(data stored in ACNUC11299 zone)

SWISSPROT: B5RSM9_DEBHA

ID   B5RSM9_DEBHA            Unreviewed;      1749 AA.
AC   B5RSM9;
DT   04-NOV-2008, integrated into UniProtKB/TrEMBL.
DT   04-NOV-2008, sequence version 1.
DT   07-JUN-2017, entry version 47.
DE   RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279};
DE            EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};
GN   OrderedLocusNames=DEHA2A13618g {ECO:0000313|EMBL:CAR65414.1};
OS   Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
OS   0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX   NCBI_TaxID=284592 {ECO:0000313|EMBL:CAR65414.1, ECO:0000313|Proteomes:UP000000599};
RN   [1] {ECO:0000313|EMBL:CAR65414.1, ECO:0000313|Proteomes:UP000000599}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968
RC   {ECO:0000313|Proteomes:UP000000599};
RX   PubMed=15229592; DOI=10.1038/nature02579;
RG   Genolevures;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A.,
RA   Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates. {ECO:0000256|RuleBase:RU004279}.
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1). {ECO:0000256|RuleBase:RU004279}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|RuleBase:RU004279}.
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DR   EMBL; CR382133; CAR65414.1; -; Genomic_DNA.
DR   RefSeq; XP_002770038.1; XM_002769992.1.
DR   EnsemblFungi; CAR65414; CAR65414; DEHA2A13618g.
DR   GeneID; 8998046; -.
DR   KEGG; dha:DEHA2A13618g; -.
DR   HOGENOM; HOG000222975; -.
DR   InParanoid; B5RSM9; -.
DR   KO; K03006; -.
DR   OMA; MPDFDPT; -.
DR   OrthoDB; EOG092C01XQ; -.
DR   Proteomes; UP000000599; Chromosome A.
DR   GO; GO:0005829; C:cytosol; IEA:EnsemblFungi.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0000790; C:nuclear chromatin; IEA:EnsemblFungi.
DR   GO; GO:0003677; F:DNA binding; IEA:EnsemblFungi.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 21.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 11.
PE   3: Inferred from homology;
DR   PRODOM; B5RSM9.
DR   SWISS-2DPAGE; B5RSM9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000599};
KW   DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279};
KW   Nucleotidyltransferase {ECO:0000256|RuleBase:RU004279};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000599};
KW   Transcription {ECO:0000256|RuleBase:RU004279};
KW   Transferase {ECO:0000256|RuleBase:RU004279}.
FT   DOMAIN      237    540       RPOLA_N. {ECO:0000259|SMART:SM00663}.
SQ   SEQUENCE   1749 AA;  193855 MW;  0466916C31FF54D0 CRC64;
     MSRQFPYSSA PLRSVKEVQF GLLSPEEVRA ISVAKIEYPE TIDQSTKKPR EAGLNDPRLG
     SIDRNFKCQT CGEDMAECPG HFGHIELTKP VFHIGFIAKI KKVCECVCMH CGKLLLDETN
     LAMSQAIKIR DPKKRFNAVW NLCKAKMICE ADNVTSENDP NWKPDQPNKG GCGHTQPTVR
     RDGLKLWGTW KQNKNFDENE QPERRLLTPS EILSVFKHIN SQDCYRLGFN EDYARPEWML
     ITVLPVPPPP VRPSIAFNDT ARGEDDLTFK LADVLKANIN VQRLEMDGSP QHVISEFEAL
     LQFHVATYMD NDIAGQPQAL QKTGRPIKSI RARLKGKEGR LRGNLMGKRV DFSARTVISG
     DPNLDLDQVG VPISIARTLS YPEIVTPYNI HRLTEYVRNG PNEHPGAKYV IRDTGDRIDL
     RYNKRAGDIA LQYGWKVERH LMDDDPVLFN RQPSLHKMSM MAHRVKVMPY STFRLNLSVT
     SPYNADFDGD EMNLHVPQSQ ETRAELSQIC AVPLQIVSPQ SNKPVMGIVQ DTLCGVRKMT
     LRDNFIEYDQ VMNMLYWIPN WDGVIPPPAI VSPKPLWTGK QLLSMAIPKG IHLQRFDDGK
     NLLSPKDNGM LVVDGEIMFG VVDKKTVGAT GGGLIHTVMR EKGSQVCAQL FSSIQKVVNF
     WLLHNGFSIG IGDTIADSST MRDVTTTIQD AKDKVQEIIL DAQSNKLEPE PGMTLRESFE
     HNVSRVLNQA RDTAGRSAEM NLKDLNNVKQ MVVSGSKGSF INISQMSACV GQQIVEGKRI
     PFGFADRSLP HFTKDDYSPE SKGFVENSYL RGLTPQEFFF HAMAGREGLI DTAVKTAETG
     YIQRRLVKAL EDIMVHYDGS TRNSLGDIIQ FVYGEDGIDG TQVEKQSVDT IPGSDESFEK
     RYRIDVLDPS KSIRESLLES GKEIKGDVKL QKVLDEEYRQ LEADRRYLRD VCFPNGDFNW
     PLPVNLRRII QNAQQIFHNG RHKASDLRLD EVVRGVQDLC TKLLVIRGKT ALTKEAQENA
     TLLFQCLLRS RLATRRVIEE FKLSRISFEW VMGEIETQFQ KSIVHPGEMV GVIAAQSIGE
     PATQMTLNTF HYAGVSSKNV TLGVPRLKEI LNVAKNIKTP ALTVYLEKES AADIEKAKIV
     QSAIEHTTLK NVTSATEIFY DPDPRSTVIE EDYDTVEAYF AIPDEKVEES IEKQSPWLLR
     LELDRAKMLD KQLTMSQVAE KISQNFGEDL FVIWSDDTAD KLIIRCRVVR DPKSLDEDAD
     AEEDQILKRI ESHMLESISL RGIPGITRVF MMQHKVNSPD ITGEFKQSQE WVLETDGVNL
     ADVMAVSGVD SSRTYSNNFI EVLSVLGIEA TRTALFKEIL NVIAFDGSYV NYRHMALLVD
     VMTSRGHLMA ITRHGINRAD TGALMRCSFE ETVEILLEAG SAAELDDCRG ISENVMLGQM
     APLGTGAFDV MVDDKMLQTA PSNIAVTTAA GNETGEYADD GGATPYRDYE MQDDKIQFEE
     GAGFSPIHTA PVSDGSGALT SYGGATSPSP TSPFSYGATS PSFGGVTSPG YGGTSPTYSP
     TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS
     YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT
     SPQYSPTSPQ YSPTSPSYSP TSPSYSPTSP QYSPTSPQYS PTSPQYSPGS PSYSPESESK
     SKDEKKDGN
//

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