKESSKTTIKQIKPLGIKNIDVDLGTTEANVKAKLPQKVTIVDSKDKEHNVDINWS
FT                   ILKYDRNIAADYTATGTFKLPEGVLQSNPEIDLKVTLKVTVTPKGVENREWELKDFTFK
FT                   GTAITGFSESGKEKFKKSKDLILPNTNESGEKINEIADKAFCSEFEIKGDSNESFKDKD
FT                   KAKQDPKIGINSIIIPYTVKIIGKEAFRNNCLTDINIPKSVTTIKDLAFNNNKLKTLSI
FT                   PDSVTELGNGAFTLNDIADLKLSKELKTIQAAFGYNNLVSVTIPEGVTRIEDMAFSDNK
FT                   LAQVTLPTTLEYLSGFNNNNLKSINIPTSVTELGKKAFARNKISSVKIPSNVKKIGVSA
FT                   FQNTWHDTFLTSIIIEDGVENIDEYAFSLNHLKDVNIPKSVKELAPNAFHKNLGYDGVV
FT                   HLFTDNYNNPNNLKESKYQVIDPAKLTIKYISEDKTLKEEEIWKIEKEGEEKYLHIGDK
FT                   AVEIAPEYEDNEYELENTDVRKVDLSYKENEFIVKCKKKDLVDKLTIKSIGDVAPVVVD
FT                   FGTEQNVVMDKLSKNTYIVDSNGENHEVELNWTIKNYNGNVPGEYTAVAIFKLPQGISQ
FT                   SEPETILEVQGRIIVKEDFENIQDSKWGVEDFNFEGTILAGFSDKGEERLKANKDLILP
FT                   KANDKGEAITKVKNYAFAKNGLTSLAIPKGLSGLVIGTNAFEENQINTLYIPEGVKEID
FT                   AYAFSKNKLKYVDFPGTLKKIGNHALADNQLVSVIFSEETNMIAIDRFSFANNKITSII
FT                   LLNDVTKVNGEAFTGNQSCNSDGKVHIFTKSFDPNNCNQWFPDSQYHKIIPLNK"
FT   sig_peptide     445871..445955
FT                   /locus_tag="CBO0380"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.999 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    445973..446248
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 47.9, E-value 2.4e-11"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    446273..446560
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 35.9, E-value 9.5e-08"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    446573..446866
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 46.3, E-value 7.1e-11"
FT                   /inference="protein motif:Pfam:PF04122"
FT   CDS_pept        complement(450843..451277)
FT                   /transl_table=11
FT                   /locus_tag="CBO0381"
FT                   /product="putative exported protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS5"
FT                   /protein_id="CAL81934.1"
FT                   /translation="MNKGKNKFIILGIIVVVLLGVFSYNQYQKKAKFIGTPLEPIYKIV
FT                   KIQNFKEGTYEEYKELFANPNKAITKEQFEAYRNSNKSNDMFKYDGDSIKGIMKHMKSE
FT                   EKGTDLYKVYYLKNVKDDNEKKDANYWMVVKENNKWVIKN"
FT   sig_peptide     complement(451199..451277)
FT                   /locus_tag="CBO0381"
FT                   /note="probabilty 0.849, with cleavage site probability
FT                   0.317 between residues 25 and 26"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        complement(451403..452434)
FT                   /transl_table=11
FT                   /locus_tag="CBO0382"
FT                   /product="putative membrane-associated acyltransferase"
FT                   /note="Similar to Staphylococcus caprae IcaC SWALL:Q9AIQ5
FT                   (EMBL:AF246927) (357 aa) fasta scores: E(): 6.4e-13,25.71
FT                   38d in 350 aa, and to Clostridium tetani conserved membrane
FT                   protein ctc00459 SWALL:Q898I8 (EMBL:AE015937) (348 aa)
FT                   fasta scores: E(): 2.2e-44, 36.91 38d in 344 aa"
FT                   /db_xref="GOA:A5HYS6"
FT                   /db_xref="InterPro:IPR002656"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS6"
FT                   /protein_id="CAL81935.1"
FT                   /translation="MGEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLT
FT                   YNSSLVLNQLARFSVPAFIFLSGFGLALSYKKESKYLAYLGHRLKKVVPDYFVWYIVYI
FT                   FLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLN
FT                   MGIYILLRYPNIPKSISENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFL
FT                   LLLSTYILLKDTFLCLRANNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFY
FT                   MISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIVFFTCFIGGLLISILINKFK
FT                   KLL"
FT   misc_feature    complement(451406..452401)
FT                   /note="Pfam match to entry PF01757
FT                   Acyl_transf_3,Acyltransferase family, score -22.0, E-value
FT                   0.00024"
FT                   /inference="protein motif:Pfam:PF01757"
FT   misc_feature    complement(order(451436..451504,451532..451600,
FT                   451619..451687,451715..451783,451820..451873,
FT                   451916..451975,451994..452062,452090..452149,
FT                   452210..452269,452327..452386))
FT                   /note="10 probable transmembrane helices predicted for
FT                   CBO0382 by TMHMM2.0 at aa 17-36, 56-75, 96-115,
FT                   125-147,154-173, 188-205, 218-240, 250-272, 279-301 and
FT                   311-333"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        452865..454376
FT                   /transl_table=11
FT                   /locus_tag="CBO0383"
FT                   /product="putative exported protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   hypothetical protein Tte1561 SWALL:Q8R9P4 (EMBL:AE013112)
FT                   (355 aa) fasta scores: E(): 3.2e-20, 37.09 38d in 248 aa"
FT                   /db_xref="InterPro:IPR032485"
FT                   /db_xref="InterPro:IPR032812"
FT                   /db_xref="InterPro:IPR038765"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS7"
FT                   /protein_id="CAL81936.1"
FT                   /translation="MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTV
FT                   TYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWS
FT                   NGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDE
FT                   EALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWN
FT                   IVRINGKNYQVDATWNDPVPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYL
FT                   HKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSD
FT                   GGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEK
FT                   FNEIFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINE
FT                   GKNIIITKKASYKRGGLYYLVISKPIKDTKGQEIKEPVVMRFKIY"
FT   sig_peptide     452865..452934
FT                   /locus_tag="CBO0383"
FT                   /note="probabilty 0.998, with cleavage site probability
FT                   0.978 between residues 24 and 25"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        454773..455684
FT                   /transl_table=11
FT                   /locus_tag="CBO0384"
FT                   /product="ABC transporter, solute-binding protein"
FT                   /note="Similar to Methanosarcina mazei phosphate-binding
FT                   protein mm2005 SWALL:Q8PVG0 (EMBL:AE013439) (302 aa) fasta
FT                   scores: E(): 2.8e-18, 30.16 38d in 305 aa"
FT                   /db_xref="GOA:A5HYS8"
FT                   /db_xref="InterPro:IPR011862"
FT                   /db_xref="InterPro:IPR024370"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS8"
FT                   /protein_id="CAL81937.1"
FT                   /translation="MKKKLSVMLSVLLTSALLFTACGSKQTSNSNEESSKKESGKIMCI
FT                   GSSTLAPVVSKAGDTLKSKHGTWKKMNDKLPDENIELAVSSGGSGAGVKAALEKTANFG
FT                   LISREVSKDEKAKMKEYNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGEAKT
FT                   WKDVDPSLPANKIVLVVRDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENK
FT                   DAIGYASVGLVDQNKGKLTPMEVDGVAPTKENITSGKYKIARPLLLIKDGKLTGVEQTF
FT                   VDFLKSEEGLKIIDESGFVSIK"
FT   sig_peptide     454773..454860
FT                   /locus_tag="CBO0384"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.577 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    454788..455648
FT                   /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial
FT                   extracellular solute-binding protein, score 16.8, E-value
FT                   0.02"
FT                   /inference="protein motif:Pfam:PF01547"
FT   misc_feature    454806..454838
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        455879..456751
FT                   /transl_table=11
FT                   /locus_tag="CBO0385"
FT                   /product="phosphate ABC transporter, permease protein"
FT                   /note="Similar to Methanosarcina acetivorans phosphate ABC
FT                   transporter, permease protein pstc or ma0888 SWALL:Q8TSB0
FT                   (EMBL:AE010753) (296 aa) fasta scores: E(): 4.7e-33,36.26
FT                   38d in 284 aa"
FT                   /db_xref="GOA:A5HYS9"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="InterPro:IPR011864"
FT                   /db_xref="InterPro:IPR035906"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYS9"
FT                   /protein_id="CAL81938.1"
FT                   /translation="MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNI
FT                   SFIDFITKSTWEPLGESPKLSILSFIMSTIYVTFLAVIIALPIAIGTSIFLANIASERL
FT                   RNILKPIIDMLSGIPSVIYGFIGLSVVVKFFERKLGVSSGECILSAAIVLAIMILPFII
FT                   SNCTDTMIKVYDKYFIYSKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAV
FT                   MMVIGNSPLMPKLLGKGETIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIF
FT                   YMLKKNMQQ"
FT   misc_feature    order(455915..455983,456101..456169,456206..456274,
FT                   456317..456376,456488..456556,456662..456730)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0385 by TMHMM2.0 at aa 13-35, 75-97, 110-132,
FT                   147-166,204-226 and 262-284"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    456089..456748
FT                   /note="Pfam match to entry PF00528
FT                   BPD_transp,Binding-protein-dependent transport system inner
FT                   membrane component, score 59.9, E-value 5.7e-15"
FT                   /inference="protein motif:Pfam:PF00528"
FT   CDS_pept        456787..457617
FT                   /transl_table=11
FT                   /locus_tag="CBO0386"
FT                   /product="ABC transporter, permease protein"
FT                   /note="Similar to Vibrio parahaemolyticus phosphate ABC
FT                   transporter, permease protein vpa1459 SWALL:Q87G58
FT                   (EMBL:AP005089) (287 aa) fasta scores: E(): 3.4e-30,38.54
FT                   38d in 275 aa"
FT                   /db_xref="GOA:A5HYT0"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="InterPro:IPR005672"
FT                   /db_xref="InterPro:IPR035906"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT0"
FT                   /protein_id="CAL81939.1"
FT                   /translation="MKRSLKDILLLLWYFLSTFLVVFIVFFIIAYVFKNGIHTINKDFL
FT                   LDNPKGMPLGKGGGIFPAIVGSLLLMFISSITASILGIATAVYLTLYNKNKKIDSIIHI
FT                   IIHSISGIPSIVLGLFGYSFLVFSLDLGVSLLAGAITLSIMIFPYIEVVTEKAIEEVDK
FT                   KLIVSSYSLGIDKTYTFFKIILPQCIEEIVSGIMLSGGFAMGATAPIMLTSAVISAPTP
FT                   DSIMSPVMALSYHLYILISQGISMENAYGTAFVLMSILIILNFLSMLIVRRRRV"
FT   sig_peptide     456787..456886
FT                   /locus_tag="CBO0386"
FT                   /note="probabilty 0.962, with cleavage site probability
FT                   0.605 between residues 34 and 35"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(456811..456879,456991..457059,457096..457164,
FT                   457177..457245,457369..457437,457531..457599)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0386 by TMHMM2.0 at aa 9-31, 69-91, 104-126,
FT                   131-153,195-217 and 249-271"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    456976..457614
FT                   /note="Pfam match to entry PF00528
FT                   BPD_transp,Binding-protein-dependent transport system inner
FT                   membrane component, score 67.2, E-value 3.6e-17"
FT                   /inference="protein motif:Pfam:PF00528"
FT   CDS_pept        457619..458365
FT                   /transl_table=11
FT                   /locus_tag="CBO0387"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="Similar to Clostridium tetani phosphate import
FT                   ATP-binding protein PstB or ctc01135 SWALL:Q895Y0
FT                   (EMBL:AE015939) (249 aa) fasta scores: E(): 1.8e-43,53.01
FT                   38d in 249 aa"
FT                   /db_xref="GOA:A5HYT1"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR005670"
FT                   /db_xref="InterPro:IPR015850"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT1"
FT                   /protein_id="CAL81940.1"
FT                   /translation="MNILETNNLNVYLDKNHILKNLNLNIEKNKVTAIIGPSGCGKSTL
FT                   LRTLNGIIKEEINFNIEGDIYFNGENTESIPLEFLRRKIGCVFQSPAPFPFSIYKNFNY
FT                   VLKYYGIKDKSKVNKIIEEKLKLVGLYDEVQDNLNISALKLSGGQQQRLCIGRALLPEP
FT                   EILLMDEPCSALDIKNTAIIEKLLLELKKKYTILIVTHNLAQAKRISDSTIFMLNGEVI
FT                   ESGKTEKVFNSPQNEETKNYISGIYG"
FT   misc_feature    457703..458275
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 192.6, E-value 6.4e-55"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    457724..457747
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    458051..458095
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        458491..458961
FT                   /transl_table=11
FT                   /locus_tag="CBO0388"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Methanopyrus kandleri had family
FT                   hydrolase, a mk0529 SWALL:Q8TXY0 (EMBL:AE010347) (158 aa)
FT                   fasta scores: E(): 4.9e-13, 35.03 38d in 157 aa"
FT                   /db_xref="GOA:A5HYT2"
FT                   /db_xref="InterPro:IPR023214"
FT                   /db_xref="InterPro:IPR036412"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT2"
FT                   /protein_id="CAL81941.1"
FT                   /translation="MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMSLDTKENLKKISEK
FT                   LKVYIITADTYGNVKKQCEGLPVSIETFPKGNATFYKKSFVEKLGPGETMVIGNGMNDI
FT                   EMFKVATLSIAVIGEEGCAGKLIVQSDIVVSSIEKVFFMIENTNRIVATLRD"
FT   CDS_pept        459448..460899
FT                   /transl_table=11
FT                   /locus_tag="CBO0389"
FT                   /product="putative amino acid permease"
FT                   /note="Similar to Oceanobacillus iheyensis cationic amino
FT                   acid transporter ob0489 SWALL:Q8ESX7 (EMBL:AP004594) (469
FT                   aa) fasta scores: E(): 1.8e-96, 51.68 38d in 476 aa"
FT                   /db_xref="GOA:A5HYT3"
FT                   /db_xref="InterPro:IPR002293"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT3"
FT                   /protein_id="CAL81942.1"
FT                   /translation="MSKENDVSSSDQNFERVLSKKDIMALAFGAMIGWGWVVLTGPWIQ
FT                   KAGSMGAILAFIIGGIVVLFVGLTYAELTSAMPKCGGDLVFSYRALGKKAAFICTWGII
FT                   LGYISVVAFEAVAFPSVLENLFSFSYLKGYMYTIAGYDIYASWALIGSISAIIITIVNY
FT                   FGAKPAAFMQTVVTVMIACVGIALFTGSLFNGSVQNMSPMFVTGTSGKGILAVAIMTPF
FT                   MYVGFDVIPQAAEEINVPFKKIGKILILSVIMAVVWYAMIIYSTSVALNSNEINSSSLV
FT                   AADAMKKMFGNSVAASKILILAGIGGILTSWNSFFMGGSRAIYSMAEAGMLPKFLAKIH
FT                   PKYKTPTNAIVLIGLVSSIAPFFGEKMLVWLSNAGGFGILISYLLVSISFLVLRKKEPN
FT                   MERPYKVKHPKFVGTMAIVLCIGMLLMFMPGLPSGLSWPYEWGIILAWFLLGGIFYLAA
FT                   ANKDFNESKRTKYKDDYYTNKKVSV"
FT   misc_feature    459511..460851
FT                   /note="Pfam match to entry PF00324 aa_permeases, Amino acid
FT                   permease, score 60.6, E-value 3.5e-15"
FT                   /inference="protein motif:Pfam:PF00324"
FT   misc_feature    order(459514..459582,459592..459660,459733..459801,
FT                   459874..459942,459955..460023,460081..460149,
FT                   460186..460254,460327..460395,460486..460539,
FT                   460552..460620,460678..460746,460756..460824)
FT                   /note="12 probable transmembrane helices predicted for
FT                   CBO0389 by TMHMM2.0 at aa 23-45, 49-71, 96-118,
FT                   143-165,170-192, 212-234, 247-269, 294-316, 347-364,
FT                   369-391,411-433 and 437-459"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(460965..461546)
FT                   /transl_table=11
FT                   /locus_tag="CBO0390"
FT                   /product="putative forespore-specific lipoprotein"
FT                   /note="Similar to Bacillus subtilis lipoprotein yhcn
FT                   precursor yhcn or bsu09150 SWALL:YHCN_BACSU (SWALL:P54598)
FT                   (189 aa) fasta scores: E(): 2e-08, 27.89 38d in 190 aa"
FT                   /db_xref="GOA:A5HYT4"
FT                   /db_xref="InterPro:IPR014247"
FT                   /db_xref="InterPro:IPR019076"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT4"
FT                   /protein_id="CAL81943.1"
FT                   /translation="MIKNNKKLLFTTGLLSLSLLLGTGCTNKSAKNPPANNATKNVTEK
FT                   ANENTANKNAANGNATNENAKDGTSTGENINGNTTVTDGDLSRRSQKIADELVKIKGIE
FT                   KARVVISERRALVGVTIPNSVEGKMTSDLKKKVDETVKKTDKEIDTVAVSADADVYDRI
FT                   TKIADGIKGGRGIQEFGTEFKELFNRIIPQ"
FT   sig_peptide     complement(461450..461546)
FT                   /locus_tag="CBO0390"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.521 between residues 31 and 32"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(461472..461504)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        461735..462559
FT                   /transl_table=11
FT                   /locus_tag="CBO0391"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00525 SWALL:Q898D7 (EMBL:AE015937) (279 aa) fasta
FT                   scores: E(): 5.4e-39, 47.6 38d in 250 aa"
FT                   /db_xref="InterPro:IPR030910"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT5"
FT                   /protein_id="CAL81944.1"
FT                   /translation="MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPI
FT                   KEGEINVAGIYAYDLGDKYEVKAYLRNGIEKQINFEEIPFKIINSKGELLASQTFDLKS
FT                   MGNIPSYCARPCVLYFDKKNVFVDKIPVDDWKLVFDNSLKAVRNLMVDIENLPEGIDAK
FT                   SKKVYTDFLEGLSDLKEGEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIR
FT                   DEKGNFVVSEVFELKDLKVSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI"
FT   repeat_region   462573..462602
FT                   /rpt_family="CB.6"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="gtgtctcaaaattaaatctatttttagaca"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        462637..463332
FT                   /transl_table=11
FT                   /locus_tag="CBO0392"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus anthracis hypothetical protein
FT                   ba0337 SWALL:Q81ZD2 (EMBL:AE017025) (235 aa) fasta scores:
FT                   E(): 3e-22, 31.35 38d in 236 aa"
FT                   /db_xref="InterPro:IPR002725"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT6"
FT                   /protein_id="CAL81945.1"
FT                   /translation="MKDIILMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYT
FT                   IEQVLKKEEKWIIKKIKKLKEVENFNGYYYLGELYYLKIKEVKSLYFKLEVDSNKFMVY
FT                   INSGVLKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSSILKVAPKNIVVKNQKTLWGS
FT                   CSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWL
FT                   KENGYKLKI"
FT   misc_feature    462670..463326
FT                   /note="Pfam match to entry PF01863 DUF45, Protein of
FT                   unknown function DUF45, score 110.1, E-value 4.6e-30"
FT                   /inference="protein motif:Pfam:PF01863"
FT   misc_feature    463195..463224
FT                   /note="PS00142 Neutral zinc metallopeptidases,zinc-binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00142"
FT   CDS_pept        463419..463757
FT                   /transl_table=11
FT                   /locus_tag="CBO0393"
FT                   /product="single-strand binding protein"
FT                   /note="Similar to Clostridium acetobutylicum single-strand
FT                   binding protein 1 Ssb1 or cac0945 SWALL:Q97KH4
FT                   (EMBL:AE007610) (110 aa) fasta scores: E(): 2.3e-17,47.66
FT                   38d in 107 aa"
FT                   /db_xref="GOA:A5HYT7"
FT                   /db_xref="InterPro:IPR000424"
FT                   /db_xref="InterPro:IPR011344"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT7"
FT                   /protein_id="CAL81946.1"
FT                   /translation="MNRVMLIGRLTKDAELKQIEDRDVSLLRFVIAVNRYYNKENSKTD
FT                   YIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNYEDKNGNKKYGIEIVSNEIKFLDPK
FT                   KIDKVVSN"
FT   misc_feature    463419..463457
FT                   /note="PS00735 Single-strand binding protein family
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00735"
FT   misc_feature    463419..463724
FT                   /note="Pfam match to entry PF00436 SSB, Single-strand
FT                   binding protein family, score 125.9, E-value 7.7e-35"
FT                   /inference="protein motif:Pfam:PF00436"
FT   CDS_pept        464010..464561
FT                   /transl_table=11
FT                   /locus_tag="CBO0394"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum predicted
FT                   membrane protein cac0950 SWALL:Q97KG9 (EMBL:AE007610) (183
FT                   aa) fasta scores: E(): 2.9e-32, 49.72 38d in 183 aa"
FT                   /db_xref="GOA:A5HYT8"
FT                   /db_xref="InterPro:IPR003810"
FT                   /db_xref="InterPro:IPR022929"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYT8"
FT                   /protein_id="CAL81947.1"
FT                   /translation="MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFF
FT                   QFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIVGILMITEGFKEKEESIFLNKIMYLI
FT                   LGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISS
FT                   YADYIGGIILILFGLKMLFF"
FT   misc_feature    order(464028..464087,464115..464183,464196..464264,
FT                   464307..464372,464391..464459,464487..464555)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0394 by TMHMM2.0 at aa 7-26, 36-58, 63-85,
FT                   100-121,128-150 and 160-182"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        464643..465059
FT                   /transl_table=11
FT                   /locus_tag="CBO0395"
FT                   /product="putative ferric uptake regulation protein"
FT                   /note="Similar to Campylobacter jejuni ferric uptake
FT                   regulation protein Fur or cj0400 SWALL:FUR_CAMJE
FT                   (SWALL:P48796) (157 aa) fasta scores: E(): 3.3e-08, 27.69
FT                   id in 130 aa, and to Bacillus subtilis peroxide operon
FT                   regulator PerR or bsu08730 SWALL:PERR_BACSU (SWALL:P71086)
FT                   (145 aa) fasta scores: E(): 4.8e-08, 30.76 38d in 130 aa"
FT                   /db_xref="GOA:A5HYT9"
FT                   /db_xref="InterPro:IPR002481"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYT9"
FT                   /protein_id="CAL81948.1"
FT                   /translation="MKKNNLKLTKGRINILSILIEATYSLDVESIFKKLKEKNVNLDLS
FT                   TIYRTLEVFENKDLIEKFDLGNSKYNFRFKRKKHTHTIQCKVCHKEVQIECPLFHLDEI
FT                   VNKETGFSNIDHHLKIEGVCENCVKYNCIKEKKH"
FT   misc_feature    464649..465005
FT                   /note="Pfam match to entry PF01475 FUR, Ferric uptake
FT                   regulator family, score 43.0, E-value 7.1e-10"
FT                   /inference="protein motif:Pfam:PF01475"
FT   misc_feature    464895..464912
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00190"
FT   CDS_pept        complement(465056..465403)
FT                   /transl_table=11
FT                   /locus_tag="CBO0396"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac0952 SWALL:Q97KG7 (EMBL:AE007610) (114 aa) fasta
FT                   scores: E(): 1.3e-08, 32.99 38d in 97 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU0"
FT                   /protein_id="CAL81949.1"
FT                   /translation="MKKKLILIICILFLLFLPLSYKYKIYKNKDLNYVVEQHMTHGLFN
FT                   KYKMHSINSLNLTFSDGNIAVVKVYGTSNSSPHKSISYNLFLTKSKNGAWKVKKTSENY
FT                   NYSKEKTPDAP"
FT   sig_peptide     complement(465337..465403)
FT                   /locus_tag="CBO0396"
FT                   /note="probabilty 0.871, with cleavage site probability
FT                   0.629 between residues 21 and 22"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        465674..466732
FT                   /transl_table=11
FT                   /locus_tag="CBO0397"
FT                   /product="putative metal dependent phosphohydrolase"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00529 SWALL:Q898D3 (EMBL:AE015937) (357 aa) fasta
FT                   scores: E(): 7.6e-85, 63.17 38d in 353 aa"
FT                   /db_xref="GOA:A5HYU1"
FT                   /db_xref="InterPro:IPR003607"
FT                   /db_xref="InterPro:IPR006674"
FT                   /db_xref="InterPro:IPR006675"
FT                   /db_xref="InterPro:IPR037522"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU1"
FT                   /protein_id="CAL81950.1"
FT                   /translation="MIMRLEFINRVKENDVLGRNIFSEDGQVLLKSGIKLTGNYIKKLK
FT                   NLGVFYIYIRDERLEDVVIDDPKLMELKQTTMKSMTDLMKNIHDFNGKSLKRSFNQVEE
FT                   MIDYIIDMGDVNRSLYDIKTYDNYTYIHSLDTCIMTTFIGLSSGLNEKELKDVGIGAIL
FT                   HDIGKTRISNKIINKKGPLTDDEFIEIKKHPIYGSEILKKDFTMSDTIIKIVEQHHERI
FT                   DGKGYPYGLKRNDISKYAKLVSICDVYDAISNDRCYRKKFTPNDAYELILSGSGTMFDE
FT                   NLVKSFKNTFAIYPLGCRIRLSNGEEGYVINQNKGFPDRPIIRIFRDSNMKRFGEINLL
FT                   KSPNLVIRSLVM"
FT   misc_feature    466058..466429
FT                   /note="Pfam match to entry PF01966 HD, HD domain, score
FT                   92.5, E-value 8.6e-25"
FT                   /inference="protein motif:Pfam:PF01966"
FT   CDS_pept        466869..467882
FT                   /transl_table=11
FT                   /locus_tag="CBO0398"
FT                   /product="putative membrane associated peptidase"
FT                   /note="Similar to Clostridium tetani conserved membrane
FT                   protein ctc00530 SWALL:Q898D2 (EMBL:AE015937) (345 aa)
FT                   fasta scores: E(): 3.5e-47, 48.22 38d in 338 aa"
FT                   /db_xref="GOA:A5HYU2"
FT                   /db_xref="InterPro:IPR022764"
FT                   /db_xref="InterPro:IPR035952"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU2"
FT                   /protein_id="CAL81951.1"
FT                   /translation="MIGIDNFIKDIIEKLMSTNNYNVMEINTNTGLESNWIAVKDKEDF
FT                   YNVLIFSSNFAIKNLDKEYIEEYIKSLFVDKPINLNIAILMDEEIDDSFINSLDSNLIK
FT                   DISFIVDYNNRNIVYAGEGTRSIVEDIVSVPEQRENIYYNENDANSNKKATITKIIIGI
FT                   NIFMYLITAFLSGSIFTSDIKVLIFLGAKVNSFINNGEYYRLITAMFLHGGLIHLALNM
FT                   YALNAIGPLVEIYFGKVKYLIIYFISGVLSSYFSYLFSSSVSIGASGAIFGILGATLII
FT                   AYTNRKKGGKEFLNNIISVIVVNLILGFSIPNVDNFGHIGGLIGGVIITLVLFFIR"
FT   misc_feature    order(467343..467411,467484..467552,467589..467642,
FT                   467652..467720,467745..467804,467817..467876)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0398 by TMHMM2.0 at aa 159-181, 206-228,
FT                   241-258,262-284, 293-312 and 317-336"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    467460..467879
FT                   /note="Pfam match to entry PF01694 Rhomboid, Rhomboid
FT                   family, score 169.1, E-value 7.5e-48"
FT                   /inference="protein motif:Pfam:PF01694"
FT   repeat_region   467867..467910
FT                   /rpt_family="CB.846"
FT                   /rpt_type=DIRECT
FT                   /rpt_unit_seq="tttttttatccgatgactacccgctctaatactcccatcttctt
FT                   "
FT                   /inference="ab initio prediction:REPuter"
FT   repeat_region   467879..467900
FT   CDS_pept        complement(468193..470247)
FT                   /transl_table=11
FT                   /locus_tag="CBO0399"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="Similar to Bacillus subtilis methyl-accepting
FT                   chemotaxis protein TlpB or bsu31230 SWALL:TLPB_BACSU
FT                   (SWALL:P39217) (662 aa) fasta scores: E(): 2.6e-40, 31.81
FT                   id in 682 aa"
FT                   /db_xref="GOA:A5HYU3"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="InterPro:IPR004089"
FT                   /db_xref="InterPro:IPR029151"
FT                   /db_xref="InterPro:IPR033479"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU3"
FT                   /protein_id="CAL81952.1"
FT                   /translation="MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIED
FT                   KMKFQTKAISENIEKSLLSHKKIAETLSKTVESSKDIMPKDTYKNIVGNFIKTNDETFG
FT                   TGIWFEPYKFNAKEKFFGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTASCVW
FT                   SKPYLDELSNITMVSTSAAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGKAILLD
FT                   KDGNYITNPNKSKIVKMNITKETENSLSTLGKEMLSNKKGTGTYKDGEVKKLVYYDSIP
FT                   ETGWIIALSIDQSEVTAPLKQLLIKSIAFILIALALIIIFILWFSNYLTKNINRVNIFS
FT                   ETISNGDLTKSLSIDSKDELGAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASA
FT                   EQTESASDQIAQSISDIATGSETQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMAT
FT                   YKKAEEGNITVSTAINKMKDIEESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLL
FT                   ALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSASAGSIGYIIKEVQSDITKVVNSMKI
FT                   ETNNVNEGIVIVQNTKSSFENILSSIDKVSREMQDVSAVVEEITASTETVVNSLEKIDS
FT                   IIKESSSNTQNVAASAEEQTAIMKEVAEVATKLSQMSLKLEKDINIFKI"
FT   misc_feature    complement(468196..469059)
FT                   /note="Pfam match to entry PF00015
FT                   MCPsignal,Methyl-accepting chemotaxis protein (MCP)
FT                   signaling domain, score 248.0, E-value 1.4e-71"
FT                   /inference="protein motif:Pfam:PF00015"
FT   misc_feature    complement(469120..469329)
FT                   /note="Pfam match to entry PF00672 HAMP, HAMP domain,score
FT                   50.6, E-value 3.6e-12"
FT                   /inference="protein motif:Pfam:PF00672"
FT   misc_feature    complement(order(469273..469341,470152..470220))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0399 by TMHMM2.0 at aa 10-32 and 303-325"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(469519..469761)
FT                   /note="Pfam match to entry PF02743 Cache, Cache
FT                   domain,score 54.7, E-value 2.1e-13"
FT                   /inference="protein motif:Pfam:PF02743"
FT   misc_feature    complement(469603..469626)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   sig_peptide     complement(470145..470247)
FT                   /locus_tag="CBO0399"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.488 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   repeat_region   complement(470682..470722)
FT   CDS_pept        complement(470844..472574)
FT                   /transl_table=11
FT                   /gene="ftsH"
FT                   /locus_tag="CBO0400"
FT                   /product="cell division protein"
FT                   /EC_number="3.4.24.-"
FT                   /note="Similar to Escherichia coli, and Shigella flexneri
FT                   cell division protein FtsH hflb or ftsh or MrsC or TolZ or
FT                   b3178 or sf3218 or s3436 SWALL:FTSH_ECOLI (SWALL:P28691)
FT                   (644 aa) fasta scores: E(): 8.6e-61, 38.8 38d in 585 aa"
FT                   /db_xref="GOA:A5HYU4"
FT                   /db_xref="InterPro:IPR000642"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR003959"
FT                   /db_xref="InterPro:IPR003960"
FT                   /db_xref="InterPro:IPR005936"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR037219"
FT                   /db_xref="InterPro:IPR041569"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU4"
FT                   /protein_id="CAL81953.1"
FT                   /translation="MNKIKNKIIILPLLTAFLSIAVMISLNFYSSKKTNKDYNEFLKDL
FT                   NAKKISTVYMTDTSTIKIKLNSNEIYETDNPRSINFKEDLLKKGVKISENSPMTPKEVI
FT                   PLSFLVLSVISIAFIGLKDSTIFKNKKLSSVDSLDADEVENIKLNFNSVAGNEEAKESV
FT                   KDIVDFLKNPEKYSSYGARMPKGIILYGDPGTGKTLMAKAVAGEAGVPFYAMSGSDFVQ
FT                   VYVGVGASRIRQLFKKARSKGKAVIFIDEIDAIGKKRSSEKAGGSEERDQTLNALLTEM
FT                   SGFNEKEGIIIMAATNRLDILDEALLRPGRFDRHIEVNLPDVVAREKILNLHLKNKPIG
FT                   NINIKDWAKKTAYFSGAKIENLLNEAAILACKENSVKIEDYHVDKAFSVVLAGYEKQNR
FT                   DYIKNKDKKITAYHEIGHALISSIVLPKEKISKVTIIPSTKGAGGYTLSIPEDSLYQSK
FT                   EYLRNRIMVLLGGRAAEEIIFGENHITTGAHNDLQRSTSIAYKMVTEYGMGETLGLLNM
FT                   GSLKHELSINENDIIKECKSLIDNIYKDVKNTLLKEKDQLDSLSEKLLEKETLYEEDFK
FT                   "
FT   misc_feature    complement(470847..471443)
FT                   /note="Pfam match to entry PF01434 Peptidase_M41,Peptidase
FT                   family M41, score 183.2, E-value 4.3e-52"
FT                   /inference="protein motif:Pfam:PF01434"
FT   misc_feature    complement(471318..471347)
FT                   /note="PS00142 Neutral zinc metallopeptidases,zinc-binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00142"
FT   misc_feature    complement(471459..472019)
FT                   /note="Pfam match to entry PF00004 AAA, ATPase family
FT                   associated with various cellular activities (AAA), score
FT                   280.1, E-value 2.9e-81"
FT                   /inference="protein motif:Pfam:PF00004"
FT   misc_feature    complement(471651..471707)
FT                   /note="PS00674 AAA-protein family signature."
FT                   /inference="protein motif:ProSite:PS00674"
FT   misc_feature    complement(471981..472004)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    complement(order(472212..472268,472488..472556))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0400 by TMHMM2.0 at aa 7-29 and 103-121"
FT                   /inference="protein motif:TMHMM:2.0"
FT   sig_peptide     complement(472481..472574)
FT                   /gene="ftsH"
FT                   /locus_tag="CBO0400"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.680 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        472794..473849
FT                   /transl_table=11
FT                   /locus_tag="CBO0401"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1451 SWALL:Q8XKE9 (EMBL:AP003190) (323 aa) fasta
FT                   scores: E(): 1.4e-30, 32.08 38d in 321 aa"
FT                   /db_xref="InterPro:IPR010652"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU5"
FT                   /protein_id="CAL81954.1"
FT                   /translation="MKVSSVKVTLTEIDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSY
FT                   TKGISIPFFAKLALGSVNNNTINIRIFKIKVMKLHIIDAIKKLALKLSLSNFKDYGIYV
FT                   KKENIKIDLDILSKKIPYTYFKIEKLNLYNGYVDVFVDNIVYAKENEKEEKEVKQEKFS
FT                   SNKKYKPIYKRKDNYSLTRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVK
FT                   TKTLVVSVLSYIVSPVDIIPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQG
FT                   NIIFLVKQVIGYISNIIGTENVKTLMKFANNIVGFIKEKYDGKSNLKAHKQENKAYEEV
FT                   ASVDEKSNNIH"
FT   CDS_pept        473824..474273
FT                   /transl_table=11
FT                   /gene="rnhA"
FT                   /gene_synonym="rnh"
FT                   /locus_tag="CBO0402"
FT                   /product="ribonuclease Hi"
FT                   /EC_number="3.1.26.4"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi ribonuclease Hi RnhA or Rnh or stm0263 or sty0284 or
FT                   t2602 SWALL:RNH_SALTY (SWALL:P23329) (155 aa) fasta scores:
FT                   E(): 7e-22, 48.25 38d in 143 aa"
FT                   /db_xref="GOA:A5HYU6"
FT                   /db_xref="InterPro:IPR002156"
FT                   /db_xref="InterPro:IPR012337"
FT                   /db_xref="InterPro:IPR022892"
FT                   /db_xref="InterPro:IPR036397"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYU6"
FT                   /protein_id="CAL81955.1"
FT                   /translation="MKKVIIYTDGACRGNGQENTIGAYGIVLMYGEHKKEIKKAFRDTT
FT                   NNIMELSAVVEALSLLKEPCSIELYSDSAYVINAINQKWLDNWKKNNWKTASKSPVKNK
FT                   ELWEKLDELLKKHSVKFIKVKGHSDNEYNNRCDKLANEAMDEFNV"
FT   misc_feature    473824..474258
FT                   /note="Pfam match to entry PF00075 rnaseH, RNase H, score
FT                   180.8, E-value 2.3e-51"
FT                   /inference="protein motif:Pfam:PF00075"
FT   CDS_pept        474336..474512
FT                   /transl_table=11
FT                   /locus_tag="CBO0403"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1449 SWALL:Q8XKF1 (EMBL:AP003190) (53 aa) fasta
FT                   scores: E(): 0.0001, 45.28 38d in 53 aa"
FT                   /db_xref="GOA:A5HYU7"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU7"
FT                   /protein_id="CAL81956.1"
FT                   /translation="MNNRFLSGIAAGAILGATAGMLIVPQLDRGTRRRIKRTSRTMMGM
FT                   AGNMMGNMRGIMR"
FT   sig_peptide     474336..474420
FT                   /locus_tag="CBO0403"
FT                   /note="probabilty 0.931, with cleavage site probability
FT                   0.403 between residues 29 and 30"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    474348..474416
FT                   /note="1 probable transmembrane helix predicted for CBO0403
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        474693..475997
FT                   /transl_table=11
FT                   /locus_tag="CBO0404"
FT                   /product="putative transcriptional regulator"
FT                   /note="Similar to Bacillus stearothermophilus
FT                   transcriptional activator NprA SWALL:NPRA_BACST
FT                   (SWALL:P43130) (406 aa) fasta scores: E(): 5.8e-06, 19.61
FT                   id in 413 aa, and to Bacillus subtilis response regulator
FT                   aspartate phosphatase A RapA or GsiaA or spo0l or bsu12430
FT                   SWALL:RAPA_BACSU (SWALL:Q00828) (378 aa) fasta scores: E():
FT                   0.0019, 21.46 38d in 368 aa"
FT                   /db_xref="GOA:A5HYU8"
FT                   /db_xref="InterPro:IPR001387"
FT                   /db_xref="InterPro:IPR010982"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU8"
FT                   /protein_id="CAL81957.1"
FT                   /translation="MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPS
FT                   MDLLEYLAETLNTSIEYFMESEDTQAEKICKYYENIAESHIINDNLNIAEQYIEKSLYY
FT                   AEKYNLEYRKARNLYLRGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVNLGK
FT                   ITIFLKAYHSSCSYFQQAEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYL
FT                   AKEKYRQLNNKKEYANSLLLLSQQYSEKGEMDRAIKYSEKALNIFKEVDDVLYTSKIEN
FT                   NLGKLFYEFDNLEESFIHFNRAKEIRESNKDPLLLETLINICENYIKQKDIHNCKLILD
FT                   EIMNNLENGNEIALVDYYLLRHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISI
FT                   IIGKFYIDNGNDKEAAKYLNEGVEMFKEVGLLKDM"
FT   misc_feature    474720..474881
FT                   /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix,
FT                   score 42.7, E-value 8.9e-10"
FT                   /inference="protein motif:Pfam:PF01381"
FT   misc_feature    474915..475016
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   2.9, E-value 1.7"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    475281..475382
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   11.6, E-value 0.16"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    475401..475502
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   6.4, E-value 0.66"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    475521..475622
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   13.6, E-value 0.091"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    475875..475976
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   1.6, E-value 2.4"
FT                   /inference="protein motif:Pfam:PF00515"
FT   CDS_pept        476029..477282
FT                   /transl_table=11
FT                   /locus_tag="CBO0405"
FT                   /product="putative transcriptional regulator"
FT                   /note="Similar to Bacillus thuringiensis transcriptional
FT                   activator NprR nprR SWALL:Q9AQ53 (EMBL:AF220563) (425 aa)
FT                   fasta scores: E(): 0.00056, 21.33 38d in 436 aa, and to
FT                   Bacillus subtilis response regulator aspartate phosphatase
FT                   B RapB or SpoOP or bsu36690 SWALL:RAPB_BACSU (SWALL:P70962)
FT                   (377 aa) fasta scores: E(): 0.014, 20.15 id in 377 aa"
FT                   /db_xref="GOA:A5HYU9"
FT                   /db_xref="InterPro:IPR001387"
FT                   /db_xref="InterPro:IPR010982"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYU9"
FT                   /protein_id="CAL81958.1"
FT                   /translation="MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIKPD
FT                   DEILKIISEELEIDIKYLKAGVKEQLLDNIDKLKDNKNSSDYEKILEYNLKYAEEYKYY
FT                   HIAFYIIHMLFNYYLENSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFETKE
FT                   YIEAASYYRSIRKIAHEKNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLD
FT                   NNIKKAEVYKILAILSLRLDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEK
FT                   DKGISYINKALDLYPKNNTRAFVSFMLDTMKVLLKNDVLYRAQEISDEILNYAIKINNI
FT                   RFIEKAYYYKAIILEKQGSLDTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQ
FT                   VGESIKYFNLAIKLSKKL"
FT   misc_feature    476470..476571
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   2.6, E-value 1.8"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    476821..476922
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   8.5, E-value 0.36"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    477058..477159
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   1.2, E-value 2.7"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    477178..477279
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   20.8, E-value 0.0035"
FT                   /inference="protein motif:Pfam:PF00515"
FT   repeat_region   complement(477365..477517)
FT   CDS_pept        477596..477733
FT                   /transl_table=11
FT                   /locus_tag="CBO0406"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV0"
FT                   /protein_id="CAL81959.1"
FT                   /translation="MVLLFLIITVIFKEIQGLKYFINRNKEMDKKLDIIISKLENKQNN
FT                   "
FT   CDS_pept        477764..478369
FT                   /transl_table=11
FT                   /locus_tag="CBO0407"
FT                   /product="putative hydratase"
FT                   /note="Similar to Pseudomonas putida isonitrile hydratase
FT                   InhA SWALL:Q8G9F9 (EMBL:AB088117) (228 aa) fasta scores:
FT                   E(): 1.4e-14, 30.27 38d in 185 aa, and to Pseudomonas
FT                   aurantiaca DarS SWALL:Q84H27 (EMBL:AY135187) (228 aa) fasta
FT                   scores: E(): 1.5e-13, 29.03 38d in 186 aa"
FT                   /db_xref="InterPro:IPR002818"
FT                   /db_xref="InterPro:IPR029062"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV1"
FT                   /protein_id="CAL81960.1"
FT                   /translation="MRYRVDILLFDKFETLDVFGPVEILGSVPDTFKLNFISLKGGIVE
FT                   SSQNVRIDTNLYTNEKNIEKILLVPGGIGTREKVDDNNFINFIENISNQSKYIISICTG
FT                   SALLAKTGILNGKKATTNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGMDMA
FT                   LGFIADIIGKTKALEISQRIEYFWNEDSKYDPFSKMYE"
FT   misc_feature    477860..478276
FT                   /note="Pfam match to entry PF01965 DJ-1_PfpI, DJ-1/PfpI
FT                   family, score 38.6, E-value 1.5e-08"
FT                   /inference="protein motif:Pfam:PF01965"
FT   CDS_pept        478574..479500
FT                   /transl_table=11
FT                   /locus_tag="CBO0408"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc02189 SWALL:Q892B6 (EMBL:AE015943) (314 aa) fasta
FT                   scores: E(): 1.3e-78, 69.8 38d in 308 aa"
FT                   /db_xref="InterPro:IPR021328"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV2"
FT                   /protein_id="CAL81961.1"
FT                   /translation="MLSRREFIRQSLELHLFFGRIMKEHSFFLQIGFTPKDSRLMQQAN
FT                   AFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFTLKAEMASAYFTGVNIPIRLTEVE
FT                   TGLMGDSSTKVNPMLEEKVSMLNQRAMGLTRALAQFKTKILSDVICCRIFTVNYPLLID
FT                   HILREAKFYFQLVRRLQNREEINLEKEAYEQETFWNRIMAEHSKFIRGLLDPTEDELIK
FT                   TANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATIEIKKFKAQGTQGLVECKIKSI
FT                   IIPLLGDHTLREANHYLRLLKIFEKSE"
FT   CDS_pept        479864..482464
FT                   /transl_table=11
FT                   /gene="clpB"
FT                   /gene_synonym="htpM"
FT                   /locus_tag="CBO0409"
FT                   /product="heat shock protein"
FT                   /note="Similar to Escherichia coli, Escherichia coli O6,and
FT                   Escherichia coli O157:H7 ClpB protein ClpB or HtpM or b2592
FT                   or c3114 or z3886 or ecs3455 SWALL:CLPB_ECOLI
FT                   (SWALL:P03815) (857 aa) fasta scores: E(): 5.3e-137,51.74
FT                   38d in 862 aa, and to Synechococcus sp. ClpB protein clpB
FT                   SWALL:CLPB_SYNP7 (SWALL:P53533) (883 aa) fasta scores: E():
FT                   6.9e-152, 58.66 38d in 866 aa"
FT                   /db_xref="GOA:A5HYV3"
FT                   /db_xref="InterPro:IPR001270"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR003959"
FT                   /db_xref="InterPro:IPR004176"
FT                   /db_xref="InterPro:IPR017730"
FT                   /db_xref="InterPro:IPR018368"
FT                   /db_xref="InterPro:IPR019489"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR028299"
FT                   /db_xref="InterPro:IPR036628"
FT                   /db_xref="InterPro:IPR041546"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV3"
FT                   /protein_id="CAL81962.1"
FT                   /translation="MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGL
FT                   IPNILGKMGVNIRDINAETNRVLDNMPKVLGEGAQSSSVYPTRRFEEVFVRAEQIAKDF
FT                   KDSYISVEHVLLAIMDVDRNTVLPILEKFGVKKSEFLKALSAVRGSQRVDNQDPEGTYE
FT                   ALVKYGRNLVEEAKKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEG
FT                   LAERIVRGDVQESLKNKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFI
FT                   DEIHTIVGAGKTEGSMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPV
FT                   ITDEPTIEDTVSILRGLKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLID
FT                   EACAMIRTDIDSMPTEMDSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEK
FT                   DKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREI
FT                   EEKEKLIKENSNGNAMLKEEVTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETR
FT                   VIGQGEAVKAVTNAVIRARAGLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN
FT                   IIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVF
FT                   NIFLQILDDGRLTDNKGKVIDFKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEAL
FT                   KARFKPEFLNRVDDIIMFKPLTVEDIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMA
FT                   KEGYDPIYGARPLKRYIEDTIETEIAKQIIVGNIYEGTTVGVDLKGESIVIERI"
FT   misc_feature    479912..480070
FT                   /note="Pfam match to entry PF02861 Clp_N, Clp amino
FT                   terminal domain, score 59.4, E-value 8.3e-15"
FT                   /inference="protein motif:Pfam:PF02861"
FT   misc_feature    480152..480310
FT                   /note="Pfam match to entry PF02861 Clp_N, Clp amino
FT                   terminal domain, score 58.9, E-value 1.2e-14"
FT                   /inference="protein motif:Pfam:PF02861"
FT   misc_feature    480476..481060
FT                   /note="Pfam match to entry PF00004 AAA, ATPase family
FT                   associated with various cellular activities (AAA), score
FT                   58.7, E-value 1.4e-14"
FT                   /inference="protein motif:Pfam:PF00004"
FT   misc_feature    480491..480514
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    480755..480793
FT                   /note="PS00870 Chaperonins clpA/B signature 1."
FT                   /inference="protein motif:ProSite:PS00870"
FT   misc_feature    481682..482341
FT                   /note="Pfam match to entry PF00004 AAA, ATPase family
FT                   associated with various cellular activities (AAA), score
FT                   5.0, E-value 0.00014"
FT                   /inference="protein motif:Pfam:PF00004"
FT   misc_feature    481697..481720
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    481775..481831
FT                   /note="PS00871 Chaperonins clpA/B signature 2."
FT                   /inference="protein motif:ProSite:PS00871"
FT   repeat_region   482500..482729
FT   repeat_region   complement(482535..482564)
FT   repeat_region   complement(482640..482712)
FT   repeat_region   482657..482729
FT   CDS_pept        complement(482810..483538)
FT                   /transl_table=11
FT                   /locus_tag="CBO0410"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum cobyric acid
FT                   synthase CobQ cac0961 SWALL:Q97KF8 (EMBL:AE007611) (243 aa)
FT                   fasta scores: E(): 8.8e-72, 77.08 38d in 240 aa"
FT                   /db_xref="GOA:A5HYV4"
FT                   /db_xref="InterPro:IPR011698"
FT                   /db_xref="InterPro:IPR017929"
FT                   /db_xref="InterPro:IPR029062"
FT                   /db_xref="InterPro:IPR033949"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV4"
FT                   /protein_id="CAL81963.1"
FT                   /translation="MELNICHLYPDLLNVYGDIGNILVLKYRAEQRGIKINVSNVSIKD
FT                   NFPIDKYDIALFGGGQDYEQSIVSKDMLETKKDDLTKYIEKGKVLLAICGGYQLLGKYY
FT                   TTPEGEKLDGLDILDIYTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLKPLG
FT                   KVIAGYGNNGEDQEEGCIYKSTFCTYFHGSLLSKNPELADRLLSTALKNKYGEDINLEP
FT                   LDDNLEIKAKEFIIHRESKA"
FT   CDS_pept        complement(483596..484957)
FT                   /transl_table=11
FT                   /locus_tag="CBO0411"
FT                   /product="Mur ligase family protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   udp-N-acetylmuramyl tripeptide synthetase cac0962
FT                   SWALL:Q97KF7 (EMBL:AE007611) (435 aa) fasta scores: E():
FT                   2.2e-112, 64.76 38d in 437 aa"
FT                   /db_xref="GOA:A5HYV5"
FT                   /db_xref="InterPro:IPR013221"
FT                   /db_xref="InterPro:IPR013564"
FT                   /db_xref="InterPro:IPR018109"
FT                   /db_xref="InterPro:IPR036565"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV5"
FT                   /protein_id="CAL81964.1"
FT                   /translation="MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKIL
FT                   KTVAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSF
FT                   NNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKS
FT                   PNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYE
FT                   FLTYNHLGSYYCENCGYKRPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNA
FT                   LCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTI
FT                   VLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIA
FT                   GLPNEKFKISQNHDDLLEDIKSCREETVYILATYTAMTSFRKFLNSKGYIKKLW"
FT   misc_feature    complement(484517..484825)
FT                   /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase
FT                   family, catalytic domain, score 35.3, E-value 3e-10"
FT                   /inference="protein motif:Pfam:PF01225"
FT   CDS_pept        485222..486202
FT                   /transl_table=11
FT                   /locus_tag="CBO0412"
FT                   /product="mannose-6-phosphate isomerase"
FT                   /EC_number="5.3.1.8"
FT                   /note="Similar to Streptococcus mutans mannose-6-phosphate
FT                   isomerase Pmi or ManA or smu.1839 SWALL:MANA_STRMU
FT                   (SWALL:Q59935) (316 aa) fasta scores: E(): 1.1e-29, 35.25
FT                   id in 312 aa"
FT                   /db_xref="GOA:A5HYV6"
FT                   /db_xref="InterPro:IPR001250"
FT                   /db_xref="InterPro:IPR011051"
FT                   /db_xref="InterPro:IPR014628"
FT                   /db_xref="InterPro:IPR014710"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV6"
FT                   /protein_id="CAL81965.1"
FT                   /translation="MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLI
FT                   SVIKNGKLKGKTLKDAIELYKNKLMGDCIFDKYKDFPLLLKIISAEKKLSIQVHPGEKD
FT                   FLDLKESPKKEAWYVMEAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKKGDI
FT                   FYIDSGMIHAIGKGVTLIEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSG
FT                   LKVQLKNCNKTYCFLSEAFAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQN
FT                   LSRGDSILIPAYMGDYTLRGNMNLLKFYIPDIEKSINSIVNIIKC"
FT   misc_feature    485231..486055
FT                   /note="Pfam match to entry PF01238 PMI_typeI,Phosphomannose
FT                   isomerase type I, score -42.3, E-value 8.5e-08"
FT                   /inference="protein motif:Pfam:PF01238"
FT   CDS_pept        486551..487666
FT                   /transl_table=11
FT                   /locus_tag="CBO0413"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00544 SWALL:Q898B9 (EMBL:AE015937) (381 aa) fasta
FT                   scores: E(): 8.2e-56, 44.75 38d in 362 aa"
FT                   /db_xref="InterPro:IPR038765"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV7"
FT                   /protein_id="CAL81966.1"
FT                   /translation="MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFY
FT                   EGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIK
FT                   TEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMV
FT                   SEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMER
FT                   YFYSYTIGIDNNIHDGVKSNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKI
FT                   EYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVNTI
FT                   FELKLKEGQNSIKLSENGKDAVREVIVNYKK"
FT   sig_peptide     486551..486641
FT                   /locus_tag="CBO0413"
FT                   /note="probabilty 0.985, with cleavage site probability
FT                   0.381 between residues 31 and 32"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    486569..486628
FT                   /note="1 probable transmembrane helix predicted for CBO0413
FT                   by TMHMM2.0 at aa 7-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    486599..486631
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        487774..488628
FT                   /transl_table=11
FT                   /gene="upk2"
FT                   /locus_tag="CBO0414"
FT                   /product="putative undecaprenol kinase"
FT                   /EC_number="2.7.1.66"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 putative undecaprenol kinase Upk or BacA or b3057
FT                   or z4410 or ecs3940 SWALL:UPK_ECOLI (SWALL:P31054) (273 aa)
FT                   fasta scores: E(): 3.1e-39, 44.08 38d in 279 aa"
FT                   /note="also similar to CBO0320 (51.056 38d)"
FT                   /db_xref="GOA:A5HYV8"
FT                   /db_xref="InterPro:IPR003824"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV8"
FT                   /protein_id="CAL81967.1"
FT                   /translation="MLLILKAIIIGIVEGITEFLPVSSTGHMIIAGSLIGFDGTVYRKA
FT                   YTDMFSVVIQLGAILAVVVLYWDKIISTLKNFFPSDRVPVKKCGLKFWINIVIASIPAA
FT                   VIGIPFNDKIEEKLFYPLPVTIALIVGAIWMIYAENRYRNNSKVISIDDVNAKQAIIIG
FT                   VFQCLALWPGMSRSASTIIGAWIVGLSTVAAAEFSFFLAIPAMIGASGMSLIKHNVFST
FT                   CSSIELIALAAGFIVSFVVALVVIDKFIAFLKKKPMKVFAIYRIVLGIVLIILIYTNII
FT                   TWH"
FT   misc_feature    487789..488589
FT                   /note="Pfam match to entry PF02673 BacA, Bacitracin
FT                   resistance protein BacA, score 352.0, E-value 6.9e-103"
FT                   /inference="protein motif:Pfam:PF02673"
FT   misc_feature    order(487816..487884,487921..487989,488047..488106,
FT                   488125..488184,488314..488382,488443..488511,
FT                   488554..488622)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0414 by TMHMM2.0 at aa 15-37, 50-72, 92-111,
FT                   118-137,181-203, 224-246 and 261-283"
FT                   /inference="protein motif:TMHMM:2.0"
FT   rRNA            489065..490506
FT                   /gene="16S rRNA"
FT                   /product="16S ribosomal RNA"
FT   tRNA            490683..490758
FT                   /gene="tRNA Ala (TGC)"
FT                   /note="Cove score 93.93"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   tRNA            490764..490840
FT                   /gene="tRNA Ile (GAT)"
FT                   /note="Cove score 99.73"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   rRNA            490914..493815
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   rRNA            493948..494064
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   tRNA            494073..494147
FT                   /gene="tRNA Asn (GTT)"
FT                   /note="Cove score 80.23"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        complement(494523..495386)
FT                   /transl_table=11
FT                   /locus_tag="CBO0415"
FT                   /product="metallo beta-lactamase superfamily lipoprotein"
FT                   /note="Similar to Clostridium tetani come-like
FT                   protein,metallo beta-lactamase superfamily hydrolase
FT                   ctc00821 SWALL:Q897B9 (EMBL:AE015938) (304 aa) fasta
FT                   scores: E(): 6.5e-49, 48.95 38d in 288 aa"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="InterPro:IPR035681"
FT                   /db_xref="InterPro:IPR036866"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYV9"
FT                   /protein_id="CAL81968.1"
FT                   /translation="MKLKKKNLIITCLLIFLSIVFTACSQQSSNAVNTSNKSNELKVHY
FT                   IDVGQGDSILVQTKDKNILIDAGTRKSSDNLISYLKKQHIKKLDYVIATHPHEDHIGGM
FT                   PKVIEEFEISNFYAPKKTANTKIFKDMILQLKKKNLKINVAKKGISLDLSNNSSLDFLA
FT                   PVKDNYENTNDSSAVVKLTHGNTKFLFTGDAEKTSEKDILNSNEDLSSNVLKVGHHGSH
FT                   SSSSKEFLDKINPKIAIISCGKNNDYGHPHKETMKELNKRNIEVYRTDIDGNIVLTSDG
FT                   ENIKKN"
FT   misc_feature    complement(494655..495239)
FT                   /note="Pfam match to entry PF00753
FT                   lactamase_B,Metallo-beta-lactamase superfamily, score 74.2,
FT                   E-value 2.8e-19"
FT                   /inference="protein motif:Pfam:PF00753"
FT   sig_peptide     complement(495290..495386)
FT                   /locus_tag="CBO0415"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.745 between residues 31 and 32"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(495315..495347)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS_pept        495523..496245
FT                   /transl_table=11
FT                   /locus_tag="CBO0416"
FT                   /product="probable acyltransferase"
FT                   /note="Similar to Escherichia coli
FT                   1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC or ParF
FT                   or b3018 SWALL:PLSC_ECOLI (SWALL:P26647) (245 aa) fasta
FT                   scores: E(): 1.9e-09, 28.8 38d in 184 aa, and to
FT                   Clostridium tetani putative 1-acyl-sn-glycerol-3-phosphate
FT                   acyltransferase ctc00551 SWALL:Q898B3 (EMBL:AE015937) (242
FT                   aa) fasta scores: E(): 3.9e-41, 45.57 38d in 237 aa"
FT                   /db_xref="GOA:A5HYW0"
FT                   /db_xref="InterPro:IPR002123"
FT                   /db_xref="InterPro:IPR004552"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW0"
FT                   /protein_id="CAL81969.1"
FT                   /translation="MKSLIFYLGFALYMLLSLLRIIKLKHLKRKGNKEEIDRYINKSVV
FT                   GWAKFIVNGIGIKINKKGLENVPDGPCLFVGNHQGLLDVPVIVSSLDRYVGFVAKKEML
FT                   KLKILTYWMKEMKCVFMDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENLGEF
FT                   KKGSMKLGIKAGVPIVPIAIDGTYNVLEANGKKIKAADVDLIICPPIYPNELSKEEQNN
FT                   LSVTIKDVIQKELEKTRN"
FT   misc_feature    495532..495588
FT                   /note="1 probable transmembrane helix predicted for CBO0416
FT                   by TMHMM2.0 at aa 4-22"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    495694..496074
FT                   /note="Pfam match to entry PF01553
FT                   Acyltransferase,Acyltransferase, score 132.4, E-value
FT                   8.8e-37"
FT                   /inference="protein motif:Pfam:PF01553"
FT   repeat_region   496253..496282
FT                   /rpt_family="CB.102"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="gtgtctcaaaataaatttaattttgagaca"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        496993..498351
FT                   /transl_table=11
FT                   /locus_tag="CBO0417"
FT                   /product="putative 2-isopropylmalate synthase"
FT                   /note="Similar to Streptomyces hygroscopicus
FT                   2-phosphinomethylmalic acid synthase PmmS SWALL:Q9LCB4
FT                   (EMBL:AB029822) (440 aa) fasta scores: E(): 3.5e-55,38.53
FT                   38d in 436 aa, and to Salmonella typhimurium
FT                   2-isopropylmalate synthase LeuA or stm0113 SWALL:LEU1_SALTY
FT                   (SWALL:P15875) (522 aa) fasta scores: E(): 7.1e-10, 25.91
FT                   38d in 355 aa"
FT                   /db_xref="GOA:A5HYW1"
FT                   /db_xref="InterPro:IPR000891"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW1"
FT                   /protein_id="CAL81970.1"
FT                   /translation="MVKIVKSSYNHVLQNISSPNLYKDLFPYDEIPKVTFNDIQVPMDL
FT                   PKDIWITDTTFRDGQQSMPPYTTEQIVKIYDYLHKLDNESGVIRQTEFFLYSEKDRKAA
FT                   EICLDRGYKFPEVTSWIRASKEDFKLVKEMGIKETGMLMSCSDYHIFKKLNTTREKAMS
FT                   MYLEIAEEALANGIVPRCHLEDITRADFYGFVVPFVNKLMELSNKANIPIKIRACDTLG
FT                   LGVPYSGASLPRSVQGIIHGLRYCCNVPSERIEWHGHNDFYGVVANASTSWLYGCSSVN
FT                   TSLLGIGERTGNCPLEAMIIEYGQLKGNTANMNLHVINEIAEYFEREMNYNIPSRTPFV
FT                   GSEFNVTRAGIHADGILKNEEIYNIFNTEKILDRPVVVAVNQYSGLAGIAAWINTYFKL
FT                   KGENKIDKKDERIVAIKEWVDNQYENGRTTIIGNNELEVIVKQLIPDLFRRAS"
FT   misc_feature    497155..498015
FT                   /note="Pfam match to entry PF00682 HMGL-like,
FT                   HMGL-like,score 22.0, E-value 5.4e-10"
FT                   /inference="protein motif:Pfam:PF00682"
FT   CDS_pept        498495..500420
FT                   /transl_table=11
FT                   /locus_tag="CBO0418"
FT                   /product="putative aconitase"
FT                   /note="Similar to Clostridium acetobutylicum aconitase a
FT                   cac0971 SWALL:Q97KE8 (EMBL:AE007613) (642 aa) fasta scores:
FT                   E(): 4e-183, 76.01 38d in 642 aa"
FT                   /db_xref="GOA:A5HYW2"
FT                   /db_xref="InterPro:IPR000573"
FT                   /db_xref="InterPro:IPR001030"
FT                   /db_xref="InterPro:IPR006250"
FT                   /db_xref="InterPro:IPR015928"
FT                   /db_xref="InterPro:IPR015931"
FT                   /db_xref="InterPro:IPR018136"
FT                   /db_xref="InterPro:IPR036008"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW2"
FT                   /protein_id="CAL81971.1"
FT                   /translation="MSLTLTEKIIKSHLVKGNMTKGEEIAIKIDNTLTQDSTGTMAYLQ
FT                   FEALGIDKVKTKRSVAYIDHNMLQSGPENADDHLYIQTVAKKHGIYFSKPGNGICHQVN
FT                   LERFGVPGETLLGSDSHTPTGGGIGMLAIGAGGLDVAVAMAGGEYYINMPKVVKVNLIG
FT                   KLKPFVSAKDIILEVLRRLSVKGGVGKIFEYTGEGVKALTVPERATITNMGAELGATTS
FT                   IFPSDEITKDFLKAQEREEDYKYLVADEDAFYDEELEINLSDLKPLAACPHSPDNIVPV
FT                   SELKNIKVNQVAIGSCTNSSYRDMLRTASILKGKTVSENVSLVIAPGSKQVLNMMANNG
FT                   ALTDLVMAGARILECACGPCIGMGQSPCTDAVSLRTFNRNFEGRSGTKSADVYLVSPEV
FT                   AAVSALTGYITDPTELTDFEDIEMPNKFLINDNLIIEPATEGEVVEVKRGPNIKPFPKA
FT                   EALKELVTGKALTKVGDNITTDHIMPSNAKLLPYRSNVPYLSNFCLTPCDEKFPEKAKE
FT                   NGGGIIVAGTNYGQGSSREHAALAPVYLGIKAVLAKSFARIHKANLINNGILPLVFERE
FT                   EDYDSIDEMDELVIENVLNQVEIGKIDIINKTKSIKYKTLLEATDRQKKMILKGGLLNL
FT                   IKSSQQ"
FT   misc_feature    498504..499715
FT                   /note="Pfam match to entry PF00330 aconitase, Aconitase
FT                   family (aconitate hydratase), score 388.1, E-value
FT                   9.1e-114"
FT                   /inference="protein motif:Pfam:PF00330"
FT   misc_feature    499359..499409
FT                   /note="PS00450 Aconitase family signature 1."
FT                   /inference="protein motif:ProSite:PS00450"
FT   misc_feature    499419..499442
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    499539..499580
FT                   /note="PS01244 Aconitase family signature 2."
FT                   /inference="protein motif:ProSite:PS01244"
FT   misc_feature    499866..500321
FT                   /note="Pfam match to entry PF00694 Aconitase_C, Aconitase
FT                   C-terminal domain, score 75.0, E-value 1.6e-19"
FT                   /inference="protein motif:Pfam:PF00694"
FT   CDS_pept        500453..501454
FT                   /transl_table=11
FT                   /locus_tag="CBO0419"
FT                   /product="isocitrate dehydrogenase"
FT                   /note="Similar to Coccidioides immitis isocitrate
FT                   dehydrogenase IcdH SWALL:Q8X1D0 (EMBL:AF439265) (347 aa)
FT                   fasta scores: E(): 2e-58, 51.35 38d in 333 aa"
FT                   /db_xref="GOA:A5HYW3"
FT                   /db_xref="InterPro:IPR019818"
FT                   /db_xref="InterPro:IPR024084"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW3"
FT                   /protein_id="CAL81972.1"
FT                   /translation="MMKHNITLIPGDGIGPEVTEAARKVIDAVGADINWHVVEAGEKVL
FT                   DKYKTPLPNYVLDSIKETKVALKGPVTTPVGKGFRSVNVTLRKSLNLYANIRPVKSYKG
FT                   IKSRYENVDLIIVRENTEDLYAGIEHMIGDDIAESIKVITKKASDRIVDYAFDMARKEN
FT                   RNKVTAVHKANIMKLSDGLFLNCAKEVASKNKDIDFEDVIVDAMAMKLVLNPEKYDVLV
FT                   MPNLYGDILSDMAAGLVGGLGLLPGANIGYEGAVFEAAHGAAPDIAGKNKANPTACILS
FT                   GAMMLNYIGENEKAKKIENAIEKVFVEGKCLTEDLGGSSTTEEFTKAIIENL"
FT   misc_feature    500465..501439
FT                   /note="Pfam match to entry PF00180
FT                   isodh,Isocitrate/isopropylmalate dehydrogenase, score
FT                   532.9,E-value 2.3e-157"
FT                   /inference="protein motif:Pfam:PF00180"
FT   misc_feature    501125..501184
FT                   /note="PS00470 Isocitrate and isopropylmalate
FT                   dehydrogenases signature."
FT                   /inference="protein motif:ProSite:PS00470"
FT   CDS_pept        501763..502488
FT                   /transl_table=11
FT                   /locus_tag="CBO0420"
FT                   /product="probable amino acid ABC transporter, ATP binding
FT                   protein"
FT                   /note="Similar to Bacillus subtilis glutamine ABC
FT                   transporter GlnQ SWALL:O34677 (EMBL:Z99117) (242 aa) fasta
FT                   scores: E(): 4.9e-46, 56.84 38d in 241 aa, and to
FT                   Corynebacterium glutamicum glutamate transport ATP-binding
FT                   protein GluA or cgl1950 SWALL:GLUA_CORGL (SWALL:P48243)
FT                   (242 aa) fasta scores: E(): 2.1e-43, 56.01 38d in 241 aa"
FT                   /db_xref="GOA:A5HYW4"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR030679"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW4"
FT                   /protein_id="CAL81973.1"
FT                   /translation="MIETKNIKKTFGNLMVFEDLNLKIKKGEVVVIIGSSGSGKSTFLR
FT                   CLNALEEINDGIIEIEGKILNSKDKKSMKELCSKMGMVFQNFNLFPHMTALDNVMIGPL
FT                   VSKKENKEKVLKIAKNLLKKVGLEDKMDYYPSKLSGGQKQRIAIARALAMNPDIMLFDE
FT                   PTSALDPELVGEVLSVMKKLAEEGITMVVVTHEMGFAKEVADRVIFMDGGKFVEEASPD
FT                   VFFTCPKEERTKEFLKKVL"
FT   misc_feature    501841..502401
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 228.1, E-value 1.4e-65"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    501862..501885
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    502174..502218
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   misc_binding    502671..502845
FT                   /locus_tag="CBO0421"
FT                   /bound_moiety="lysine"
FT                   /note="Lysine riboswitch"
FT   CDS_pept        503006..504772
FT                   /transl_table=11
FT                   /locus_tag="CBO0421"
FT                   /product="putative Na+/H+ antiporter"
FT                   /note="Similar to Clostridium tetani na+/h+ antiporter
FT                   ctc00567 SWALL:Q898A2 (EMBL:AE015937) (586 aa) fasta
FT                   scores: E(): 2.1e-158, 70.1 38d in 572 aa"
FT                   /db_xref="GOA:A5HYW5"
FT                   /db_xref="InterPro:IPR018461"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW5"
FT                   /protein_id="CAL81974.1"
FT                   /translation="MKKNRGVLLTFSFVLMILLFNNMSVLAADLDPKVVAENASRLGIW
FT                   TILPPVIAIVLAFITKNVVISLALGVFSGSFLLQLNGNNIFGASFKAFLDFINRILNSL
FT                   ADPWNAGIILQCMVIGGLIAVISKMGGAKAVAESLAKKARTPKSAQIITWFLGLLVFFD
FT                   DYANALIVGPIMRPVADKMKISREKLAFIIDGTAAPIAGIAVISTWIGYEISLIKDAYA
FT                   SIGQSVNAYGLFLSTIPYRFYNILILAFIVLIALMGRDFGPMLKAERRARTTGKLLSDT
FT                   AKPMVSEESTELEPREGIKLNIWNAIIPIAILIIGAFAGFYYNGYQAIMGGEDKALIQM
FT                   LQTSPASFDALRETFSASDASVVLFQSALLASIVAIIMGASQKIFKVGEAIDVWITGMK
FT                   SLIITAVILLLAWSLSAVIKELGTATFLVSILSNSIPKFLLPSIIFILGSVISFATGSA
FT                   YGTMGILMPLTIPLAYAISPDPTYVVISVSAVLTGAIFGDHCSPISDTTIMSSMGSACD
FT                   HLDHTSTQMVYALTVAACTILFGYIPAGLGLPIYIVLPLSIGLVALLIRFVGKPNDIPE
FT                   EESLEEVLEMDA"
FT   sig_peptide     503006..503084
FT                   /locus_tag="CBO0421"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.639 between residues 27 and 28"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(503018..503086,503129..503182,503195..503263,
FT                   503333..503401,503462..503530,503573..503641,
FT                   503702..503770,503912..503980,504086..504145,
FT                   504188..504256,504317..504385,504428..504496,
FT                   504581..504634,504644..504712)
FT                   /note="14 probable transmembrane helices predicted for
FT                   CBO0421 by TMHMM2.0 at aa 5-27, 42-59, 64-86,
FT                   110-132,153-175, 190-212, 233-255, 303-325, 361-380,
FT                   395-417,438-460, 475-497, 526-543 and 547-569"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    503603..504643
FT                   /note="Pfam match to entry PF03553 Na_H_antiporter, Na+/H+
FT                   antiporter family, score 270.0, E-value 3.2e-78"
FT                   /inference="protein motif:Pfam:PF03553"
FT   CDS_pept        complement(504799..505014)
FT                   /transl_table=11
FT                   /locus_tag="CBO0422"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium acetobutylicum
FT                   uncharacterized conserved protein, ortholog yuza b.subtilis
FT                   cac0976 SWALL:Q97KE3 (EMBL:AE007613) (69 aa) fasta scores:
FT                   E(): 7.5e-19, 79.68 38d in 64 aa"
FT                   /db_xref="GOA:A5HYW6"
FT                   /db_xref="InterPro:IPR007211"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW6"
FT                   /protein_id="CAL81975.1"
FT                   /translation="MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGDMSAFTRVIY
FT                   ALVGIAGLYAISFYGRDRDEEPREEQ"
FT   misc_feature    complement(504805..505014)
FT                   /note="Pfam match to entry PF04070 DUF378, Domain of
FT                   unknown function (DUF378), score 135.1, E-value 1.4e-37"
FT                   /inference="protein motif:Pfam:PF04070"
FT   misc_feature    complement(order(504841..504900,504928..504996))
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0422 by TMHMM2.0 at aa 7-29 and 39-58"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(505102..505485)
FT                   /transl_table=11
FT                   /gene="panD"
FT                   /locus_tag="CBO0423"
FT                   /product="aspartate 1-decarboxylase"
FT                   /EC_number="4.1.1.11"
FT                   /note="Similar to Escherichia coli, Escherichia coli
FT                   O6,Escherichia coli O157:H7, and Shigella flexneri
FT                   aspartate 1-decarboxylase precursor PanD or b0131 or c0160
FT                   or z0142 or ecs0135 or sf0128 or s0130 SWALL:PAND_ECOLI
FT                   (SWALL:P31664) (126 aa) fasta scores: E(): 4.6e-13, 42.24
FT                   id in 116 aa"
FT                   /db_xref="GOA:A5HYW7"
FT                   /db_xref="InterPro:IPR003190"
FT                   /db_xref="InterPro:IPR009010"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW7"
FT                   /protein_id="CAL81976.1"
FT                   /translation="MTITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQ
FT                   IVDIDNGNRFETYVIAGEKHSGVICLNGAAARMVQKGDKIIIMSYCNLTIDEANKFNPT
FT                   VLFVDNKNNIEKLTNYEKHGEII"
FT   misc_feature    complement(505138..505485)
FT                   /note="Pfam match to entry PF02261 Asp_decarbox, Aspartate
FT                   decarboxylase, score 251.9, E-value 9.3e-73"
FT                   /inference="protein motif:Pfam:PF02261"
FT   CDS_pept        complement(505634..506479)
FT                   /transl_table=11
FT                   /gene="panC"
FT                   /locus_tag="CBO0424"
FT                   /product="pantoate--beta-alanine ligase"
FT                   /EC_number="6.3.2.1"
FT                   /note="Similar to Escherichia coli pantoate--beta-alanine
FT                   ligase PanC or b0133 SWALL:PANC_ECOLI (SWALL:P31663) (283
FT                   aa) fasta scores: E(): 1.5e-39, 43.88 38d in 278 aa"
FT                   /db_xref="GOA:A5HYW8"
FT                   /db_xref="InterPro:IPR003721"
FT                   /db_xref="InterPro:IPR004821"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR042176"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW8"
FT                   /protein_id="CAL81977.1"
FT                   /translation="MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAR
FT                   EENDKIIVSIFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLIFNPETSEMYPNKIY
FT                   SHINVDILTEKLCGEKRPGHFQGVCTVLTKFFNILNPTKAYFGEKDAQQLAVVRKMVED
FT                   LNFPIEIIGCPIIREEDGLAKSSRNAYLNKQERKSALILNKSLKEALKALESGEKNLNN
FT                   IKDIIVSKLNKEPLAKIDYVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL
FT                   "
FT   misc_feature    complement(505643..506479)
FT                   /note="Pfam match to entry PF02569
FT                   Pantoate_ligase,Pantoate-beta-alanine ligase, score 475.1,
FT                   E-value 5.9e-140"
FT                   /inference="protein motif:Pfam:PF02569"
FT   CDS_pept        complement(506533..507360)
FT                   /transl_table=11
FT                   /gene="panB"
FT                   /locus_tag="CBO0425"
FT                   /product="3-methyl-2-oxobutanoate hydroxymethyltransferase"
FT                   /EC_number="2.1.2.11"
FT                   /note="Similar to Escherichia coli 3-methyl-2-oxobutanoate
FT                   hydroxymethyltransferase PanB or b0134 SWALL:PANB_ECOLI
FT                   (SWALL:P31057) (264 aa) fasta scores: E(): 4.7e-38, 46.36
FT                   id in 261 aa"
FT                   /db_xref="GOA:A5HYW9"
FT                   /db_xref="InterPro:IPR003700"
FT                   /db_xref="InterPro:IPR015813"
FT                   /db_xref="InterPro:IPR040442"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYW9"
FT                   /protein_id="CAL81978.1"
FT                   /translation="MRNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDS
FT                   LGMVCLGYENTLSVTMEDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFI
FT                   KEAGAHAVKLEGGATVAEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKK
FT                   LIEDAKILEEAGAFSIVLECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSM
FT                   FSDFKPKFVKSFGNIGESIKDGVSQYIKEVKEAKFPEEKHAFKIDDDVINKLY"
FT   misc_feature    complement(506578..507360)
FT                   /note="Pfam match to entry PF02548
FT                   Pantoate_transf,Ketopantoate hydroxymethyltransferase,
FT                   score 521.3,E-value 7.3e-154"
FT                   /inference="protein motif:Pfam:PF02548"
FT   CDS_pept        508161..511613
FT                   /transl_table=11
FT                   /gene="addB"
FT                   /locus_tag="CBO0426"
FT                   /product="ATP-dependent nuclease subunit B"
FT                   /note="Similar to Bacillus subtilis ATP-dependent nuclease
FT                   subunit B AddB or bsu10620 SWALL:ADDB_BACSU (SWALL:P23477)
FT                   (1166 aa) fasta scores: E(): 5.1e-92, 34.47 38d in 1166 aa"
FT                   /db_xref="GOA:A5HYX0"
FT                   /db_xref="InterPro:IPR014140"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR038726"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYX0"
FT                   /protein_id="CAL81979.1"
FT                   /translation="MSLRFIYGRAGSGKSQYCLNSIKNRIEEDIDRPLILLVPEQFSFQ
FT                   AEKNLIEVLDEKTGFKTQVLSFKRMAYRVFNEVGGITAKHMNESGKSMLLYNIIEDNKN
FT                   NLKVFKKAAKRQGFITTISDIITEFKRYNITPEIILNNLENIEGDNLKYKMEDLALIFS
FT                   QFETRLHKNYIDNEDDLTILAEKLNKSKQFDNAEIWIDEFSSFSPQEYSVLEKLLLKSY
FT                   RINITLCTDYLNQGRFVDTTDVFSPIKNTENKLLQIIEDNNIKLDKPIALNCDPCARFK
FT                   NSAELQHLEKNMFSFPYKEYKNETKDICMLKTLNQFTEIENTAKDIIKLCIDKGCRFKD
FT                   IAVITGDLEGYENIISSVFLQYNIPFFIDKKREINNNPIIVLILSALEVLSKNWTYESV
FT                   FRYLKTGLLDINNEEMDILENYVLANGIKGYQWTNDKPWEHKFFSNYELEDQVEKELLA
FT                   KINDIRYKAMEPIVTLNKNFKSIDKAKEFCEVLYEFLCNINLPDKIQNMIEDFKVEGEI
FT                   EKASEYNQIWNIVMEVLDQIVEVIGEEKISLKEFFKILQTGLSEYEIGLIPPTLDQVMV
FT                   GSITRLRSHNINTLYIVGVNDGIFPSPLKEEGILSDDDRKFLGDKGLEIAKDTKSIAFE
FT                   EQFLVYSTLTTPSKYLRLSYPIADGEGKTLRPSIIISRIKKIFTNICEENDIVKLNGEE
FT                   EELKNISSAKPTFNYLISNLRKDVEGAKIDNIWGDTYKWYLENEFWIEKLNRLIKGFDY
FT                   TNQSKYIETKKIRNLYGKPLKISVSRVEKFSQCPFAYFVQYGLKAKDRKIFNLSYPDLG
FT                   IFMHSILEKFSHELEKQGLEWDTMDLNWAEEEIDKLINEELDNKSLDILNSSKRYEYVT
FT                   KSVKKILKRSIWLIGEHIKRGNFKPSYYELSFDIDGDYPPIAMELHSGEVVNLIGRVDR
FT                   VDLLQKDGATYLKIIDYKSGAKEFKLSDVYYGLQLQLLIYLDAILTELAERSGINGEPG
FT                   ALLYLKLDDPIVKNTVDMSDEEIEKSIIKNLKMKGLILNDPNVIRDMDNIISGISDIIP
FT                   VMVKKDGGVSEGRSSVATKEEFETLRKYVRYTIIEICEEMLEGNIEIKPYKKKDGSSCD
FT                   YCIYSSVCKFDTNIRGNKYNILIDKKDEEVWDAIKKKLEYKNI"
FT   misc_feature    508182..508205
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   repeat_region   complement(511666..511741)
FT   CDS_pept        complement(511827..512213)
FT                   /transl_table=11
FT                   /locus_tag="CBO0427"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX1"
FT                   /protein_id="CAL81980.1"
FT                   /translation="MFNYCNACFVCVPMPMYTTGTKPMLPMEYGHENKTKENEANLKRL
FT                   YPKIYFKIFPLVKEHCEIMKKEKGKDYCPSEKEVDTVCKEIYKRIKPELDDDEDDYTRQ
FT                   RRYRRRHAINDLIRIIFISQLLGI"
FT   CDS_pept        512520..513170
FT                   /transl_table=11
FT                   /locus_tag="CBO0428"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani hypothetical protein
FT                   ctc01031 SWALL:Q896H3 (EMBL:AE015939) (222 aa) fasta
FT                   scores: E(): 1.8e-19, 37.44 38d in 211 aa"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX2"
FT                   /protein_id="CAL81981.1"
FT                   /translation="MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLK
FT                   DYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEICYKSLKKYPDNYFTESVMADINLR
FT                   FYGNLFKARDKYLNALNLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKMDNK
FT                   EFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK"
FT   misc_feature    512898..512999
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   25.1, E-value 0.00017"
FT                   /inference="protein motif:Pfam:PF00515"
FT   misc_feature    513021..513125
FT                   /note="Pfam match to entry PF00515 TPR, TPR Domain, score
FT                   10.5, E-value 0.21"
FT                   /inference="protein motif:Pfam:PF00515"
FT   CDS_pept        513173..513859
FT                   /transl_table=11
FT                   /locus_tag="CBO0429"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc01032 SWALL:Q896H2 (EMBL:AE015939) (235 aa) fasta
FT                   scores: E(): 1.1e-41, 50.67 38d in 223 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX3"
FT                   /protein_id="CAL81982.1"
FT                   /translation="MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESM
FT                   KRKDNSPVLEVAPKLKNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENM
FT                   DIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTEL
FT                   MNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENN
FT                   IECDFV"
FT   CDS_pept        complement(514108..514716)
FT                   /transl_table=11
FT                   /locus_tag="CBO0430"
FT                   /product="TetR-family transcriptional regulator"
FT                   /note="Similar to Bacteroides thetaiotaomicron
FT                   transcriptional regulator bt0507 SWALL:Q8AAF8
FT                   (EMBL:AE016928) (202 aa) fasta scores: E(): 9.5e-06,26.31
FT                   38d in 190 aa"
FT                   /db_xref="GOA:A5HYX4"
FT                   /db_xref="InterPro:IPR001647"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR023772"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX4"
FT                   /protein_id="CAL81983.1"
FT                   /translation="MNVNEYNQKKQHILEAAIIKFTENGFDKTSLREIASAAGLTTGAI
FT                   YHHFKNKDELFYHAVKEAMCFAQKLSEKDENSNLKSAEDMLDEISNKVKERMSKINEQR
FT                   LLVLLIGYVLSKGGALNESLKQDYNEIISKVADMYFFAFGIENEYYKKSLASILIAALD
FT                   GVAMQYSLGVLKQEDQKFKDIFVNFFIESIPAFMQKYKP"
FT   misc_feature    complement(514540..514680)
FT                   /note="Pfam match to entry PF00440 tetR, Bacterial
FT                   regulatory proteins, tetR family, score 66.8, E-value
FT                   4.7e-17"
FT                   /inference="protein motif:Pfam:PF00440"
FT   misc_feature    complement(514552..514644)
FT                   /note="PS01081 Bacterial regulatory proteins, tetR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01081"
FT   misc_feature    complement(514567..514632)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1898.000, SD 5.65 at aa 29-50, sequence
FT                   TSLREIASAAGLTTGAIYHHFK"
FT   CDS_pept        514961..515632
FT                   /transl_table=11
FT                   /gene="hypB"
FT                   /locus_tag="CBO0431"
FT                   /product="hydrogenase nickel incorporation protein"
FT                   /note="Similar to Escherichia coli, and Escherichia coli O6
FT                   hydrogenase isoenzymes nickel incorporation protein HypB or
FT                   b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa)
FT                   fasta scores: E(): 3e-28, 40.74 38d in 216 aa"
FT                   /db_xref="GOA:A5HYX5"
FT                   /db_xref="InterPro:IPR003495"
FT                   /db_xref="InterPro:IPR004392"
FT                   /db_xref="InterPro:IPR012202"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX5"
FT                   /protein_id="CAL81984.1"
FT                   /translation="MKTYKVLEIKQSVFENNDRQAELLREELKKKGIFLLNLMSSPGSG
FT                   KTTTLLRTVKALKNEMNIGVLEADIDSEVDANKVSQSGVKVIQLHTGGMCHLDADMTKQ
FT                   SLNGLGTENIDLAVLENIGNLVCPAEFDTGASRNAMILSIPEGDDKPLKYPLMFSIVDV
FT                   LLINKIDAKDYFEFDLEAVKERVRKLNPNIKVIPISAKTGEGIEEWIDWIRKEVKIWKE
FT                   S"
FT   misc_feature    515027..515410
FT                   /note="Pfam match to entry PF01495 HypB_UreG, HypB/UreG
FT                   nucleotide-binding domain, score 148.4, E-value 1.4e-41"
FT                   /inference="protein motif:Pfam:PF01495"
FT   CDS_pept        515868..518546
FT                   /transl_table=11
FT                   /locus_tag="CBO0432"
FT                   /product="putative pyridine nucleotide-disulphide
FT                   oxidoreductase"
FT                   /note="Similar to Moorella thermoacetica formate
FT                   dehydrogenase beta subunit fdhB SWALL:P77907 (EMBL:U73807)
FT                   (707 aa) fasta scores: E(): 5.5e-36, 34.26 38d in 502 aa"
FT                   /db_xref="GOA:A5HYX6"
FT                   /db_xref="InterPro:IPR009051"
FT                   /db_xref="InterPro:IPR017896"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="InterPro:IPR023753"
FT                   /db_xref="InterPro:IPR028261"
FT                   /db_xref="InterPro:IPR036188"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX6"
FT                   /protein_id="CAL81985.1"
FT                   /translation="MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILEPVVTNEMAEV
FT                   ALCMEIRKKVTAKEIAPLCGKTLEETTKLLLELAEAGVCFVNEVDGIDIFWYDTWVPGI
FT                   MEMMVNNKKNVKKYPQIARAFEAYGRVRGPKTAGSFPVGVGLMRVIPIEHAISGETRRA
FT                   SYEEVSKYLNENEIFSVADCSCRTAREVMGEGCGHLKEDMCIQMGHAAEYYIRTGRGRQ
FT                   ITREEAFEIIKRAEENGLMHQIPNLDGSGKTHAICNCCGCSCLSLRTAGMFINADMVRS
FT                   NYVSKVDKEKCVACGECVQNCPVNALQLGQKLCSRTPVTTEIKRTETPRDTEWGPDKWN
FT                   PDYRINRKNVVDTGTSPCKTQCPAHIAVQGYIKLAAQEKYKEALELIKHENPFPAVCGR
FT                   ICPRKCESACTRGDIDKPVAIDEIKKFIAEQDLNVKYRYVPKRRHEYGKKIAVIGAGPS
FT                   GLSCAYFLAIDGYKVTVFEKQEVLGGMLTLGIPSFRLEKEVVNAEIDILKELGVEFKTG
FT                   VEVGKDVAFKELRDQDFKAFYIAIGASMGRKLGIEGEDAENVITGIDFMRDANLGKDLK
FT                   LEGDVIVIGGGNVAIDVARTATRIGDTQVKMYCLESHEEMPALPEEIEEALSEDIQINN
FT                   SWGPKRIIVENGRATGIEFKKCISVFNEQGKFNPIYDENNTITVKADTILLSIGQGMDW
FT                   GELLKDSKVELNRNNTIKADPVTLQTAEEDIFAGGDALTGPKFAIDSIALGKEGAISIH
FT                   RYVQPGQSLIIGRDRKEYHALDKENLEIEGYDRTPRQDIGHVDGSKSKKTFKDLRGTFT
FT                   KEQVKKETERCLSCGATVVDEFLCVGCGQCTTKCKFDAISLVRKYDGEGVAYEDLKPVV
FT                   IKQVLKRKVKITTKKVKTLLK"
FT   misc_feature    516720..516791
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 37.8, E-value 2.7e-08"
FT                   /inference="protein motif:Pfam:PF00037"
FT   misc_feature    516741..516776
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT                   /inference="protein motif:ProSite:PS00198"
FT   misc_feature    517212..518087
FT                   /note="Pfam match to entry PF00070 pyr_redox, Pyridine
FT                   nucleotide-disulphide oxidoreductase, score 66.3, E-value
FT                   6.9e-17"
FT                   /inference="protein motif:Pfam:PF00070"
FT   misc_feature    518352..518423
FT                   /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding
FT                   domain, score 30.8, E-value 3.2e-06"
FT                   /inference="protein motif:Pfam:PF00037"
FT   CDS_pept        518599..518943
FT                   /transl_table=11
FT                   /gene="hypA"
FT                   /locus_tag="CBO0433"
FT                   /product="hydrogenase nickel incorporation protein"
FT                   /note="Similar to Bradyrhizobium japonicum hydrogenase
FT                   nickel incorporation protein HypA or bll6932
FT                   SWALL:HYPA_BRAJA (SWALL:Q45256) (113 aa) fasta scores: E():
FT                   6.6e-08, 30 38d in 110 aa"
FT                   /db_xref="GOA:A5HYX7"
FT                   /db_xref="InterPro:IPR000688"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX7"
FT                   /protein_id="CAL81986.1"
FT                   /translation="MLHELGVIIEVVKTVEDIAIKNHLTKIDTIVLQIGELSSMIPKYI
FT                   EECYPAAVDGTIMESTKLKIEILPGNALCKKCNKVYNIMANRRGCPYCESREWELLCGK
FT                   EFLIKEILAY"
FT   misc_feature    518605..518940
FT                   /note="Pfam match to entry PF01155 HypA, Hydrogenase
FT                   expression/synthesis hypA family, score 60.1, E-value
FT                   5.1e-15"
FT                   /inference="protein motif:Pfam:PF01155"
FT   CDS_pept        518982..519968
FT                   /transl_table=11
FT                   /locus_tag="CBO0434"
FT                   /product="putative membrane protein"
FT                   /note="No significant database matches"
FT                   /db_xref="GOA:A5HYX8"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX8"
FT                   /protein_id="CAL81987.1"
FT                   /translation="MFEFNYAEGATIFTALGIWFIVFASLFLFNEFGRRKKWVGFFSFV
FT                   VLPIILTITWFTVLKDVTYTDWFHLAKVYSATAGCIGFWFIRHIEKKDRLTGEVVWRLA
FT                   DNKIALCFPPLILAINILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNAAAG
FT                   ILNIITITGWFGIKIRKETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYA
FT                   GLALLFAPTLCAFTVGKGAWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYT
FT                   ILSAIALGVNIAVFIYMIYKVKKTKKNPYKQELYSDLDKFKEVKIMA"
FT   misc_feature    order(519009..519068,519093..519152,519180..519239,
FT                   519438..519506,519549..519617,519636..519695,
FT                   519813..519881)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0434 by TMHMM2.0 at aa 10-29, 38-57, 67-86,
FT                   153-175,190-212, 219-238 and 278-300"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        complement(520142..520630)
FT                   /transl_table=11
FT                   /locus_tag="CBO0435"
FT                   /product="putative exported protein"
FT                   /note="Similar to Carsonella ruddii alkyl hydroperoxide
FT                   reductase small subunit AhpC SWALL:Q9AIY8 (EMBL:AF211135)
FT                   (177 aa) fasta scores: E(): 7.1, 27.32 38d in 161 aa"
FT                   /db_xref="GOA:A5HYX9"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYX9"
FT                   /protein_id="CAL81988.1"
FT                   /translation="MKKLSFKTIWNIIILIPLIGFFCGLVPIKYNGSTKEYNGYYYSYQ
FT                   AKKIQAKDPIKVKLVFKSYTKFYLFKLTKSDEFKGELFINNTKYDIKRLNFINDKSVHN
FT                   KYIGQIKNNKSNYNFSTIFISEDLNMASISDYNKNYDIWCTTKNLNDIKNVDMKFFKE"
FT   sig_peptide     complement(520537..520630)
FT                   /locus_tag="CBO0435"
FT                   /note="probabilty 0.834, with cleavage site probability
FT                   0.705 between residues 30 and 31"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        521001..524840
FT                   /transl_table=11
FT                   /gene="addA"
FT                   /locus_tag="CBO0436"
FT                   /product="ATP-dependent nuclease subunit A"
FT                   /note="Similar to Bacillus subtilis ATP-dependent nuclease
FT                   subunit A AddA or bsu10630 SWALL:ADDA_BACSU (SWALL:P23478)
FT                   (1232 aa) fasta scores: E(): 1.2e-58, 38.82 38d in 1288 aa"
FT                   /db_xref="GOA:A5HYY0"
FT                   /db_xref="InterPro:IPR000212"
FT                   /db_xref="InterPro:IPR011335"
FT                   /db_xref="InterPro:IPR011604"
FT                   /db_xref="InterPro:IPR014016"
FT                   /db_xref="InterPro:IPR014017"
FT                   /db_xref="InterPro:IPR014152"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR034739"
FT                   /db_xref="InterPro:IPR038726"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYY0"
FT                   /protein_id="CAL81989.1"
FT                   /translation="MSGTKWTDEQRQAIFTKDCNLLVAAGAGAGKTAVLVQRIIEKILD
FT                   KGEPIDIDKLLVVTFTNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTI
FT                   HSFCLQVIKNNFHTMEIDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESY
FT                   ASRKDTRLQEVVLELHRFAKSAPFSYDWLLNMAEEFNVGEEFNFEETPWADMIMEDMKV
FT                   LLHGFKNMLQQSIDVILNSEGIDYYYEPFKMDLSFINSLLEKSSFKEFRGEIIAYDFPK
FT                   LPLKRNKDADKEAKERVKKLRDKVKKKIVELKNILDSYENEFIKKEFIFLYPSMKALSN
FT                   LVILFDKKYEAKKRERDLIDFNDIEHLCLSILTDKNSEGHIIPSDIALDYRKKFAEVLI
FT                   DEYQDSNLVQEVIMSMVSRVKGYWSFYNGQLMFNEEEINLEEPQICLDIPNRFMVGDVK
FT                   QSIYRFRQAKPEIFLDKYNEYSEEEGTKNRKVKLFKNFRSRKEVINGVNYLFKQIMSKT
FT                   IGELDYTEEEALKVGASYGEEVKGEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQL
FT                   EGRLVAKKIQKLVGNNLEGGLKVFDKKLGEYRNLQYRDIVILMRATSNWAPIFVEELAK
FT                   EGIPVFADTNSGYFDTAEIKTMISLLQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRM
FT                   VNKNITFYECMEIIYRLYKNEKLDSYYSFYIEDENKINKIIKDMNEKLKNKICSFIEKL
FT                   KLWREKSIHIDIDEFIWFLYVETGYYGYAGALQAGEQRQANLRILFQRAKQYAKTSYKG
FT                   LFNFINFINKLKFSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILSGTGKNFNMT
FT                   DLNKNILFHRDLGYGPDYVDTERRIAYPSLVKNIIKNKIRLETLSEEMRILYVALTRAR
FT                   EKLIITGLINNMDKTVEDWLNLSEDKNKVPEYAVMSGKTYLDWIGPALIKHKDAVSFRE
FT                   ELKMTSELSNIVDDKSKWKIELWNKRELLKEKVEEDEVEISEKIKETLMNLEESNYKEE
FT                   IYKRLSFKYKYDNASSIPTKLSVSDVKKQFILDEKENTEELFKKLELRKPMFMEEKKKI
FT                   SPSERGTIIHLFMQHLDLKKAENEEDIKEQINRLIEREFITYEQSKVINPYKILKFCRG
FT                   ELGKRILNSNNVNKEMPFSIEIPALEIYKELDKEIYKDEKLIIQGVIDCYFEEEDGLVL
FT                   LDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGKNVKDKYLYLFSVDNYIKID"
FT   misc_feature    521016..523334
FT                   /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP
FT                   helicase, score 284.3, E-value 1.6e-82"
FT                   /inference="protein motif:Pfam:PF00580"
FT   misc_feature    521073..521096
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        524980..526671
FT                   /transl_table=11
FT                   /locus_tag="CBO0437"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="Similar to Bacillus subtilis methyl-accepting
FT                   chemotaxis protein TlpC or bsu03440 SWALL:TLPC_BACSU
FT                   (SWALL:P39209) (573 aa) fasta scores: E(): 1.6e-22, 32.24
FT                   id in 397 aa"
FT                   /db_xref="GOA:A5HYY1"
FT                   /db_xref="InterPro:IPR000727"
FT                   /db_xref="InterPro:IPR004089"
FT                   /db_xref="InterPro:IPR004090"
FT                   /db_xref="InterPro:IPR029151"
FT                   /db_xref="InterPro:IPR033479"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY1"
FT                   /protein_id="CAL81990.1"
FT                   /translation="MSGLKNKLIRQIALLFNVLILILCATFFIGTKSILKGLENNDPNL
FT                   LASFSSSYLKFIAIMFIIMLAVSYIVVRVFVTKAYNSIEEVAEIIDRVSKGEFATRVPE
FT                   EGILEPIGVSVNAIVRNTKKILSDLLQISQKNRIISNTLHENALDSNQATENIASSVIS
FT                   VAETATTQADSTTSTRNNTSEMAENSTVIAEKAQNTKNIAEEMVKTIKENQKTFETMIY
FT                   KIKSTGDVSKKLAKNVRILESEAEEISKITDVVTEISERTNLLALNAAIEAARAGEHGK
FT                   GFSVVADEVRKLAEQSSESAGEIRKLIEKITYQITNITEEAENQSKEVEEDIVYADESR
FT                   ESFNEIISSTDETYNSVEQIYDLSDKNTTISKEVDQLMETIASGAQQSASMTEEISAAV
FT                   EEQSASINEITQLIKEMNVCTDEIDSELKAFVTNITIKGEQKQLVNEGFNILEKISREI
FT                   NSNNLSVDACSNICKQYVEANNQFEYIGVIDKEGIMKSANVPITKGNDDFSHRPYFKKA
FT                   ILGEKYASKPYISSVSYNYCIAIAISLKDKNGNIQAVVMGDVCIEQ"
FT   sig_peptide     524980..525082
FT                   /locus_tag="CBO0437"
FT                   /note="probabilty 0.948, with cleavage site probability
FT                   0.353 between residues 35 and 36"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(525016..525084,525127..525195)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0437 by TMHMM2.0 at aa 13-35 and 50-72"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    525412..526236
FT                   /note="Pfam match to entry PF00015
FT                   MCPsignal,Methyl-accepting chemotaxis protein (MCP)
FT                   signaling domain, score 159.4, E-value 6.6e-45"
FT                   /inference="protein motif:Pfam:PF00015"
FT   CDS_pept        526748..527974
FT                   /transl_table=11
FT                   /gene="pepT"
FT                   /locus_tag="CBO0438"
FT                   /product="peptidase T"
FT                   /EC_number="3.4.11.14"
FT                   /note="Similar to Bacillus subtilis peptidase T PepT or
FT                   bsu38920 SWALL:PEPT_BACSU (SWALL:P55179) (410 aa) fasta
FT                   scores: E(): 7.9e-87, 57.17 38d in 404 aa"
FT                   /db_xref="GOA:A5HYY2"
FT                   /db_xref="InterPro:IPR001261"
FT                   /db_xref="InterPro:IPR002933"
FT                   /db_xref="InterPro:IPR010161"
FT                   /db_xref="InterPro:IPR011650"
FT                   /db_xref="InterPro:IPR036264"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYY2"
FT                   /protein_id="CAL81991.1"
FT                   /translation="MKDVLERFLGYIKVDTQSSEESDTVPTTKTQLEFAKKLGEELKAI
FT                   GLKDVSVDENGYVMATLESNIDKKVPTIGFIAHMDTSPDLSGTNINPRIVEKYDGQDIV
FT                   LNKEKNIVLKINEFPEILEYKGQDIVVTDGNTLLGADDKAGIAEIITAMEYLINHPEIK
FT                   HGTIKVGFTPDEEVGKGADHFDVKKFGADLAYTLDGGGIGELECETFNAAKAKVIIEGR
FT                   NVHPGSAKNKMTNAVLVANKFINMLPENEVPERTEGYEGFFHLLSVKSEVETAELNYII
FT                   RDFDRKKFEERKEQIKEVGKKINEEYNKEIVCVKVEDQYYNMKEKIDEVKYVVDIAYDA
FT                   MKAIDIEPILVPIRGGTDGSRLSFMGLPTPNLFAGGHNFHGRFEFVPVLSMEKAAELVV
FT                   KIAELYANR"
FT   misc_feature    526769..527968
FT                   /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase
FT                   family M20/M25/M40, score 188.6, E-value 1e-53"
FT                   /inference="protein motif:Pfam:PF01546"
FT   misc_feature    526964..526993
FT                   /note="PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00758"
FT   misc_feature    527162..527281
FT                   /note="PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00759"
FT   CDS_pept        complement(528249..529181)
FT                   /transl_table=11
FT                   /locus_tag="CBO0439"
FT                   /product="putative patatin-like phospholipase"
FT                   /note="Similar to Bacillus cereus hypothetical membrane
FT                   spanning protein bc1989 SWALL:Q813P5 (EMBL:AE017004) (321
FT                   aa) fasta scores: E(): 6e-42, 41.23 38d in 308 aa"
FT                   /db_xref="GOA:A5HYY3"
FT                   /db_xref="InterPro:IPR002641"
FT                   /db_xref="InterPro:IPR016035"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY3"
FT                   /protein_id="CAL81992.1"
FT                   /translation="MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGA
FT                   LLASGYTAKDLKHITANTDFMELLNKEGIQKSTFVGKAINFFKFNGVYSGDFMEKWIDD
FT                   MLKVKGINTFSDLMDNDTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAIRMS
FT                   VSIPFFFKPVEFIHGDGLSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNT
FT                   KQGKKEPLSFLFDIADTMNKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLY
FT                   KSGYKSAEKFLKTWDFAKYKNKYKKEGTA"
FT   misc_feature    complement(528585..529169)
FT                   /note="Pfam match to entry PF01734 Patatin, Patatin-like
FT                   phospholipase, score 107.3, E-value 3.2e-29"
FT                   /inference="protein motif:Pfam:PF01734"
FT   CDS_pept        complement(529221..529379)
FT                   /transl_table=11
FT                   /locus_tag="CBO0440"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY4"
FT                   /protein_id="CAL81993.1"
FT                   /translation="MISNTPQMPPSCLYVSRLPANNPIAIIAIKRTTINKNFLILYFYC
FT                   IIYIRIC"
FT   CDS_pept        529483..529611
FT                   /transl_table=11
FT                   /locus_tag="CBO0441"
FT                   /product="putative membrane protein"
FT                   /note="No significant database matches"
FT                   /db_xref="GOA:A5HYY5"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY5"
FT                   /protein_id="CAL81994.1"
FT                   /translation="MIVSKIIINIYDTSSVKIYIILKLIFIMCTIKLLFIIHLQKH"
FT   repeat_region   529534..529577
FT   misc_feature    529540..529599
FT                   /note="1 probable transmembrane helix predicted for CBO0441
FT                   by TMHMM2.0 at aa 20-39"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        529753..530469
FT                   /transl_table=11
FT                   /locus_tag="CBO0442"
FT                   /product="metallo-beta-lactamase family protein"
FT                   /note="Similar to Bacillus anthracis metallo-beta-lactamase
FT                   family protein ba2399 SWALL:Q81QM5 (EMBL:AE017031) (288 aa)
FT                   fasta scores: E(): 3.5e-34,40.43 38d in 230 aa"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="InterPro:IPR036866"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY6"
FT                   /protein_id="CAL81995.1"
FT                   /translation="MFKKLTERVYYLEHNEDTDRPVLGYIKGDKFSIMIDGGNSANHVA
FT                   IYMEELDKRQLSHPKFVTITHWHWDHTFGISATNAVIIANSLTNKQLCKMRGWKWDEES
FT                   MDKRVAAGEEIEFCNSMIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIGGCH
FT                   SDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKLKKVISILSEIEFDIVIEGHNEHT
FT                   DKAELLEYLEGKLTEI"
FT   misc_feature    529813..530406
FT                   /note="Pfam match to entry PF00753
FT                   lactamase_B,Metallo-beta-lactamase superfamily, score 40.1,
FT                   E-value 5.4e-09"
FT                   /inference="protein motif:Pfam:PF00753"
FT   CDS_pept        530675..531148
FT                   /transl_table=11
FT                   /locus_tag="CBO0443"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Methanosarcina mazei conserved protein
FT                   mm1395 SWALL:Q8PX27 (EMBL:AE013374) (154 aa) fasta scores:
FT                   E(): 8e-25, 48.36 38d in 153 aa"
FT                   /db_xref="InterPro:IPR025870"
FT                   /db_xref="InterPro:IPR029068"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY7"
FT                   /protein_id="CAL81996.1"
FT                   /translation="MEFKLALLAVKNVSVSRQFYEELFDQKVILDLGKNVTFSGGFAIQ
FT                   EDFAWLTNVASDSVIERSNNMELYFEVDDFDAFMQKIQEYENIKYVHQPKKYKWKQRVV
FT                   RIYDPDHHIIEIGESMAVIAKRYLDEGYSIGETSKIIQHPIEFVKMYNQKINR"
FT   misc_feature    530678..531022
FT                   /note="Pfam match to entry PF00903
FT                   Glyoxalase,Glyoxalase/Bleomycin resistance
FT                   protein/Dioxygenase superfamily, score 24.3, E-value
FT                   0.00029"
FT                   /inference="protein motif:Pfam:PF00903"
FT   CDS_pept        531549..532970
FT                   /transl_table=11
FT                   /locus_tag="CBO0444"
FT                   /product="putative cell wall binding protein"
FT                   /note="Similar to Bacillus subtilis
FT                   N-acetylmuramoyl-L-alanine amidase cwlb precursor LytC or
FT                   CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa)
FT                   fasta scores: E(): 1.9e-30, 32.7 38d in 318 aa"
FT                   /db_xref="InterPro:IPR007253"
FT                   /db_xref="InterPro:IPR031841"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY8"
FT                   /protein_id="CAL81997.1"
FT                   /translation="MKKRLLNITSAVVASCVMFFSSNVVSAATLQERLCGNNRYETNSK
FT                   IVDSGWTSSEYAVVASGDDFADALCAAPLAKQNKAPILLANKDTLSIESKKQLSRLKVK
FT                   KVFIIGGIGVITDNVKLEIESMGIETSRIYGENRFETSIEVAKNLKNISGVVVANGYGF
FT                   ADALSIAPVAAQKGMPILLTNRGDLSKVAKEFLDTKTLTESYVVGGTGVVSSKISSQLN
FT                   NNTRLGGENRYETNSAVLNHFADKFSYDKVYVASGENYPDALSGSVLAAASKSPLVLVG
FT                   DSVNSSVMSSVKAQHDKYNNVIVLGGTGVVSDVSANSIVHGIKYLNDREALTLINNANK
FT                   LGYPVIESNAMPSIYIGDKIYQKFQDEFNSPEKIYAYLNKYYTRSSINEIMNMLQVREI
FT                   DGAYCKIVGQLGDYNPDILNAKIKSKSIFNNKMDLVISTRHLHLPDDYTNNYKVELLYE
FT                   DGKWRVNYWEGLIQR"
FT   sig_peptide     531549..531627
FT                   /locus_tag="CBO0444"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.992 between residues 27 and 28"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    531561..531629
FT                   /note="1 probable transmembrane helix predicted for CBO0444
FT                   by TMHMM2.0 at aa 5-27"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    531564..531596
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    531642..531914
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 49.3, E-value 9e-12"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    531939..532208
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 86.7, E-value 5.1e-23"
FT                   /inference="protein motif:Pfam:PF04122"
FT   misc_feature    532221..532502
FT                   /note="Pfam match to entry PF04122 CW_binding_2, Putative
FT                   cell wall binding repeat 2, score 64.9, E-value 1.8e-16"
FT                   /inference="protein motif:Pfam:PF04122"
FT   repeat_region   533047..533087
FT                   /rpt_family="CB.746"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="attatttttctagatatctattttctctaaaagtatttttt"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        complement(533178..533813)
FT                   /transl_table=11
FT                   /locus_tag="CBO0445"
FT                   /product="binding-protein-dependent transport
FT                   system,membrane component"
FT                   /note="Similar to Listeria innocua hypothetical protein
FT                   Lin1851 lin1851 SWALL:Q92AR8 (EMBL:AL596170) (213 aa) fasta
FT                   scores: E(): 2.2e-40, 51.65 38d in 211 aa"
FT                   /db_xref="GOA:A5HYY9"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="InterPro:IPR010065"
FT                   /db_xref="InterPro:IPR035906"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYY9"
FT                   /protein_id="CAL81998.1"
FT                   /translation="MSNLSDITIFILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIK
FT                   PLKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFR
FT                   AGIESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIG
FT                   IGDMLRAAKEVVTRDFTITPFFIAAAIYLLITAFLVLIFRTLEKKYAY"
FT   misc_feature    complement(533181..533783)
FT                   /note="Pfam match to entry PF00528
FT                   BPD_transp,Binding-protein-dependent transport system inner
FT                   membrane component, score 123.2, E-value 5.1e-34"
FT                   /inference="protein motif:Pfam:PF00528"
FT   misc_feature    complement(order(533208..533276,533577..533645,
FT                   533703..533771))
FT                   /note="3 probable transmembrane helices predicted for
FT                   CBO0445 by TMHMM2.0 at aa 15-37, 57-79 and 180-202"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    complement(533409..533495)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT                   /inference="protein motif:ProSite:PS00402"
FT   CDS_pept        complement(533826..534629)
FT                   /transl_table=11
FT                   /locus_tag="CBO0446"
FT                   /product="binding-protein-dependent transport
FT                   system,permease component"
FT                   /note="Similar to Escherichia coli, and Escherichia coli O6
FT                   cystine-binding periplasmic protein precursor FliY or b1920
FT                   or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta
FT                   scores: E(): 5.9e-25, 33.84 38d in 260 aa"
FT                   /db_xref="GOA:A5HYZ0"
FT                   /db_xref="InterPro:IPR001320"
FT                   /db_xref="InterPro:IPR001638"
FT                   /db_xref="InterPro:IPR018313"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ0"
FT                   /protein_id="CAL81999.1"
FT                   /translation="MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGL
FT                   DDSFPPMGFKNDKGEIVGFDIDLAKEVAKKMGIKVVFKPVQWDGVVLSLNNKDIDVIWN
FT                   GLTITEKRKEQINFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSD
FT                   KDFVKSLKELKKYSNNTEALMDLQAKRVDAVVVDEVVGRYYISKKPNVFKVLDEDFGGE
FT                   SYGVGFRKTDNSFREAVDKALDEVIKDGTADKISEKWFGKGIFKK"
FT   misc_feature    complement(533844..534509)
FT                   /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial
FT                   extracellular solute-binding proteins, family 3, score
FT                   276.0, E-value 5.1e-80"
FT                   /inference="protein motif:Pfam:PF00497"
FT   misc_feature    complement(534402..534443)
FT                   /note="PS01039 Bacterial extracellular solute-binding
FT                   proteins, family 3 signature."
FT                   /inference="protein motif:ProSite:PS01039"
FT   sig_peptide     complement(534542..534629)
FT                   /locus_tag="CBO0446"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.890 between residues 28 and 29"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    complement(534564..534596)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    complement(534564..534617)
FT                   /note="1 probable transmembrane helix predicted for CBO0446
FT                   by TMHMM2.0 at aa 5-22"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        534850..535578
FT                   /transl_table=11
FT                   /locus_tag="CBO0447"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   sam-dependent methyltransferases smta5 or tte2398
FT                   SWALL:Q8R7K7 (EMBL:AE013182) (222 aa) fasta scores: E():
FT                   0.0023, 25.22 38d in 218 aa"
FT                   /db_xref="GOA:A5HYZ1"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="InterPro:IPR041698"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ1"
FT                   /protein_id="CAL82000.1"
FT                   /translation="MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIA
FT                   YFILFISILFIANGLRIVNFIFAGRFKHIGRIISKVNWTGNENVLDVGVGKGILAIAVA
FT                   KKLKNGSGKVIGIDIWDSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKNETF
FT                   DVIVSKQCIHNIEDKQERKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNI
FT                   SSKYFLDTYPASSILEVTKK"
FT   misc_feature    order(534886..534954,534982..535050)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0447 by TMHMM2.0 at aa 17-39 and 49-71"
FT                   /inference="protein motif:TMHMM:2.0"
FT   repeat_region   complement(535640..535826)
FT                   /note="intergenic repeat 1"
FT   CDS_pept        complement(535927..537138)
FT                   /transl_table=11
FT                   /locus_tag="CBO0448"
FT                   /product="putative signaling protein"
FT                   /note="Similar to Bacillus subtilis hypothetical protein
FT                   yuxh or bsu31740 SWALL:YUXH_BACSU (SWALL:P14203) (409 aa)
FT                   fasta scores: E(): 1.1e-47, 40.04 38d in 412 aa"
FT                   /db_xref="InterPro:IPR001633"
FT                   /db_xref="InterPro:IPR013976"
FT                   /db_xref="InterPro:IPR014408"
FT                   /db_xref="InterPro:IPR035919"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ2"
FT                   /protein_id="CAL82001.1"
FT                   /translation="MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKV
FT                   IINSFLLIGIKNLTNGKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSC
FT                   KNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKF
FT                   LAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDLPIHSTTKYKILKEINKEDIDL
FT                   NYLEELIKTDLSLYYKLLKFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDIT
FT                   SNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPI
FT                   SQDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNAICKHLNIYPNELTTIYINALDWTN
FT                   KFNL"
FT   misc_feature    complement(536542..537138)
FT                   /note="Pfam match to entry PF00563 EAL, EAL domain, score
FT                   -61.1, E-value 1.2e-05"
FT                   /inference="protein motif:Pfam:PF00563"
FT   CDS_pept        complement(537404..538021)
FT                   /transl_table=11
FT                   /gene="thiE"
FT                   /gene_synonym="thiC"
FT                   /locus_tag="CBO0449"
FT                   /product="thiamine-phosphate pyrophosphorylase"
FT                   /EC_number="2.5.1.3"
FT                   /note="Similar to Bacillus subtilis thiamine-phosphate
FT                   pyrophosphorylase ThiE or ThiC or ipa-26d or bsu38290
FT                   SWALL:THIE_BACSU (SWALL:P39594) (222 aa) fasta scores: E():
FT                   1.2e-15, 39.1 38d in 179 aa"
FT                   /db_xref="GOA:A5HYZ3"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="InterPro:IPR022998"
FT                   /db_xref="InterPro:IPR034291"
FT                   /db_xref="InterPro:IPR036206"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYZ3"
FT                   /protein_id="CAL82002.1"
FT                   /translation="MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVST
FT                   REFYNVAKEVKEVTDYYKVPIIINDRLDIAQAIDASGVHLGQKDMHLNIAREILGKDKI
FT                   IGISVGNVKEALQAQNNGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPSVAI
FT                   GGINKTNFKDVLKTGIEGISVISAILDEDDIKLAANNLLINK"
FT   misc_feature    complement(537407..538012)
FT                   /note="Pfam match to entry PF02581 TMP-TENI, Thiamine
FT                   monophosphate synthase/TENI, score 267.1, E-value 2.4e-77"
FT                   /inference="protein motif:Pfam:PF02581"
FT   CDS_pept        complement(538012..538803)
FT                   /transl_table=11
FT                   /gene="thiM"
FT                   /gene_synonym="thiK"
FT                   /locus_tag="CBO0450"
FT                   /product="hydroxyethylthiazole kinase"
FT                   /EC_number="2.7.1.50"
FT                   /note="Similar to Bacillus subtilis hydroxyethylthiazole
FT                   kinase ThiM or ThiK or ipa-25d or bsu38300 SWALL:THIM_BACSU
FT                   (SWALL:P39593) (272 aa) fasta scores: E(): 7.5e-30, 38.82
FT                   38d in 255 aa"
FT                   /db_xref="GOA:A5HYZ4"
FT                   /db_xref="InterPro:IPR000417"
FT                   /db_xref="InterPro:IPR029056"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYZ4"
FT                   /protein_id="CAL82003.1"
FT                   /translation="MKNKNVIQKMREKTPLIHCITNYVTINDCANILLSFGASPAMCEA
FT                   YDEVYDFVSISSALYINLGTLTKEQETAAVLASISAKNHNVPVVIDPVGCPAIKRKVEV
FT                   INRIAEVGRIDIIKGNIGEIKFLAGMDSETRGVDSLDNGENALDACTQLAKKYNCIVAA
FT                   TGEKDFVSDGKRGSVIKNGTEMLTKVTGAGCMLGALCAATCANFEDKLVSTTAAILSMN
FT                   IAGEKAYEEAQLPGSFRIALIDNIYMISDEEIWERGNVEWK"
FT   misc_feature    complement(538048..538785)
FT                   /note="Pfam match to entry PF02110 HK,Hydroxyethylthiazole
FT                   kinase family, score 366.2, E-value 3.6e-107"
FT                   /inference="protein motif:Pfam:PF02110"
FT   CDS_pept        complement(539035..539835)
FT                   /transl_table=11
FT                   /gene="thiD1"
FT                   /locus_tag="CBO0451"
FT                   /product="phosphomethylpyrimidine kinase"
FT                   /EC_number="2.7.4.7"
FT                   /note="This CDS is also similar to CBO0771 (52.308 identity
FT                   in 260 aa overlap)"
FT                   /db_xref="GOA:A5HYZ5"
FT                   /db_xref="InterPro:IPR004399"
FT                   /db_xref="InterPro:IPR013749"
FT                   /db_xref="InterPro:IPR029056"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ5"
FT                   /protein_id="CAL82004.1"
FT                   /translation="MKKVLTIAGSDSSGGAGIQADIKTMSSLGVYAMSIITAVTAQNSI
FT                   GVQDVHEVPKNMVEAQIKSVFDDIDVDAVKIGMLSNSETIKSIKEYLEKYKAKNIVLDP
FT                   VMVSKSGYFLLKPEAIEELKKLISITNIVTPNIPEAEVLSKIEINSEDDMKKAAIIIQA
FT                   IGVKNVLVKGGHRCSDANDILLYEDKFITIPGNRIETKNTHGTGCTLSSAIASYLTKGF
FT                   NIEKSVSLSKEYITKAIENSFPIGEGVGPVGHFIELYKKAHLDF"
FT   misc_feature    complement(539320..539550)
FT                   /note="Pfam match to entry PF00294 pfkB, pfkB family
FT                   carbohydrate kinase, score 18.7, E-value 3.5e-05"
FT                   /inference="protein motif:Pfam:PF00294"
FT   misc_binding    complement(540140..540243)
FT                   /gene="thiD1"
FT                   /locus_tag="CBO0451"
FT                   /bound_moiety="thiamin pyrophosphate"
FT                   /note="TPP riboswitch (THI element)"
FT   CDS_pept        540847..541749
FT                   /transl_table=11
FT                   /gene="ddlB"
FT                   /gene_synonym="ddl"
FT                   /locus_tag="CBO0452"
FT                   /product="D-alanine--d-alanine ligase B"
FT                   /EC_number="6.3.2.4"
FT                   /note="Similar to Escherichia coli D-alanine--d-alanine
FT                   ligase B DdlB or Ddl or b0092 SWALL:DDLB_ECOLI
FT                   (SWALL:P07862) (305 aa) fasta scores: E(): 1.6e-32, 38.74
FT                   id in 302 aa"
FT                   /db_xref="GOA:A5HYZ6"
FT                   /db_xref="InterPro:IPR000291"
FT                   /db_xref="InterPro:IPR005905"
FT                   /db_xref="InterPro:IPR011095"
FT                   /db_xref="InterPro:IPR011127"
FT                   /db_xref="InterPro:IPR011761"
FT                   /db_xref="InterPro:IPR013815"
FT                   /db_xref="InterPro:IPR016185"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5HYZ6"
FT                   /protein_id="CAL82005.1"
FT                   /translation="MKIGVIMGGISTEREVSLNSGREVIKYLELLEHEIIPIIIDKKED
FT                   VMEKAKGIDFAFLALHGKFGEDGTVQSVLQTLDIPYSGCGPLTSAICMDKDMTKKILKY
FT                   ANINTADWVNVSSVENIDYEAIEKIGYPVFVKPNSGGSSVATNLVKDKEGIKEAVELAL
FT                   KYDKEVMIENYTKGEEITCCMLNGKMLPVLAIRPHAEFFDYTAKYADGGSDEVVIELEE
FT                   NLHKKVEEMALACWKELKCEVYVRVDMIVKDGIPYVLELNTLPGMTKNSLFPKSANAVG
FT                   ISFAELLNSIVKYSLEVER"
FT   misc_feature    540847..541725
FT                   /note="Pfam match to entry PF01820 Dala_Dala_ligas, D-ala
FT                   D-ala ligase, score 308.7, E-value 7.5e-90"
FT                   /inference="protein motif:Pfam:PF01820"
FT   misc_feature    541027..541062
FT                   /note="PS00843 D-alanine--D-alanine ligase signature 1."
FT                   /inference="protein motif:ProSite:PS00843"
FT   CDS_pept        541905..543047
FT                   /transl_table=11
FT                   /locus_tag="CBO0453"
FT                   /product="branched-chain amino acid transport
FT                   system,substrate-binding protein"
FT                   /note="Similar to Pseudomonas aeruginosa
FT                   leucine-,isoleucine-, valine-, threonine-, and
FT                   alanine-binding protein precursor BraC or pa1074
FT                   SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E():
FT                   3.9e-25, 29.36 id in 378 aa"
FT                   /db_xref="GOA:A5HYZ7"
FT                   /db_xref="InterPro:IPR000709"
FT                   /db_xref="InterPro:IPR028081"
FT                   /db_xref="InterPro:IPR028082"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ7"
FT                   /protein_id="CAL82006.1"
FT                   /translation="MKFAKFKKKSLIALSSLLVLGSLVGCQSNPSEKEETIKVGLVAPL
FT                   SGAMAQDGKSILNAAQLAVDEVNKEGGINKKKIELVYEDDKGEPKEAASIANKYSSDKD
FT                   IMAVMGSFSAPCTLAGIPIYNKAKIPMMGPCGSAPALSGSSEYYRKVTPSDLTTGKELS
FT                   KWMLKDMNYKKVAIIYVNNDYGKGVAESVDNFYKENGGQVVAKESYMPKTQDFGSIITK
FT                   VKSKNPDIIIMGSFYGDAGAFLKQAHNVGYNPKVAGPTPLLSKSLVDLAGKDAEGIFTI
FT                   GSFSTNLENEKVKEFAEKYKKKYNQDPSSFAAYSYDATKILIEGIKKGGNDREKINEAL
FT                   KNMGTYTGVTGNTKFEKSGDAEKNLIRFIVKDGKFVEWKK"
FT   sig_peptide     541905..542001
FT                   /locus_tag="CBO0453"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.778 between residues 33 and 34"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    541950..541982
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    542046..542069
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    542067..543041
FT                   /note="Pfam match to entry PF01094 ANF_receptor, Receptor
FT                   family ligand binding region, score 169.3, E-value 6.7e-48"
FT                   /inference="protein motif:Pfam:PF01094"
FT   CDS_pept        543051..543923
FT                   /transl_table=11
FT                   /locus_tag="CBO0454"
FT                   /product="branched-chain amino acid transport
FT                   system,permease protein"
FT                   /note="Similar to Pseudomonas aeruginosa high-affinity
FT                   branched-chain amino acid transport system permease protein
FT                   brad brad or pa1073 SWALL:BRAD_PSEAE (SWALL:P21627) (307
FT                   aa) fasta scores: E(): 5.6e-23, 37 38d in 300 aa"
FT                   /db_xref="GOA:A5HYZ8"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ8"
FT                   /protein_id="CAL82007.1"
FT                   /translation="MIIEVLVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGT
FT                   FVFFTMISIFKIPLILAIILTIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIML
FT                   EALGQLIWGTEIIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFITKSNIG
FT                   LQIRALSYNRKYAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTMGSGVMI
FT                   KAFAAAILGGIGSIPGALVGGYILGVSESLVGAYISTSYVDGIAFIILVLVLIIKPNGI
FT                   FGEEIKEKV"
FT   misc_feature    543063..543872
FT                   /note="Pfam match to entry PF02653
FT                   BPD_transp_2,Branched-chain amino acid transport system /
FT                   permease component, score 145.8, E-value 8e-41"
FT                   /inference="protein motif:Pfam:PF02653"
FT   misc_feature    order(543069..543137,543147..543215,543228..543296,
FT                   543453..543521,543609..543677,543720..543788,
FT                   543807..543875)
FT                   /note="7 probable transmembrane helices predicted for
FT                   CBO0454 by TMHMM2.0 at aa 7-29, 33-55, 60-82,
FT                   135-157,187-209, 224-246 and 253-275"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        543924..544868
FT                   /transl_table=11
FT                   /locus_tag="CBO0455"
FT                   /product="branched-chain amino acid transport
FT                   system,permease protein"
FT                   /note="Similar to Bifidobacterium longum permease of ABC
FT                   transporter for branched-chain amino acids bl1716
FT                   SWALL:Q8G3P1 (EMBL:AE014805) (358 aa) fasta scores: E():
FT                   1.7e-36, 41.1 38d in 309 aa"
FT                   /db_xref="GOA:A5HYZ9"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:A5HYZ9"
FT                   /protein_id="CAL82008.1"
FT                   /translation="MKLFKNNKIMFLIILAILLVAPFMITNQYILHIIITILLYSILSM
FT                   SLNFVSGNAGQISVGHAAFYGIGAYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIP
FT                   SLRVKGNYLCIITLGFGEIVKLILLNWDKVTGGPMGISSIPSPEFLSIFKDKNLGFYYL
FT                   ILLLFVVSFVILYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIA
FT                   GGFYATYVSFISPESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY
FT                   RMLFYGLGLVLMIVFRPDGIYGLKYRKKFTYKS"
FT   sig_peptide     543924..544107
FT                   /locus_tag="CBO0455"
FT                   /note="probabilty 0.973, with cleavage site probability
FT                   0.303 between residues 62 and 63"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(543948..544001,544011..544079,544092..544160,
FT                   544170..544238,544257..544316,544395..544463,
FT                   544557..544625,544668..544736,544773..544826)
FT                   /note="9 probable transmembrane helices predicted for
FT                   CBO0455 by TMHMM2.0 at aa 9-26, 30-52, 57-79,
FT                   83-105,112-131, 158-180, 212-234, 249-271 and 284-301"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    544008..544805
FT                   /note="Pfam match to entry PF02653
FT                   BPD_transp_2,Branched-chain amino acid transport system /
FT                   permease component, score 166.2, E-value 5.6e-47"
FT                   /inference="protein motif:Pfam:PF02653"
FT   CDS_pept        544880..545617
FT                   /transl_table=11
FT                   /locus_tag="CBO0456"
FT                   /product="branched-chain amino acid transport
FT                   system,ATP-binding protein"
FT                   /note="Similar to Bordetella bronchiseptica ABC transport
FT                   system ATP-binding protein bb0369 SWALL:CAE30867
FT                   (EMBL:BX640438) (244 aa) fasta scores: E(): 2e-32, 42.43 id
FT                   in 238 aa"
FT                   /db_xref="GOA:A5HZ00"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR032823"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ00"
FT                   /protein_id="CAL82009.1"
FT                   /translation="MNILEVKDLNINFGGITAIDNLNFSVKKGEILGVIGPNGAGKTTL
FT                   YNTITGIYKPSKGDIFLNNKKITGTKPYKISRLGIARTFQNIRLFNSLTVLENILVGRV
FT                   SELKKLVKLNPYMKEIFDILEVVGLEKVINNMASDLPYGQQRKVEIARALALSPKVLLL
FT                   DEPAAGMNNYEKQDLKNLINILREDFNITVLIIEHDMGVIMDLCDRILVLDYGKKIAEG
FT                   SPEEISNDANVIKAYMGKGIKEI"
FT   misc_feature    544964..545527
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 193.7, E-value 3.1e-55"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    544985..545008
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        545619..546320
FT                   /transl_table=11
FT                   /locus_tag="CBO0457"
FT                   /product="branched-chain amino acid transport
FT                   system,ATP-binding protein"
FT                   /note="Similar to Salmonella typhimurium, and Salmonella
FT                   typhi high-affinity branched-chain amino acid transport
FT                   ATP-binding protein LivF or LivG or stm3560 or sty4252 or
FT                   t3962 SWALL:LIVF_SALTY (SWALL:P30294) (237 aa) fasta
FT                   scores: E(): 5.5e-34, 44.87 38d in 234 aa"
FT                   /db_xref="GOA:A5HZ01"
FT                   /db_xref="InterPro:IPR003439"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ01"
FT                   /protein_id="CAL82010.1"
FT                   /translation="MLIVKDINVNYEVIPALKQISINVNEGEIVTIIGNNGSGKSTLLK
FT                   ALTAQLKYTGHISFYGESLKGMSTHKIAQRGICLVPEGRGIFPLITVEENLLLAFCNKI
FT                   NKGTKDQKLQEVYRRFPRLKERRTQLAGSLSGGEQQMLAIGRAILSSAKLILLDEPSMG
FT                   LAPIMVEEVFQTIKSINKEGTSILLIEQNASMALEVCNRGYALENGKIVLEGSTEELIK
FT                   SNFIKKIYLGR"
FT   misc_feature    545697..546245
FT                   /note="Pfam match to entry PF00005 ABC_tran, ABC
FT                   transporter, score 165.2, E-value 1.1e-46"
FT                   /inference="protein motif:Pfam:PF00005"
FT   misc_feature    545718..545741
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    546018..546062
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS_pept        546349..547125
FT                   /transl_table=11
FT                   /locus_tag="CBO0458"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Methanobacterium thermoautotrophicum
FT                   conserved protein mth526 SWALL:O26626 (EMBL:AE000835) (228
FT                   aa) fasta scores: E(): 1.6e-15, 32.33 38d in 201 aa"
FT                   /db_xref="InterPro:IPR003748"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ02"
FT                   /protein_id="CAL82011.1"
FT                   /translation="MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVN
FT                   YCYMVKMASNGREFKANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKK
FT                   VQKDITFINHLIYGIEIRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLG
FT                   GNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTL
FT                   NPTEQNYKKKEIESKCKNIESNIDIKYNENYFVNYK"
FT   misc_feature    546352..547014
FT                   /note="Pfam match to entry PF02596 DUF169, Uncharacterized
FT                   ArCR, COG2043, score 97.3, E-value 3.2e-26"
FT                   /inference="protein motif:Pfam:PF02596"
FT   CDS_pept        547527..548285
FT                   /transl_table=11
FT                   /locus_tag="CBO0459"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe1930 SWALL:Q8XJ31 (EMBL:AP003192) (256 aa) fasta
FT                   scores: E(): 6.5e-24, 34.79 38d in 250 aa"
FT                   /db_xref="GOA:A5HZ03"
FT                   /db_xref="InterPro:IPR010619"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ03"
FT                   /protein_id="CAL82012.1"
FT                   /translation="MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECM
FT                   VTAKGVFLSIIDDNNEKVTSLKKVKTRGVDLARIDRLNSFSRSLQDNPISYDEAKETLK
FT                   EIDSLPFFSLPARIVAAGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIGFFQ
FT                   FFQFFFAGFIIGILSLVAENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSG
FT                   IVKFGEAMLVVTAMGAGIATALTLGVGVKW"
FT   misc_feature    order(547905..547973,548001..548069,548082..548150,
FT                   548208..548276)
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0459 by TMHMM2.0 at aa 127-149, 159-181, 186-208 and
FT                   228-250"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        548279..548722
FT                   /transl_table=11
FT                   /locus_tag="CBO0460"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Staphylococcus aureus hypothetical
FT                   protein sav0744 or sa0699 or mw0706 SWALL:Q99VN0
FT                   (EMBL:AP003360) (164 aa) fasta scores: E(): 2.8e-14,36.29
FT                   38d in 135 aa"
FT                   /db_xref="GOA:A5HZ04"
FT                   /db_xref="InterPro:IPR024528"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ04"
FT                   /protein_id="CAL82013.1"
FT                   /translation="MVIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVY
FT                   NYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQ
FT                   NYALAYSKGFQTIAVGGAIAFGIMLSSTTVRFITKITQTKRVK"
FT   misc_feature    order(548291..548344,548357..548425,548435..548488,
FT                   548522..548581,548624..548692)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0460 by TMHMM2.0 at aa 5-22, 27-49, 53-70, 82-101 and
FT                   116-138"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        548864..550315
FT                   /transl_table=11
FT                   /locus_tag="CBO0461"
FT                   /product="GntR-family transcriptional regulator"
FT                   /note="Similar to Clostridium tetani transcriptional
FT                   regulatory protein ctc00684 SWALL:Q897P7 (EMBL:AE015938)
FT                   (481 aa) fasta scores: E(): 5.3e-110, 62 38d in 479 aa"
FT                   /db_xref="GOA:A5HZ05"
FT                   /db_xref="InterPro:IPR000524"
FT                   /db_xref="InterPro:IPR004839"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ05"
FT                   /protein_id="CAL82014.1"
FT                   /translation="MLFDIKLDKNSPVYIQISDYIKSMILKGMIRKDEKLPSTRELASM
FT                   LKVSRNTIISAYEFLEDDGFIYIRKGKGAFVSNVNIHVEEKWTVNWEKNINDYAKKAEN
FT                   LDIIKHEIPWEKGMISFKSISPDENLFDLEEFKKAFLNRFSLEGEKILNYGYAIGYRDL
FT                   INYIMKYMKNKGVDTSNKKILITNGFTEGFDIVLSSLIKKGDKILCENPTHNTAIKIMK
FT                   MHDIEIVGIDMDKDGINIDKLKETIGKNNIKLAYLVPSYHNPTGIVMSPEKRIKIYNIL
FT                   KDNNIPIIEDGFNEELRYSGDHVSPMIAFSGKGNSIIYIGSFSKVLFPGIRIGWVLGDE
FT                   KLIDYLESVKRSRNIHTSFLDQAILYEYLKSGNFEKYIKKARKIYKEKYEFALECAKKY
FT                   IPAEYITGEGGLHIFIKLKNIKSRELLKECCKRGVIFTPGDIFYVDNKGEDTFRLGISR
FT                   VSLEEIEKGFKIIGNSAKKLINNYI"
FT   misc_feature    548900..549091
FT                   /note="Pfam match to entry PF00392 gntR, Bacterial
FT                   regulatory proteins, gntR family, score 46.4, E-value
FT                   6.6e-11"
FT                   /inference="protein motif:Pfam:PF00392"
FT   misc_feature    548969..549043
FT                   /note="PS00043 Bacterial regulatory proteins, gntR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00043"
FT   misc_feature    548972..549037
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1104.000, SD 2.95 at aa 37-58, sequence
FT                   PSTRELASMLKVSRNTIISAYE"
FT   CDS_pept        550376..550945
FT                   /transl_table=11
FT                   /locus_tag="CBO0462"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani lema-like protein LemA
FT                   or ctc00358 SWALL:Q898T4 (EMBL:AE015937) (191 aa) fasta
FT                   scores: E(): 3.8e-39, 59.57 38d in 188 aa"
FT                   /db_xref="InterPro:IPR007156"
FT                   /db_xref="InterPro:IPR023353"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ06"
FT                   /protein_id="CAL82015.1"
FT                   /translation="MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDT
FT                   NLQRRSDLISNLVETVKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELSGALSR
FT                   LLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAG
FT                   MFRFSEKPYFKAEAGAGKAPKVDFSK"
FT   sig_peptide     550376..550490
FT                   /locus_tag="CBO0462"
FT                   /note="probabilty 0.992, with cleavage site probability
FT                   0.409 between residues 39 and 40"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    550376..550936
FT                   /note="Pfam match to entry PF04011 LemA, LemA family,score
FT                   296.1, E-value 4.5e-86"
FT                   /inference="protein motif:Pfam:PF04011"
FT   misc_feature    550394..550453
FT                   /note="1 probable transmembrane helix predicted for CBO0462
FT                   by TMHMM2.0 at aa 7-26"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        550955..551791
FT                   /transl_table=11
FT                   /locus_tag="CBO0463"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta
FT                   scores: E(): 1.1e-32, 47.1 38d in 276 aa"
FT                   /db_xref="GOA:A5HZ07"
FT                   /db_xref="InterPro:IPR007621"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ07"
FT                   /protein_id="CAL82016.1"
FT                   /translation="MENFFEKYLSRRRLTFVLIMTLIMTFPMLIKAQTNFPQPTSLKYV
FT                   NDYVGVMDDATRGEIVAIGDELEKKTGAQAIVVVINSLGGSDIESYANNLFRQWGIGQR
FT                   NKNNGLMILLSVNDRKWRVEVGKGLEGAITDSYSSRVMDDVAKPLLKEGKYGEAIKAAY
FT                   STFVGDIGNERNVTLEQNDAIQASQQDSEGISWFGLIMCFIIFIIVIVVIIAAAGSGSN
FT                   NRGYYGRDRYRRDHWDDDHFHHGGGFGGFGDGGSSGGDSGGFGGGSSGGGGSSGGW"
FT   sig_peptide     550955..551048
FT                   /locus_tag="CBO0463"
FT                   /note="probabilty 0.998, with cleavage site probability
FT                   0.954 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(550991..551044,551543..551611)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0463 by TMHMM2.0 at aa 13-30 and 197-219"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    551189..551437
FT                   /note="Pfam match to entry PF04536 DUF477, Protein of
FT                   unknown function (DUF477), score 100.0, E-value 4.7e-27"
FT                   /inference="protein motif:Pfam:PF04536"
FT   CDS_pept        552310..553170
FT                   /transl_table=11
FT                   /locus_tag="CBO0464"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta
FT                   scores: E(): 3.6e-39, 52.55 38d in 274 aa"
FT                   /db_xref="GOA:A5HZ08"
FT                   /db_xref="InterPro:IPR007621"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ08"
FT                   /protein_id="CAL82017.1"
FT                   /translation="MRKFINRNFNKLGLTVILIITLIISSPILTKAEKNFPKPTSLKYV
FT                   NDYSRVIDDATKEYIVSVGNELEQKTGAQMTVVVIDSLEGSDIESYANSLFRQWGLGQK
FT                   GKDNGVLILLSIKDKKWRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMKKAY
FT                   SVFADDVAKEYNVTLEKNEKVKVPEKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRT
FT                   SIWDLIFLNSLFSNRRNRWDDDDDDGFGGGGFGGFGGFGGGSSGGGFGGFGGGSSGGGG
FT                   SSGGW"
FT   sig_peptide     552310..552403
FT                   /locus_tag="CBO0464"
FT                   /note="probabilty 1.000, with cleavage site probability
FT                   0.680 between residues 32 and 33"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(552343..552396,552886..552945)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0464 by TMHMM2.0 at aa 12-29 and 193-212"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    552544..552792
FT                   /note="Pfam match to entry PF04536 DUF477, Protein of
FT                   unknown function (DUF477), score 91.5, E-value 1.7e-24"
FT                   /inference="protein motif:Pfam:PF04536"
FT   repeat_region   553221..553250
FT                   /rpt_family="CB.6"
FT                   /rpt_type=INVERTED
FT                   /rpt_unit_seq="gtgtctcaaaattaaatctatttttagaca"
FT                   /inference="ab initio prediction:REPuter"
FT   CDS_pept        553444..554337
FT                   /transl_table=11
FT                   /locus_tag="CBO0465"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus anthracis mutt/nudix family
FT                   protein ba3685 SWALL:Q81Y72 (EMBL:AE017035) (147 aa) fasta
FT                   scores: E(): 1.4e-06, 35.29 38d in 136 aa"
FT                   /db_xref="GOA:A5HZ09"
FT                   /db_xref="InterPro:IPR000086"
FT                   /db_xref="InterPro:IPR015797"
FT                   /db_xref="InterPro:IPR020084"
FT                   /db_xref="InterPro:IPR020476"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ09"
FT                   /protein_id="CAL82018.1"
FT                   /translation="MLKRDTRVQIIIVENGKYILLKHWVKLENRYFWALPGGGRENGES
FT                   LEEAAIREAKEETGLDIELFPLIYESLPPIKNSMYKNMVTFIGYPVKGEAKVGYDPEEE
FT                   LKDLYGLVDIKWQDLRDKEGLTDVTIRDVGGILDRLQAENIEEEKIFLIYGQKDNVREY
FT                   LVLNNINNIKDQCSSPYINKNVSDNEIKFLCLNKDNEYSFCGNNCSLNSKRCSWEVYLQ
FT                   EILGIKLKNVTEQKKLGIFLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKEN
FT                   ISEDLVRIFTFIKDNI"
FT   misc_feature    553450..553803
FT                   /note="Pfam match to entry PF00293 NUDIX, NUDIX
FT                   domain,score 45.7, E-value 1.1e-10"
FT                   /inference="protein motif:Pfam:PF00293"
FT   misc_feature    553744..553773
FT                   /note="PS00215 Mitochondrial energy transfer proteins
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00215"
FT   CDS_pept        554471..554953
FT                   /transl_table=11
FT                   /locus_tag="CBO0466"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0713 SWALL:Q8XMH6 (EMBL:AP003187) (154 aa) fasta
FT                   scores: E(): 3, 21.93 38d in 155 aa"
FT                   /db_xref="GOA:A5HZ10"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ10"
FT                   /protein_id="CAL82019.1"
FT                   /translation="MDVLKGILLILVGVTFVFWIVLTFINLWYKSKEGGKVLLNIKRGI
FT                   ERNIMILMSLIIILFSLLNDNSNTYIEIVIGIVILYNGVERFEIMENGIFIEGNFKKWE
FT                   DIESCEWHERLDHTLIIRGKEDVDYLRRFNTIKLKLKQEEQEQVFQIINKKIAQVS"
FT   misc_feature    order(554489..554557,554600..554659)
FT                   /note="2 probable transmembrane helices predicted for
FT                   CBO0466 by TMHMM2.0 at aa 7-29 and 44-63"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        555129..555653
FT                   /transl_table=11
FT                   /locus_tag="CBO0467"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Thermotoga maritima hypothetical protein
FT                   Tm0858 SWALL:Q9WZW2 (EMBL:AE001752) (168 aa) fasta scores:
FT                   E(): 9.9e-15, 35.4 38d in 161 aa"
FT                   /db_xref="GOA:A5HZ11"
FT                   /db_xref="InterPro:IPR024529"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ11"
FT                   /protein_id="CAL82020.1"
FT                   /translation="MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILI
FT                   AGFILSPYFALAVGALTPLLSHLFTGMPPFPFVYVMVVELLTYGVVISILYNKKKMGIY
FT                   PSLIIGMLSGRLANILCNYLVLHLIMAKPFKFPAVLAGLFVKGLPGIIIQLILIPILVK
FT                   SLGKVELGKAV"
FT   sig_peptide     555129..555306
FT                   /locus_tag="CBO0467"
FT                   /note="probabilty 0.761, with cleavage site probability
FT                   0.295 between residues 60 and 61"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    order(555156..555215,555234..555302,555345..555413,
FT                   555450..555518,555546..555614)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0467 by TMHMM2.0 at aa 10-29, 36-58, 73-95, 108-130 and
FT                   140-162"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        555655..556245
FT                   /transl_table=11
FT                   /locus_tag="CBO0468"
FT                   /product="putative AraC-family transcriptional regulator"
FT                   /note="Similar to Thermoplasma volcanium hypothetical
FT                   protein tv0916 tv0916 or tvg0944468 SWALL:Q97A94
FT                   (EMBL:AP000994) (245 aa) fasta scores: E(): 1.5e-05,27.95
FT                   38d in 186 aa, and to Escherichia coli, Escherichia coli
FT                   O157:H7, and Shigella flexneri ubiquinone/menaquinone
FT                   biosynthesis methyltransferase ubie ubie or b3833 or z5355
FT                   or ecs4763 or sf3911 or s3843 SWALL:UBIE_ECOLI
FT                   (SWALL:P27851) (251 aa) fasta scores: E(): 1.6e-05, 30 38d
FT                   in 170 aa"
FT                   /db_xref="InterPro:IPR025714"
FT                   /db_xref="InterPro:IPR026669"
FT                   /db_xref="InterPro:IPR029063"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ12"
FT                   /protein_id="CAL82021.1"
FT                   /translation="MNDKEFFNNLADKWDDMCFHSKEKIEYILSKANLKEGDRVLDIGS
FT                   GTGVLIPYLENIISNNGDIAAIDIAENMLKVSKEKNKYSNLKFIVGDFLEYKSKKTFNC
FT                   ITAYSCYPHFKDKDKLAHRAYELLEEGGRLVIAHSESKEKINSRHKDVDHKIKSHILPK
FT                   VKYTAELMEKHNFRTIYTEDNEECYIYIGARNK"
FT   misc_feature    555724..555852
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00041"
FT   CDS_pept        complement(556331..556570)
FT                   /transl_table=11
FT                   /locus_tag="CBO0469"
FT                   /product="putative DNA-binding protein"
FT                   /note="Similar to Bacillus cereus transcriptional
FT                   regulator, cro/ci family bc2181 SWALL:Q81E15
FT                   (EMBL:AE017005) (75 aa) fasta scores: E(): 1.6e-16, 73.52
FT                   id in 68 aa"
FT                   /db_xref="GOA:A5HZ13"
FT                   /db_xref="InterPro:IPR001387"
FT                   /db_xref="InterPro:IPR010982"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ13"
FT                   /protein_id="CAL82022.1"
FT                   /translation="MGIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRF
FT                   STLEAICRELNCQPGDILEYKEDPSEADKEDELN"
FT   misc_feature    complement(556385..556552)
FT                   /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix,
FT                   score 29.9, E-value 6.3e-06"
FT                   /inference="protein motif:Pfam:PF01381"
FT   misc_feature    complement(556460..556525)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1599.000, SD 4.63 at aa 16-37, sequence
FT                   MSLKELAEKINLTNANLSILKN"
FT   CDS_pept        complement(556591..557073)
FT                   /transl_table=11
FT                   /locus_tag="CBO0470"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Bacillus cereus hypothetical membrane
FT                   spanning protein bc2987 SWALL:Q813G4 (EMBL:AE017007) (160
FT                   aa) fasta scores: E(): 0.00041, 30 38d in 170 aa"
FT                   /db_xref="GOA:A5HZ14"
FT                   /db_xref="InterPro:IPR021354"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ14"
FT                   /protein_id="CAL82023.1"
FT                   /translation="MKEGFSIKFIKVLLMILIFGCTCMLGKYGFMTLFAPEKIPDGFPN
FT                   IILFLFTTGVYIVVAWNLLKIVFSIDSTPFSLKNVKNFKIIGYLMLFLSLIDAIESIVN
FT                   FKKSDDLVALGIILDKGIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKNENDLTI"
FT   misc_feature    complement(order(556636..556704,556762..556821,
FT                   556882..556941,556969..557037))
FT                   /note="4 probable transmembrane helices predicted for
FT                   CBO0470 by TMHMM2.0 at aa 13-35, 45-64, 85-104 and 124-146"
FT                   /inference="protein motif:TMHMM:2.0"
FT   repeat_region   557214..557349
FT                   /note="intergenic repeat 1"
FT   CDS_pept        557308..557442
FT                   /transl_table=11
FT                   /locus_tag="CBO0471"
FT                   /product="hypothetical protein"
FT                   /note="No significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ15"
FT                   /protein_id="CAL82024.1"
FT                   /translation="MGVKTPSEAKNSVYYKYNNAIFVRALFFIDRKGITFISVTIVIF"
FT   misc_feature    557368..557436
FT                   /note="1 probable transmembrane helix predicted for CBO0471
FT                   by TMHMM2.0 at aa 21-43"
FT                   /inference="protein motif:TMHMM:2.0"
FT   repeat_region   557578..557712
FT                   /note="intergenic repeat 1"
FT   CDS_pept        557819..559048
FT                   /transl_table=11
FT                   /gene="sbcD"
FT                   /locus_tag="CBO0472"
FT                   /product="nuclease subunit D"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 nuclease sbccd subunit d sbcd or b0398 or z0496 or
FT                   ecs0448 SWALL:SBCD_ECOLI (SWALL:P13457) (400 aa) fasta
FT                   scores: E(): 4.8e-08, 27.7 38d in 397 aa, and to Bacillus
FT                   subtilis exonuclease sbcd homolog sbcd or bsu10640
FT                   SWALL:SBCD_BACSU (SWALL:P23479) (391 aa) fasta scores: E():
FT                   2.5e-17, 39.9 38d in 406 aa"
FT                   /db_xref="GOA:A5HZ16"
FT                   /db_xref="InterPro:IPR004593"
FT                   /db_xref="InterPro:IPR004843"
FT                   /db_xref="InterPro:IPR026843"
FT                   /db_xref="InterPro:IPR029052"
FT                   /db_xref="InterPro:IPR041796"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ16"
FT                   /protein_id="CAL82025.1"
FT                   /translation="MRILHTSDWHLGKNLEGFSRMDEQERFIEDFINIVDKNNIDMVII
FT                   AGDIYDNGNPPARAEKMFYDCIKKISNKGERLVLIIAGNHDNPERLVAASSLAYDEGII
FT                   LMGTPKTIVPKGKYGNFKVINSDLACLEIGVKEEKAVIISLPYPSEKRLNEILSKEMDN
FT                   DEDRRKTYSERIGDIFSNLQEKYYKDNTVNLAISHIFVNGSEETDSERPIQLGGSLSVD
FT                   VDKLPKKAQYIGLGHLHKPQKVRGIDNAYYSGSPLPYSKSERGYSKGCKIIDVHPGEKA
FT                   VIEEVYFNNYKPIEVWHCNGIKEAINKCEENKEKDMWLYLHIKTKEYISTEDIKALKEI
FT                   KKDIVEIVPEIEEKREETFNGNIKEKSMAELFKSFYLNQRGIEASEELMDLFLSIAQEE
FT                   DEYETEETCD"
FT   misc_feature    557819..558541
FT                   /note="Pfam match to entry PF00149
FT                   Metallophos,Calcineurin-like phosphoesterase, score 48.5,
FT                   E-value 1.6e-11"
FT                   /inference="protein motif:Pfam:PF00149"
FT   CDS_pept        559023..562553
FT                   /transl_table=11
FT                   /gene="sbcC"
FT                   /locus_tag="CBO0473"
FT                   /product="exonuclease"
FT                   /note="Similar to Escherichia coli exonuclease sbcc sbcc or
FT                   rmua or b0397 SWALL:SBCC_ECOLI (SWALL:P13458) (1048 aa)
FT                   fasta scores: E(): 8.6e-10, 21.48 38d in 1210 aa"
FT                   /db_xref="GOA:A5HZ17"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR038729"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ17"
FT                   /protein_id="CAL82026.1"
FT                   /translation="MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSIL
FT                   DAITMALYGDIARDSTQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKT
FT                   TAARLVKNTYEEEEIIADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKS
FT                   RRDMLERIFGLEKYGKKLLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYE
FT                   NLLKEKSKIAKEKEESNKLYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEK
FT                   GKNALSVKPYIDELSKIESDRNINEEELQTAMEQLRNIDLNLKNIEEEYKKASEDKEEK
FT                   IPLLMQKENNLLQAIEIKKKVEVIKRERADLVQKYKEKESLIRNKNIDKKHIEENINKI
FT                   SKEVKLKEEEINSLKIDGDRREKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYE
FT                   LKYKDTLETQRDINKKLEYVSGKREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKIN
FT                   DRKQELEKNLKEKQVVKLNLEKQHKEILEILKLKEETIVSLEEKIKDIEKMDMASILAT
FT                   NLKDQEPCPVCGSMHHIKLAKKVDIKELEILKEDHRNAFKKLENIKIEEKEKNILLISV
FT                   EKEEELILEELENLKEQLKGRNLEDLRGELQKEKNDFEKLNENIKDWEKEKLILEENIN
FT                   KLQKEKNDIDKEEAKNHEAISKEKELIASIKKDMEEREILFKEKEKEYLNLKEEIKVSN
FT                   VEEEISRVRASDKKIEEYNKVIKNEREILESENNKREETIKQINIMEIELGKIIEAGKE
FT                   KKNFIDKEEEEIKKLNVGEISIEHLDQVKKSIGNIKEKEEILKSKLELEGKNREILWKN
FT                   KISKEQIKINLEKLHNEKYIQLNKVLEENKFHTLEDAKLMLICKEEIKELEKEIEEFEK
FT                   EYNSLNINIERVNKKLKGERIEEGSWKDIRLKKENKEKELEDIIKNIVIEEKLISDMEN
FT                   NIKSLKNLLDEKEKVAHKKALLEDIDKLVQGNKFVEFVAMNQLEYIVFEASKRLKDITR
FT                   GRYALELDCNGNFTMRDDFNGGGIRPTNTLSGGETFLTSLALALALSSQIQLKGSSPLE
FT                   FFFLDEGFGTLDSELLDTVMTSLENLRSDRLSVGIISHVEELKNRVPIKLIVDPAVPGE
FT                   GGSKIKIEYS"
FT   misc_feature    559023..559166
FT                   /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N
FT                   terminal domain, score 19.7, E-value 1.8e-05"
FT                   /inference="protein motif:Pfam:PF02463"
FT   misc_feature    559125..559148
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS_pept        562581..563129
FT                   /transl_table=11
FT                   /locus_tag="CBO0474"
FT                   /product="putative ADP-ribose pyrophosphatase"
FT                   /EC_number="3.6.1.13"
FT                   /note="Similar to Bacillus subtilis ADP-ribose
FT                   pyrophosphatase nudf or bsu23610 SWALL:ADPP_BACSU
FT                   (SWALL:P54570) (185 aa) fasta scores: E(): 0.00014, 27.54
FT                   id in 167 aa, and to Homo sapiens ADP-sugar pyrophosphatase
FT                   ysa1h nudt5 SWALL:NUD5_HUMAN (SWALL:Q9UKK9) (219 aa) fasta
FT                   scores: E(): 2.2e-13, 35.91 id in 181 aa"
FT                   /db_xref="GOA:A5HZ18"
FT                   /db_xref="InterPro:IPR000086"
FT                   /db_xref="InterPro:IPR015797"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ18"
FT                   /protein_id="CAL82027.1"
FT                   /translation="MKKLEEKILYEGKWISFKKISYLNNEEKLLKWEAVERTNTTKAVV
FT                   IVAKLVPTERYVFIKQYRPAIDNYVIGFPAGLLEQEDVEAEAKRELKEETGYVGRVIDI
FT                   SPEIRPNPALLTDYTILVQMEIDENDELNKNPKQELEPSEDIEVMLMSKEESRDFLIEQ
FT                   KNNGVDVGVGPWYIFGFKL"
FT   misc_feature    562698..563066
FT                   /note="Pfam match to entry PF00293 NUDIX, NUDIX
FT                   domain,score 19.7, E-value 0.0054"
FT                   /inference="protein motif:Pfam:PF00293"
FT   CDS_pept        563940..564791
FT                   /transl_table=11
FT                   /locus_tag="CBO0475"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Clostridium tetani transporter ctc01333
FT                   SWALL:Q895E3 (EMBL:AE015940) (289 aa) fasta scores: E():
FT                   6.5e-43, 38.21 38d in 280 aa"
FT                   /db_xref="GOA:A5HZ19"
FT                   /db_xref="InterPro:IPR003740"
FT                   /db_xref="InterPro:IPR015867"
FT                   /db_xref="InterPro:IPR019264"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ19"
FT                   /protein_id="CAL82028.1"
FT                   /translation="MHFKKENVKRLLLVMMGSLIYAIGVNMFLIPHKLLSGGVAGIAIM
FT                   LQYLTDIQSGYYILLINIPIFLIAFKEVDLDFGIFSFVGMISMSSFLILSRNYMDFYAM
FT                   NDILISCICGGVLSGAGMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCVVVT
FT                   IGALIGSFEVAVYTMISMFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVG
FT                   ATIMYGEGAYSGAKRKIIYCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAA
FT                   AF"
FT   sig_peptide     563940..564003
FT                   /locus_tag="CBO0475"
FT                   /note="probabilty 0.780, with cleavage site probability
FT                   0.320 between residues 22 and 23"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    563967..564215
FT                   /note="Pfam match to entry PF02588 DUF161, Uncharacterized
FT                   BCR, YitT family COG1284, score 88.9, E-value 1.1e-23"
FT                   /inference="protein motif:Pfam:PF02588"
FT   misc_feature    order(563973..564032,564090..564149,564168..564221,
FT                   564249..564317,564408..564476)
FT                   /note="5 probable transmembrane helices predicted for
FT                   CBO0475 by TMHMM2.0 at aa 12-31, 51-70, 77-94, 104-126 and
FT                   157-179"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    564258..564503
FT                   /note="Pfam match to entry PF02588 DUF161, Uncharacterized
FT                   BCR, YitT family COG1284, score 66.4, E-value 6.4e-17"
FT                   /inference="protein motif:Pfam:PF02588"
FT   CDS_pept        complement(564883..565044)
FT                   /transl_table=11
FT                   /locus_tag="CBO0476"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac3540 SWALL:Q97DD8 (EMBL:AE007850) (53 aa) fasta
FT                   scores: E(): 1.8e-13, 60 38d in 50 aa"
FT                   /db_xref="InterPro:IPR011437"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ20"
FT                   /protein_id="CAL82029.1"
FT                   /translation="MDHNNSIGCSVHECKYHAQNIDYCTLNKIQVTKHTHEAESVESTD
FT                   CGSFEFKH"
FT   CDS_pept        565256..565621
FT                   /transl_table=11
FT                   /locus_tag="CBO0477"
FT                   /product="ArsR-family transcriptional regulator"
FT                   /note="Similar to Synechocystis sp. transcriptional
FT                   repressor smtb homolog smtb or ziar or sll0792
FT                   SWALL:SMTB_SYNY3 (SWALL:Q55940) (132 aa) fasta scores: E():
FT                   7.6e-17, 37.06 38d in 116 aa"
FT                   /db_xref="GOA:A5HZ21"
FT                   /db_xref="InterPro:IPR001845"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR018334"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR036390"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ21"
FT                   /protein_id="CAL82030.1"
FT                   /translation="MDKEKQIDTCTCNIIHHDVVDKVKDNMIEEDKAQDLGDFFKVLSE
FT                   PTRIKILYALSSSEMCVCDISNLLNMTQSAVSHQLKVLRTARLIKFRKEGKVVYYSLDD
FT                   SHVENVFKQGLEHIMHR"
FT   misc_feature    565373..565606
FT                   /note="Pfam match to entry PF01022 HTH_5, Bacterial
FT                   regulatory protein, arsR family, score 113.0, E-value
FT                   6.1e-31"
FT                   /inference="protein motif:Pfam:PF01022"
FT   misc_feature    565433..565498
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1639.000, SD 4.77 at aa 60-81, sequence
FT                   MCVCDISNLLNMTQSAVSHQLK"
FT   misc_feature    565436..565492
FT                   /note="PS00846 Bacterial regulatory proteins, arsR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00846"
FT   CDS_pept        565697..567925
FT                   /transl_table=11
FT                   /locus_tag="CBO0478"
FT                   /product="putative zinc-transporting ATPase"
FT                   /EC_number="3.6.3.5"
FT                   /note="Similar to Synechocystis sp. zinc-transporting
FT                   ATPase ZiaA or slr0798 SWALL:ATZN_SYNY3 (SWALL:Q59998) (721
FT                   aa) fasta scores: E(): 7.1e-108, 44.69 38d in 745 aa,and to
FT                   Helicobacter pylori cadmium, zinc and cobalt transporting
FT                   ATPase CadA or hp0791 SWALL:HMCT_HELPY (SWALL:Q59465) (686
FT                   aa) fasta scores: E(): 8.6e-88, 39.43 id in 738 aa"
FT                   /db_xref="GOA:A5HZ22"
FT                   /db_xref="InterPro:IPR001757"
FT                   /db_xref="InterPro:IPR006121"
FT                   /db_xref="InterPro:IPR008250"
FT                   /db_xref="InterPro:IPR018303"
FT                   /db_xref="InterPro:IPR023214"
FT                   /db_xref="InterPro:IPR023298"
FT                   /db_xref="InterPro:IPR023299"
FT                   /db_xref="InterPro:IPR027256"
FT                   /db_xref="InterPro:IPR036163"
FT                   /db_xref="InterPro:IPR036412"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ22"
FT                   /protein_id="CAL82031.1"
FT                   /translation="MIIKKKLLLKGLHCANCATKIERAVQKLNIIEEANYNFNNSTLII
FT                   NLEETHKDSIIKTIQEIVDRIEPGVKVVDKENLKRTVVHAPVKNSSNLKMQNNKEENLK
FT                   LDKKENSYEHNHDHSHGHSHDGEDSDELEKKTLIRIISGVVLLILATVLKSKETLSIGL
FT                   YLTSYVLIGGKVILSSIRNISKGQVFDENFLMAVATVAAIGVKQYPEAVAVMLFYEVGE
FT                   FLQDKAVNKSRKSITALMNIRPDYANLVRGEDIEVVSPEDINIDDIIMVKPGEKIPLDG
FT                   IVVEGQSFVDTSAITGESLISEVSKDSNVLSGYINKNGVIKIKVTKTFGESTVSKILEL
FT                   TENASATKANTEKFITKFARYYTPVVVFAALALAVIPTLILKDPDISKWIYRAAVFLVV
FT                   SCPCALVISIPLSFFAGIGGASKKGVLIKAGTALEALNDADTIVFDKTGTLTKGVFKVS
FT                   KIDSEEGVNTEELIEYAAYVESYSNHPIAKSILKYYEKTIDNKRIEGYEEIVARGVTAY
FT                   IDGKKVYAGNNKLMEELNINYKKAQEDGVILYIALEDKYIGYIVINDEIKKDSKETIKS
FT                   LKDIGIKKAAMLTGDRKSTANNIGTFLGMDEIYSELLPQEKVEKMQSLKSKTSKDGKIV
FT                   FVGDGVNDAPVLAMSDIGVSMGGLGSDAAIEASDLVLMSDEPSKLVDAIKIARKTHKIV
FT                   WQNIIIVLIIKFAVLALAVMGKSTMWMAVFADVGVALIAVINALRILK"
FT   misc_feature    565712..565912
FT                   /note="Pfam match to entry PF00403
FT                   HMA,Heavy-metal-associated domain, score 32.2, E-value
FT                   1.3e-06"
FT                   /inference="protein motif:Pfam:PF00403"
FT   misc_feature    order(566102..566155,566168..566236,566768..566836,
FT                   566879..566947,567773..567841,567851..567919)
FT                   /note="6 probable transmembrane helices predicted for
FT                   CBO0478 by TMHMM2.0 at aa 136-153, 158-180,
FT                   358-380,395-417, 693-715 and 719-741"
FT                   /inference="protein motif:TMHMM:2.0"
FT   misc_feature    566333..567001
FT                   /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2
FT                   ATPase, score 256.3, E-value 4.4e-74"
FT                   /inference="protein motif:Pfam:PF00122"
FT   misc_feature    567011..567676
FT                   /note="Pfam match to entry PF00702 Hydrolase, haloacid
FT                   dehalogenase-like hydrolase, score 91.5, E-value 1.8e-24"
FT                   /inference="protein motif:Pfam:PF00702"
FT   misc_feature    567029..567049
FT                   /note="PS00154 E1-E2 ATPases phosphorylation site."
FT                   /inference="protein motif:ProSite:PS00154"
FT   misc_feature    567824..567847
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   tRNA            568345..568419
FT                   /gene="tRNA Glu (CTC)"
FT                   /note="Cove score 70.26"
FT                   /inference="nucleotide motif:tRNAscanSE"
FT   CDS_pept        568546..568782
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="CBO0479"
FT                   /product="putative prophage protein (partial)"
FT                   /note="Similar to Lactobacillus plantarum prophage lp1
FT                   protein 18 lp_0641 SWALL:Q88YV1 (EMBL:AL935253) (295 aa)
FT                   fasta scores: E(): 1.4, 23.61 38d in 72 aa"
FT                   /note="Also similar to N-terminal region of CBO2550 (82.8
FT                   id)."
FT                   /note="was marked partial"
FT                   /db_xref="PSEUDO:CAL82032.1"
FT   repeat_region   complement(568619..568650)
FT   CDS_pept        join(568746..568841,568859..568954)
FT                   /transl_table=11
FT                   /locus_tag="CBO0479A"
FT                   /product="putative prophage protein (partial)"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ24"
FT                   /protein_id="CAL82033.1"
FT                   /translation="MLCNTSLFKSFLEEYNGCEARMMAVLNVSMKIMKGELEFIRCGKY
FT                   DYCKITKELKEIIHYKKL"
FT   repeat_region   complement(568761..568792)
FT   repeat_region   complement(568912..568945)
FT   CDS_pept        569663..570010
FT                   /transl_table=11
FT                   /locus_tag="CBO0480"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum hypothetical
FT                   protein Cac1923 SWALL:Q97HT4 (EMBL:AE007698) (110 aa) fasta
FT                   scores: E(): 0.00019, 36.27 38d in 102 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ25"
FT                   /protein_id="CAL82034.1"
FT                   /translation="MTPIEIMEKIGACQRGLTKGNIELKALGVKKARAEHDYRIALRKE
FT                   ILRLRQLENQPATIINDLAKGKEDIAKLRLERDIAETNYSVYIESMRNLRLEIEAYRSF
FT                   LTWERVELKNT"
FT   CDS_pept        complement(570029..570178)
FT                   /transl_table=11
FT                   /locus_tag="CBO0481"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens hypothetical
FT                   protein Cpe0253 cpe0253 SWALL:Q8XNS9 (EMBL:AP003186) (67
FT                   aa) fasta scores: E(): 0.0044, 76.92 38d in 26 aa"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ26"
FT                   /protein_id="CAL82035.1"
FT                   /translation="MSNLNSLELQNLPHLIGAHETIADKLNKIRVKQSIIIYIRKEEVF
FT                   FTSL"
FT   CDS_pept        570696..571505
FT                   /transl_table=11
FT                   /locus_tag="CBO0482"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus halodurans hypothetical protein
FT                   Bh1562 SWALL:Q9KCK9 (EMBL:AP001512) (268 aa) fasta scores:
FT                   E(): 4.7e-46, 45.14 38d in 268 aa"
FT                   /db_xref="InterPro:IPR021328"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ27"
FT                   /protein_id="CAL82036.1"
FT                   /translation="MKISNIKEITLFEHHFWLQILGDHSRFILNSLSPKEKSFIEEANR
FT                   FKNLFDNLLKKSKQSLSEEELFALNNHAYNAAMKIREFKLDIIDRQITDKIVISLPPTF
FT                   INHMVNEVDEYIFILTKLMKGNVSNIGPIHLHLLWLPDGAGHASNIASSLDITEKELIK
FT                   KSNQYSKKFNNLYLRTIEYNGYTRTGICDFPALDSLNNNADETMSCFKEFLNELKKGVI
FT                   EKKILGTIVPLVPDHMFREECYYLTKLSMVSNIKKPECDPTKSRVES"
FT   CDS_pept        572462..573838
FT                   /transl_table=11
FT                   /locus_tag="CBO0483"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium perfringens probable
FT                   phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8
FT                   (EMBL:AP003191) (459 aa) fasta scores: E(): 2.2e-118, 69.71
FT                   38d in 459 aa"
FT                   /db_xref="GOA:A5HZ28"
FT                   /db_xref="InterPro:IPR002716"
FT                   /db_xref="InterPro:IPR003714"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR029060"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ28"
FT                   /protein_id="CAL82037.1"
FT                   /translation="MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNY
FT                   DLGANARHAARIIDKLRKDGSLIDGIVLPGGGTLRVEMNHYDVKLPPSWDKNKPDNRII
FT                   QVCKGLKEKGEEVVLITKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFASHS
FT                   TLESFYKNKYMDVESLFFYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVV
FT                   PLFYKDVKPLGISPRNIGQKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVM
FT                   EEGEDGYRKILICRPNVTMDEDIGFLPGTEEEKIMPFMRPIFDNLEILVDSDEKERYKN
FT                   EKELYDKIKELFDRRIITTEAVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGT
FT                   KLILVGDPDQIDQPFLDSRSNGLCYASEKMKGSKLCYQVTLKDHECERSPLAYEGAKRL
FT                   "
FT   misc_feature    572819..573820
FT                   /note="Pfam match to entry PF02562 PhoH, PhoH-like protein,
FT                   score -21.7, E-value 1.6e-11"
FT                   /inference="protein motif:Pfam:PF02562"
FT   CDS_pept        574106..575110
FT                   /transl_table=11
FT                   /locus_tag="CBO0484"
FT                   /product="putative exported protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00791 SWALL:Q897E9 (EMBL:AE015938) (335 aa) fasta
FT                   scores: E(): 1.1e-77, 64.47 38d in 335 aa"
FT                   /db_xref="GOA:A5HZ29"
FT                   /db_xref="InterPro:IPR018711"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ29"
FT                   /protein_id="CAL82038.1"
FT                   /translation="MENKEKKSKNKKFSFKIFLYFIIFELFFTAATAPFIIFHGPFKNV
FT                   KKTMVGAAMTTLKHQYIAKTFLSDAKIKEILGEDSIQTIKQDKNSVLKFENKHDSTIER
FT                   YDISYGKKFKGYMLVVHDPSRVKVGYSSKLPVQGELTSQIARNKRAVAAINAGGFTDKS
FT                   ANSKWTGTGGNVEGVIISKGEVKYNSNKQGEFTGDVAAITKKGALVVGKHSIQELKDLN
FT                   VQEAITFGPALVVKGQGTITSGDGGWGMAPRTAIGQREDGAILMLVIDGRQASSLGATL
FT                   KDVQDIMLQYDAYTATNLDGGSSTTMYHEGEVINNPANSLGERSVPSILYVEP"
FT   sig_peptide     574106..574259
FT                   /locus_tag="CBO0484"
FT                   /note="probabilty 0.758, with cleavage site probability
FT                   0.343 between residues 52 and 53"
FT                   /inference="protein motif:SignalP:2.0"
FT   misc_feature    574154..574222
FT                   /note="1 probable transmembrane helix predicted for CBO0484
FT                   by TMHMM2.0 at aa 17-39"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        575120..576136
FT                   /transl_table=11
FT                   /locus_tag="CBO0485"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium tetani conserved protein
FT                   ctc00792 SWALL:Q897E8 (EMBL:AE015938) (343 aa) fasta
FT                   scores: E(): 1e-48, 40.81 38d in 343 aa"
FT                   /db_xref="GOA:A5HZ30"
FT                   /db_xref="InterPro:IPR011042"
FT                   /db_xref="InterPro:IPR015943"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ30"
FT                   /protein_id="CAL82039.1"
FT                   /translation="MKVVKKIILWVMISLTLQFAGLFYIDKYFLASGGTRIKAKKVTNT
FT                   GTENKDYDVNIPENVEELDVSFNGKYISYFKDNKLNIISTKNGEKKNIEFDSKKDKLEY
FT                   IWLSDRNRIIYAENKEGQVLLNSYDVDKDQKDKICEFNFESSSAKIEDIKAAPLMNLIY
FT                   VKVNVGGNNNRLYSVNIMKEKDRIDIMTEAVGDMNIIPHEDILIYEDKINKKIFATHNE
FT                   SSINIGGVTSPKLLSIDDNDNVYIGELKEDEVVKIYYGNVKNNTSTWKALDIPNGAKVK
FT                   DIYVSPLGSVYVNDDLKGVIKEISTGKETKYSGVMMKMYIDGVASISDGKLVKTKFK"
FT   misc_feature    575138..575194
FT                   /note="1 probable transmembrane helix predicted for CBO0485
FT                   by TMHMM2.0 at aa 7-25"
FT                   /inference="protein motif:TMHMM:2.0"
FT   CDS_pept        576447..576629
FT                   /transl_table=11
FT                   /gene="SagA"
FT                   /locus_tag="CBO0486"
FT                   /product="putative cytolysin"
FT                   /note="Similar to Streptococcus iniae bacteriocin-like
FT                   prepropeptide SagA SWALL:Q8GP18 (EMBL:AF465842) (54 aa)
FT                   fasta scores: E(): 6.2e-06, 50 38d in 52 aa, and to
FT                   Streptococcus pyogenes, Streptococcus pyogenes streptolysin
FT                   S associated protein SagA or spy0738 or spym18_0799 or
FT                   spym3_0480 or sps1374 SWALL:O69194 (EMBL:AF067723) (53 aa)
FT                   fasta scores: E(): 0.00037, 42 38d in 50 aa"
FT                   /db_xref="InterPro:IPR019891"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ31"
FT                   /protein_id="CAL82040.1"
FT                   /translation="MKDMLKFNEHVLTTTNNSNNKVTVAPGSCCCCSCCCCVSVSVGGG
FT                   SASTGGGAAAGQGGN"
FT   sig_peptide     576447..576585
FT                   /gene="SagA"
FT                   /locus_tag="CBO0486"
FT                   /note="probabilty 0.999, with cleavage site probability
FT                   0.381 between residues 47 and 48"
FT                   /inference="protein motif:SignalP:2.0"
FT   CDS_pept        576794..577750
FT                   /transl_table=11
FT                   /gene="SagB"
FT                   /locus_tag="CBO0487"
FT                   /product="putative cytolysin-associated protein"
FT                   /note="Similar to Streptococcus equisimilis SagB
FT                   SWALL:Q93SL4 (EMBL:AY033399) (316 aa) fasta scores: E():
FT                   5.8e-45, 44.17 38d in 292 aa"
FT                   /db_xref="GOA:A5HZ32"
FT                   /db_xref="InterPro:IPR000415"
FT                   /db_xref="InterPro:IPR020051"
FT                   /db_xref="InterPro:IPR029479"
FT                   /db_xref="UniProtKB/TrEMBL:A5HZ32"
FT                   /protein_id="CAL82041.1"
FT                   /translation="MLLKNLKKQKVKKQRNTDIGNKMLVHFNTQYSSISPYVDSTVIKT
FT                   PDTIIKGSLYSKDNRFLSEEYLLNYRTNNDNLGFRMGVSSFFQKDAALTFVNLDMEEDG
FT                   QNVIELPPSKNIRVGLSTAIKSRRSVRGYSSKSMSLNDVANIFYYTQGICDEVEPYNLE
FT                   GNKKKIKLRANPSAGGLYPIQLYVYMKNIKDLKDGIYTYYPYSHGLKPIEVNKELLKVD
FT                   NFAEFGVLNAENANLIVFYVYNFLKNSRKYGDAGFSYALIETGEMAQNLQLVSTALGYG
FT                   ACDIGGYEKQYIEEVLDIDGVLKHVVHMTVVGWEQGD"
FT   misc_feature    577163..577732
FT                   /note="Pfam match to entry PF00881
FT                   Nitroreductase,Nitroreductase family, score 34.0, E-value
FT                   3.7e-07"
FT                   /inference="protein motif:Pfam:PF00881"
FT   CDS_pept        577754..578836
FT                   /transl_table=11
FT                   /gene="sagC"
FT                   /locus_tag="CBO0488"
FT                   /pro