(data stored in ACNUC13479 zone)

SWISSPROT: A0A1P8BHF6_ARATH

ID   A0A1P8BHF6_ARATH        Unreviewed;       365 AA.
AC   A0A1P8BHF6;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   08-MAY-2019, entry version 13.
DE   SubName: Full=2-oxoglutarate-dependent dioxygenase family protein {ECO:0000313|EMBL:ANM71031.1};
GN   OrderedLocusNames=At5g01780 {ECO:0000313|EMBL:ANM71031.1};
GN   ORFNames=T20L15.50 {ECO:0000313|EMBL:ANM71031.1}, T20L15_50
GN   {ECO:0000313|EMBL:ANM71031.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM71031.1, ECO:0000313|Proteomes:UP000006548};
RN   [1] {ECO:0000313|EMBL:ANM71031.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana
RT   reference genome.";
RL   Plant J. 89:789-804(2017).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002688; ANM71031.1; -; Genomic_DNA.
DR   RefSeq; NP_001332591.1; NM_001342623.1.
DR   SMR; A0A1P8BHF6; -.
DR   EnsemblPlants; AT5G01780.5; AT5G01780.5; AT5G01780.
DR   GeneID; 831672; -.
DR   Gramene; AT5G01780.5; AT5G01780.5; AT5G01780.
DR   OrthoDB; 1045321at2759; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; A0A1P8BHF6; baseline and differential.
DR   GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.120.590; -; 1.
DR   InterPro; IPR004574; Alkb.
DR   InterPro; IPR027450; AlkB-like.
DR   InterPro; IPR037151; AlkB-like_sf.
DR   PANTHER; PTHR16557; PTHR16557; 1.
DR   Pfam; PF13532; 2OG-FeII_Oxy_2; 1.
PE   4: Predicted;
DR   PRODOM; A0A1P8BHF6.
DR   SWISS-2DPAGE; A0A1P8BHF6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Dioxygenase {ECO:0000313|EMBL:ANM71031.1};
KW   Oxidoreductase {ECO:0000313|EMBL:ANM71031.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT   DOMAIN      225    351       2OG-FeII_Oxy_2. {ECO:0000259|Pfam:
FT                                PF13532}.
SQ   SEQUENCE   365 AA;  40944 MW;  492BD83624866D89 CRC64;
     MLNSIHRSFH LTSRHQIVLR LCSPSASRTI MSSSPHSPIP KTHTASLDSL NDYEEQFPPL
     TGGSKTKKFY LGSTNPSTPC QSSQLQNWTS GKDALSLQRN LGCKNRRRRR ASRFLHEESN
     GTTFEVGAGI GSPTSMVHFD STNPSSSSKS SQSQNLKIRK VRNHRNSGFK SRDQSPQRIK
     DPPPFDICSS VLERNDTSIK DWILADETNR ETVEVSNKHK VIRPGMVLLK DFLTPDIQVD
     IVKTCRELGV KPTGFYQPGY SVGSKLHLQM MCLGRNWDPQ TKYRKNTDID SKAPEIPVTF
     NVLVEKAIRE AHALIDRESG TEDAERILPV MSPDICIVNF YSETGRLGLH QVLCSLTLNL
     FEGFS
//

If you have problems or comments...

PBIL Back to PBIL home page