(data stored in SCRATCH zone)

SWISSPROT: B2JLN5_PARP8

ID   B2JLN5_PARP8            Unreviewed;       187 AA.
AC   B2JLN5;
DT   10-JUN-2008, integrated into UniProtKB/TrEMBL.
DT   10-JUN-2008, sequence version 1.
DT   08-MAY-2019, entry version 65.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACC72668.1};
GN   OrderedLocusNames=Bphy_3524 {ECO:0000313|EMBL:ACC72668.1};
OS   Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 /
OS   STM815) (Burkholderia phymatum).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=391038 {ECO:0000313|EMBL:ACC72668.1, ECO:0000313|Proteomes:UP000001192};
RN   [1] {ECO:0000313|Proteomes:UP000001192}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17167 / CIP 108236 / LMG 21445 / STM815
RC   {ECO:0000313|Proteomes:UP000001192};
RX   PubMed=25197461; DOI=10.4056/sigs.4861021;
RA   Moulin L., Klonowska A., Caroline B., Booth K., Vriezen J.A.,
RA   Melkonian R., James E.K., Young J.P., Bena G., Hauser L., Land M.,
RA   Kyrpides N., Bruce D., Chain P., Copeland A., Pitluck S., Woyke T.,
RA   Lizotte-Waniewski M., Bristow J., Riley M.;
RT   "Complete genome sequence of Burkholderia phymatum STM815(T), a broad
RT   host range and efficient nitrogen-fixing symbiont of Mimosa species.";
RL   Stand. Genomic Sci. 9:763-774(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001044; ACC72668.1; -; Genomic_DNA.
DR   RefSeq; WP_012402841.1; NC_010623.1.
DR   STRING; 391038.Bphy_3524; -.
DR   EnsemblBacteria; ACC72668; ACC72668; Bphy_3524.
DR   GeneID; 27743197; -.
DR   KEGG; bph:Bphy_3524; -.
DR   eggNOG; ENOG4108XUU; Bacteria.
DR   eggNOG; ENOG4111IS7; LUCA.
DR   HOGENOM; HOG000221648; -.
DR   OMA; MRIVEAC; -.
DR   OrthoDB; 2047542at2; -.
DR   BioCyc; BPHY391038:G1GBS-3622-MONOMER; -.
DR   Proteomes; UP000001192; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; B2JLN5.
DR   SWISS-2DPAGE; B2JLN5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001192};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001192};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       13     73       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     36     55       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   187 AA;  21360 MW;  DC05F728C419AC30 CRC64;
     MKPERLSHAR RKEQTRERLY GAARTMFLEK GFAATSVEDI VEAAGYTRGA FYSNFRSKQD
     LLTELLRRDA DEAQADLQAI FQEEGTPEHA TARAIANFVR SYRERECFPL WVEAYLLARR
     DRAFQERVHA LRHEKLLQIS AHIQTLLTDC DNALPPRADA LALGFVSLCE GMQLFSLCYP
     PNATDHA
//

If you have problems or comments...

PBIL Back to PBIL home page