(data stored in SCRATCH zone)

SWISSPROT: B1VQ41_STRGG

ID   B1VQ41_STRGG            Unreviewed;       534 AA.
AC   B1VQ41;
DT   20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT   20-MAY-2008, sequence version 1.
DT   07-JUN-2017, entry version 57.
DE   SubName: Full=Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAG17142.1};
GN   OrderedLocusNames=SGR_313 {ECO:0000313|EMBL:BAG17142.1};
OS   Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350).
OC   Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC   Streptomyces.
OX   NCBI_TaxID=455632 {ECO:0000313|EMBL:BAG17142.1, ECO:0000313|Proteomes:UP000001685};
RN   [1] {ECO:0000313|EMBL:BAG17142.1, ECO:0000313|Proteomes:UP000001685}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 4626 / NBRC 13350 {ECO:0000313|Proteomes:UP000001685};
RX   PubMed=18375553; DOI=10.1128/JB.00204-08;
RA   Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H.,
RA   Yamashita A., Hattori M., Horinouchi S.;
RT   "Genome sequence of the streptomycin-producing microorganism
RT   Streptomyces griseus IFO 13350.";
RL   J. Bacteriol. 190:4050-4060(2008).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; AP009493; BAG17142.1; -; Genomic_DNA.
DR   RefSeq; WP_012377695.1; NC_010572.1.
DR   ProteinModelPortal; B1VQ41; -.
DR   STRING; 455632.SGR_313; -.
DR   EnsemblBacteria; BAG17142; BAG17142; SGR_313.
DR   GeneID; 6209404; -.
DR   KEGG; sgr:SGR_313; -.
DR   PATRIC; fig|455632.4.peg.293; -.
DR   eggNOG; ENOG4107G9M; Bacteria.
DR   eggNOG; ENOG410ZNTK; LUCA.
DR   OMA; WWLVEAG; -.
DR   Proteomes; UP000001685; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.40.33.10; -; 1.
DR   InterPro; IPR014044; CAP_domain.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00188; CAP; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   SUPFAM; SSF55797; SSF55797; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; B1VQ41.
DR   SWISS-2DPAGE; B1VQ41.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001685};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001685};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       24     91       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      417    531       SCP. {ECO:0000259|Pfam:PF00188}.
SQ   SEQUENCE   534 AA;  56328 MW;  F8687AD6875427F9 CRC64;
     MGKDHPTALI TAAQGGDQQA KDQLVSAYLP LLYNVVGRAL DGHADVDDVV QETVLRMLRG
     LPELRDPERF RSWLVAIAMN EIRTHWRDRQ SGAIPADRLD TAYDLPDPRA DFVEVTILEL
     GLTGQRRQVA EATRWLDEDD RALLSLWWLE TAGHLSRAEV AAALELSPQH TAVRVQRMKA
     QLEAARVVVG ALAAEPPCVL LEDIAAGWDG VPSALWRKRL ARHARECTVC SGYRSGLVPA
     EGLLVGLALV PVAAAGAGAA PELLTTAAHL QAPGPDPHGA GAGRAERRRV QARRRRRNSA
     IAAVVAVAAL GTGGTAVHLY TDGDGQDATT VTADAPAPRS QAPTSASPTS SPSLSPTPTS
     PPSPSASPSP SPSRTPKAKP KTSTPVPPAP TTAPAPDPDP PAPAPQAPAG TAGQVTDLVN
     AERAKEGCGP VTVNDQLNTA AQRHSADMEA NDYFSHTSQD GRDPGDRITA AGYRWSTYGE
     NIAKGQQTPA DVMRSWMDSP GHRANILNCS FKEIGVGKQN SGGGPVWTQV FGAR
//

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