(data stored in SCRATCH zone)

SWISSPROT: A0A384KUD0_PLAKH

ID   A0A384KUD0_PLAKH        Unreviewed;       512 AA.
AC   A0A384KUD0; A0A1A7W231; B3L728;
DT   07-NOV-2018, integrated into UniProtKB/TrEMBL.
DT   07-NOV-2018, sequence version 1.
DT   11-DEC-2019, entry version 10.
DE   SubName: Full=CUGBP Elav-like family member 1, putative {ECO:0000313|EMBL:VVS78422.1};
DE   SubName: Full=RNA binding protein, putative {ECO:0000313|EMBL:CAQ40701.1};
GN   ORFNames=PKH_111140 {ECO:0000313|EMBL:CAQ40701.1}, PKNH_1111900
GN   {ECO:0000313|EMBL:VVS78422.1};
OS   Plasmodium knowlesi (strain H).
OC   Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
OX   NCBI_TaxID=5851 {ECO:0000313|EMBL:CAQ40701.1, ECO:0000313|Proteomes:UP000031513};
RN   [1] {ECO:0000313|EMBL:CAQ40701.1, ECO:0000313|Proteomes:UP000031513}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=H {ECO:0000313|EMBL:CAQ40701.1,
RC   ECO:0000313|Proteomes:UP000031513};
RA   Pain A., Boehme U., Berry A.E., Mungall K., Finn R., Jackson A.P.,
RA   Mourier T., Mistry J., Pasini E.M., Aslett M., Balasubrammaniam S.,
RA   Borgwardt K., Brooks K., Carret C., Carver T.J., Cherevach I.,
RA   Chillingworth T., Clarke T.G., Galinski M.R., Hall N., Harper D.,
RA   Harris D., Hauser H., Ivens A., Janssen C.S., Keane T., Larke N., Lapp S.,
RA   Marti M., Moule S., Meyer I.M., Ormond D., Peters N., Sanders M.,
RA   Sanders S., Sergeant T.J., Simmonds M., Smith F., Squares R., Thurston S.,
RA   Tivey A.R., Walker D., White B., Zuiderwijk E., Churcher C., Quail M.A.,
RA   Cowman A.F., Turner C.M.R., Rajandream M.A., Kocken C.H.M., Thomas A.W.,
RA   Newbold C.I., Barrell B.G., Berriman M.;
RT   "The genome of Plasmodium knowlesi strain H, a zoonotic malaria parasite
RT   with host range from monkey to man.";
RL   Nature 455:799-803(2008).
RN   [2] {ECO:0000313|EMBL:VVS78422.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=H {ECO:0000313|EMBL:VVS78422.1};
RG   Pathogen Informatics;
RL   Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AM910993; CAQ40701.1; -; Genomic_DNA.
DR   EMBL; LR701171; VVS78422.1; -; Genomic_DNA.
DR   RefSeq; XP_002261296.1; XM_002261260.1.
DR   GeneID; 7321560; -.
DR   KEGG; pkn:PKH_111140; -.
DR   HOGENOM; HOG000281356; -.
DR   OMA; DHCSLNA; -.
DR   Proteomes; UP000031513; Chromosome 11.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd00201; WW; 1.
DR   Gene3D; 3.30.70.330; -; 3.
DR   InterPro; IPR002343; Hud_Sxl_RNA.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR001202; WW_dom.
DR   InterPro; IPR036020; WW_dom_sf.
DR   Pfam; PF00076; RRM_1; 3.
DR   Pfam; PF00397; WW; 1.
DR   PRINTS; PR00961; HUDSXLRNA.
DR   SMART; SM00360; RRM; 3.
DR   SMART; SM00456; WW; 1.
DR   SUPFAM; SSF51045; SSF51045; 1.
DR   SUPFAM; SSF54928; SSF54928; 2.
DR   PROSITE; PS50102; RRM; 3.
DR   PROSITE; PS01159; WW_DOMAIN_1; 1.
DR   PROSITE; PS50020; WW_DOMAIN_2; 1.
PE   4: Predicted;
DR   PRODOM; A0A384KUD0.
DR   SWISS-2DPAGE; A0A384KUD0.
KW   Reference proteome {ECO:0000313|Proteomes:UP000031513};
KW   Repeat {ECO:0000256|SAAS:SAAS00469592};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176,
KW   ECO:0000256|SAAS:SAAS00469599}.
FT   DOMAIN          87..168
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          186..267
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          320..347
FT                   /note="WW"
FT                   /evidence="ECO:0000259|PROSITE:PS50020"
FT   DOMAIN          371..449
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          1..71
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..26
FT                   /note="Polar"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        27..71
FT                   /note="Polyampholyte"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   512 AA;  57378 MW;  2DFA53B476B461FD CRC64;
     MDNNENIDLN DNSSDTNTGN YNHGKNENIS EEMDFSKEDN EMDGNSKSSK SKQDNLGKTK
     NASDKDDMNM DYSDHHFPCH PAPPVSIKLF IGRVPKNMEE EQVRPIFEEF GIVKEVVIIR
     DKITNIHKSS AFVKMASISE ADNAIRSLNN QRTLDPQLGS LQVKYASGEI MKLGFPQNIE
     SGVDQAKLFI GSLPKSISEE SVKEMFSPYG SVEEVFIMKD NSTGLGKGCS FVKFAYKEQA
     LYAINSLNGK KTLEGCARPV EVRFAEPKSA KQAQIPMNMQ SMQNSAHGIS SQPHVTSPNN
     INFGNNFGVN NNYPRQVGAW KEYYSGEGRP YYYNEQTNTT QWEMPKEFET LFMGTTHNMH
     NLSDSSGPPG ANLFIFHVPN EWHQTDLIQA FSPFGELLSA RIATEKSTGR NRGFAFVSYE
     NIESAAAAIS QMNGFMALNK KLKVTVKKGE EEEMKKFVSQ NGINSFQQMS RPQKNIPAQP
     NAVAQPNFPP HQNAQPQNFF YSNSNSYRCG PY
//

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