(data stored in SCRATCH zone)

SWISSPROT: B2TE02_PARPJ

ID   B2TE02_PARPJ            Unreviewed;       106 AA.
AC   B2TE02;
DT   01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT   01-JUL-2008, sequence version 1.
DT   08-MAY-2019, entry version 77.
DE   RecName: Full=Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00343080};
GN   Name=flhD {ECO:0000256|HAMAP-Rule:MF_00725};
GN   OrderedLocusNames=Bphyt_4544 {ECO:0000313|EMBL:ACD18917.1};
OS   Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
OS   (Burkholderia phytofirmans).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=398527 {ECO:0000313|EMBL:ACD18917.1, ECO:0000313|Proteomes:UP000001739};
RN   [1] {ECO:0000313|EMBL:ACD18917.1, ECO:0000313|Proteomes:UP000001739}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17436 / LMG 22146 / PsJN
RC   {ECO:0000313|Proteomes:UP000001739};
RX   PubMed=21551308; DOI=10.1128/JB.05055-11;
RA   Weilharter A., Mitter B., Shin M.V., Chain P.S., Nowak J.,
RA   Sessitsch A.;
RT   "Complete genome sequence of the plant growth-promoting endophyte
RT   Burkholderia phytofirmans strain PsJN.";
RL   J. Bacteriol. 193:3383-3384(2011).
CC   -!- FUNCTION: Functions in complex with FlhC as a master
CC       transcriptional regulator that regulates transcription of several
CC       flagellar and non-flagellar operons by binding to their promoter
CC       region. Activates expression of class 2 flagellar genes, including
CC       fliA, which is a flagellum-specific sigma factor that turns on the
CC       class 3 genes. Also regulates genes whose products function in a
CC       variety of physiological pathways. {ECO:0000256|HAMAP-
CC       Rule:MF_00725, ECO:0000256|SAAS:SAAS00343075}.
CC   -!- SUBUNIT: Homodimer; disulfide-linked. Forms a heterohexamer
CC       composed of two FlhC and four FlhD subunits. Each FlhC binds a
CC       FlhD dimer, forming a heterotrimer, and a hexamer assembles by
CC       dimerization of two heterotrimers. {ECO:0000256|HAMAP-
CC       Rule:MF_00725, ECO:0000256|SAAS:SAAS00343087}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00725,
CC       ECO:0000256|SAAS:SAAS00343081}.
CC   -!- DOMAIN: The C-terminal region contains a putative helix-turn-helix
CC       (HTH) motif, suggesting that this region may bind DNA.
CC       {ECO:0000256|HAMAP-Rule:MF_00725}.
CC   -!- SIMILARITY: Belongs to the FlhD family. {ECO:0000256|HAMAP-
CC       Rule:MF_00725, ECO:0000256|SAAS:SAAS00539353}.
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DR   EMBL; CP001053; ACD18917.1; -; Genomic_DNA.
DR   RefSeq; WP_007177882.1; NC_010676.1.
DR   STRING; 398527.Bphyt_4544; -.
DR   EnsemblBacteria; ACD18917; ACD18917; Bphyt_4544.
DR   GeneID; 4008653; -.
DR   KEGG; bpy:Bphyt_4544; -.
DR   PATRIC; fig|266265.5.peg.6922; -.
DR   eggNOG; ENOG4105GEH; Bacteria.
DR   eggNOG; ENOG4111JRF; LUCA.
DR   HOGENOM; HOG000254676; -.
DR   KO; K02403; -.
DR   OMA; HNTPRKA; -.
DR   OrthoDB; 2022460at2; -.
DR   Proteomes; UP000001739; Chromosome 2.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0044780; P:bacterial-type flagellum assembly; IEA:InterPro.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR   GO; GO:1902208; P:regulation of bacterial-type flagellum assembly; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.4000.10; -; 1.
DR   HAMAP; MF_00725; FlhD; 1.
DR   InterPro; IPR023559; Flagellar_FlhD.
DR   InterPro; IPR036194; FlhD_sf.
DR   Pfam; PF05247; FlhD; 1.
DR   ProDom; PD015582; Flagellar_transcriptional_act; 1.
DR   SUPFAM; SSF63592; SSF63592; 1.
PE   3: Inferred from homology;
DR   PRODOM; B2TE02.
DR   SWISS-2DPAGE; B2TE02.
KW   Activator {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421674};
KW   Bacterial flagellum biogenesis {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421673};
KW   Cell projection {ECO:0000313|EMBL:ACD18917.1};
KW   Cilium {ECO:0000313|EMBL:ACD18917.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001739};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421676};
KW   Disulfide bond {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421660};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00011628};
KW   Flagellum {ECO:0000313|EMBL:ACD18917.1};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421668};
KW   Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00725,
KW   ECO:0000256|SAAS:SAAS00421664}.
FT   DISULFID     66     66       Interchain. {ECO:0000256|HAMAP-Rule:
FT                                MF_00725}.
SQ   SEQUENCE   106 AA;  11634 MW;  4B44BEE598E49ADB CRC64;
     MDRSSETLDS IREINLSYIM LAQRMLREDK PVGMFRLGLS SELADLLAGL SLAQIVKLAA
     SDQLLCFFRF NDHSMLSALT QTTKHTAVAP THAAILLAGQ PAEQFA
//

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