(data stored in SCRATCH zone)

SWISSPROT: B1YE98_EXIS2

ID   B1YE98_EXIS2            Unreviewed;       312 AA.
AC   B1YE98;
DT   20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT   20-MAY-2008, sequence version 1.
DT   11-DEC-2019, entry version 72.
DE   SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ACB60600.1};
GN   OrderedLocusNames=Exig_0256 {ECO:0000313|EMBL:ACB59742.1}, Exig_0328
GN   {ECO:0000313|EMBL:ACB59813.1}, Exig_0984
GN   {ECO:0000313|EMBL:ACB60464.1}, Exig_1121
GN   {ECO:0000313|EMBL:ACB60600.1}, Exig_1129
GN   {ECO:0000313|EMBL:ACB60608.1}, Exig_2062
GN   {ECO:0000313|EMBL:ACB61514.1};
OS   Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15).
OC   Bacteria; Firmicutes; Bacilli; Bacillales;
OC   Bacillales Family XII. Incertae Sedis; Exiguobacterium.
OX   NCBI_TaxID=262543 {ECO:0000313|EMBL:ACB60600.1, ECO:0000313|Proteomes:UP000001681};
RN   [1] {ECO:0000313|EMBL:ACB60600.1, ECO:0000313|Proteomes:UP000001681}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=255-15 {ECO:0000313|EMBL:ACB60600.1}, and DSM 17290 / JCM 13490
RC   / 255-15 {ECO:0000313|Proteomes:UP000001681};
RX   PubMed=16489412; DOI=10.1007/s00792-005-0497-5;
RA   Rodrigues D.F., Goris J., Vishnivetskaya T., Gilichinsky D.,
RA   Thomashow M.F., Tiedje J.M.;
RT   "Characterization of Exiguobacterium isolates from the Siberian permafrost.
RT   Description of Exiguobacterium sibiricum sp. nov.";
RL   Extremophiles 10:285-294(2006).
RN   [2] {ECO:0000313|EMBL:ACB60600.1, ECO:0000313|Proteomes:UP000001681}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=255-15 {ECO:0000313|EMBL:ACB60600.1}, and DSM 17290 / JCM 13490
RC   / 255-15 {ECO:0000313|Proteomes:UP000001681};
RX   PubMed=19019206; DOI=10.1186/1471-2164-9-547;
RA   Rodrigues D.F., Ivanova N., He Z., Huebner M., Zhou J., Tiedje J.M.;
RT   "Architecture of thermal adaptation in an Exiguobacterium sibiricum strain
RT   isolated from 3 million year old permafrost: a genome and transcriptome
RT   approach.";
RL   BMC Genomics 9:547-547(2008).
RN   [3] {ECO:0000313|Proteomes:UP000001681}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17290 / JCM 13490 / 255-15
RC   {ECO:0000313|Proteomes:UP000001681};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C.,
RA   Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F.,
RA   Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T.,
RA   Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.;
RT   "Complete sequence of chromosome of Exiguobacterium sibiricum 255-15.";
RL   Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001022; ACB59742.1; -; Genomic_DNA.
DR   EMBL; CP001022; ACB59813.1; -; Genomic_DNA.
DR   EMBL; CP001022; ACB60464.1; -; Genomic_DNA.
DR   EMBL; CP001022; ACB60600.1; -; Genomic_DNA.
DR   EMBL; CP001022; ACB60608.1; -; Genomic_DNA.
DR   EMBL; CP001022; ACB61514.1; -; Genomic_DNA.
DR   RefSeq; WP_012369167.1; NC_010556.1.
DR   STRING; 262543.Exig_2062; -.
DR   EnsemblBacteria; ACB59742; ACB59742; Exig_0256.
DR   EnsemblBacteria; ACB59813; ACB59813; Exig_0328.
DR   EnsemblBacteria; ACB60464; ACB60464; Exig_0984.
DR   EnsemblBacteria; ACB60600; ACB60600; Exig_1121.
DR   EnsemblBacteria; ACB60608; ACB60608; Exig_1129.
DR   EnsemblBacteria; ACB61514; ACB61514; Exig_2062.
DR   KEGG; esi:Exig_0256; -.
DR   KEGG; esi:Exig_0328; -.
DR   KEGG; esi:Exig_0984; -.
DR   KEGG; esi:Exig_1121; -.
DR   KEGG; esi:Exig_1129; -.
DR   KEGG; esi:Exig_2062; -.
DR   eggNOG; ENOG4105F9F; Bacteria.
DR   eggNOG; COG2826; LUCA.
DR   HOGENOM; HOG000114768; -.
DR   KO; K07482; -.
DR   OMA; HWEMDLV; -.
DR   OrthoDB; 1780129at2; -.
DR   BioCyc; ESIB262543:GHBP-306-MONOMER; -.
DR   Proteomes; UP000001681; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR025246; IS30-like_HTH.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR001598; Transposase_IS30_CS.
DR   Pfam; PF13936; HTH_38; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS01043; TRANSPOSASE_IS30; 1.
PE   4: Predicted;
FT   DOMAIN          144..308
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
DR   PRODOM; B1YE98.
DR   SWISS-2DPAGE; B1YE98.
SQ   SEQUENCE   312 AA;  35852 MW;  88F7CD47E5922B55 CRC64;
     MSYIHLTISE RVKIETYLEL GFSVRKIAGR LGRQPSTISR ELKRNPHYDS SHADQRYVER
     KKKCGARTKF TLEKGICILE KLRETWSPEQ IAGRLFQEEG LSFKTIYRWI YSGLVEADSG
     LLRQKGKRQK PRETRGRFNV GLPISKRPSD VKGRQTFGHW ELDTVVSGRG TSKACVATFV
     ERKSRFYLAV PMENRSAQSM ESAIQALHLS FPLGTFQTAT TDRGKEFSCH ERIRDTLGLP
     MYFADPYSSW QRGSNENANG LLREFFPKGT DFGKVSRSEI AQALAWINGR PRKCLNWKTA
     YEVFTEEVLH LI
//

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