(data stored in SCRATCH zone)

SWISSPROT: B2JKY2_PARP8

ID   B2JKY2_PARP8            Unreviewed;       247 AA.
AC   B2JKY2;
DT   10-JUN-2008, integrated into UniProtKB/TrEMBL.
DT   10-JUN-2008, sequence version 1.
DT   08-MAY-2019, entry version 65.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACC72511.1};
GN   OrderedLocusNames=Bphy_3356 {ECO:0000313|EMBL:ACC72511.1};
OS   Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 /
OS   STM815) (Burkholderia phymatum).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=391038 {ECO:0000313|EMBL:ACC72511.1, ECO:0000313|Proteomes:UP000001192};
RN   [1] {ECO:0000313|Proteomes:UP000001192}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17167 / CIP 108236 / LMG 21445 / STM815
RC   {ECO:0000313|Proteomes:UP000001192};
RX   PubMed=25197461; DOI=10.4056/sigs.4861021;
RA   Moulin L., Klonowska A., Caroline B., Booth K., Vriezen J.A.,
RA   Melkonian R., James E.K., Young J.P., Bena G., Hauser L., Land M.,
RA   Kyrpides N., Bruce D., Chain P., Copeland A., Pitluck S., Woyke T.,
RA   Lizotte-Waniewski M., Bristow J., Riley M.;
RT   "Complete genome sequence of Burkholderia phymatum STM815(T), a broad
RT   host range and efficient nitrogen-fixing symbiont of Mimosa species.";
RL   Stand. Genomic Sci. 9:763-774(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001044; ACC72511.1; -; Genomic_DNA.
DR   RefSeq; WP_012402684.1; NC_010623.1.
DR   STRING; 391038.Bphy_3356; -.
DR   EnsemblBacteria; ACC72511; ACC72511; Bphy_3356.
DR   GeneID; 27743041; -.
DR   KEGG; bph:Bphy_3356; -.
DR   eggNOG; ENOG4108Z2Y; Bacteria.
DR   eggNOG; COG1309; LUCA.
DR   HOGENOM; HOG000267766; -.
DR   OMA; PAMLHYY; -.
DR   OrthoDB; 2089619at2; -.
DR   BioCyc; BPHY391038:G1GBS-3452-MONOMER; -.
DR   Proteomes; UP000001192; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IEA:InterPro.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   InterPro; IPR013573; Tscrpt_reg_YcdC_C.
DR   Pfam; PF08362; TetR_C_3; 1.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; B2JKY2.
DR   SWISS-2DPAGE; B2JKY2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001192};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001192};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       52    112       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     75     94       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   247 AA;  27018 MW;  024F0777FF8886F6 CRC64;
     MARQAQTGSK AGSKAGSDRT DQPGGVEEAG ARARPEPAAR RPGRPSGSGR GPEQRARLLD
     AALALFARQG IVDTTLGQVA REAGFTPAMM HYYFKTRDQL LDVLIDERFL PLRARLGGSF
     QAHPDDPVAA ITLLAQRLVE VAGHYPWFPP LWIREVISEG GLLKLRMHER FGDANQKNGI
     AYIEKWQRDG KINAALEPSL VFLSVIGLTI LPLATSSMWR NDPARRKLTA DDIARHAVAL
     LTQGVAR
//

If you have problems or comments...

PBIL Back to PBIL home page