(data stored in SCRATCH zone)

SWISSPROT: B2TF45_PARPJ

ID   B2TF45_PARPJ            Unreviewed;       184 AA.
AC   B2TF45;
DT   01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT   01-JUL-2008, sequence version 1.
DT   08-MAY-2019, entry version 65.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACD18712.1};
GN   OrderedLocusNames=Bphyt_4335 {ECO:0000313|EMBL:ACD18712.1};
OS   Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
OS   (Burkholderia phytofirmans).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=398527 {ECO:0000313|EMBL:ACD18712.1, ECO:0000313|Proteomes:UP000001739};
RN   [1] {ECO:0000313|EMBL:ACD18712.1, ECO:0000313|Proteomes:UP000001739}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17436 / LMG 22146 / PsJN
RC   {ECO:0000313|Proteomes:UP000001739};
RX   PubMed=21551308; DOI=10.1128/JB.05055-11;
RA   Weilharter A., Mitter B., Shin M.V., Chain P.S., Nowak J.,
RA   Sessitsch A.;
RT   "Complete genome sequence of the plant growth-promoting endophyte
RT   Burkholderia phytofirmans strain PsJN.";
RL   J. Bacteriol. 193:3383-3384(2011).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; CP001053; ACD18712.1; -; Genomic_DNA.
DR   RefSeq; WP_012426228.1; NC_010676.1.
DR   STRING; 398527.Bphyt_4335; -.
DR   EnsemblBacteria; ACD18712; ACD18712; Bphyt_4335.
DR   KEGG; bpy:Bphyt_4335; -.
DR   eggNOG; ENOG4107YVY; Bacteria.
DR   eggNOG; ENOG410ZWVI; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   OMA; WLFRAAR; -.
DR   OrthoDB; 1914729at2; -.
DR   BioCyc; BPHY398527:GJEX-4326-MONOMER; -.
DR   Proteomes; UP000001739; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; B2TF45.
DR   SWISS-2DPAGE; B2TF45.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001739};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       14     77       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      119    159       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   184 AA;  21024 MW;  5A40ACD00BAD0419 CRC64;
     MTERDTDITA TVVRERTRLV NFIRRRIRDP DDAEDILQDV FHEFVQAYRL PAPIEQASAW
     LFRAARNRIV DRFRKKKEQP LADLSASGDD ADSEYRLDLD LPAHDAGPEA LYARALLLKA
     LQDALDELPA NQREVFVAHE LEGRSFKEMA AESGVTLNTL LARKRYAVLH LRARLQAICD
     ELGI
//

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