(data stored in SCRATCH zone)

SWISSPROT: B2JMJ4_PARP8

ID   B2JMJ4_PARP8            Unreviewed;       175 AA.
AC   B2JMJ4;
DT   10-JUN-2008, integrated into UniProtKB/TrEMBL.
DT   10-JUN-2008, sequence version 1.
DT   16-JAN-2019, entry version 54.
DE   RecName: Full=Endolytic peptidoglycan transglycosylase RlpA {ECO:0000256|HAMAP-Rule:MF_02071};
DE            EC=4.2.2.- {ECO:0000256|HAMAP-Rule:MF_02071};
DE   Flags: Precursor;
GN   Name=rlpA {ECO:0000256|HAMAP-Rule:MF_02071};
GN   OrderedLocusNames=Bphy_3653 {ECO:0000313|EMBL:ACC72788.1};
OS   Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 /
OS   STM815) (Burkholderia phymatum).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=391038 {ECO:0000313|EMBL:ACC72788.1, ECO:0000313|Proteomes:UP000001192};
RN   [1] {ECO:0000313|Proteomes:UP000001192}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17167 / CIP 108236 / LMG 21445 / STM815
RC   {ECO:0000313|Proteomes:UP000001192};
RX   PubMed=25197461; DOI=10.4056/sigs.4861021;
RA   Moulin L., Klonowska A., Caroline B., Booth K., Vriezen J.A.,
RA   Melkonian R., James E.K., Young J.P., Bena G., Hauser L., Land M.,
RA   Kyrpides N., Bruce D., Chain P., Copeland A., Pitluck S., Woyke T.,
RA   Lizotte-Waniewski M., Bristow J., Riley M.;
RT   "Complete genome sequence of Burkholderia phymatum STM815(T), a broad
RT   host range and efficient nitrogen-fixing symbiont of Mimosa species.";
RL   Stand. Genomic Sci. 9:763-774(2014).
CC   -!- FUNCTION: Lytic transglycosylase with a strong preference for
CC       naked glycan strands that lack stem peptides. {ECO:0000256|HAMAP-
CC       Rule:MF_02071}.
CC   -!- SIMILARITY: Belongs to the RlpA family. {ECO:0000256|HAMAP-
CC       Rule:MF_02071, ECO:0000256|RuleBase:RU003495}.
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DR   EMBL; CP001044; ACC72788.1; -; Genomic_DNA.
DR   RefSeq; WP_012402961.1; NC_010623.1.
DR   STRING; 391038.Bphy_3653; -.
DR   EnsemblBacteria; ACC72788; ACC72788; Bphy_3653.
DR   GeneID; 27743321; -.
DR   KEGG; bph:Bphy_3653; -.
DR   eggNOG; ENOG4105K6T; Bacteria.
DR   eggNOG; COG0797; LUCA.
DR   HOGENOM; HOG000254768; -.
DR   KO; K03642; -.
DR   OMA; VKIEAYN; -.
DR   OrthoDB; 2027419at2; -.
DR   BioCyc; BPHY391038:G1GBS-3749-MONOMER; -.
DR   Proteomes; UP000001192; Chromosome 2.
DR   GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR   GO; GO:0008932; F:lytic endotransglycosylase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0000270; P:peptidoglycan metabolic process; IEA:UniProtKB-UniRule.
DR   Gene3D; 2.40.40.10; -; 1.
DR   HAMAP; MF_02071; RlpA; 1.
DR   InterPro; IPR034718; RlpA.
DR   InterPro; IPR009009; RlpA-like_DPBB.
DR   InterPro; IPR036908; RlpA-like_sf.
DR   InterPro; IPR012997; RplA.
DR   Pfam; PF03330; DPBB_1; 1.
DR   SUPFAM; SSF50685; SSF50685; 1.
DR   TIGRFAMs; TIGR00413; rlpA; 1.
PE   3: Inferred from homology;
DR   PRODOM; B2JMJ4.
DR   SWISS-2DPAGE; B2JMJ4.
KW   Cell wall biogenesis/degradation {ECO:0000256|HAMAP-Rule:MF_02071};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001192};
KW   Lipoprotein {ECO:0000313|EMBL:ACC72788.1};
KW   Lyase {ECO:0000256|HAMAP-Rule:MF_02071};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001192};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_02071}.
FT   SIGNAL        1     20       {ECO:0000256|HAMAP-Rule:MF_02071}.
FT   CHAIN        21    175       Endolytic peptidoglycan transglycosylase
FT                                RlpA. {ECO:0000256|HAMAP-Rule:MF_02071}.
FT                                /FTId=PRO_5009990812.
FT   DOMAIN       68    156       DPBB_1. {ECO:0000259|Pfam:PF03330}.
SQ   SEQUENCE   175 AA;  18700 MW;  B4D148A413FB0EA3 CRC64;
     MSSLRIVGLL AIFGLCTGCA QIHQELQASN PTNTVAMPSK LAVTDGVSDE TPLTSGHIAV
     QPKSGALQTG YASWYARKFQ GRRTASGERY DNRLLTAAHR TLPLGSYVRV TSLATEKSVV
     VRVNDRGPFI KGRIIDLSLA AASELGLTRS PSMQVELQRV EKAANSRALS DGSES
//

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